fig|6666666.230104.peg.1 CDS JNHN01000001.1 68 3040 2 + 2973 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.2 CDS JNHN01000001.1 3054 4715 3 + 1662 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.3 CDS JNHN01000001.1 4835 6442 2 + 1608 putative xylanase - none -
fig|6666666.230104.peg.4 CDS JNHN01000001.1 6473 8920 2 + 2448 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.5 CDS JNHN01000001.1 9837 9064 -3 - 774 Biotin--protein ligase (EC 6.3.4.9, EC 6.3.4.10, EC 6.3.4.11, EC 6.3.4.15) - none -
fig|6666666.230104.peg.6 CDS JNHN01000001.1 10177 9821 -1 - 357 FIG00898592: hypothetical protein - none -
fig|6666666.230104.peg.7 CDS JNHN01000001.1 10612 10247 -1 - 366 Endonuclease (EC 3.1.-.-) - none -
fig|6666666.230104.peg.8 CDS JNHN01000001.1 12414 10612 -3 - 1803 Carboxyl-terminal protease - none -
fig|6666666.230104.peg.9 CDS JNHN01000001.1 12595 12828 1 + 234 FIG00406074: hypothetical protein - none -
fig|6666666.230104.peg.10 CDS JNHN01000001.1 12848 13288 2 + 441 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing
fig|6666666.230104.peg.11 CDS JNHN01000001.1 13612 13313 -1 - 300 FIG00405557: hypothetical protein - none -
fig|6666666.230104.peg.12 CDS JNHN01000001.1 14387 13680 -2 - 708 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230104.peg.13 CDS JNHN01000001.1 15087 14401 -3 - 687 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230104.peg.14 CDS JNHN01000001.1 15258 19055 3 + 3798 DNA polymerase III alpha subunit (EC 2.7.7.7) CBSS-350688.3.peg.1509;
Inteins
fig|6666666.230104.peg.15 CDS JNHN01000001.1 19222 19536 1 + 315 Thioredoxin - none -
fig|6666666.230104.peg.16 CDS JNHN01000001.1 19655 19987 2 + 333 FIG00403617: hypothetical protein - none -
fig|6666666.230104.peg.17 CDS JNHN01000001.1 20267 20049 -2 - 219 FIG00406966: hypothetical protein - none -
fig|6666666.230104.peg.18 CDS JNHN01000001.1 20740 20315 -1 - 426 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA YjeE
fig|6666666.230104.peg.19 CDS JNHN01000001.1 21566 20754 -2 - 813 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.230104.peg.20 CDS JNHN01000001.1 22045 21617 -1 - 429 FIG00935916: hypothetical protein - none -
fig|6666666.230104.peg.21 CDS JNHN01000001.1 23616 22300 -3 - 1317 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.230104.peg.22 CDS JNHN01000001.1 23794 24183 1 + 390 FIG00413250: hypothetical protein - none -
fig|6666666.230104.peg.23 CDS JNHN01000001.1 24800 24189 -2 - 612 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.230104.peg.24 CDS JNHN01000001.1 25791 24784 -3 - 1008 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.230104.peg.25 CDS JNHN01000001.1 27393 25795 -3 - 1599 Predicted cobalt transporter in Bacteroides_Porphyromonas Coenzyme B12 biosynthesis
fig|6666666.230104.peg.26 CDS JNHN01000001.1 30846 27574 -3 - 3273 putative Tricorn-like protease - none -
fig|6666666.230104.peg.27 CDS JNHN01000001.1 31703 30924 -2 - 780 DnaJ-like protein DjlA - none -
fig|6666666.230104.peg.28 CDS JNHN01000001.1 32473 31856 -1 - 618 Flavodoxin Flavodoxin
fig|6666666.230104.peg.29 CDS JNHN01000001.1 33025 32543 -1 - 483 Transcriptional regulator - none -
fig|6666666.230104.peg.30 CDS JNHN01000001.1 34726 33035 -1 - 1692 Membrane protein - none -
fig|6666666.230104.peg.31 CDS JNHN01000001.1 34890 35792 3 + 903 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.32 CDS JNHN01000001.1 36851 36102 -2 - 750 FIG00417123: hypothetical protein - none -
fig|6666666.230104.peg.33 CDS JNHN01000001.1 37103 37228 2 + 126 hypothetical protein - none -
fig|6666666.230104.peg.34 CDS JNHN01000001.1 37225 37755 1 + 531 FIG00414200: hypothetical protein - none -
fig|6666666.230104.peg.35 CDS JNHN01000001.1 38868 37807 -3 - 1062 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.230104.peg.36 CDS JNHN01000001.1 38904 39062 3 + 159 hypothetical protein - none -
fig|6666666.230104.peg.37 CDS JNHN01000001.1 39067 39489 1 + 423 FIG00404342: hypothetical protein - none -
fig|6666666.230104.peg.38 CDS JNHN01000001.1 39597 42521 3 + 2925 FIG00897756: hypothetical protein - none -
fig|6666666.230104.peg.39 CDS JNHN01000001.1 42783 44222 3 + 1440 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230104.peg.40 CDS JNHN01000001.1 44816 44283 -2 - 534 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-226186.1.peg.3978;
CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.230104.peg.41 CDS JNHN01000001.1 45586 44807 -1 - 780 FIG032012: hypothetical protein CBSS-226186.1.peg.3978
fig|6666666.230104.peg.42 CDS JNHN01000001.1 46219 45605 -1 - 615 FIG036016: hypothetical protein CBSS-226186.1.peg.3978
fig|6666666.230104.peg.43 CDS JNHN01000001.1 46513 47805 1 + 1293 RecD-like DNA helicase Atu2026 DNA repair, bacterial RecBCD pathway
fig|6666666.230104.peg.44 CDS JNHN01000001.1 47882 48691 2 + 810 FIG00410196: hypothetical protein - none -
fig|6666666.230104.peg.45 CDS JNHN01000001.1 51763 49145 -1 - 2619 Alanyl-tRNA synthetase (EC 6.1.1.7) CBSS-226186.1.peg.3994;
Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.230104.peg.46 CDS JNHN01000001.1 51935 52903 2 + 969 Peptidase, family M23 (EC 3.4.24.-) CBSS-226186.1.peg.3994
fig|6666666.230104.peg.47 CDS JNHN01000001.1 52933 53322 1 + 390 Transcriptional regulator - none -
fig|6666666.230104.peg.48 CDS JNHN01000001.1 55598 53340 -2 - 2259 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.230104.peg.49 CDS JNHN01000001.1 56991 55675 -3 - 1317 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Murein Hydrolases
fig|6666666.230104.peg.50 CDS JNHN01000001.1 57802 57023 -1 - 780 FIG00937393: hypothetical protein - none -
fig|6666666.230104.peg.51 CDS JNHN01000001.1 58687 57803 -1 - 885 Chromosome (plasmid) partitioning protein ParB Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.230104.peg.52 CDS JNHN01000001.1 59565 58795 -3 - 771 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.230104.peg.53 CDS JNHN01000001.1 60460 59987 -1 - 474 probable membrane protein NMA1128 - none -
fig|6666666.230104.peg.54 CDS JNHN01000001.1 61942 60506 -1 - 1437 FIG00897336: hypothetical protein - none -
fig|6666666.230104.peg.55 CDS JNHN01000001.1 61949 62068 2 + 120 hypothetical protein - none -
fig|6666666.230104.peg.56 CDS JNHN01000001.1 62100 62864 3 + 765 5-nucleotidase SurE (EC 3.1.3.5) Housecleaning nucleoside triphosphate pyrophosphatases;
Stationary phase repair cluster
fig|6666666.230104.peg.57 CDS JNHN01000001.1 62889 64034 3 + 1146 Lipid-A-disaccharide synthase (EC 2.4.1.182) Llipid A biosynthesis cluster
fig|6666666.230104.peg.58 CDS JNHN01000001.1 64081 64200 1 + 120 hypothetical protein - none -
fig|6666666.230104.peg.59 CDS JNHN01000001.1 64178 64882 2 + 705 FIG00411266: hypothetical protein - none -
fig|6666666.230104.peg.60 CDS JNHN01000001.1 65842 65000 -1 - 843 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230104.peg.61 CDS JNHN01000001.1 66806 65832 -2 - 975 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.230104.peg.62 CDS JNHN01000002.1 640 2 -1 - 639 hypothetical protein - none -
fig|6666666.230104.peg.63 CDS JNHN01000003.1 2416 344 -1 - 2073 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.64 CDS JNHN01000003.1 3611 2448 -2 - 1164 endo-beta-1,4-glucanase (celulase B) - none -
fig|6666666.230104.peg.65 CDS JNHN01000004.1 27 1199 3 + 1173 Thiamin-regulated outer membrane receptor Omr1 Thiamin biosynthesis
fig|6666666.230104.peg.66 CDS JNHN01000004.1 1212 3704 3 + 2493 hypothetical protein - none -
fig|6666666.230104.peg.67 CDS JNHN01000004.1 3802 5091 1 + 1290 putative endonuclease precursor - none -
fig|6666666.230104.peg.68 CDS JNHN01000004.1 5238 6575 3 + 1338 ATP-dependent RNA helicase - none -
fig|6666666.230104.peg.69 CDS JNHN01000004.1 6826 7917 1 + 1092 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.230104.peg.70 CDS JNHN01000004.1 8028 8951 3 + 924 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.230104.peg.71 CDS JNHN01000004.1 9168 10415 3 + 1248 FIG008208: hypothetical protein - none -
fig|6666666.230104.peg.72 CDS JNHN01000004.1 10865 10476 -2 - 390 FIG00404684: hypothetical protein - none -
fig|6666666.230104.peg.73 CDS JNHN01000004.1 11410 10862 -1 - 549 RNA polymerase sigma-54 factor RpoN Transcription initiation, bacterial sigma factors
fig|6666666.230104.peg.74 CDS JNHN01000004.1 11554 11949 1 + 396 hypothetical protein - none -
fig|6666666.230104.peg.75 CDS JNHN01000004.1 12000 12575 3 + 576 Iron-sulfur flavoprotein - none -
fig|6666666.230104.peg.76 CDS JNHN01000004.1 12594 12995 3 + 402 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.230104.peg.77 CDS JNHN01000004.1 13060 13242 1 + 183 FIG00406415: hypothetical protein - none -
fig|6666666.230104.peg.78 CDS JNHN01000004.1 13352 14692 2 + 1341 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230104.peg.79 CDS JNHN01000004.1 15840 14689 -3 - 1152 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.230104.peg.80 CDS JNHN01000004.1 16428 15850 -3 - 579 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.230104.peg.81 CDS JNHN01000004.1 17550 16564 -3 - 987 putative AraC family transcriptional regulatory protein - none -
fig|6666666.230104.peg.82 CDS JNHN01000004.1 17591 18187 2 + 597 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.230104.peg.83 CDS JNHN01000004.1 18345 19469 3 + 1125 Type II restriction enzyme HpaII (EC 3.1.21.4) - none -
fig|6666666.230104.peg.84 CDS JNHN01000004.1 19534 20097 1 + 564 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.230104.peg.85 CDS JNHN01000004.1 22539 20209 -3 - 2331 FIG00413484: hypothetical protein - none -
fig|6666666.230104.peg.86 CDS JNHN01000004.1 23138 22770 -2 - 369 Transcriptional regulator, GntR family - none -
fig|6666666.230104.peg.87 CDS JNHN01000004.1 23936 23142 -2 - 795 FIG00417121: hypothetical protein - none -
fig|6666666.230104.peg.88 CDS JNHN01000004.1 24757 23933 -1 - 825 ABC transporter, ATP-binding protein - none -
fig|6666666.230104.peg.89 CDS JNHN01000004.1 25558 24875 -1 - 684 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.230104.peg.90 CDS JNHN01000004.1 28386 25537 -3 - 2850 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.230104.peg.91 CDS JNHN01000004.1 29056 28418 -1 - 639 Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis Glutathione: Non-redox reactions
fig|6666666.230104.peg.92 CDS JNHN01000004.1 29692 29072 -1 - 621 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.230104.peg.93 CDS JNHN01000004.1 30596 29730 -2 - 867 FIG00936355: hypothetical protein - none -
fig|6666666.230104.peg.94 CDS JNHN01000004.1 30878 30708 -2 - 171 hypothetical protein - none -
fig|6666666.230104.peg.95 CDS JNHN01000004.1 31217 33433 2 + 2217 TonB-dependent outer membrane receptor - none -
fig|6666666.230104.peg.96 CDS JNHN01000004.1 33462 33773 3 + 312 Possible exported heavy-metal binding protein - none -
fig|6666666.230104.peg.97 CDS JNHN01000004.1 33844 35538 1 + 1695 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.230104.peg.98 CDS JNHN01000004.1 36350 35550 -2 - 801 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.99 CDS JNHN01000004.1 39322 36476 -1 - 2847 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.230104.peg.100 CDS JNHN01000004.1 39472 40131 1 + 660 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.230104.peg.101 CDS JNHN01000004.1 40128 40724 3 + 597 Acyl carrier protein phosphodiesterase (EC 3.1.4.14) Fatty Acid Biosynthesis FASII
fig|6666666.230104.peg.102 CDS JNHN01000004.1 41736 40852 -3 - 885 DnaD domain protein - none -
fig|6666666.230104.peg.103 CDS JNHN01000004.1 42124 41777 -1 - 348 FIG00413928: hypothetical protein - none -
fig|6666666.230104.peg.104 CDS JNHN01000004.1 42467 42342 -2 - 126 hypothetical protein - none -
fig|6666666.230104.peg.105 CDS JNHN01000004.1 43270 43824 1 + 555 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230104.peg.106 CDS JNHN01000004.1 43875 44369 3 + 495 UpdZ protein - none -
fig|6666666.230104.peg.107 CDS JNHN01000004.1 44781 47201 3 + 2421 putative polysialic acid transport protein Rhamnose containing glycans
fig|6666666.230104.peg.108 CDS JNHN01000004.1 47209 48336 1 + 1128 putative protein involved in capsular polysaccharide biosynthesis - none -
fig|6666666.230104.peg.109 CDS JNHN01000004.1 48358 49812 1 + 1455 Lipopolysaccharide biosynthesis protein WzxC - none -
fig|6666666.230104.peg.110 CDS JNHN01000004.1 49819 50928 1 + 1110 Nucleotide sugar transaminase - none -
fig|6666666.230104.peg.111 CDS JNHN01000004.1 50950 52137 1 + 1188 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain protein - none -
fig|6666666.230104.peg.112 CDS JNHN01000004.1 52113 53084 3 + 972 hypothetical protein - none -
fig|6666666.230104.peg.113 CDS JNHN01000004.1 53084 53695 2 + 612 hypothetical protein - none -
fig|6666666.230104.peg.114 CDS JNHN01000004.1 53676 54854 3 + 1179 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.230104.peg.115 CDS JNHN01000004.1 54847 56070 1 + 1224 hypothetical protein - none -
fig|6666666.230104.peg.116 CDS JNHN01000004.1 56074 57210 1 + 1137 4-alpha-L-fucosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230104.peg.117 CDS JNHN01000004.1 57182 57844 2 + 663 Acetyltransferase (isoleucine patch superfamily) - none -
fig|6666666.230104.peg.118 CDS JNHN01000004.1 57857 58087 2 + 231 putative acyl carrier protein - none -
fig|6666666.230104.peg.119 CDS JNHN01000004.1 58088 58840 2 + 753 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.230104.peg.120 CDS JNHN01000004.1 58846 59604 1 + 759 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.230104.peg.121 CDS JNHN01000004.1 59629 61014 1 + 1386 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.230104.peg.122 CDS JNHN01000004.1 61029 61268 3 + 240 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230104.peg.123 CDS JNHN01000004.1 61280 62374 2 + 1095 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) - none -
fig|6666666.230104.peg.124 CDS JNHN01000004.1 62443 63516 1 + 1074 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria
fig|6666666.230104.peg.125 CDS JNHN01000004.1 63562 64710 1 + 1149 Capsular polysaccharide synthesis enzyme Cap5F - none -
fig|6666666.230104.peg.126 CDS JNHN01000004.1 64742 65920 2 + 1179 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230104.peg.127 CDS JNHN01000004.1 65944 67131 1 + 1188 Putative glycosyltransferase CBSS-296591.1.peg.2330
fig|6666666.230104.peg.128 CDS JNHN01000004.1 67136 67768 2 + 633 Lipid carrier : UDP-N-acetylgalactosaminyltransferase (EC 2.4.1.-) CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria
fig|6666666.230104.peg.129 CDS JNHN01000004.1 67970 68389 2 + 420 Lipid carrier : UDP-N-acetylgalactosaminyltransferase (EC 2.4.1.-) CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria
fig|6666666.230104.peg.130 CDS JNHN01000004.1 68561 68373 -2 - 189 hypothetical protein - none -
fig|6666666.230104.peg.131 CDS JNHN01000004.1 68541 68978 3 + 438 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.230104.peg.132 CDS JNHN01000004.1 69117 68980 -3 - 138 hypothetical protein - none -
fig|6666666.230104.peg.133 CDS JNHN01000004.1 69085 70335 1 + 1251 Lipopolysaccharide biosynthesis protein RffA - none -
fig|6666666.230104.peg.134 CDS JNHN01000004.1 70368 70499 3 + 132 hypothetical protein - none -
fig|6666666.230104.peg.135 CDS JNHN01000004.1 70776 71057 3 + 282 hypothetical protein - none -
fig|6666666.230104.peg.136 CDS JNHN01000004.1 71312 71464 2 + 153 hypothetical protein - none -
fig|6666666.230104.peg.137 CDS JNHN01000005.1 63 860 3 + 798 FIG00408294: hypothetical protein - none -
fig|6666666.230104.peg.138 CDS JNHN01000005.1 923 1066 2 + 144 hypothetical protein - none -
fig|6666666.230104.peg.139 CDS JNHN01000005.1 1192 3009 1 + 1818 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.140 CDS JNHN01000005.1 3115 7068 1 + 3954 DNA-binding response regulator, AraC family - none -
fig|6666666.230104.peg.141 CDS JNHN01000005.1 7369 10419 1 + 3051 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.142 CDS JNHN01000005.1 10514 12019 2 + 1506 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.143 CDS JNHN01000005.1 12104 14746 2 + 2643 Endo-1,4-beta-xylanase D - none -
fig|6666666.230104.peg.144 CDS JNHN01000005.1 14992 15960 1 + 969 Endo-1,4-beta-xylanase D - none -
fig|6666666.230104.peg.145 CDS JNHN01000005.1 15964 16932 1 + 969 endo-1,4-beta-xylanase - none -
fig|6666666.230104.peg.146 CDS JNHN01000005.1 16960 17967 1 + 1008 Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99) L-Arabinose utilization
fig|6666666.230104.peg.147 CDS JNHN01000005.1 17964 20699 3 + 2736 Alfa-L-rhamnosidase (EC 3.2.1.40) - none -
fig|6666666.230104.peg.148 CDS JNHN01000005.1 20733 22763 3 + 2031 FIG00938305: hypothetical protein - none -
fig|6666666.230104.peg.149 CDS JNHN01000005.1 22793 23929 2 + 1137 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.150 CDS JNHN01000005.1 23993 25429 2 + 1437 putative pyrogenic exotoxin B - none -
fig|6666666.230104.peg.151 CDS JNHN01000005.1 25436 25963 2 + 528 FIG00405963: hypothetical protein - none -
fig|6666666.230104.peg.152 CDS JNHN01000005.1 26095 26631 1 + 537 FIG00405963: hypothetical protein - none -
fig|6666666.230104.peg.153 CDS JNHN01000005.1 27116 26703 -2 - 414 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.230104.peg.154 CDS JNHN01000005.1 28409 27177 -2 - 1233 Spore maturation protein A-like protein Spore Core Dehydration
fig|6666666.230104.peg.155 CDS JNHN01000005.1 29439 28435 -3 - 1005 Aminopeptidase - none -
fig|6666666.230104.peg.156 CDS JNHN01000005.1 29571 30338 3 + 768 probable DNA alkylation repair enzyme - none -
fig|6666666.230104.peg.157 CDS JNHN01000005.1 30951 30517 -3 - 435 hypothetical protein - none -
fig|6666666.230104.peg.158 CDS JNHN01000005.1 31251 32636 3 + 1386 hypothetical protein - none -
fig|6666666.230104.peg.159 CDS JNHN01000005.1 32638 33306 1 + 669 hypothetical protein - none -
fig|6666666.230104.peg.160 CDS JNHN01000005.1 33346 34395 1 + 1050 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.230104.peg.161 CDS JNHN01000005.1 34438 35880 1 + 1443 Polysaccharide biosynthesis protein - none -
fig|6666666.230104.peg.162 CDS JNHN01000005.1 36058 36729 1 + 672 DNA-damage-inducible protein D - none -
fig|6666666.230104.peg.163 CDS JNHN01000005.1 36746 38116 2 + 1371 FIG00761799: membrane protein - none -
fig|6666666.230104.peg.164 CDS JNHN01000005.1 38133 40271 3 + 2139 FIG00936757: hypothetical protein - none -
fig|6666666.230104.peg.165 CDS JNHN01000005.1 41842 40310 -1 - 1533 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.230104.peg.166 CDS JNHN01000005.1 42606 42040 -3 - 567 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.230104.peg.167 CDS JNHN01000005.1 43737 42802 -3 - 936 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.230104.peg.168 CDS JNHN01000005.1 43869 44357 3 + 489 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.230104.peg.169 CDS JNHN01000005.1 46402 44447 -1 - 1956 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.230104.peg.170 CDS JNHN01000005.1 47611 46547 -1 - 1065 Possible protein-tyrosine-phosphatase (EC 3.1.3.48) - none -
fig|6666666.230104.peg.171 CDS JNHN01000005.1 48378 47761 -3 - 618 hypothetical protein - none -
fig|6666666.230104.peg.172 CDS JNHN01000005.1 49029 48415 -3 - 615 hypothetical protein - none -
fig|6666666.230104.peg.173 CDS JNHN01000005.1 50411 49026 -2 - 1386 FIG00415543: hypothetical protein - none -
fig|6666666.230104.peg.174 CDS JNHN01000005.1 51504 50575 -3 - 930 Fructokinase (EC 2.7.1.4) Sucrose utilization
fig|6666666.230104.peg.175 CDS JNHN01000005.1 52097 51492 -2 - 606 Arabinose 5-phosphate isomerase (EC 5.3.1.13) - none -
fig|6666666.230104.peg.176 CDS JNHN01000005.1 52221 53468 3 + 1248 FIG007959: peptidase, M16 family CBSS-1806.1.peg.3045;
CBSS-350688.3.peg.1509
fig|6666666.230104.peg.177 CDS JNHN01000005.1 54410 53478 -2 - 933 Alkaline phosphodiesterase I (EC 3.1.4.1) / Nucleotide pyrophosphatase (EC 3.6.1.9) Purine conversions
fig|6666666.230104.peg.178 CDS JNHN01000005.1 55060 54473 -1 - 588 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.230104.peg.179 CDS JNHN01000005.1 56187 55060 -3 - 1128 N-acetylglucosamine related transporter, NagX - none -
fig|6666666.230104.peg.180 CDS JNHN01000005.1 56351 57943 2 + 1593 Regulatory protein SusR Cellulosome
fig|6666666.230104.peg.181 CDS JNHN01000005.1 58149 59399 3 + 1251 Endoglucanase C (EC 3.2.1.4) - none -
fig|6666666.230104.peg.182 CDS JNHN01000005.1 59760 61985 3 + 2226 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.183 CDS JNHN01000005.1 62256 62909 3 + 654 Aquaporin Z Osmoregulation
fig|6666666.230104.peg.184 CDS JNHN01000005.1 64216 63044 -1 - 1173 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230104.peg.185 CDS JNHN01000005.1 65063 64251 -2 - 813 D-mannonate oxidoreductase (EC 1.1.1.57) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230104.peg.186 CDS JNHN01000005.1 67601 65157 -2 - 2445 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.187 CDS JNHN01000005.1 70173 67810 -3 - 2364 Glucuronyl hydrolase - none -
fig|6666666.230104.peg.188 CDS JNHN01000005.1 72852 70192 -3 - 2661 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.189 CDS JNHN01000005.1 76003 73046 -1 - 2958 Gluconolactonase (EC 3.1.1.17) - none -
fig|6666666.230104.peg.190 CDS JNHN01000005.1 77089 76040 -1 - 1050 hypothetical protein - none -
fig|6666666.230104.peg.191 CDS JNHN01000005.1 77519 77127 -2 - 393 hypothetical protein - none -
fig|6666666.230104.peg.192 CDS JNHN01000005.1 78656 77559 -2 - 1098 SusD, outer membrane protein Cellulosome
fig|6666666.230104.peg.193 CDS JNHN01000006.1 110 307 2 + 198 repA - none -
fig|6666666.230104.peg.194 CDS JNHN01000007.1 124 708 1 + 585 glycosyltransferase - none -
fig|6666666.230104.peg.195 CDS JNHN01000007.1 783 1598 3 + 816 GumL protein - none -
fig|6666666.230104.peg.196 CDS JNHN01000007.1 1611 2774 3 + 1164 hypothetical protein - none -
fig|6666666.230104.peg.197 CDS JNHN01000007.1 2785 4311 1 + 1527 putative flippase - none -
fig|6666666.230104.peg.198 CDS JNHN01000007.1 4358 5332 2 + 975 Beta-1,3-glucosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.230104.peg.199 CDS JNHN01000007.1 5425 6591 1 + 1167 capsular polysaccharide biosynthesis protein Rhamnose containing glycans
fig|6666666.230104.peg.200 CDS JNHN01000007.1 6989 7582 2 + 594 hypothetical protein - none -
fig|6666666.230104.peg.201 CDS JNHN01000007.1 7597 8625 1 + 1029 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230104.peg.202 CDS JNHN01000009.1 1763 255 -2 - 1509 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.230104.peg.203 CDS JNHN01000010.1 1716 127 -3 - 1590 NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
NADH ubiquinone oxidoreductase;
Respiratory Complex I;
Respiratory Complex I
fig|6666666.230104.peg.204 CDS JNHN01000010.1 2313 1732 -3 - 582 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230104.peg.205 CDS JNHN01000010.1 2501 2304 -2 - 198 NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230104.peg.206 CDS JNHN01000010.1 3137 2766 -2 - 372 hypothetical protein - none -
fig|6666666.230104.peg.207 CDS JNHN01000010.1 3426 3241 -3 - 186 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.230104.peg.208 CDS JNHN01000011.1 810 412 -3 - 399 Tryptophan synthase beta chain like (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.230104.peg.209 CDS JNHN01000011.1 1971 817 -3 - 1155 Capsular polysaccharide synthesis enzyme Cap5F - none -
fig|6666666.230104.peg.210 CDS JNHN01000013.1 23 946 2 + 924 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.211 CDS JNHN01000013.1 1996 1082 -1 - 915 NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230104.peg.212 CDS JNHN01000014.1 82 2982 1 + 2901 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.213 CDS JNHN01000014.1 3155 4603 2 + 1449 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.214 CDS JNHN01000014.1 4634 5587 2 + 954 hypothetical protein - none -
fig|6666666.230104.peg.215 CDS JNHN01000014.1 6909 5683 -3 - 1227 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.230104.peg.216 CDS JNHN01000015.1 657 247 -3 - 411 hypothetical protein - none -
fig|6666666.230104.peg.217 CDS JNHN01000016.1 2090 3316 2 + 1227 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.230104.peg.218 CDS JNHN01000017.1 594 1295 3 + 702 hypothetical protein - none -
fig|6666666.230104.peg.219 CDS JNHN01000017.1 1911 1612 -3 - 300 NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230104.peg.220 CDS JNHN01000018.1 494 69 -2 - 426 FIG00410367: hypothetical protein - none -
fig|6666666.230104.peg.221 CDS JNHN01000018.1 628 753 1 + 126 hypothetical protein - none -
fig|6666666.230104.peg.222 CDS JNHN01000018.1 2041 830 -1 - 1212 Small-conductance mechanosensitive channel - none -
fig|6666666.230104.peg.223 CDS JNHN01000019.1 34 936 1 + 903 hypothetical protein - none -
fig|6666666.230104.peg.224 CDS JNHN01000019.1 905 1858 2 + 954 hypothetical protein - none -
fig|6666666.230104.peg.225 CDS JNHN01000019.1 2651 2523 -2 - 129 hypothetical protein - none -
fig|6666666.230104.peg.226 CDS JNHN01000019.1 2934 2662 -3 - 273 hypothetical protein - none -
fig|6666666.230104.peg.227 CDS JNHN01000020.1 99 371 3 + 273 Addiction module toxin, Txe/YoeB - none -
fig|6666666.230104.peg.228 CDS JNHN01000021.1 24 959 3 + 936 Phage terminase, large subunit Phage packaging machinery
fig|6666666.230104.peg.229 CDS JNHN01000021.1 961 1191 1 + 231 hypothetical protein - none -
fig|6666666.230104.peg.230 CDS JNHN01000021.1 1202 1621 2 + 420 FIG00937200: hypothetical protein - none -
fig|6666666.230104.peg.231 CDS JNHN01000021.1 1626 2936 3 + 1311 Mu-like prophage FluMu protein gp29 - none -
fig|6666666.230104.peg.232 CDS JNHN01000021.1 3008 4219 2 + 1212 Phage (Mu-like) virion morphogenesis protein - none -
fig|6666666.230104.peg.233 CDS JNHN01000021.1 4317 4550 3 + 234 FIG00402815: hypothetical protein - none -
fig|6666666.230104.peg.234 CDS JNHN01000021.1 4617 4730 3 + 114 hypothetical protein - none -
fig|6666666.230104.peg.235 CDS JNHN01000021.1 4926 6227 3 + 1302 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) Group II intron-associated genes
fig|6666666.230104.peg.236 CDS JNHN01000021.1 6224 6709 2 + 486 FIG00407789: hypothetical protein - none -
fig|6666666.230104.peg.237 CDS JNHN01000021.1 6970 7155 1 + 186 hypothetical protein - none -
fig|6666666.230104.peg.238 CDS JNHN01000021.1 7227 7865 3 + 639 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis
fig|6666666.230104.peg.239 CDS JNHN01000021.1 7862 8701 2 + 840 FIG00412531: hypothetical protein - none -
fig|6666666.230104.peg.240 CDS JNHN01000021.1 9199 8786 -1 - 414 hypothetical protein - none -
fig|6666666.230104.peg.241 CDS JNHN01000021.1 9777 9217 -3 - 561 hypothetical protein - none -
fig|6666666.230104.peg.242 CDS JNHN01000021.1 9887 9774 -2 - 114 hypothetical protein - none -
fig|6666666.230104.peg.243 CDS JNHN01000021.1 10930 10262 -1 - 669 FIG00406507: hypothetical protein - none -
fig|6666666.230104.peg.244 CDS JNHN01000021.1 11131 10949 -1 - 183 hypothetical protein - none -
fig|6666666.230104.peg.245 CDS JNHN01000021.1 11632 11138 -1 - 495 hypothetical protein - none -
fig|6666666.230104.peg.246 CDS JNHN01000021.1 11906 11634 -2 - 273 hypothetical protein - none -
fig|6666666.230104.peg.247 CDS JNHN01000022.1 2041 1187 -1 - 855 Mobile element protein - none -
fig|6666666.230104.peg.248 CDS JNHN01000023.1 1622 636 -2 - 987 putative AraC family transcriptional regulatory protein - none -
fig|6666666.230104.peg.249 CDS JNHN01000024.1 7 1485 1 + 1479 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230104.peg.250 CDS JNHN01000025.1 37 1053 1 + 1017 type II DNA modification methyltransferase, putative - none -
fig|6666666.230104.peg.251 CDS JNHN01000025.1 1060 5043 1 + 3984 Type II restriction endonuclease - none -
fig|6666666.230104.peg.252 CDS JNHN01000025.1 6859 5156 -1 - 1704 abortive infection phage resistance protein - none -
fig|6666666.230104.peg.253 CDS JNHN01000025.1 7542 6928 -3 - 615 hypothetical protein - none -
fig|6666666.230104.peg.254 CDS JNHN01000025.1 8833 7535 -1 - 1299 putative ATP-binding protein - none -
fig|6666666.230104.peg.255 CDS JNHN01000025.1 9915 9187 -3 - 729 Regulatory protein SusR Cellulosome
fig|6666666.230104.peg.256 CDS JNHN01000025.1 10120 12615 1 + 2496 glycosyl hydrolase, family 9 - none -
fig|6666666.230104.peg.257 CDS JNHN01000025.1 12658 13461 1 + 804 40-residue YVTN beta-propeller repeat protein - none -
fig|6666666.230104.peg.258 CDS JNHN01000025.1 13591 13454 -1 - 138 hypothetical protein - none -
fig|6666666.230104.peg.259 CDS JNHN01000025.1 15625 14063 -1 - 1563 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.260 CDS JNHN01000025.1 17584 15647 -1 - 1938 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.261 CDS JNHN01000026.1 2334 1333 -3 - 1002 hypothetical protein - none -
fig|6666666.230104.peg.262 CDS JNHN01000026.1 3322 2324 -1 - 999 hypothetical protein - none -
fig|6666666.230104.peg.263 CDS JNHN01000026.1 3997 3569 -1 - 429 hypothetical protein - none -
fig|6666666.230104.peg.264 CDS JNHN01000026.1 5102 4062 -2 - 1041 hypothetical protein - none -
fig|6666666.230104.peg.265 CDS JNHN01000026.1 5441 5202 -2 - 240 hypothetical protein - none -
fig|6666666.230104.peg.266 CDS JNHN01000026.1 6679 5651 -1 - 1029 FIG00898411: hypothetical protein - none -
fig|6666666.230104.peg.267 CDS JNHN01000026.1 6836 6690 -2 - 147 hypothetical protein - none -
fig|6666666.230104.peg.268 CDS JNHN01000026.1 8067 7075 -3 - 993 hypothetical protein - none -
fig|6666666.230104.peg.269 CDS JNHN01000026.1 9918 8353 -3 - 1566 FIG00417169: hypothetical protein - none -
fig|6666666.230104.peg.270 CDS JNHN01000026.1 11196 10384 -3 - 813 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Sialic Acid Metabolism
fig|6666666.230104.peg.271 CDS JNHN01000026.1 12435 11275 -3 - 1161 Alkyldihydroxyacetonephosphate synthase (EC 2.5.1.26) - none -
fig|6666666.230104.peg.272 CDS JNHN01000026.1 13465 12536 -1 - 930 COG1242: Predicted Fe-S oxidoreductase - none -
fig|6666666.230104.peg.273 CDS JNHN01000026.1 13781 14740 2 + 960 Glucokinase (EC 2.7.1.2) Glycolysis and Gluconeogenesis
fig|6666666.230104.peg.274 CDS JNHN01000026.1 14733 15884 3 + 1152 FIG00406514: hypothetical protein - none -
fig|6666666.230104.peg.275 CDS JNHN01000026.1 15955 16677 1 + 723 UPF0309 protein SCO4393 - none -
fig|6666666.230104.peg.276 CDS JNHN01000026.1 16895 16716 -2 - 180 hypothetical protein - none -
fig|6666666.230104.peg.277 CDS JNHN01000026.1 16879 19092 1 + 2214 Dipeptidyl peptidase IV - none -
fig|6666666.230104.peg.278 CDS JNHN01000026.1 19092 19973 3 + 882 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.230104.peg.279 CDS JNHN01000026.1 20020 21138 1 + 1119 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions
fig|6666666.230104.peg.280 CDS JNHN01000026.1 21808 21104 -1 - 705 Tetrapyrrole methylase family protein - none -
fig|6666666.230104.peg.281 CDS JNHN01000026.1 22665 21808 -3 - 858 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.230104.peg.282 CDS JNHN01000026.1 22728 22973 3 + 246 hypothetical protein - none -
fig|6666666.230104.peg.283 CDS JNHN01000026.1 23027 23680 2 + 654 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.230104.peg.284 CDS JNHN01000026.1 24999 23836 -3 - 1164 Protein-tyrosine-phosphatase (EC 3.1.3.48) - none -
fig|6666666.230104.peg.285 CDS JNHN01000026.1 26484 25018 -3 - 1467 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.286 CDS JNHN01000026.1 29813 26505 -2 - 3309 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.230104.peg.287 CDS JNHN01000026.1 30302 29880 -2 - 423 putative anti-sigma factor - none -
fig|6666666.230104.peg.288 CDS JNHN01000028.1 1411 239 -1 - 1173 L-alanine-DL-glutamate epimerase Muconate lactonizing enzyme family;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230104.peg.289 CDS JNHN01000028.1 2088 1543 -3 - 546 L-alanyl-gamma-D-glutamyl-L-diamino acid endopeptidase Muconate lactonizing enzyme family
fig|6666666.230104.peg.290 CDS JNHN01000029.1 144 380 3 + 237 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) - none -
fig|6666666.230104.peg.291 CDS JNHN01000030.1 797 1573 2 + 777 FIG00412714: hypothetical protein - none -
fig|6666666.230104.peg.292 CDS JNHN01000030.1 1598 2008 2 + 411 FIG00402962: hypothetical protein - none -
fig|6666666.230104.peg.293 CDS JNHN01000031.1 1922 645 -2 - 1278 FIG00939874: hypothetical protein - none -
fig|6666666.230104.peg.294 CDS JNHN01000032.1 29 1132 2 + 1104 NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
NADH ubiquinone oxidoreductase;
Respiratory Complex I;
Respiratory Complex I
fig|6666666.230104.peg.295 CDS JNHN01000032.1 1308 1174 -3 - 135 hypothetical protein - none -
fig|6666666.230104.peg.296 CDS JNHN01000032.1 1273 2349 1 + 1077 NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230104.peg.297 CDS JNHN01000032.1 2407 2910 1 + 504 NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230104.peg.298 CDS JNHN01000032.1 2941 3453 1 + 513 NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230104.peg.299 CDS JNHN01000032.1 3468 3767 3 + 300 NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230104.peg.300 CDS JNHN01000032.1 3826 5739 1 + 1914 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230104.peg.301 CDS JNHN01000032.1 5791 7275 1 + 1485 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230104.peg.302 CDS JNHN01000033.1 405 238 -3 - 168 hypothetical protein - none -
fig|6666666.230104.peg.303 CDS JNHN01000035.1 89 415 2 + 327 hypothetical protein - none -
fig|6666666.230104.peg.304 CDS JNHN01000035.1 432 1535 3 + 1104 hypothetical protein - none -
fig|6666666.230104.peg.305 CDS JNHN01000035.1 2045 1755 -2 - 291 putative helicase - none -
fig|6666666.230104.peg.306 CDS JNHN01000038.1 60 323 3 + 264 LSU ribosomal protein L18p (L5e) - none -
fig|6666666.230104.peg.307 CDS JNHN01000038.1 329 847 2 + 519 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation
fig|6666666.230104.peg.308 CDS JNHN01000038.1 1066 1512 1 + 447 LSU ribosomal protein L15p (L27Ae) - none -
fig|6666666.230104.peg.309 CDS JNHN01000039.1 569 24 -2 - 546 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.310 CDS JNHN01000039.1 1720 590 -1 - 1131 Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent Heat shock dnaK gene cluster extended
fig|6666666.230104.peg.311 CDS JNHN01000039.1 1933 2046 1 + 114 hypothetical protein - none -
fig|6666666.230104.peg.312 CDS JNHN01000040.1 1738 398 -1 - 1341 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.230104.peg.313 CDS JNHN01000040.1 3709 1805 -1 - 1905 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.230104.peg.314 CDS JNHN01000040.1 3912 3769 -3 - 144 hypothetical protein - none -
fig|6666666.230104.peg.315 CDS JNHN01000040.1 4272 5378 3 + 1107 FIG00410004: hypothetical protein - none -
fig|6666666.230104.peg.316 CDS JNHN01000040.1 5569 6522 1 + 954 FIG00404313: hypothetical protein - none -
fig|6666666.230104.peg.317 CDS JNHN01000040.1 6546 9014 3 + 2469 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) / Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
Pyruvate Alanine Serine Interconversions
fig|6666666.230104.peg.318 CDS JNHN01000040.1 9126 9341 3 + 216 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.230104.peg.319 CDS JNHN01000040.1 9527 10348 2 + 822 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.230104.peg.320 CDS JNHN01000040.1 10345 13779 1 + 3435 DNA helicase - none -
fig|6666666.230104.peg.321 CDS JNHN01000040.1 15690 14101 -3 - 1590 Hexuronate transporter D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230104.peg.322 CDS JNHN01000040.1 16689 15733 -3 - 957 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230104.peg.323 CDS JNHN01000040.1 18108 16717 -3 - 1392 PTS system, galactitol-specific IIC component (EC 2.7.1.69) - none -
fig|6666666.230104.peg.324 CDS JNHN01000040.1 18576 19142 3 + 567 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.230104.peg.325 CDS JNHN01000040.1 19247 20422 2 + 1176 putative anti-sigma factor - none -
fig|6666666.230104.peg.326 CDS JNHN01000041.1 377 1480 2 + 1104 hypothetical protein - none -
fig|6666666.230104.peg.327 CDS JNHN01000042.1 808 2289 1 + 1482 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) Pentose phosphate pathway
fig|6666666.230104.peg.328 CDS JNHN01000042.1 2304 3803 3 + 1500 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.230104.peg.329 CDS JNHN01000042.1 3800 4516 2 + 717 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.230104.peg.330 CDS JNHN01000042.1 5507 4509 -2 - 999 FIG00896814: hypothetical protein - none -
fig|6666666.230104.peg.331 CDS JNHN01000042.1 6296 5652 -2 - 645 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230104.peg.332 CDS JNHN01000042.1 7299 6613 -3 - 687 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.230104.peg.333 CDS JNHN01000042.1 8414 7713 -2 - 702 Two-component system response regulator - none -
fig|6666666.230104.peg.334 CDS JNHN01000042.1 9478 8411 -1 - 1068 putative two-component system sensor protein, no kinase domain - none -
fig|6666666.230104.peg.335 CDS JNHN01000042.1 9508 9636 1 + 129 hypothetical protein - none -
fig|6666666.230104.peg.336 CDS JNHN01000042.1 10944 9724 -3 - 1221 ABC transporter, permease protein - none -
fig|6666666.230104.peg.337 CDS JNHN01000042.1 11744 10998 -2 - 747 ABC transporter ATP-binding protein - none -
fig|6666666.230104.peg.338 CDS JNHN01000042.1 12989 11760 -2 - 1230 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.339 CDS JNHN01000042.1 14402 13002 -2 - 1401 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.340 CDS JNHN01000042.1 14514 14834 3 + 321 FIG00896375: hypothetical protein - none -
fig|6666666.230104.peg.341 CDS JNHN01000042.1 14951 16513 2 + 1563 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.230104.peg.342 CDS JNHN01000042.1 16546 17694 1 + 1149 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.230104.peg.343 CDS JNHN01000042.1 18474 17770 -3 - 705 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.230104.peg.344 CDS JNHN01000042.1 19245 18571 -3 - 675 OmpA family outer membrane protein - none -
fig|6666666.230104.peg.345 CDS JNHN01000042.1 20674 19346 -1 - 1329 Na+ driven multidrug efflux pump - none -
fig|6666666.230104.peg.346 CDS JNHN01000042.1 22047 20707 -3 - 1341 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.230104.peg.347 CDS JNHN01000042.1 22850 22089 -2 - 762 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.230104.peg.348 CDS JNHN01000042.1 23677 22877 -1 - 801 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.230104.peg.349 CDS JNHN01000042.1 25073 23667 -2 - 1407 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.230104.peg.350 CDS JNHN01000042.1 25284 26048 3 + 765 Short chain dehydrogenase - none -
fig|6666666.230104.peg.351 CDS JNHN01000042.1 26149 28353 1 + 2205 Alpha-galactosidase (EC 3.2.1.22) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization
fig|6666666.230104.peg.352 CDS JNHN01000042.1 28908 30605 3 + 1698 ABC transporter ATP-binding protein - none -
fig|6666666.230104.peg.353 CDS JNHN01000042.1 30857 33577 2 + 2721 Thiamin-regulated outer membrane receptor Omr1 Thiamin biosynthesis
fig|6666666.230104.peg.354 CDS JNHN01000042.1 33590 36082 2 + 2493 hypothetical protein - none -
fig|6666666.230104.peg.355 CDS JNHN01000042.1 36180 37469 3 + 1290 putative endonuclease precursor - none -
fig|6666666.230104.peg.356 CDS JNHN01000042.1 37616 38953 2 + 1338 ATP-dependent RNA helicase - none -
fig|6666666.230104.peg.357 CDS JNHN01000042.1 39204 40295 3 + 1092 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.230104.peg.358 CDS JNHN01000043.1 1691 1176 -2 - 516 Maltodextrin glucosidase (EC 3.2.1.20) Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.359 CDS JNHN01000044.1 30 794 3 + 765 Mobile element protein - none -
fig|6666666.230104.peg.360 CDS JNHN01000044.1 1416 1213 -3 - 204 Transcriptional regulator - none -
fig|6666666.230104.peg.361 CDS JNHN01000044.1 2101 1460 -1 - 642 FIG00403233: hypothetical protein - none -
fig|6666666.230104.peg.362 CDS JNHN01000044.1 2722 2117 -1 - 606 FIG00403233: hypothetical protein - none -
fig|6666666.230104.peg.363 CDS JNHN01000044.1 3414 2746 -3 - 669 FIG00403233: hypothetical protein - none -
fig|6666666.230104.peg.364 CDS JNHN01000044.1 4178 3411 -2 - 768 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.230104.peg.365 CDS JNHN01000044.1 4868 4383 -2 - 486 FIG00418137: hypothetical protein - none -
fig|6666666.230104.peg.366 CDS JNHN01000044.1 6032 5091 -2 - 942 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) CBSS-350688.3.peg.1509;
CBSS-350688.3.peg.1509;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.230104.peg.367 CDS JNHN01000044.1 6636 6016 -3 - 621 Haloacid dehalogenase-like hydrolase - none -
fig|6666666.230104.peg.368 CDS JNHN01000044.1 9323 6639 -2 - 2685 Calcium-transporting ATPase - none -
fig|6666666.230104.peg.369 CDS JNHN01000044.1 10580 9414 -2 - 1167 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.370 CDS JNHN01000044.1 10689 10850 3 + 162 Rubredoxin Rubrerythrin
fig|6666666.230104.peg.371 CDS JNHN01000044.1 12544 10847 -1 - 1698 Sodium-dependent phosphate transporter NhaA, NhaD and Sodium-dependent phosphate transporters;
Phosphate metabolism
fig|6666666.230104.peg.372 CDS JNHN01000044.1 12637 14301 1 + 1665 Uridine kinase (EC 2.7.1.48) - none -
fig|6666666.230104.peg.373 CDS JNHN01000044.1 14344 15849 1 + 1506 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.374 CDS JNHN01000044.1 17324 15951 -2 - 1374 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-)
fig|6666666.230104.peg.375 CDS JNHN01000044.1 17652 19142 3 + 1491 RNA polymerase sigma-54 factor RpoN Transcription initiation, bacterial sigma factors
fig|6666666.230104.peg.376 CDS JNHN01000044.1 19236 19898 3 + 663 FIG00937061: hypothetical protein - none -
fig|6666666.230104.peg.377 CDS JNHN01000044.1 19961 20347 2 + 387 Glycine cleavage system H protein Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.230104.peg.378 CDS JNHN01000044.1 20464 20973 1 + 510 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.230104.peg.379 CDS JNHN01000044.1 21088 22956 1 + 1869 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.230104.peg.380 CDS JNHN01000044.1 23958 22960 -3 - 999 putative secreted protein - none -
fig|6666666.230104.peg.381 CDS JNHN01000044.1 24728 23958 -2 - 771 FIG00653406: hypothetical protein - none -
fig|6666666.230104.peg.382 CDS JNHN01000044.1 26464 24737 -1 - 1728 Arabinan endo-1,5-alpha-L-arabinosidase A - none -
fig|6666666.230104.peg.383 CDS JNHN01000044.1 28094 26520 -2 - 1575 Mucin-desulfating sulfatase - none -
fig|6666666.230104.peg.384 CDS JNHN01000044.1 29168 28317 -2 - 852 endonuclease/exonuclease/phosphatase family protein - none -
fig|6666666.230104.peg.385 CDS JNHN01000044.1 30546 29224 -3 - 1323 FIG00908315: hypothetical protein - none -
fig|6666666.230104.peg.386 CDS JNHN01000044.1 32191 30551 -1 - 1641 FIG00908315: hypothetical protein - none -
fig|6666666.230104.peg.387 CDS JNHN01000044.1 33053 32217 -2 - 837 FIG00473187: hypothetical protein - none -
fig|6666666.230104.peg.388 CDS JNHN01000044.1 34596 33076 -3 - 1521 FIG00411172: hypothetical protein - none -
fig|6666666.230104.peg.389 CDS JNHN01000044.1 37588 34616 -1 - 2973 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.390 CDS JNHN01000044.1 38369 38058 -2 - 312 Periplasmic beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.391 CDS JNHN01000048.1 1237 23 -1 - 1215 Mobile element protein - none -
fig|6666666.230104.peg.392 CDS JNHN01000048.1 1548 1267 -3 - 282 hypothetical protein - none -
fig|6666666.230104.peg.393 CDS JNHN01000048.1 1558 1695 1 + 138 hypothetical protein - none -
fig|6666666.230104.peg.394 CDS JNHN01000048.1 2018 1707 -2 - 312 Mobilization protein BmgA - none -
fig|6666666.230104.peg.395 CDS JNHN01000049.1 74 817 2 + 744 hypothetical protein - none -
fig|6666666.230104.peg.396 CDS JNHN01000049.1 2046 1057 -3 - 990 Mobile element protein - none -
fig|6666666.230104.peg.397 CDS JNHN01000050.1 87 734 3 + 648 ABC transporter ATP-binding protein uup - none -
fig|6666666.230104.peg.398 CDS JNHN01000050.1 2022 1015 -3 - 1008 FIG00404447: hypothetical protein - none -
fig|6666666.230104.peg.399 CDS JNHN01000052.1 28 1059 1 + 1032 Mobile element protein - none -
fig|6666666.230104.peg.400 CDS JNHN01000052.1 1120 3171 1 + 2052 Chondroitinase AC precursor (EC 4.2.2.5) - none -
fig|6666666.230104.peg.401 CDS JNHN01000052.1 3225 4193 3 + 969 Probable transcriptional regulator - none -
fig|6666666.230104.peg.402 CDS JNHN01000052.1 7512 4426 -3 - 3087 Chondroitinase (chondroitin lyase) - none -
fig|6666666.230104.peg.403 CDS JNHN01000052.1 8157 7519 -3 - 639 FIG00411032: hypothetical protein - none -
fig|6666666.230104.peg.404 CDS JNHN01000052.1 8835 8323 -3 - 513 FIG00407889: hypothetical protein - none -
fig|6666666.230104.peg.405 CDS JNHN01000052.1 10187 8913 -2 - 1275 FIG00937754: hypothetical protein - none -
fig|6666666.230104.peg.406 CDS JNHN01000052.1 10284 11048 3 + 765 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230104.peg.407 CDS JNHN01000052.1 11055 12548 3 + 1494 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.230104.peg.408 CDS JNHN01000052.1 12679 13596 1 + 918 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.230104.peg.409 CDS JNHN01000052.1 13686 14306 3 + 621 FIG00649844: hypothetical protein - none -
fig|6666666.230104.peg.410 CDS JNHN01000052.1 17607 14722 -3 - 2886 hypothetical protein - none -
fig|6666666.230104.peg.411 CDS JNHN01000052.1 17893 18366 1 + 474 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.412 CDS JNHN01000052.1 18403 19704 1 + 1302 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.413 CDS JNHN01000052.1 19900 22926 1 + 3027 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.414 CDS JNHN01000052.1 22950 24704 3 + 1755 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.415 CDS JNHN01000052.1 24744 25136 3 + 393 hypothetical protein - none -
fig|6666666.230104.peg.416 CDS JNHN01000052.1 25174 26223 1 + 1050 hypothetical protein - none -
fig|6666666.230104.peg.417 CDS JNHN01000053.1 803 1522 2 + 720 hypothetical protein - none -
fig|6666666.230104.peg.418 CDS JNHN01000053.1 2669 3109 2 + 441 hypothetical protein - none -
fig|6666666.230104.peg.419 CDS JNHN01000053.1 3682 5775 1 + 2094 putative helicase - none -
fig|6666666.230104.peg.420 CDS JNHN01000053.1 6992 5772 -2 - 1221 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.230104.peg.421 CDS JNHN01000053.1 7130 7708 2 + 579 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.230104.peg.422 CDS JNHN01000053.1 10929 7834 -3 - 3096 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.423 CDS JNHN01000053.1 13056 11107 -3 - 1950 Alpha-N-arabinofuranosidase (EC 3.2.1.55) L-Arabinose utilization
fig|6666666.230104.peg.424 CDS JNHN01000053.1 15102 13111 -3 - 1992 Putative glycosyl hydrolase of unknown function (DUF1680) - none -
fig|6666666.230104.peg.425 CDS JNHN01000053.1 17673 15160 -3 - 2514 Alpha-N-arabinofuranosidase (EC 3.2.1.55) L-Arabinose utilization
fig|6666666.230104.peg.426 CDS JNHN01000053.1 19872 17926 -3 - 1947 Beta-xylosidase (EC 3.2.1.37) Xylose utilization
fig|6666666.230104.peg.427 CDS JNHN01000053.1 21843 19903 -3 - 1941 Hypothetical glycoside hydrolase, family 43, similar to arabinosidase L-Arabinose utilization
fig|6666666.230104.peg.428 CDS JNHN01000053.1 23081 21954 -2 - 1128 Rhamnogalacturonides degradation protein RhiN D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230104.peg.429 CDS JNHN01000053.1 24430 23099 -1 - 1332 FIG00410552: hypothetical protein - none -
fig|6666666.230104.peg.430 CDS JNHN01000053.1 25676 24423 -2 - 1254 FIG00939120: hypothetical protein - none -
fig|6666666.230104.peg.431 CDS JNHN01000053.1 25969 25856 -1 - 114 hypothetical protein - none -
fig|6666666.230104.peg.432 CDS JNHN01000054.1 382 1986 1 + 1605 hypothetical protein - none -
fig|6666666.230104.peg.433 CDS JNHN01000055.1 85 300 1 + 216 hypothetical protein - none -
fig|6666666.230104.peg.434 CDS JNHN01000056.1 6 875 3 + 870 hypothetical protein - none -
fig|6666666.230104.peg.435 CDS JNHN01000056.1 1090 1206 1 + 117 hypothetical protein - none -
fig|6666666.230104.peg.436 CDS JNHN01000056.1 1466 2413 2 + 948 Ribulokinase (EC 2.7.1.16) L-Arabinose utilization
fig|6666666.230104.peg.437 CDS JNHN01000056.1 2442 3623 3 + 1182 FIG00411978: hypothetical protein - none -
fig|6666666.230104.peg.438 CDS JNHN01000056.1 3724 4929 1 + 1206 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.439 CDS JNHN01000056.1 4960 6942 1 + 1983 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.440 CDS JNHN01000056.1 7004 8764 2 + 1761 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.441 CDS JNHN01000056.1 9297 10703 3 + 1407 FIG00413844: hypothetical protein - none -
fig|6666666.230104.peg.442 CDS JNHN01000056.1 10726 12822 1 + 2097 FIG00415226: hypothetical protein - none -
fig|6666666.230104.peg.443 CDS JNHN01000056.1 12916 15828 1 + 2913 FIG00405611: hypothetical protein - none -
fig|6666666.230104.peg.444 CDS JNHN01000056.1 17596 16727 -1 - 870 hypothetical protein - none -
fig|6666666.230104.peg.445 CDS JNHN01000057.1 124 708 1 + 585 glycosyltransferase - none -
fig|6666666.230104.peg.446 CDS JNHN01000057.1 715 1599 1 + 885 GumL protein - none -
fig|6666666.230104.peg.447 CDS JNHN01000058.1 404 1090 2 + 687 hypothetical protein - none -
fig|6666666.230104.peg.448 CDS JNHN01000058.1 2033 1905 -2 - 129 hypothetical protein - none -
fig|6666666.230104.peg.449 CDS JNHN01000060.1 91 987 1 + 897 L-rhamnose isomerase (EC 5.3.1.14) - none -
fig|6666666.230104.peg.450 CDS JNHN01000060.1 1010 2020 2 + 1011 L-rhamnose-proton symporter - none -
fig|6666666.230104.peg.451 CDS JNHN01000060.1 2068 2877 1 + 810 Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) - none -
fig|6666666.230104.peg.452 CDS JNHN01000060.1 2903 4057 2 + 1155 Lactaldehyde reductase (EC 1.1.1.77) - none -
fig|6666666.230104.peg.453 CDS JNHN01000060.1 4180 5097 1 + 918 Transcriptional regulator of rhamnose utilization, AraC family - none -
fig|6666666.230104.peg.454 CDS JNHN01000060.1 5452 7581 1 + 2130 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230104.peg.455 CDS JNHN01000060.1 8006 8590 2 + 585 hypothetical protein - none -
fig|6666666.230104.peg.456 CDS JNHN01000060.1 8580 9053 3 + 474 hypothetical protein - none -
fig|6666666.230104.peg.457 CDS JNHN01000060.1 9178 10293 1 + 1116 Prophage Clp protease-like protein cAMP signaling in bacteria
fig|6666666.230104.peg.458 CDS JNHN01000060.1 10311 11543 3 + 1233 hypothetical protein - none -
fig|6666666.230104.peg.459 CDS JNHN01000060.1 11558 12160 2 + 603 hypothetical protein - none -
fig|6666666.230104.peg.460 CDS JNHN01000060.1 12294 13184 3 + 891 hypothetical protein - none -
fig|6666666.230104.peg.461 CDS JNHN01000060.1 13188 13805 3 + 618 hypothetical protein - none -
fig|6666666.230104.peg.462 CDS JNHN01000060.1 13780 14064 1 + 285 hypothetical protein - none -
fig|6666666.230104.peg.463 CDS JNHN01000060.1 14057 14659 2 + 603 hypothetical protein - none -
fig|6666666.230104.peg.464 CDS JNHN01000061.1 937 494 -1 - 444 hypothetical protein - none -
fig|6666666.230104.peg.465 CDS JNHN01000062.1 24 983 3 + 960 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230104.peg.466 CDS JNHN01000063.1 1743 223 -3 - 1521 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.467 CDS JNHN01000063.1 1969 1763 -1 - 207 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.468 CDS JNHN01000064.1 1439 6 -2 - 1434 FIG00413844: hypothetical protein - none -
fig|6666666.230104.peg.469 CDS JNHN01000064.1 1562 1446 -2 - 117 Maltodextrin glucosidase (EC 3.2.1.20) Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.470 CDS JNHN01000065.1 1 963 1 + 963 Lysine 2,3-aminomutase (EC 5.4.3.2) - none -
fig|6666666.230104.peg.471 CDS JNHN01000065.1 1018 1593 1 + 576 G:T/U mismatch-specific uracil/thymine DNA-glycosylase DNA repair, bacterial;
Uracil-DNA glycosylase
fig|6666666.230104.peg.472 CDS JNHN01000065.1 2026 1799 -1 - 228 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230104.peg.473 CDS JNHN01000066.1 421 2 -1 - 420 FIG00937200: hypothetical protein - none -
fig|6666666.230104.peg.474 CDS JNHN01000066.1 662 432 -2 - 231 hypothetical protein - none -
fig|6666666.230104.peg.475 CDS JNHN01000066.1 2037 664 -3 - 1374 Phage terminase, large subunit @ intein-containing Inteins;
Phage packaging machinery
fig|6666666.230104.peg.476 CDS JNHN01000067.1 508 744 1 + 237 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.230104.peg.477 CDS JNHN01000067.1 915 1562 3 + 648 FIG00938099: hypothetical protein - none -
fig|6666666.230104.peg.478 CDS JNHN01000067.1 1616 2686 2 + 1071 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.230104.peg.479 CDS JNHN01000067.1 2683 3663 1 + 981 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.230104.peg.480 CDS JNHN01000067.1 3676 4833 1 + 1158 FIG00938859: hypothetical protein - none -
fig|6666666.230104.peg.481 CDS JNHN01000067.1 4838 5506 2 + 669 FIG00402748: hypothetical protein - none -
fig|6666666.230104.peg.482 CDS JNHN01000067.1 5520 5906 3 + 387 FIG00403504: hypothetical protein - none -
fig|6666666.230104.peg.483 CDS JNHN01000067.1 7000 6047 -1 - 954 N-acetylornithine carbamoyltransferase (EC 2.1.3.9) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230104.peg.484 CDS JNHN01000067.1 8235 7045 -3 - 1191 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.230104.peg.485 CDS JNHN01000067.1 9438 8359 -3 - 1080 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.230104.peg.486 CDS JNHN01000067.1 9667 9428 -1 - 240 FIG00405789: hypothetical protein - none -
fig|6666666.230104.peg.487 CDS JNHN01000067.1 10582 9743 -1 - 840 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.230104.peg.488 CDS JNHN01000067.1 11198 10692 -2 - 507 Outer membrane protein H precursor Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.230104.peg.489 CDS JNHN01000067.1 11827 11327 -1 - 501 Outer membrane protein H precursor Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.230104.peg.490 CDS JNHN01000067.1 14523 11884 -3 - 2640 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.230104.peg.491 CDS JNHN01000067.1 15313 14576 -1 - 738 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.230104.peg.492 CDS JNHN01000067.1 16482 15316 -3 - 1167 FIG00936986: hypothetical protein - none -
fig|6666666.230104.peg.493 CDS JNHN01000067.1 17870 16815 -2 - 1056 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.230104.peg.494 CDS JNHN01000067.1 17945 18781 2 + 837 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.230104.peg.495 CDS JNHN01000067.1 18778 19257 1 + 480 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.230104.peg.496 CDS JNHN01000067.1 19340 19978 2 + 639 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.230104.peg.497 CDS JNHN01000067.1 20072 20482 2 + 411 FIG00938009: hypothetical protein - none -
fig|6666666.230104.peg.498 CDS JNHN01000067.1 20511 21851 3 + 1341 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230104.peg.499 CDS JNHN01000067.1 23731 22481 -1 - 1251 FIG00414882: hypothetical protein - none -
fig|6666666.230104.peg.500 CDS JNHN01000067.1 25606 23951 -1 - 1656 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases - none -
fig|6666666.230104.peg.501 CDS JNHN01000067.1 26168 25614 -2 - 555 Transcriptional regulator - none -
fig|6666666.230104.peg.502 CDS JNHN01000067.1 27063 26290 -3 - 774 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.230104.peg.503 CDS JNHN01000067.1 28314 27193 -3 - 1122 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230104.peg.504 CDS JNHN01000067.1 29288 28320 -2 - 969 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230104.peg.505 CDS JNHN01000067.1 29499 29281 -3 - 219 Stress-responsive transcriptional regulator - none -
fig|6666666.230104.peg.506 CDS JNHN01000067.1 30705 29500 -3 - 1206 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230104.peg.507 CDS JNHN01000067.1 31275 30718 -3 - 558 FIG00651573: hypothetical protein - none -
fig|6666666.230104.peg.508 CDS JNHN01000067.1 31784 31311 -2 - 474 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine and Ornithine Degradation
fig|6666666.230104.peg.509 CDS JNHN01000067.1 32102 33574 2 + 1473 Rhamnulokinase (EC 2.7.1.5) - none -
fig|6666666.230104.peg.510 CDS JNHN01000067.1 33616 34869 1 + 1254 L-rhamnose isomerase (EC 5.3.1.14) - none -
fig|6666666.230104.peg.511 CDS JNHN01000067.1 34892 35902 2 + 1011 L-rhamnose-proton symporter - none -
fig|6666666.230104.peg.512 CDS JNHN01000067.1 35950 36759 1 + 810 Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) - none -
fig|6666666.230104.peg.513 CDS JNHN01000067.1 36785 37939 2 + 1155 Lactaldehyde reductase (EC 1.1.1.77) - none -
fig|6666666.230104.peg.514 CDS JNHN01000067.1 38062 38979 1 + 918 Transcriptional regulator of rhamnose utilization, AraC family - none -
fig|6666666.230104.peg.515 CDS JNHN01000067.1 39334 41463 1 + 2130 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230104.peg.516 CDS JNHN01000068.1 558 253 -3 - 306 Putative N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase Teichuronic acid biosynthesis
fig|6666666.230104.peg.517 CDS JNHN01000068.1 1097 555 -2 - 543 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230104.peg.518 CDS JNHN01000069.1 1756 977 -1 - 780 FIG00937393: hypothetical protein - none -
fig|6666666.230104.peg.519 CDS JNHN01000069.1 2641 1757 -1 - 885 Chromosome (plasmid) partitioning protein ParB Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.230104.peg.520 CDS JNHN01000069.1 3519 2749 -3 - 771 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.230104.peg.521 CDS JNHN01000069.1 4414 3941 -1 - 474 probable membrane protein NMA1128 - none -
fig|6666666.230104.peg.522 CDS JNHN01000069.1 5896 4460 -1 - 1437 FIG00897336: hypothetical protein - none -
fig|6666666.230104.peg.523 CDS JNHN01000069.1 5903 6022 2 + 120 hypothetical protein - none -
fig|6666666.230104.peg.524 CDS JNHN01000069.1 6054 6818 3 + 765 5-nucleotidase SurE (EC 3.1.3.5) Housecleaning nucleoside triphosphate pyrophosphatases;
Stationary phase repair cluster
fig|6666666.230104.peg.525 CDS JNHN01000069.1 6843 7988 3 + 1146 Lipid-A-disaccharide synthase (EC 2.4.1.182) Llipid A biosynthesis cluster
fig|6666666.230104.peg.526 CDS JNHN01000069.1 8035 8154 1 + 120 hypothetical protein - none -
fig|6666666.230104.peg.527 CDS JNHN01000069.1 8132 8836 2 + 705 FIG00411266: hypothetical protein - none -
fig|6666666.230104.peg.528 CDS JNHN01000069.1 9796 8954 -1 - 843 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230104.peg.529 CDS JNHN01000069.1 10760 9786 -2 - 975 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.230104.peg.530 CDS JNHN01000072.1 2039 3778 2 + 1740 FIG00416911: hypothetical protein - none -
fig|6666666.230104.peg.531 CDS JNHN01000072.1 3786 3941 3 + 156 FIG00416911: hypothetical protein - none -
fig|6666666.230104.peg.532 CDS JNHN01000072.1 3979 8016 1 + 4038 two-component sensor histidine kinase - none -
fig|6666666.230104.peg.533 CDS JNHN01000072.1 8033 9154 2 + 1122 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.534 CDS JNHN01000072.1 9804 9178 -3 - 627 hypothetical protein - none -
fig|6666666.230104.peg.535 CDS JNHN01000072.1 9883 13089 1 + 3207 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.536 CDS JNHN01000072.1 13115 14881 2 + 1767 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.537 CDS JNHN01000072.1 14993 16294 2 + 1302 Glucuronyl hydrolase - none -
fig|6666666.230104.peg.538 CDS JNHN01000072.1 16311 18308 3 + 1998 heparinase III protein - none -
fig|6666666.230104.peg.539 CDS JNHN01000072.1 18660 18511 -3 - 150 hypothetical protein - none -
fig|6666666.230104.peg.540 CDS JNHN01000072.1 18641 20245 2 + 1605 Mucin-desulfating sulfatase - none -
fig|6666666.230104.peg.541 CDS JNHN01000072.1 20260 21888 1 + 1629 FIG00403360: hypothetical protein - none -
fig|6666666.230104.peg.542 CDS JNHN01000072.1 21915 22847 3 + 933 Glucokinase (EC 2.7.1.2) Glycolysis and Gluconeogenesis
fig|6666666.230104.peg.543 CDS JNHN01000072.1 22882 24153 1 + 1272 Hypothetical sugar permease - none -
fig|6666666.230104.peg.544 CDS JNHN01000072.1 24150 26756 3 + 2607 oligo alginate lyase - none -
fig|6666666.230104.peg.545 CDS JNHN01000072.1 26793 28178 3 + 1386 Putative sulfatase (EC 3.1.6.-) - none -
fig|6666666.230104.peg.546 CDS JNHN01000072.1 31751 28755 -2 - 2997 Protein-export membrane protein SecD (TC 3.A.5.1.1) / Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832;
CBSS-211586.1.peg.2832
fig|6666666.230104.peg.547 CDS JNHN01000072.1 33919 31835 -1 - 2085 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.230104.peg.548 CDS JNHN01000072.1 35055 33955 -3 - 1101 AP endonuclease domain protein - none -
fig|6666666.230104.peg.549 CDS JNHN01000072.1 36038 35148 -2 - 891 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.230104.peg.550 CDS JNHN01000072.1 36717 36019 -3 - 699 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.230104.peg.551 CDS JNHN01000072.1 36741 36908 3 + 168 FIG00416267: hypothetical protein - none -
fig|6666666.230104.peg.552 CDS JNHN01000072.1 36949 37215 1 + 267 DNA-binding protein HU-beta DNA structural proteins, bacterial
fig|6666666.230104.peg.553 CDS JNHN01000072.1 37673 37338 -2 - 336 hypothetical protein - none -
fig|6666666.230104.peg.554 CDS JNHN01000075.1 60 434 3 + 375 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria
fig|6666666.230104.peg.555 CDS JNHN01000075.1 480 1628 3 + 1149 Capsular polysaccharide synthesis enzyme Cap5F - none -
fig|6666666.230104.peg.556 CDS JNHN01000076.1 70 357 1 + 288 Mobile element protein - none -
fig|6666666.230104.peg.557 CDS JNHN01000076.1 1618 380 -1 - 1239 FIG00414945: hypothetical protein - none -
fig|6666666.230104.peg.558 CDS JNHN01000076.1 3090 1639 -3 - 1452 putative Fe-S oxidoreductase - none -
fig|6666666.230104.peg.559 CDS JNHN01000076.1 4422 3094 -3 - 1329 FIG00411283: hypothetical protein - none -
fig|6666666.230104.peg.560 CDS JNHN01000076.1 5676 4867 -3 - 810 FIG00415953: hypothetical protein - none -
fig|6666666.230104.peg.561 CDS JNHN01000076.1 6553 5882 -1 - 672 FIG00408819: hypothetical protein - none -
fig|6666666.230104.peg.562 CDS JNHN01000076.1 7282 6980 -1 - 303 hypothetical protein - none -
fig|6666666.230104.peg.563 CDS JNHN01000076.1 9229 7535 -1 - 1695 FIG00414546: hypothetical protein - none -
fig|6666666.230104.peg.564 CDS JNHN01000076.1 9403 9254 -1 - 150 hypothetical protein - none -
fig|6666666.230104.peg.565 CDS JNHN01000076.1 11007 10060 -3 - 948 Mobile element protein - none -
fig|6666666.230104.peg.566 CDS JNHN01000076.1 11225 11043 -2 - 183 hypothetical protein - none -
fig|6666666.230104.peg.567 CDS JNHN01000076.1 12325 11675 -1 - 651 FIG00415953: hypothetical protein - none -
fig|6666666.230104.peg.568 CDS JNHN01000076.1 15580 12374 -1 - 3207 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.569 CDS JNHN01000076.1 17052 15580 -3 - 1473 outer membrane protein TolC, putative - none -
fig|6666666.230104.peg.570 CDS JNHN01000076.1 20108 17049 -2 - 3060 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA Cobalt-zinc-cadmium resistance;
Cobalt-zinc-cadmium resistance
fig|6666666.230104.peg.571 CDS JNHN01000076.1 21236 20157 -2 - 1080 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.230104.peg.572 CDS JNHN01000076.1 23004 21355 -3 - 1650 FIG00896341: hypothetical protein - none -
fig|6666666.230104.peg.573 CDS JNHN01000076.1 23882 22986 -2 - 897 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.230104.peg.574 CDS JNHN01000076.1 25762 23879 -1 - 1884 FIG00403120: hypothetical protein - none -
fig|6666666.230104.peg.575 CDS JNHN01000076.1 26655 25816 -3 - 840 FIG00899164: hypothetical protein - none -
fig|6666666.230104.peg.576 CDS JNHN01000076.1 26947 28182 1 + 1236 Mobile element protein - none -
fig|6666666.230104.peg.577 CDS JNHN01000076.1 28437 28655 3 + 219 hypothetical protein - none -
fig|6666666.230104.peg.578 CDS JNHN01000076.1 28719 28856 3 + 138 FIG00415457: hypothetical protein - none -
fig|6666666.230104.peg.579 CDS JNHN01000076.1 28862 29461 2 + 600 FIG00413964: hypothetical protein - none -
fig|6666666.230104.peg.580 CDS JNHN01000076.1 30078 29845 -3 - 234 hypothetical protein - none -
fig|6666666.230104.peg.581 CDS JNHN01000076.1 30372 30959 3 + 588 FIG00415993: hypothetical protein - none -
fig|6666666.230104.peg.582 CDS JNHN01000076.1 30991 31383 1 + 393 hypothetical protein - none -
fig|6666666.230104.peg.583 CDS JNHN01000076.1 31594 31472 -1 - 123 hypothetical protein - none -
fig|6666666.230104.peg.584 CDS JNHN01000076.1 32231 31908 -2 - 324 FIG00404202: hypothetical protein - none -
fig|6666666.230104.peg.585 CDS JNHN01000076.1 32555 32268 -2 - 288 hypothetical protein - none -
fig|6666666.230104.peg.586 CDS JNHN01000076.1 32873 32562 -2 - 312 FIG00897868: hypothetical protein - none -
fig|6666666.230104.peg.587 CDS JNHN01000076.1 33321 33467 3 + 147 hypothetical protein - none -
fig|6666666.230104.peg.588 CDS JNHN01000076.1 33457 33951 1 + 495 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.589 CDS JNHN01000076.1 34179 34550 3 + 372 Mobile element protein - none -
fig|6666666.230104.peg.590 CDS JNHN01000077.1 4 120 1 + 117 hypothetical protein - none -
fig|6666666.230104.peg.591 CDS JNHN01000077.1 447 157 -3 - 291 FIG00898875: hypothetical protein - none -
fig|6666666.230104.peg.592 CDS JNHN01000077.1 778 1122 1 + 345 FIG00897117: hypothetical protein - none -
fig|6666666.230104.peg.593 CDS JNHN01000077.1 1891 1181 -1 - 711 FIG00899242: hypothetical protein - none -
fig|6666666.230104.peg.594 CDS JNHN01000077.1 2594 1893 -2 - 702 hypothetical protein - none -
fig|6666666.230104.peg.595 CDS JNHN01000077.1 3630 2605 -3 - 1026 FIG00896987: hypothetical protein - none -
fig|6666666.230104.peg.596 CDS JNHN01000077.1 3847 3638 -1 - 210 hypothetical protein - none -
fig|6666666.230104.peg.597 CDS JNHN01000077.1 4122 3823 -3 - 300 hypothetical protein - none -
fig|6666666.230104.peg.598 CDS JNHN01000077.1 4718 4119 -2 - 600 FIG00897967: hypothetical protein - none -
fig|6666666.230104.peg.599 CDS JNHN01000077.1 5263 4853 -1 - 411 FIG00898764: hypothetical protein - none -
fig|6666666.230104.peg.600 CDS JNHN01000077.1 5565 5314 -3 - 252 hypothetical protein - none -
fig|6666666.230104.peg.601 CDS JNHN01000077.1 6522 5635 -3 - 888 hypothetical protein - none -
fig|6666666.230104.peg.602 CDS JNHN01000077.1 7668 6526 -3 - 1143 FIG00898363: hypothetical protein - none -
fig|6666666.230104.peg.603 CDS JNHN01000077.1 7949 7653 -2 - 297 hypothetical protein - none -
fig|6666666.230104.peg.604 CDS JNHN01000077.1 7976 8170 2 + 195 hypothetical protein - none -
fig|6666666.230104.peg.605 CDS JNHN01000077.1 8509 8769 1 + 261 hypothetical protein - none -
fig|6666666.230104.peg.606 CDS JNHN01000077.1 9282 10517 3 + 1236 Mobile element protein - none -
fig|6666666.230104.peg.607 CDS JNHN01000077.1 11796 10591 -3 - 1206 Mobile element protein - none -
fig|6666666.230104.peg.608 CDS JNHN01000077.1 12064 13431 1 + 1368 hypothetical protein - none -
fig|6666666.230104.peg.609 CDS JNHN01000077.1 13993 13871 -1 - 123 hypothetical protein - none -
fig|6666666.230104.peg.610 CDS JNHN01000077.1 14153 15442 2 + 1290 Mobile element protein - none -
fig|6666666.230104.peg.611 CDS JNHN01000077.1 16913 15621 -2 - 1293 Mobile element protein - none -
fig|6666666.230104.peg.612 CDS JNHN01000077.1 17043 17165 3 + 123 hypothetical protein - none -
fig|6666666.230104.peg.613 CDS JNHN01000077.1 18587 17538 -2 - 1050 Thiamine-monophosphate kinase (EC 2.7.4.16) Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.230104.peg.614 CDS JNHN01000077.1 19358 18594 -2 - 765 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions
fig|6666666.230104.peg.615 CDS JNHN01000077.1 20334 19342 -3 - 993 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) - none -
fig|6666666.230104.peg.616 CDS JNHN01000077.1 22242 20473 -3 - 1770 Protease IV - none -
fig|6666666.230104.peg.617 CDS JNHN01000077.1 22972 22832 -1 - 141 hypothetical protein - none -
fig|6666666.230104.peg.618 CDS JNHN01000078.1 1937 531 -2 - 1407 FIG00405830: hypothetical protein - none -
fig|6666666.230104.peg.619 CDS JNHN01000079.1 424 194 -1 - 231 FIG00405109: hypothetical protein - none -
fig|6666666.230104.peg.620 CDS JNHN01000081.1 49 201 1 + 153 FIG00409900: hypothetical protein - none -
fig|6666666.230104.peg.621 CDS JNHN01000081.1 218 493 2 + 276 hypothetical protein - none -
fig|6666666.230104.peg.622 CDS JNHN01000081.1 490 1065 1 + 576 FIG00412175: hypothetical protein - none -
fig|6666666.230104.peg.623 CDS JNHN01000081.1 1069 1557 1 + 489 hypothetical protein - none -
fig|6666666.230104.peg.624 CDS JNHN01000081.1 1596 1802 3 + 207 FIG00409316: hypothetical protein - none -
fig|6666666.230104.peg.625 CDS JNHN01000081.1 1799 5446 2 + 3648 FIG00897168: hypothetical protein - none -
fig|6666666.230104.peg.626 CDS JNHN01000081.1 5448 5912 3 + 465 FIG00408295: hypothetical protein - none -
fig|6666666.230104.peg.627 CDS JNHN01000081.1 5934 9914 3 + 3981 FIG00407302: hypothetical protein - none -
fig|6666666.230104.peg.628 CDS JNHN01000081.1 9928 10215 1 + 288 FIG00405495: hypothetical protein - none -
fig|6666666.230104.peg.629 CDS JNHN01000081.1 10218 10931 3 + 714 hypothetical protein - none -
fig|6666666.230104.peg.630 CDS JNHN01000081.1 10934 11122 2 + 189 hypothetical protein - none -
fig|6666666.230104.peg.631 CDS JNHN01000081.1 11148 17699 3 + 6552 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.632 CDS JNHN01000081.1 18084 18938 3 + 855 SusD, outer membrane protein Cellulosome
fig|6666666.230104.peg.633 CDS JNHN01000081.1 19022 20218 2 + 1197 FIG00417587: hypothetical protein - none -
fig|6666666.230104.peg.634 CDS JNHN01000081.1 20234 21424 2 + 1191 FIG00411772: hypothetical protein - none -
fig|6666666.230104.peg.635 CDS JNHN01000082.1 628 356 -1 - 273 hypothetical protein - none -
fig|6666666.230104.peg.636 CDS JNHN01000082.1 1113 640 -3 - 474 hypothetical protein - none -
fig|6666666.230104.peg.637 CDS JNHN01000082.1 1363 1115 -1 - 249 hypothetical protein - none -
fig|6666666.230104.peg.638 CDS JNHN01000082.1 1986 1360 -3 - 627 hypothetical protein - none -
fig|6666666.230104.peg.639 CDS JNHN01000082.1 2864 1986 -2 - 879 FIG00409580: hypothetical protein - none -
fig|6666666.230104.peg.640 CDS JNHN01000082.1 4852 2903 -1 - 1950 hypothetical protein - none -
fig|6666666.230104.peg.641 CDS JNHN01000082.1 5326 4952 -1 - 375 hypothetical protein - none -
fig|6666666.230104.peg.642 CDS JNHN01000082.1 5306 5434 2 + 129 hypothetical protein - none -
fig|6666666.230104.peg.643 CDS JNHN01000082.1 5876 5460 -2 - 417 hypothetical protein - none -
fig|6666666.230104.peg.644 CDS JNHN01000082.1 6091 5885 -1 - 207 hypothetical protein - none -
fig|6666666.230104.peg.645 CDS JNHN01000082.1 7269 7051 -3 - 219 hypothetical protein - none -
fig|6666666.230104.peg.646 CDS JNHN01000082.1 8045 7599 -2 - 447 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.230104.peg.647 CDS JNHN01000082.1 11498 8247 -2 - 3252 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.648 CDS JNHN01000082.1 14149 11588 -1 - 2562 FIG00405611: hypothetical protein - none -
fig|6666666.230104.peg.649 CDS JNHN01000082.1 15586 14177 -1 - 1410 Arabinose-proton symporter L-Arabinose utilization
fig|6666666.230104.peg.650 CDS JNHN01000082.1 16386 15601 -3 - 786 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.230104.peg.651 CDS JNHN01000082.1 18142 16379 -1 - 1764 mannose-6-phosphate isomerase, class I - none -
fig|6666666.230104.peg.652 CDS JNHN01000082.1 19079 18126 -2 - 954 Glucokinase (EC 2.7.1.2) Glycolysis and Gluconeogenesis
fig|6666666.230104.peg.653 CDS JNHN01000082.1 19651 19082 -1 - 570 Glucose-6-phosphate isomerase, archaeal (EC 5.3.1.9) - none -
fig|6666666.230104.peg.654 CDS JNHN01000082.1 20712 19828 -3 - 885 transcriptional regulator - none -
fig|6666666.230104.peg.655 CDS JNHN01000082.1 20900 21790 2 + 891 putative transporter - none -
fig|6666666.230104.peg.656 CDS JNHN01000082.1 22436 21777 -2 - 660 FIG00408484: hypothetical protein - none -
fig|6666666.230104.peg.657 CDS JNHN01000082.1 22903 22433 -1 - 471 GAF domain-containing protein, involved in signal transduction - none -
fig|6666666.230104.peg.658 CDS JNHN01000082.1 23814 22915 -3 - 900 putative permease - none -
fig|6666666.230104.peg.659 CDS JNHN01000082.1 24654 23884 -3 - 771 tRNA pseudouridine synthase A (EC 4.2.1.70) Colicin V and Bacteriocin Production Cluster;
RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.230104.peg.660 CDS JNHN01000082.1 24947 24825 -2 - 123 hypothetical protein - none -
fig|6666666.230104.peg.661 CDS JNHN01000082.1 24832 25515 1 + 684 FIG00937167: hypothetical protein - none -
fig|6666666.230104.peg.662 CDS JNHN01000082.1 26096 25533 -2 - 564 hypothetical protein - none -
fig|6666666.230104.peg.663 CDS JNHN01000082.1 27637 26126 -1 - 1512 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.230104.peg.664 CDS JNHN01000082.1 27770 27645 -2 - 126 hypothetical protein - none -
fig|6666666.230104.peg.665 CDS JNHN01000082.1 28027 29565 1 + 1539 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.230104.peg.666 CDS JNHN01000082.1 29577 30143 3 + 567 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.230104.peg.667 CDS JNHN01000082.1 30189 30758 3 + 570 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.230104.peg.668 CDS JNHN01000082.1 30773 31954 2 + 1182 GTP-binding protein Obg CBSS-176279.3.peg.868
fig|6666666.230104.peg.669 CDS JNHN01000082.1 31951 32778 1 + 828 COG1496: Uncharacterized conserved protein - none -
fig|6666666.230104.peg.670 CDS JNHN01000082.1 32778 33443 3 + 666 FIG00935912: hypothetical protein - none -
fig|6666666.230104.peg.671 CDS JNHN01000082.1 33444 34103 3 + 660 Cell wall endopeptidase, family M23/M37 - none -
fig|6666666.230104.peg.672 CDS JNHN01000082.1 34174 35175 1 + 1002 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Inteins;
Phosphate metabolism;
Phosphate metabolism;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.230104.peg.673 CDS JNHN01000082.1 35203 36144 1 + 942 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.230104.peg.674 CDS JNHN01000082.1 36145 36882 1 + 738 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) - none -
fig|6666666.230104.peg.675 CDS JNHN01000082.1 36914 37468 2 + 555 FIG00406579: hypothetical protein - none -
fig|6666666.230104.peg.676 CDS JNHN01000082.1 37517 38263 2 + 747 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.230104.peg.677 CDS JNHN01000082.1 38263 39258 1 + 996 Hydrolases of the alpha/beta superfamily - none -
fig|6666666.230104.peg.678 CDS JNHN01000082.1 39299 40207 2 + 909 Beta-propeller domains of methanol dehydrogenase type - none -
fig|6666666.230104.peg.679 CDS JNHN01000082.1 40379 40960 2 + 582 LemA family protein - none -
fig|6666666.230104.peg.680 CDS JNHN01000082.1 41091 42242 3 + 1152 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.230104.peg.681 CDS JNHN01000082.1 42247 43359 1 + 1113 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.230104.peg.682 CDS JNHN01000082.1 43394 44224 2 + 831 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.230104.peg.683 CDS JNHN01000082.1 44231 45457 2 + 1227 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.230104.peg.684 CDS JNHN01000082.1 45542 46582 2 + 1041 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.191) - none -
fig|6666666.230104.peg.685 CDS JNHN01000082.1 46586 47971 2 + 1386 N-acetylglucosamine deacetylase (EC 3.5.1.-) / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.230104.peg.686 CDS JNHN01000082.1 48109 48885 1 + 777 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) Llipid A biosynthesis cluster
fig|6666666.230104.peg.687 CDS JNHN01000082.1 48934 49488 1 + 555 FIG00897033: hypothetical protein - none -
fig|6666666.230104.peg.688 CDS JNHN01000082.1 49597 50502 1 + 906 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.230104.peg.689 CDS JNHN01000082.1 51716 50478 -2 - 1239 FIG00407219: hypothetical protein - none -
fig|6666666.230104.peg.690 CDS JNHN01000082.1 52588 51818 -1 - 771 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes
fig|6666666.230104.peg.691 CDS JNHN01000082.1 54682 52601 -1 - 2082 Regulatory sensor-transducer, BlaR1/MecR1 family / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.692 CDS JNHN01000082.1 56598 54733 -3 - 1866 Thiol:disulfide interchange protein tlpA - none -
fig|6666666.230104.peg.693 CDS JNHN01000082.1 56990 56628 -2 - 363 Transcriptional repressor, BlaI/MecI family - none -
fig|6666666.230104.peg.694 CDS JNHN01000082.1 57201 57905 3 + 705 FIG00898025: hypothetical protein - none -
fig|6666666.230104.peg.695 CDS JNHN01000082.1 57895 58509 1 + 615 Transcriptional regulator - none -
fig|6666666.230104.peg.696 CDS JNHN01000082.1 60716 58941 -2 - 1776 Putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes
fig|6666666.230104.peg.697 CDS JNHN01000082.1 62175 61021 -3 - 1155 RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein - none -
fig|6666666.230104.peg.698 CDS JNHN01000082.1 62957 62241 -2 - 717 FIG00896915: hypothetical protein - none -
fig|6666666.230104.peg.699 CDS JNHN01000082.1 64193 62982 -2 - 1212 FIG00897404: hypothetical protein - none -
fig|6666666.230104.peg.700 CDS JNHN01000082.1 65656 64223 -1 - 1434 Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites - none -
fig|6666666.230104.peg.701 CDS JNHN01000082.1 66917 65766 -2 - 1152 FIG00405865: hypothetical protein - none -
fig|6666666.230104.peg.702 CDS JNHN01000082.1 68329 66947 -1 - 1383 FIG00896529: hypothetical protein - none -
fig|6666666.230104.peg.703 CDS JNHN01000082.1 68853 68647 -3 - 207 FIG00418171: hypothetical protein - none -
fig|6666666.230104.peg.704 CDS JNHN01000082.1 70278 68920 -3 - 1359 Hydrolase (HAD superfamily) - none -
fig|6666666.230104.peg.705 CDS JNHN01000082.1 71247 70291 -3 - 957 Membrane protease subunits, stomatin/prohibitin homologs - none -
fig|6666666.230104.peg.706 CDS JNHN01000082.1 74040 71446 -3 - 2595 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.707 CDS JNHN01000082.1 76534 74129 -1 - 2406 FIG00409332: hypothetical protein - none -
fig|6666666.230104.peg.708 CDS JNHN01000082.1 78380 76707 -2 - 1674 FIG00414760: hypothetical protein - none -
fig|6666666.230104.peg.709 CDS JNHN01000082.1 79536 78367 -3 - 1170 Cystathionine beta-lyase, Bsu PatB (EC 4.4.1.8) - none -
fig|6666666.230104.peg.710 CDS JNHN01000082.1 80236 79622 -1 - 615 FIG00415643: hypothetical protein - none -
fig|6666666.230104.peg.711 CDS JNHN01000082.1 81126 80233 -3 - 894 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.230104.peg.712 CDS JNHN01000082.1 81214 82014 1 + 801 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.230104.peg.713 CDS JNHN01000082.1 82027 83769 1 + 1743 putative helicase - none -
fig|6666666.230104.peg.714 CDS JNHN01000082.1 83838 84452 3 + 615 Hypothetical YciO protein, TsaC/YrdC paralog - none -
fig|6666666.230104.peg.715 CDS JNHN01000082.1 84529 85551 1 + 1023 membrane protein, putative - none -
fig|6666666.230104.peg.716 CDS JNHN01000082.1 86761 85556 -1 - 1206 FIG00403110: hypothetical protein - none -
fig|6666666.230104.peg.717 CDS JNHN01000082.1 87668 86820 -2 - 849 serine/threonine kinase - none -
fig|6666666.230104.peg.718 CDS JNHN01000082.1 89077 87767 -1 - 1311 putative hemolysin secretion protein - none -
fig|6666666.230104.peg.719 CDS JNHN01000082.1 91285 89081 -1 - 2205 ABC transporter ATP-binding protein - none -
fig|6666666.230104.peg.720 CDS JNHN01000084.1 290 123 -2 - 168 hypothetical protein - none -
fig|6666666.230104.peg.721 CDS JNHN01000084.1 1257 556 -3 - 702 hypothetical protein - none -
fig|6666666.230104.peg.722 CDS JNHN01000085.1 46 729 1 + 684 Transcription regulator [contains diacylglycerol kinase catalytic domain] - none -
fig|6666666.230104.peg.723 CDS JNHN01000086.1 219 476 3 + 258 hypothetical protein - none -
fig|6666666.230104.peg.724 CDS JNHN01000086.1 1951 683 -1 - 1269 transposase - none -
fig|6666666.230104.peg.725 CDS JNHN01000087.1 1926 475 -3 - 1452 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.230104.peg.726 CDS JNHN01000088.1 2318 3508 2 + 1191 Integrase - none -
fig|6666666.230104.peg.727 CDS JNHN01000088.1 3848 3976 2 + 129 hypothetical protein - none -
fig|6666666.230104.peg.728 CDS JNHN01000090.1 93 857 3 + 765 hypothetical protein - none -
fig|6666666.230104.peg.729 CDS JNHN01000090.1 1367 906 -2 - 462 FIG00409343: hypothetical protein - none -
fig|6666666.230104.peg.730 CDS JNHN01000090.1 1946 1422 -2 - 525 FIG00405798: hypothetical protein - none -
fig|6666666.230104.peg.731 CDS JNHN01000090.1 2319 3020 3 + 702 hypothetical protein - none -
fig|6666666.230104.peg.732 CDS JNHN01000090.1 3085 4182 1 + 1098 hypothetical protein - none -
fig|6666666.230104.peg.733 CDS JNHN01000090.1 5822 4410 -2 - 1413 Major outer membrane protein OmpA - none -
fig|6666666.230104.peg.734 CDS JNHN01000090.1 7431 5995 -3 - 1437 FIG00898120: hypothetical protein - none -
fig|6666666.230104.peg.735 CDS JNHN01000090.1 8505 7681 -3 - 825 hypothetical protein - none -
fig|6666666.230104.peg.736 CDS JNHN01000090.1 8989 8561 -1 - 429 hypothetical protein - none -
fig|6666666.230104.peg.737 CDS JNHN01000090.1 9440 9090 -2 - 351 hypothetical protein - none -
fig|6666666.230104.peg.738 CDS JNHN01000090.1 9887 9441 -2 - 447 hypothetical protein - none -
fig|6666666.230104.peg.739 CDS JNHN01000090.1 10869 9904 -3 - 966 hypothetical protein - none -
fig|6666666.230104.peg.740 CDS JNHN01000090.1 11387 11974 2 + 588 hypothetical protein - none -
fig|6666666.230104.peg.741 CDS JNHN01000090.1 12374 12069 -2 - 306 hypothetical protein - none -
fig|6666666.230104.peg.742 CDS JNHN01000090.1 12613 12371 -1 - 243 hypothetical protein - none -
fig|6666666.230104.peg.743 CDS JNHN01000090.1 12911 12627 -2 - 285 hypothetical protein - none -
fig|6666666.230104.peg.744 CDS JNHN01000090.1 12928 13185 1 + 258 hypothetical protein - none -
fig|6666666.230104.peg.745 CDS JNHN01000090.1 13378 13536 1 + 159 hypothetical protein - none -
fig|6666666.230104.peg.746 CDS JNHN01000090.1 13828 13712 -1 - 117 hypothetical protein - none -
fig|6666666.230104.peg.747 CDS JNHN01000090.1 15518 13842 -2 - 1677 Chromosome (plasmid) partitioning protein ParB Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.230104.peg.748 CDS JNHN01000090.1 15746 15591 -2 - 156 hypothetical protein - none -
fig|6666666.230104.peg.749 CDS JNHN01000090.1 16048 16212 1 + 165 hypothetical protein - none -
fig|6666666.230104.peg.750 CDS JNHN01000090.1 21291 16315 -3 - 4977 putative DNA methylase - none -
fig|6666666.230104.peg.751 CDS JNHN01000090.1 22203 21742 -3 - 462 hypothetical protein - none -
fig|6666666.230104.peg.752 CDS JNHN01000090.1 22481 22365 -2 - 117 hypothetical protein - none -
fig|6666666.230104.peg.753 CDS JNHN01000090.1 22701 22507 -3 - 195 hypothetical protein - none -
fig|6666666.230104.peg.754 CDS JNHN01000090.1 23053 22751 -1 - 303 hypothetical protein - none -
fig|6666666.230104.peg.755 CDS JNHN01000090.1 23306 23064 -2 - 243 hypothetical protein - none -
fig|6666666.230104.peg.756 CDS JNHN01000090.1 23463 23332 -3 - 132 hypothetical protein - none -
fig|6666666.230104.peg.757 CDS JNHN01000090.1 24095 23715 -2 - 381 hypothetical protein - none -
fig|6666666.230104.peg.758 CDS JNHN01000090.1 24401 24282 -2 - 120 hypothetical protein - none -
fig|6666666.230104.peg.759 CDS JNHN01000090.1 24902 25711 2 + 810 hypothetical protein - none -
fig|6666666.230104.peg.760 CDS JNHN01000090.1 26780 25995 -2 - 786 Tyrosine type site-specific recombinase, Mpi regulator - none -
fig|6666666.230104.peg.761 CDS JNHN01000090.1 27509 26925 -2 - 585 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230104.peg.762 CDS JNHN01000090.1 28946 27597 -2 - 1350 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230104.peg.763 CDS JNHN01000090.1 29527 29940 1 + 414 hypothetical protein - none -
fig|6666666.230104.peg.764 CDS JNHN01000090.1 30036 30683 3 + 648 DedA protein Colicin V and Bacteriocin Production Cluster;
DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.230104.peg.765 CDS JNHN01000090.1 30712 31359 1 + 648 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.230104.peg.766 CDS JNHN01000090.1 31372 32385 1 + 1014 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.230104.peg.767 CDS JNHN01000090.1 32518 34149 1 + 1632 putative membrane protein - none -
fig|6666666.230104.peg.768 CDS JNHN01000090.1 34204 36192 1 + 1989 Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.230104.peg.769 CDS JNHN01000090.1 37480 36194 -1 - 1287 FIG00405852: hypothetical protein - none -
fig|6666666.230104.peg.770 CDS JNHN01000090.1 39036 37489 -3 - 1548 N-acetylgalactosamine-6-sulfatase - none -
fig|6666666.230104.peg.771 CDS JNHN01000090.1 40749 39091 -3 - 1659 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.230104.peg.772 CDS JNHN01000090.1 43256 40851 -2 - 2406 putative ferric aerobactin receptor - none -
fig|6666666.230104.peg.773 CDS JNHN01000090.1 44362 43286 -1 - 1077 GDP-L-fucose synthetase (EC 1.1.1.271) Capsular heptose biosynthesis
fig|6666666.230104.peg.774 CDS JNHN01000090.1 45465 44389 -3 - 1077 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) Capsular heptose biosynthesis
fig|6666666.230104.peg.775 CDS JNHN01000090.1 46700 45540 -2 - 1161 Na+/H+-dicarboxylate symporter - none -
fig|6666666.230104.peg.776 CDS JNHN01000091.1 12 959 3 + 948 hypothetical protein - none -
fig|6666666.230104.peg.777 CDS JNHN01000091.1 959 1570 2 + 612 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation;
Ribosome biogenesis bacterial
fig|6666666.230104.peg.778 CDS JNHN01000091.1 1973 1824 -2 - 150 hypothetical protein - none -
fig|6666666.230104.peg.779 CDS JNHN01000092.1 7 1485 1 + 1479 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230104.peg.780 CDS JNHN01000093.1 1959 955 -3 - 1005 Putative ion-channel protein - none -
fig|6666666.230104.peg.781 CDS JNHN01000093.1 4464 1978 -3 - 2487 Cellobiose phosphorylase (EC 2.4.1.-) - none -
fig|6666666.230104.peg.782 CDS JNHN01000093.1 4634 4479 -2 - 156 hypothetical protein - none -
fig|6666666.230104.peg.783 CDS JNHN01000093.1 4688 7132 2 + 2445 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.784 CDS JNHN01000093.1 7437 8324 3 + 888 Transcriptional regulator of various polyols utilization, AraC family - none -
fig|6666666.230104.peg.785 CDS JNHN01000093.1 8397 9680 3 + 1284 FIG00937556: hypothetical protein - none -
fig|6666666.230104.peg.786 CDS JNHN01000093.1 9772 11064 1 + 1293 Endo-1,4-beta-mannosidase Mannose Metabolism
fig|6666666.230104.peg.787 CDS JNHN01000093.1 11198 12148 2 + 951 Endoglucanase 5A (EC 3.2.1.4) (Endo-1,4-beta-glucanase 5A) (Alkaline cellulase) - none -
fig|6666666.230104.peg.788 CDS JNHN01000093.1 12212 12325 2 + 114 hypothetical protein - none -
fig|6666666.230104.peg.789 CDS JNHN01000093.1 12383 15649 2 + 3267 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.790 CDS JNHN01000093.1 15670 17391 1 + 1722 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.791 CDS JNHN01000093.1 17396 18709 2 + 1314 FIG00417257: hypothetical protein - none -
fig|6666666.230104.peg.792 CDS JNHN01000093.1 18731 20716 2 + 1986 FIG00410329: hypothetical protein - none -
fig|6666666.230104.peg.793 CDS JNHN01000093.1 20784 22481 3 + 1698 Mannan endo-1,4-beta-mannosidase B precursor (EC 3.2.1.78) - none -
fig|6666666.230104.peg.794 CDS JNHN01000093.1 22920 26135 3 + 3216 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.795 CDS JNHN01000093.1 26148 27917 3 + 1770 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.796 CDS JNHN01000093.1 27905 28801 2 + 897 FIG00416167: hypothetical protein - none -
fig|6666666.230104.peg.797 CDS JNHN01000093.1 28871 29593 2 + 723 hypothetical protein - none -
fig|6666666.230104.peg.798 CDS JNHN01000093.1 29871 29758 -3 - 114 hypothetical protein - none -
fig|6666666.230104.peg.799 CDS JNHN01000093.1 30582 29914 -3 - 669 putative DNA-binding protein - none -
fig|6666666.230104.peg.800 CDS JNHN01000093.1 30914 32242 2 + 1329 putative helicase - none -
fig|6666666.230104.peg.801 CDS JNHN01000093.1 32474 33631 2 + 1158 RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein - none -
fig|6666666.230104.peg.802 CDS JNHN01000093.1 33711 34325 3 + 615 FIG00896332: hypothetical protein - none -
fig|6666666.230104.peg.803 CDS JNHN01000093.1 34351 35748 1 + 1398 FIG00897658: hypothetical protein - none -
fig|6666666.230104.peg.804 CDS JNHN01000093.1 35767 37227 1 + 1461 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.230104.peg.805 CDS JNHN01000093.1 37278 39044 3 + 1767 FIG00897120: hypothetical protein - none -
fig|6666666.230104.peg.806 CDS JNHN01000093.1 39046 40515 1 + 1470 FIG00899022: hypothetical protein - none -
fig|6666666.230104.peg.807 CDS JNHN01000093.1 40632 41762 3 + 1131 Mannan endo-1,4-beta-mannosidase - none -
fig|6666666.230104.peg.808 CDS JNHN01000093.1 41785 42957 1 + 1173 COG2152 predicted glycoside hydrolase - none -
fig|6666666.230104.peg.809 CDS JNHN01000093.1 42975 44354 3 + 1380 Xyloside transporter XynT Xylose utilization
fig|6666666.230104.peg.810 CDS JNHN01000093.1 44395 45582 1 + 1188 N-acylglucosamine 2-epimerase (EC 5.1.3.8) Sialic Acid Metabolism
fig|6666666.230104.peg.811 CDS JNHN01000093.1 45613 46236 1 + 624 FIG00412864: hypothetical protein - none -
fig|6666666.230104.peg.812 CDS JNHN01000093.1 47762 46389 -2 - 1374 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.230104.peg.813 CDS JNHN01000094.1 2025 1669 -3 - 357 probable beta-D-galactosidase Galactosylceramide and Sulfatide metabolism
fig|6666666.230104.peg.814 CDS JNHN01000095.1 1610 687 -2 - 924 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.815 CDS JNHN01000095.1 2012 1647 -2 - 366 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.816 CDS JNHN01000096.1 81 386 3 + 306 Unknown pentose kinase TM0952 - none -
fig|6666666.230104.peg.817 CDS JNHN01000096.1 443 1849 2 + 1407 Unknown pentose isomerase TM0951 - none -
fig|6666666.230104.peg.818 CDS JNHN01000096.1 1886 2902 2 + 1017 L-rhamnose-proton symporter - none -
fig|6666666.230104.peg.819 CDS JNHN01000096.1 2978 6034 2 + 3057 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.820 CDS JNHN01000096.1 6055 7602 1 + 1548 RagB/SusD domain protein - none -
fig|6666666.230104.peg.821 CDS JNHN01000096.1 7624 9165 1 + 1542 hypothetical protein - none -
fig|6666666.230104.peg.822 CDS JNHN01000096.1 9201 10397 3 + 1197 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230104.peg.823 CDS JNHN01000096.1 10411 12747 1 + 2337 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.824 CDS JNHN01000096.1 12986 14527 2 + 1542 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.230104.peg.825 CDS JNHN01000096.1 14635 15273 1 + 639 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.230104.peg.826 CDS JNHN01000096.1 17255 15360 -2 - 1896 Beta-lactamase (Cephalosporinase) (EC 3.5.2.6) Beta-lactamase
fig|6666666.230104.peg.827 CDS JNHN01000096.1 18093 17284 -3 - 810 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.230104.peg.828 CDS JNHN01000096.1 18986 18147 -2 - 840 FIG00404118: hypothetical protein - none -
fig|6666666.230104.peg.829 CDS JNHN01000096.1 20300 19116 -2 - 1185 N-acetylglucosamine related transporter, NagX - none -
fig|6666666.230104.peg.830 CDS JNHN01000096.1 23294 20334 -2 - 2961 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing - none -
fig|6666666.230104.peg.831 CDS JNHN01000096.1 24661 23471 -1 - 1191 alternate gene name: yzbB - none -
fig|6666666.230104.peg.832 CDS JNHN01000096.1 26083 24761 -1 - 1323 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.230104.peg.833 CDS JNHN01000096.1 27430 26111 -1 - 1320 Amidase enhancer - none -
fig|6666666.230104.peg.834 CDS JNHN01000096.1 28404 27472 -3 - 933 putative glycosyltransferase - possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide Rhamnose containing glycans
fig|6666666.230104.peg.835 CDS JNHN01000096.1 29866 28406 -1 - 1461 Putative glycosyltransferase CBSS-296591.1.peg.2330
fig|6666666.230104.peg.836 CDS JNHN01000096.1 31720 29891 -1 - 1830 Serine/threonine protein kinase related protein - none -
fig|6666666.230104.peg.837 CDS JNHN01000096.1 34892 31770 -2 - 3123 Xanthan lyase - none -
fig|6666666.230104.peg.838 CDS JNHN01000096.1 36362 34908 -2 - 1455 sodium/iodide co-transporter - none -
fig|6666666.230104.peg.839 CDS JNHN01000096.1 37798 36536 -1 - 1263 alternate gene name: yzbB - none -
fig|6666666.230104.peg.840 CDS JNHN01000096.1 40025 37932 -2 - 2094 putative helicase - none -
fig|6666666.230104.peg.841 CDS JNHN01000096.1 40397 41020 2 + 624 putative DNA-binding protein - none -
fig|6666666.230104.peg.842 CDS JNHN01000096.1 41477 41169 -2 - 309 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.230104.peg.843 CDS JNHN01000096.1 41753 41481 -2 - 273 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.230104.peg.844 CDS JNHN01000096.1 43397 41844 -2 - 1554 hypothetical protein - none -
fig|6666666.230104.peg.845 CDS JNHN01000096.1 45252 43606 -3 - 1647 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.846 CDS JNHN01000096.1 48616 45314 -1 - 3303 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.847 CDS JNHN01000096.1 49284 49961 3 + 678 FIG00404118: hypothetical protein - none -
fig|6666666.230104.peg.848 CDS JNHN01000096.1 50090 49941 -2 - 150 hypothetical protein - none -
fig|6666666.230104.peg.849 CDS JNHN01000096.1 50374 53715 1 + 3342 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.850 CDS JNHN01000096.1 53735 55633 2 + 1899 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.851 CDS JNHN01000096.1 56713 55706 -1 - 1008 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.230104.peg.852 CDS JNHN01000096.1 56868 58997 3 + 2130 Na+/H+ antiporter - none -
fig|6666666.230104.peg.853 CDS JNHN01000096.1 59047 59766 1 + 720 Molybdopterin biosynthesis protein MoeB - none -
fig|6666666.230104.peg.854 CDS JNHN01000096.1 59831 60490 2 + 660 Lipoprotein releasing system ATP-binding protein LolD Lipoprotein sorting system
fig|6666666.230104.peg.855 CDS JNHN01000096.1 62805 60493 -3 - 2313 FIG00404599: hypothetical protein - none -
fig|6666666.230104.peg.856 CDS JNHN01000096.1 63892 62942 -1 - 951 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230104.peg.857 CDS JNHN01000096.1 65266 63899 -1 - 1368 Putative sodium-dependent transporter - none -
fig|6666666.230104.peg.858 CDS JNHN01000096.1 65370 65753 3 + 384 FIG00405104: hypothetical protein - none -
fig|6666666.230104.peg.859 CDS JNHN01000096.1 67054 65756 -1 - 1299 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.230104.peg.860 CDS JNHN01000096.1 67239 68090 3 + 852 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.230104.peg.861 CDS JNHN01000096.1 68117 68881 2 + 765 Diadenylate cyclase spyDAC; Bacterial checkpoint controller DisA with nucleotide-binding domain Bacterial checkpoint-control-related cluster;
Bacterial checkpoint-control-related cluster
fig|6666666.230104.peg.862 CDS JNHN01000096.1 68965 70503 1 + 1539 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.230104.peg.863 CDS JNHN01000096.1 70526 71845 2 + 1320 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.230104.peg.864 CDS JNHN01000096.1 72867 71848 -3 - 1020 PhnO protein - none -
fig|6666666.230104.peg.865 CDS JNHN01000096.1 73821 72907 -3 - 915 FIG00406100: hypothetical protein - none -
fig|6666666.230104.peg.866 CDS JNHN01000096.1 74569 73874 -1 - 696 LrgA-associated membrane protein LrgB Murein hydrolase regulation and cell death
fig|6666666.230104.peg.867 CDS JNHN01000096.1 74904 74566 -3 - 339 Antiholin-like protein LrgA Murein hydrolase regulation and cell death
fig|6666666.230104.peg.868 CDS JNHN01000096.1 74921 75040 2 + 120 hypothetical protein - none -
fig|6666666.230104.peg.869 CDS JNHN01000096.1 75227 76246 2 + 1020 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.230104.peg.870 CDS JNHN01000096.1 76268 77464 2 + 1197 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.230104.peg.871 CDS JNHN01000096.1 77657 79045 2 + 1389 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.230104.peg.872 CDS JNHN01000096.1 79364 79152 -2 - 213 FIG00410184: hypothetical protein - none -
fig|6666666.230104.peg.873 CDS JNHN01000096.1 81320 79464 -2 - 1857 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.230104.peg.874 CDS JNHN01000096.1 82132 81362 -1 - 771 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) Llipid A biosynthesis cluster
fig|6666666.230104.peg.875 CDS JNHN01000096.1 82477 82166 -1 - 312 probably aromatic ring hydroxylating enzyme, evidenced by COGnitor; PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.230104.peg.876 CDS JNHN01000096.1 83513 82827 -2 - 687 DNA repair protein RadC Bacterial cell division cluster;
DNA repair, bacterial
fig|6666666.230104.peg.877 CDS JNHN01000096.1 84312 83545 -3 - 768 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230104.peg.878 CDS JNHN01000097.1 541 3471 1 + 2931 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.879 CDS JNHN01000097.1 3491 5125 2 + 1635 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.880 CDS JNHN01000097.1 5157 5933 3 + 777 FIG00405392: hypothetical protein - none -
fig|6666666.230104.peg.881 CDS JNHN01000097.1 6121 7377 1 + 1257 GTP-binding protein HflX Hfl operon
fig|6666666.230104.peg.882 CDS JNHN01000097.1 7486 9477 1 + 1992 FIG00898950: hypothetical protein - none -
fig|6666666.230104.peg.883 CDS JNHN01000097.1 9611 10957 2 + 1347 Fumarate hydratase class I, anaerobic (EC 4.2.1.2) Serine-glyoxylate cycle
fig|6666666.230104.peg.884 CDS JNHN01000097.1 10942 11250 1 + 309 Fumarate hydratase class I (EC 4.2.1.2) TCA Cycle
fig|6666666.230104.peg.885 CDS JNHN01000097.1 11622 12779 3 + 1158 Integral membrane protein - none -
fig|6666666.230104.peg.886 CDS JNHN01000097.1 14467 12827 -1 - 1641 Amino acid permease - none -
fig|6666666.230104.peg.887 CDS JNHN01000097.1 15841 14516 -1 - 1326 Agglutination protein - none -
fig|6666666.230104.peg.888 CDS JNHN01000097.1 18870 15838 -3 - 3033 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.889 CDS JNHN01000097.1 19993 18911 -1 - 1083 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.230104.peg.890 CDS JNHN01000097.1 21008 20115 -2 - 894 Ribosome small subunit-stimulated GTPase EngC - none -
fig|6666666.230104.peg.891 CDS JNHN01000097.1 21666 21154 -3 - 513 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.230104.peg.892 CDS JNHN01000097.1 22538 21828 -2 - 711 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.230104.peg.893 CDS JNHN01000097.1 23137 22622 -1 - 516 FIG00897869: hypothetical protein - none -
fig|6666666.230104.peg.894 CDS JNHN01000097.1 24098 23160 -2 - 939 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.230104.peg.895 CDS JNHN01000097.1 26709 24187 -3 - 2523 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.230104.peg.896 CDS JNHN01000097.1 28313 26940 -2 - 1374 DNA-damage-inducible protein F - none -
fig|6666666.230104.peg.897 CDS JNHN01000097.1 28472 29137 2 + 666 TPR-domain containing protein - none -
fig|6666666.230104.peg.898 CDS JNHN01000097.1 33233 29178 -2 - 4056 DNA-binding response regulator, AraC family - none -
fig|6666666.230104.peg.899 CDS JNHN01000097.1 34258 33488 -1 - 771 hypothetical protein - none -
fig|6666666.230104.peg.900 CDS JNHN01000098.1 70 513 1 + 444 hypothetical protein - none -
fig|6666666.230104.peg.901 CDS JNHN01000098.1 1304 1176 -2 - 129 hypothetical protein - none -
fig|6666666.230104.peg.902 CDS JNHN01000098.1 1587 1315 -3 - 273 hypothetical protein - none -
fig|6666666.230104.peg.903 CDS JNHN01000098.1 2713 1988 -1 - 726 hypothetical protein - none -
fig|6666666.230104.peg.904 CDS JNHN01000098.1 3677 2682 -2 - 996 hypothetical protein - none -
fig|6666666.230104.peg.905 CDS JNHN01000098.1 4002 3718 -3 - 285 hypothetical protein - none -
fig|6666666.230104.peg.906 CDS JNHN01000098.1 5178 4021 -3 - 1158 hypothetical protein - none -
fig|6666666.230104.peg.907 CDS JNHN01000098.1 6611 5181 -2 - 1431 Phage-related protein - none -
fig|6666666.230104.peg.908 CDS JNHN01000098.1 7092 6613 -3 - 480 hypothetical protein - none -
fig|6666666.230104.peg.909 CDS JNHN01000098.1 7883 7089 -2 - 795 hypothetical protein - none -
fig|6666666.230104.peg.910 CDS JNHN01000098.1 8914 7880 -1 - 1035 hypothetical protein - none -
fig|6666666.230104.peg.911 CDS JNHN01000098.1 10269 8914 -3 - 1356 hypothetical protein - none -
fig|6666666.230104.peg.912 CDS JNHN01000098.1 10547 10269 -2 - 279 hypothetical protein - none -
fig|6666666.230104.peg.913 CDS JNHN01000098.1 11603 10557 -2 - 1047 hypothetical protein - none -
fig|6666666.230104.peg.914 CDS JNHN01000098.1 12106 11627 -1 - 480 hypothetical protein - none -
fig|6666666.230104.peg.915 CDS JNHN01000098.1 12671 12111 -2 - 561 hypothetical protein - none -
fig|6666666.230104.peg.916 CDS JNHN01000098.1 12787 12668 -1 - 120 hypothetical protein - none -
fig|6666666.230104.peg.917 CDS JNHN01000098.1 13430 12840 -2 - 591 DNA repair protein RadC Bacterial cell division cluster;
DNA repair, bacterial
fig|6666666.230104.peg.918 CDS JNHN01000098.1 14010 13450 -3 - 561 putative ribose phosphate pyrophosphokinase - none -
fig|6666666.230104.peg.919 CDS JNHN01000098.1 14735 14568 -2 - 168 hypothetical protein - none -
fig|6666666.230104.peg.920 CDS JNHN01000098.1 16564 14837 -1 - 1728 hypothetical protein - none -
fig|6666666.230104.peg.921 CDS JNHN01000098.1 16729 16577 -1 - 153 hypothetical protein - none -
fig|6666666.230104.peg.922 CDS JNHN01000098.1 17096 16800 -2 - 297 hypothetical protein - none -
fig|6666666.230104.peg.923 CDS JNHN01000100.1 2324 1722 -2 - 603 hypothetical protein - none -
fig|6666666.230104.peg.924 CDS JNHN01000104.1 304 74 -1 - 231 FIG00405109: hypothetical protein - none -
fig|6666666.230104.peg.925 CDS JNHN01000105.1 1550 534 -2 - 1017 type II DNA modification methyltransferase, putative - none -
fig|6666666.230104.peg.926 CDS JNHN01000105.1 3013 1802 -1 - 1212 Integrase - none -
fig|6666666.230104.peg.927 CDS JNHN01000105.1 3807 3019 -3 - 789 hypothetical protein - none -
fig|6666666.230104.peg.928 CDS JNHN01000105.1 4856 3804 -2 - 1053 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.929 CDS JNHN01000105.1 5203 4853 -1 - 351 Mobile element protein - none -
fig|6666666.230104.peg.930 CDS JNHN01000105.1 5296 5409 1 + 114 hypothetical protein - none -
fig|6666666.230104.peg.931 CDS JNHN01000105.1 6099 5380 -3 - 720 hypothetical protein - none -
fig|6666666.230104.peg.932 CDS JNHN01000105.1 6445 6134 -1 - 312 hypothetical protein - none -
fig|6666666.230104.peg.933 CDS JNHN01000105.1 7809 6619 -3 - 1191 hypothetical protein - none -
fig|6666666.230104.peg.934 CDS JNHN01000105.1 9190 7820 -1 - 1371 integrase - none -
fig|6666666.230104.peg.935 CDS JNHN01000105.1 9381 11996 3 + 2616 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.936 CDS JNHN01000105.1 12020 13822 2 + 1803 SusD, outer membrane protein Cellulosome
fig|6666666.230104.peg.937 CDS JNHN01000105.1 13845 15023 3 + 1179 FIG00409457: hypothetical protein - none -
fig|6666666.230104.peg.938 CDS JNHN01000105.1 15050 15184 2 + 135 hypothetical protein - none -
fig|6666666.230104.peg.939 CDS JNHN01000106.1 309 94 -3 - 216 hypothetical protein - none -
fig|6666666.230104.peg.940 CDS JNHN01000107.1 1225 65 -1 - 1161 glycosyltransferase - none -
fig|6666666.230104.peg.941 CDS JNHN01000107.1 1571 1434 -2 - 138 hypothetical protein - none -
fig|6666666.230104.peg.942 CDS JNHN01000107.1 2534 1836 -2 - 699 Protein-tyrosine-phosphatase (EC 3.1.3.48) - none -
fig|6666666.230104.peg.943 CDS JNHN01000107.1 5014 2594 -1 - 2421 Tyrosine-protein kinase Wzc (EC 2.7.10.2) CBSS-258594.1.peg.3339
fig|6666666.230104.peg.944 CDS JNHN01000107.1 5820 5029 -3 - 792 Polysaccharide export outer membrane protein - none -
fig|6666666.230104.peg.945 CDS JNHN01000107.1 6955 5834 -1 - 1122 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230104.peg.946 CDS JNHN01000107.1 7578 7018 -3 - 561 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230104.peg.947 CDS JNHN01000107.1 8318 8154 -2 - 165 hypothetical protein - none -
fig|6666666.230104.peg.948 CDS JNHN01000107.1 9089 8358 -2 - 732 Mobile element protein - none -
fig|6666666.230104.peg.949 CDS JNHN01000108.1 243 449 3 + 207 hypothetical protein - none -
fig|6666666.230104.peg.950 CDS JNHN01000108.1 472 732 1 + 261 FIG00407477: hypothetical protein - none -
fig|6666666.230104.peg.951 CDS JNHN01000108.1 1992 862 -3 - 1131 putative helicase - none -
fig|6666666.230104.peg.952 CDS JNHN01000109.1 13 945 1 + 933 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.953 CDS JNHN01000109.1 1106 5173 2 + 4068 DNA-binding response regulator, AraC family - none -
fig|6666666.230104.peg.954 CDS JNHN01000109.1 5196 9452 3 + 4257 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.955 CDS JNHN01000109.1 12162 9547 -3 - 2616 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.230104.peg.956 CDS JNHN01000109.1 13602 12871 -3 - 732 Prohibitin - none -
fig|6666666.230104.peg.957 CDS JNHN01000109.1 13925 14062 2 + 138 hypothetical protein - none -
fig|6666666.230104.peg.958 CDS JNHN01000109.1 14566 14105 -1 - 462 FIG00410772: hypothetical protein - none -
fig|6666666.230104.peg.959 CDS JNHN01000109.1 15579 15223 -3 - 357 FIG00418096: hypothetical protein - none -
fig|6666666.230104.peg.960 CDS JNHN01000109.1 15779 17044 2 + 1266 FIG00413271: hypothetical protein - none -
fig|6666666.230104.peg.961 CDS JNHN01000109.1 18114 17248 -3 - 867 FIG00418058: hypothetical protein - none -
fig|6666666.230104.peg.962 CDS JNHN01000109.1 18923 18225 -2 - 699 Transcriptional regulatory protein rprY - none -
fig|6666666.230104.peg.963 CDS JNHN01000109.1 19347 19568 3 + 222 hypothetical protein - none -
fig|6666666.230104.peg.964 CDS JNHN01000109.1 21796 19571 -1 - 2226 two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.965 CDS JNHN01000109.1 24047 21933 -2 - 2115 FIG00411497: hypothetical protein - none -
fig|6666666.230104.peg.966 CDS JNHN01000109.1 25875 24316 -3 - 1560 hypothetical protein - none -
fig|6666666.230104.peg.967 CDS JNHN01000109.1 26913 26035 -3 - 879 similarity with cytochrome c-type biogenesis protein CcdA - none -
fig|6666666.230104.peg.968 CDS JNHN01000109.1 27605 26925 -2 - 681 hypothetical protein - none -
fig|6666666.230104.peg.969 CDS JNHN01000109.1 27746 27627 -2 - 120 hypothetical protein - none -
fig|6666666.230104.peg.970 CDS JNHN01000109.1 29176 28538 -1 - 639 hypothetical protein - none -
fig|6666666.230104.peg.971 CDS JNHN01000109.1 31412 29424 -2 - 1989 hypothetical protein - none -
fig|6666666.230104.peg.972 CDS JNHN01000109.1 34988 31473 -2 - 3516 Alpha-mannosidase (EC 3.2.1.24) Mannose Metabolism
fig|6666666.230104.peg.973 CDS JNHN01000109.1 36290 35118 -2 - 1173 putative alpha-1,6-mannanase - none -
fig|6666666.230104.peg.974 CDS JNHN01000109.1 37387 36314 -1 - 1074 carbohydrate-binding protein - none -
fig|6666666.230104.peg.975 CDS JNHN01000109.1 39425 37482 -2 - 1944 FIG00939684: hypothetical protein - none -
fig|6666666.230104.peg.976 CDS JNHN01000109.1 40396 39548 -1 - 849 FIG00414252: hypothetical protein - none -
fig|6666666.230104.peg.977 CDS JNHN01000109.1 42291 40447 -3 - 1845 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.978 CDS JNHN01000109.1 45472 42386 -1 - 3087 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.979 CDS JNHN01000109.1 46668 45652 -3 - 1017 FIG00414347: hypothetical protein - none -
fig|6666666.230104.peg.980 CDS JNHN01000109.1 46669 46818 1 + 150 hypothetical protein - none -
fig|6666666.230104.peg.981 CDS JNHN01000109.1 48256 46877 -1 - 1380 FIG01093382: hypothetical protein - none -
fig|6666666.230104.peg.982 CDS JNHN01000109.1 48852 48427 -3 - 426 Maltodextrin glucosidase (EC 3.2.1.20) Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.983 CDS JNHN01000110.1 949 131 -1 - 819 Hemolysin A - none -
fig|6666666.230104.peg.984 CDS JNHN01000110.1 1165 1668 1 + 504 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.985 CDS JNHN01000112.1 93 212 3 + 120 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230104.peg.986 CDS JNHN01000112.1 251 1078 2 + 828 Polysaccharide export outer membrane protein - none -
fig|6666666.230104.peg.987 CDS JNHN01000113.1 82 1242 1 + 1161 Rhamnulokinase (EC 2.7.1.5) - none -
fig|6666666.230104.peg.988 CDS JNHN01000114.1 1 927 1 + 927 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Colicin V and Bacteriocin Production Cluster;
Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.230104.peg.989 CDS JNHN01000115.1 1136 225 -2 - 912 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230104.peg.990 CDS JNHN01000115.1 3617 1263 -2 - 2355 FIG00896779: hypothetical protein - none -
fig|6666666.230104.peg.991 CDS JNHN01000115.1 8162 3627 -2 - 4536 FIG00938273: hypothetical protein - none -
fig|6666666.230104.peg.992 CDS JNHN01000115.1 10579 8285 -1 - 2295 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.993 CDS JNHN01000115.1 11927 10584 -2 - 1344 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.994 CDS JNHN01000115.1 13167 11929 -3 - 1239 putative zinc protease - none -
fig|6666666.230104.peg.995 CDS JNHN01000115.1 14031 13192 -3 - 840 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Queuosine-Archaeosine Biosynthesis
fig|6666666.230104.peg.996 CDS JNHN01000115.1 14125 15552 1 + 1428 RteB, two-component system response regulator - none -
fig|6666666.230104.peg.997 CDS JNHN01000115.1 15775 15957 1 + 183 hypothetical protein - none -
fig|6666666.230104.peg.998 CDS JNHN01000115.1 18619 16052 -1 - 2568 ApeH acylamino-acid-releasing enzyme (EC 3.4.19.1) - none -
fig|6666666.230104.peg.999 CDS JNHN01000115.1 19271 18600 -2 - 672 Similar to tRNA pseudouridine synthase C, group TruC1 RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.230104.peg.1000 CDS JNHN01000115.1 20110 19364 -1 - 747 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.230104.peg.1001 CDS JNHN01000115.1 20726 20142 -2 - 585 Transcriptional regulator, TetR family - none -
fig|6666666.230104.peg.1002 CDS JNHN01000115.1 21138 21263 3 + 126 hypothetical protein - none -
fig|6666666.230104.peg.1003 CDS JNHN01000115.1 22990 21680 -1 - 1311 Anaerobic C4-dicarboxylate transporter - none -
fig|6666666.230104.peg.1004 CDS JNHN01000115.1 23876 23043 -2 - 834 FIG00402879: hypothetical protein - none -
fig|6666666.230104.peg.1005 CDS JNHN01000115.1 24257 23889 -2 - 369 Transcriptional regulator, GntR family - none -
fig|6666666.230104.peg.1006 CDS JNHN01000115.1 25090 24260 -1 - 831 FIG00403434: hypothetical protein - none -
fig|6666666.230104.peg.1007 CDS JNHN01000115.1 25380 25090 -3 - 291 ABC transporter, ATP-binding protein - none -
fig|6666666.230104.peg.1008 CDS JNHN01000118.1 832 44 -1 - 789 hypothetical protein - none -
fig|6666666.230104.peg.1009 CDS JNHN01000118.1 1881 829 -3 - 1053 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1010 CDS JNHN01000118.1 2228 1878 -2 - 351 Mobile element protein - none -
fig|6666666.230104.peg.1011 CDS JNHN01000118.1 2321 2434 2 + 114 hypothetical protein - none -
fig|6666666.230104.peg.1012 CDS JNHN01000118.1 3124 2405 -1 - 720 hypothetical protein - none -
fig|6666666.230104.peg.1013 CDS JNHN01000118.1 3470 3159 -2 - 312 hypothetical protein - none -
fig|6666666.230104.peg.1014 CDS JNHN01000118.1 4834 3644 -1 - 1191 hypothetical protein - none -
fig|6666666.230104.peg.1015 CDS JNHN01000118.1 6215 4845 -2 - 1371 integrase - none -
fig|6666666.230104.peg.1016 CDS JNHN01000118.1 6406 9021 1 + 2616 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.1017 CDS JNHN01000118.1 9045 10847 3 + 1803 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.1018 CDS JNHN01000118.1 10870 12048 1 + 1179 FIG00409457: hypothetical protein - none -
fig|6666666.230104.peg.1019 CDS JNHN01000118.1 12075 12209 3 + 135 hypothetical protein - none -
fig|6666666.230104.peg.1020 CDS JNHN01000118.1 12437 13696 2 + 1260 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) Cellulosome
fig|6666666.230104.peg.1021 CDS JNHN01000118.1 13706 15847 2 + 2142 Alpha-glucosidase SusB (EC 3.2.1.20) Cellulosome
fig|6666666.230104.peg.1022 CDS JNHN01000118.1 16226 17563 2 + 1338 NAD-specific glutamate dehydrogenase (EC 1.4.1.2) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230104.peg.1023 CDS JNHN01000118.1 17582 18865 2 + 1284 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-)
fig|6666666.230104.peg.1024 CDS JNHN01000118.1 20038 19061 -1 - 978 FIG00411761: hypothetical protein - none -
fig|6666666.230104.peg.1025 CDS JNHN01000118.1 20679 20077 -3 - 603 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.230104.peg.1026 CDS JNHN01000118.1 20875 21774 1 + 900 Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230104.peg.1027 CDS JNHN01000118.1 21796 21936 1 + 141 hypothetical protein - none -
fig|6666666.230104.peg.1028 CDS JNHN01000118.1 23239 21908 -1 - 1332 Membrane-associated zinc metalloprotease - none -
fig|6666666.230104.peg.1029 CDS JNHN01000118.1 24497 23352 -2 - 1146 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.230104.peg.1030 CDS JNHN01000118.1 25391 24534 -2 - 858 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.230104.peg.1031 CDS JNHN01000118.1 25924 25388 -1 - 537 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.230104.peg.1032 CDS JNHN01000118.1 27233 25926 -2 - 1308 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.230104.peg.1033 CDS JNHN01000118.1 27952 27332 -1 - 621 FIG00936255: hypothetical protein - none -
fig|6666666.230104.peg.1034 CDS JNHN01000118.1 28766 28074 -2 - 693 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE
fig|6666666.230104.peg.1035 CDS JNHN01000120.1 176 886 2 + 711 hypothetical protein - none -
fig|6666666.230104.peg.1036 CDS JNHN01000120.1 2248 2370 1 + 123 hypothetical protein - none -
fig|6666666.230104.peg.1037 CDS JNHN01000120.1 2576 5275 2 + 2700 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.1038 CDS JNHN01000120.1 5404 6576 1 + 1173 FIG00403577: hypothetical protein - none -
fig|6666666.230104.peg.1039 CDS JNHN01000120.1 7122 6697 -3 - 426 FIG00410367: hypothetical protein - none -
fig|6666666.230104.peg.1040 CDS JNHN01000120.1 7256 7381 2 + 126 hypothetical protein - none -
fig|6666666.230104.peg.1041 CDS JNHN01000120.1 8735 7458 -2 - 1278 Small-conductance mechanosensitive channel - none -
fig|6666666.230104.peg.1042 CDS JNHN01000120.1 9776 8763 -2 - 1014 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230104.peg.1043 CDS JNHN01000120.1 10618 9788 -1 - 831 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230104.peg.1044 CDS JNHN01000120.1 10758 11669 3 + 912 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.230104.peg.1045 CDS JNHN01000120.1 12252 11686 -3 - 567 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230104.peg.1046 CDS JNHN01000120.1 13398 12295 -3 - 1104 putative periplasmic protein kinase ArgK and related GTPases of G3E family G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.230104.peg.1047 CDS JNHN01000120.1 14593 13529 -1 - 1065 FIG00897161: hypothetical protein - none -
fig|6666666.230104.peg.1048 CDS JNHN01000120.1 20602 14735 -1 - 5868 FIG00403134: hypothetical protein - none -
fig|6666666.230104.peg.1049 CDS JNHN01000120.1 22793 21336 -2 - 1458 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.230104.peg.1050 CDS JNHN01000120.1 24150 23164 -3 - 987 putative dolichol-P-glucose synthetase - none -
fig|6666666.230104.peg.1051 CDS JNHN01000120.1 24286 25080 1 + 795 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) ECSIG4-SIG7;
RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.230104.peg.1052 CDS JNHN01000120.1 25107 26453 3 + 1347 Magnesium transporter - none -
fig|6666666.230104.peg.1053 CDS JNHN01000120.1 26571 28424 3 + 1854 FIG00896368: hypothetical protein - none -
fig|6666666.230104.peg.1054 CDS JNHN01000120.1 29687 28509 -2 - 1179 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.230104.peg.1055 CDS JNHN01000120.1 30155 30514 2 + 360 Ribosomal silencing factor RsfA (former Iojap) - none -
fig|6666666.230104.peg.1056 CDS JNHN01000120.1 30524 32536 2 + 2013 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.230104.peg.1057 CDS JNHN01000121.1 119 1078 2 + 960 hypothetical protein - none -
fig|6666666.230104.peg.1058 CDS JNHN01000123.1 2168 2040 -2 - 129 hypothetical protein - none -
fig|6666666.230104.peg.1059 CDS JNHN01000124.1 42 1373 3 + 1332 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.230104.peg.1060 CDS JNHN01000124.1 1652 2044 2 + 393 FIG00405367: hypothetical protein - none -
fig|6666666.230104.peg.1061 CDS JNHN01000124.1 2178 2801 3 + 624 FIG00406942: hypothetical protein - none -
fig|6666666.230104.peg.1062 CDS JNHN01000124.1 4688 3072 -2 - 1617 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230104.peg.1063 CDS JNHN01000124.1 5028 6131 3 + 1104 GTP-binding and nucleic acid-binding protein YchF - none -
fig|6666666.230104.peg.1064 CDS JNHN01000124.1 6209 7021 2 + 813 FIG00403719: hypothetical protein - none -
fig|6666666.230104.peg.1065 CDS JNHN01000124.1 7041 7961 3 + 921 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.230104.peg.1066 CDS JNHN01000124.1 8048 8950 2 + 903 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.230104.peg.1067 CDS JNHN01000124.1 9052 11388 1 + 2337 Alpha-xylosidase (EC 3.2.1.-) Xylose utilization
fig|6666666.230104.peg.1068 CDS JNHN01000124.1 11423 13600 2 + 2178 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.1069 CDS JNHN01000124.1 16339 13712 -1 - 2628 alpha-rhamnosidase - none -
fig|6666666.230104.peg.1070 CDS JNHN01000124.1 18505 16355 -1 - 2151 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230104.peg.1071 CDS JNHN01000124.1 19781 18648 -2 - 1134 putative alpha-1,6-mannanase - none -
fig|6666666.230104.peg.1072 CDS JNHN01000124.1 20944 19796 -1 - 1149 hypothetical protein - none -
fig|6666666.230104.peg.1073 CDS JNHN01000124.1 22588 20978 -1 - 1611 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.1074 CDS JNHN01000124.1 25687 22604 -1 - 3084 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.230104.peg.1075 CDS JNHN01000124.1 27386 25923 -2 - 1464 FIG00937589: hypothetical protein - none -
fig|6666666.230104.peg.1076 CDS JNHN01000124.1 28635 27406 -3 - 1230 putative alpha-1,6-mannanase - none -
fig|6666666.230104.peg.1077 CDS JNHN01000124.1 30927 28861 -3 - 2067 Putative glycosyl hydrolase of unknown function (DUF1680) - none -
fig|6666666.230104.peg.1078 CDS JNHN01000124.1 34704 31075 -3 - 3630 Alpha-mannosidase (EC 3.2.1.24) Mannose Metabolism
fig|6666666.230104.peg.1079 CDS JNHN01000124.1 35036 36985 2 + 1950 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.1080 CDS JNHN01000124.1 37146 41213 3 + 4068 DNA-binding response regulator, AraC family - none -
fig|6666666.230104.peg.1081 CDS JNHN01000127.1 1225 65 -1 - 1161 Alpha-1,4-N-acetylgalactosamine transferase PglH (EC 2.4.1.-) N-linked Glycosylation in Bacteria
fig|6666666.230104.peg.1082 CDS JNHN01000127.1 1571 1434 -2 - 138 hypothetical protein - none -
fig|6666666.230104.peg.1083 CDS JNHN01000127.1 2534 1836 -2 - 699 Protein-tyrosine-phosphatase (EC 3.1.3.48) - none -
fig|6666666.230104.peg.1084 CDS JNHN01000127.1 5014 2594 -1 - 2421 Tyrosine-protein kinase Wzc (EC 2.7.10.2) CBSS-258594.1.peg.3339
fig|6666666.230104.peg.1085 CDS JNHN01000127.1 5820 5029 -3 - 792 Polysaccharide export outer membrane protein - none -
fig|6666666.230104.peg.1086 CDS JNHN01000127.1 6955 5834 -1 - 1122 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230104.peg.1087 CDS JNHN01000127.1 7578 7018 -3 - 561 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230104.peg.1088 CDS JNHN01000127.1 8318 8154 -2 - 165 hypothetical protein - none -
fig|6666666.230104.peg.1089 CDS JNHN01000127.1 9089 8358 -2 - 732 Mobile element protein - none -
fig|6666666.230104.peg.1090 CDS JNHN01000129.1 981 58 -3 - 924 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1091 CDS JNHN01000129.1 2241 1018 -3 - 1224 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1092 CDS JNHN01000129.1 2672 2250 -2 - 423 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1093 CDS JNHN01000129.1 3430 4191 1 + 762 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1094 CDS JNHN01000129.1 4199 4648 2 + 450 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1095 CDS JNHN01000129.1 4654 5304 1 + 651 Conjugative transposon protein TraD Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1096 CDS JNHN01000129.1 5702 6931 2 + 1230 Mobile element protein - none -
fig|6666666.230104.peg.1097 CDS JNHN01000129.1 8033 7023 -2 - 1011 hypothetical protein - none -
fig|6666666.230104.peg.1098 CDS JNHN01000129.1 8701 8976 1 + 276 Conjugative transposon protein TraE Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1099 CDS JNHN01000129.1 8982 9308 3 + 327 Conjugative transposon protein TraF Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1100 CDS JNHN01000129.1 9305 11839 2 + 2535 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1101 CDS JNHN01000129.1 11854 12192 1 + 339 Conjugative transposon protein TraH Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1102 CDS JNHN01000129.1 12189 12818 3 + 630 Conjugative transposon protein TraI Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1103 CDS JNHN01000129.1 12821 13834 2 + 1014 Conjugative transposon protein TraJ Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1104 CDS JNHN01000129.1 13958 14581 2 + 624 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1105 CDS JNHN01000129.1 14578 14877 1 + 300 Conjugative transposon protein TraL Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1106 CDS JNHN01000130.1 5 526 2 + 522 FIG00694335: hypothetical protein - none -
fig|6666666.230104.peg.1107 CDS JNHN01000130.1 592 1347 1 + 756 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.230104.peg.1108 CDS JNHN01000130.1 1449 1907 3 + 459 FIG00898413: hypothetical protein - none -
fig|6666666.230104.peg.1109 CDS JNHN01000130.1 1917 2504 3 + 588 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230104.peg.1110 CDS JNHN01000130.1 4623 2527 -3 - 2097 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230104.peg.1111 CDS JNHN01000130.1 4604 4741 2 + 138 hypothetical protein - none -
fig|6666666.230104.peg.1112 CDS JNHN01000130.1 7812 4708 -3 - 3105 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.1113 CDS JNHN01000130.1 9078 8305 -3 - 774 Prephenate and/or arogenate dehydrogenase (unknown specificity) (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.230104.peg.1114 CDS JNHN01000130.1 10109 9096 -2 - 1014 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54) / Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.230104.peg.1115 CDS JNHN01000130.1 11560 10379 -1 - 1182 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Threonine and Homoserine Biosynthesis
fig|6666666.230104.peg.1116 CDS JNHN01000130.1 12383 11535 -2 - 849 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.230104.peg.1117 CDS JNHN01000130.1 13426 12677 -1 - 750 Probable secreted protein - none -
fig|6666666.230104.peg.1118 CDS JNHN01000130.1 14407 13448 -1 - 960 TPR domain protein, putative component of TonB system Ton and Tol transport systems
fig|6666666.230104.peg.1119 CDS JNHN01000130.1 16467 14521 -3 - 1947 ATP-dependent DNA helicase, RecQ family - none -
fig|6666666.230104.peg.1120 CDS JNHN01000130.1 18357 16642 -3 - 1716 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.230104.peg.1121 CDS JNHN01000130.1 18553 19326 1 + 774 UPF0246 protein YaaA - none -
fig|6666666.230104.peg.1122 CDS JNHN01000130.1 19474 20469 1 + 996 Phosphatidylinositol-specific phospholipase C (EC 4.6.1.13) Listeria Pathogenicity Island LIPI-1 extended
fig|6666666.230104.peg.1123 CDS JNHN01000130.1 20541 21377 3 + 837 Hypothetical sugar kinase, ROK family - none -
fig|6666666.230104.peg.1124 CDS JNHN01000130.1 21551 24733 2 + 3183 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.1125 CDS JNHN01000130.1 24750 26393 3 + 1644 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.230104.peg.1126 CDS JNHN01000130.1 26596 29526 1 + 2931 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230104.peg.1127 CDS JNHN01000130.1 29638 30408 1 + 771 endonuclease/exonuclease/phosphatase family protein - none -
fig|6666666.230104.peg.1128 CDS JNHN01000130.1 30422 31564 2 + 1143 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.230104.peg.1129 CDS JNHN01000130.1 31586 33190 2 + 1605 Trehalase (EC 3.2.1.28) Trehalose Uptake and Utilization
fig|6666666.230104.peg.1130 CDS JNHN01000130.1 33205 34656 1 + 1452 FIG00408452: hypothetical protein - none -
fig|6666666.230104.peg.1131 CDS JNHN01000130.1 34770 36974 3 + 2205 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230104.peg.1132 CDS JNHN01000130.1 36987 38435 3 + 1449 Putative phosphohydrolase, Icc family - none -
fig|6666666.230104.peg.1133 CDS JNHN01000130.1 39609 38437 -3 - 1173 Xylose operon regulatory protein - none -
fig|6666666.230104.peg.1134 CDS JNHN01000130.1 40111 39677 -1 - 435 4-hydroxybenzoyl-CoA thioesterase (EC 3.1.2.23) - none -
fig|6666666.230104.peg.1135 CDS JNHN01000130.1 40162 40755 1 + 594 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.230104.peg.1136 CDS JNHN01000130.1 40764 42554 3 + 1791 Chloride channel protein - none -
fig|6666666.230104.peg.1137 CDS JNHN01000130.1 42703 42584 -1 - 120 hypothetical protein - none -
fig|6666666.230104.peg.1138 CDS JNHN01000130.1 42728 43699 2 + 972 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.230104.peg.1139 CDS JNHN01000130.1 43965 44615 3 + 651 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.230104.peg.1140 CDS JNHN01000130.1 44719 46710 1 + 1992 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.230104.peg.1141 CDS JNHN01000130.1 46797 47834 3 + 1038 FIG146085: 3-to-5 oligoribonuclease A, Bacillus type - none -
fig|6666666.230104.peg.1142 CDS JNHN01000130.1 47938 48549 1 + 612 FIG00409304: hypothetical protein - none -
fig|6666666.230104.peg.1143 CDS JNHN01000130.1 48575 49963 2 + 1389 Phosphomannomutase (EC 5.4.2.8) / Phosphoglucosamine mutase (EC 5.4.2.10) Bacterial checkpoint-control-related cluster;
Mannose Metabolism;
Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.230104.peg.1144 CDS JNHN01000130.1 50063 51418 2 + 1356 Sodium:alanine symporter - none -
fig|6666666.230104.peg.1145 CDS JNHN01000130.1 51938 51435 -2 - 504 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions
fig|6666666.230104.peg.1146 CDS JNHN01000130.1 53173 51944 -1 - 1230 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230104.peg.1147 CDS JNHN01000130.1 53301 54431 3 + 1131 putative DNA mismatch repair protein - none -
fig|6666666.230104.peg.1148 CDS JNHN01000130.1 54776 56698 2 + 1923 Sensor histidine kinase - none -
fig|6666666.230104.peg.1149 CDS JNHN01000130.1 56832 56695 -3 - 138 hypothetical protein - none -
fig|6666666.230104.peg.1150 CDS JNHN01000130.1 56831 57583 2 + 753 Two-component system response regulator - none -
fig|6666666.230104.peg.1151 CDS JNHN01000130.1 58075 57722 -1 - 354 FIG00402715: hypothetical protein - none -
fig|6666666.230104.peg.1152 CDS JNHN01000130.1 59496 58366 -3 - 1131 FIG00402773: hypothetical protein - none -
fig|6666666.230104.peg.1153 CDS JNHN01000130.1 62211 59524 -3 - 2688 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.1154 CDS JNHN01000130.1 62783 62265 -2 - 519 FIG00418205: hypothetical protein - none -
fig|6666666.230104.peg.1155 CDS JNHN01000130.1 63615 63070 -3 - 546 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.1156 CDS JNHN01000130.1 64226 63636 -2 - 591 Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent Heat shock dnaK gene cluster extended
fig|6666666.230104.peg.1157 CDS JNHN01000132.1 199 315 1 + 117 FIG00410152: hypothetical protein - none -
fig|6666666.230104.peg.1158 CDS JNHN01000132.1 515 381 -2 - 135 hypothetical protein - none -
fig|6666666.230104.peg.1159 CDS JNHN01000132.1 450 1367 3 + 918 Glycosyl transferase, family 2 - none -
fig|6666666.230104.peg.1160 CDS JNHN01000132.1 1654 1391 -1 - 264 Conserved protein, with a weak D-galactarate dehydratase/altronate hydrolase domain - none -
fig|6666666.230104.peg.1161 CDS JNHN01000132.1 1824 1651 -3 - 174 hypothetical protein - none -
fig|6666666.230104.peg.1162 CDS JNHN01000132.1 2030 1818 -2 - 213 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230104.peg.1163 CDS JNHN01000133.1 2032 1034 -1 - 999 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.230104.peg.1164 CDS JNHN01000136.1 56 307 2 + 252 FIG00413440: hypothetical protein - none -
fig|6666666.230104.peg.1165 CDS JNHN01000137.1 1533 1405 -3 - 129 hypothetical protein - none -
fig|6666666.230104.peg.1166 CDS JNHN01000138.1 663 4 -3 - 660 Lipoprotein releasing system ATP-binding protein LolD Lipoprotein sorting system
fig|6666666.230104.peg.1167 CDS JNHN01000138.1 1447 728 -1 - 720 Molybdopterin biosynthesis protein MoeB - none -
fig|6666666.230104.peg.1168 CDS JNHN01000139.1 141 269 3 + 129 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230104.peg.1169 CDS JNHN01000139.1 315 1511 3 + 1197 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230104.peg.1170 CDS JNHN01000139.1 1516 3840 1 + 2325 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.1171 CDS JNHN01000139.1 5611 4247 -1 - 1365 hypothetical protein - none -
fig|6666666.230104.peg.1172 CDS JNHN01000140.1 124 708 1 + 585 Glycosyl transferase, group 1 family protein - none -
fig|6666666.230104.peg.1173 CDS JNHN01000140.1 715 1599 1 + 885 GumL protein - none -
fig|6666666.230104.peg.1174 CDS JNHN01000141.1 134 985 2 + 852 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.230104.peg.1175 CDS JNHN01000141.1 3174 1144 -3 - 2031 putative patatin-like phospholipase - none -
fig|6666666.230104.peg.1176 CDS JNHN01000141.1 4843 3320 -1 - 1524 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230104.peg.1177 CDS JNHN01000141.1 6060 4861 -3 - 1200 Glucuronyl hydrolase - none -
fig|6666666.230104.peg.1178 CDS JNHN01000141.1 6239 6682 2 + 444 Phenylacetic acid degradation protein PaaD, thioesterase - none -
fig|6666666.230104.peg.1179 CDS JNHN01000141.1 6735 7331 3 + 597 hypothetical protein - none -
fig|6666666.230104.peg.1180 CDS JNHN01000141.1 9411 7456 -3 - 1956 FIG00899092: hypothetical protein - none -
fig|6666666.230104.peg.1181 CDS JNHN01000141.1 9720 10895 3 + 1176 Membrane fusion protein of RND family multidrug efflux pump Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.1182 CDS JNHN01000141.1 10950 14369 3 + 3420 RND efflux system, inner membrane transporter CmeB Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.1183 CDS JNHN01000141.1 14389 15774 1 + 1386 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.1184 CDS JNHN01000141.1 15874 16641 1 + 768 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) Llipid A biosynthesis cluster
fig|6666666.230104.peg.1185 CDS JNHN01000141.1 17918 17205 -2 - 714 FIG00406137: hypothetical protein - none -
fig|6666666.230104.peg.1186 CDS JNHN01000141.1 19012 17930 -1 - 1083 MdsC protein - none -
fig|6666666.230104.peg.1187 CDS JNHN01000141.1 19244 23275 2 + 4032 FIG00939280: hypothetical protein - none -
fig|6666666.230104.peg.1188 CDS JNHN01000141.1 23413 23285 -1 - 129 hypothetical protein - none -
fig|6666666.230104.peg.1189 CDS JNHN01000141.1 23405 24964 2 + 1560 Arylsulfatase (EC 3.1.6.1) Galactosylceramide and Sulfatide metabolism
fig|6666666.230104.peg.1190 CDS JNHN01000141.1 25135 28299 1 + 3165 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.1191 CDS JNHN01000141.1 28324 30078 1 + 1755 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.1192 CDS JNHN01000141.1 30127 31134 1 + 1008 FIG00939134: hypothetical protein - none -
fig|6666666.230104.peg.1193 CDS JNHN01000142.1 12 809 3 + 798 Mobile element protein - none -
fig|6666666.230104.peg.1194 CDS JNHN01000142.1 1056 1556 3 + 501 putative non-specific DNA-binding protein - none -
fig|6666666.230104.peg.1195 CDS JNHN01000142.1 1838 4300 2 + 2463 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.230104.peg.1196 CDS JNHN01000142.1 4400 5083 2 + 684 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.230104.peg.1197 CDS JNHN01000142.1 5083 5328 1 + 246 FIG00409633: hypothetical protein - none -
fig|6666666.230104.peg.1198 CDS JNHN01000142.1 5455 6720 1 + 1266 Manganese transport protein MntH - none -
fig|6666666.230104.peg.1199 CDS JNHN01000142.1 6753 7517 3 + 765 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.230104.peg.1200 CDS JNHN01000142.1 7514 7984 2 + 471 FIG00406685: hypothetical protein - none -
fig|6666666.230104.peg.1201 CDS JNHN01000142.1 8135 8335 2 + 201 FIG00404895: hypothetical protein - none -
fig|6666666.230104.peg.1202 CDS JNHN01000143.1 2 466 2 + 465 3-oxo-5-alpha-steroid 4-dehydrogenase - none -
fig|6666666.230104.peg.1203 CDS JNHN01000143.1 539 1762 2 + 1224 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - none -
fig|6666666.230104.peg.1204 CDS JNHN01000144.1 23 640 2 + 618 UDP-glucose 4-epimerase (EC 5.1.3.2) CBSS-296591.1.peg.2330;
Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.230104.peg.1205 CDS JNHN01000144.1 708 1973 3 + 1266 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.230104.peg.1206 CDS JNHN01000145.1 744 25 -3 - 720 Molybdopterin biosynthesis protein MoeB - none -
fig|6666666.230104.peg.1207 CDS JNHN01000145.1 2041 794 -1 - 1248 Na+/H+ antiporter - none -
fig|6666666.230104.peg.1208 CDS JNHN01000146.1 398 1075 2 + 678 hypothetical protein - none -
fig|6666666.230104.peg.1209 CDS JNHN01000146.1 1204 1055 -1 - 150 hypothetical protein - none -
fig|6666666.230104.peg.1210 CDS JNHN01000147.1 8 2581 2 + 2574 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.1211 CDS JNHN01000147.1 2587 4668 1 + 2082 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.1212 CDS JNHN01000147.1 4691 7798 2 + 3108 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.1213 CDS JNHN01000147.1 7856 9472 2 + 1617 Alpha-L-fucosidase (EC 3.2.1.51) - none -
fig|6666666.230104.peg.1214 CDS JNHN01000147.1 9487 11877 1 + 2391 Alpha-xylosidase (EC 3.2.1.-) Xylose utilization
fig|6666666.230104.peg.1215 CDS JNHN01000147.1 11927 14767 2 + 2841 Sialic acid-specific 9-O-acetylesterase - none -
fig|6666666.230104.peg.1216 CDS JNHN01000147.1 14926 15051 1 + 126 hypothetical protein - none -
fig|6666666.230104.peg.1217 CDS JNHN01000147.1 15189 17870 3 + 2682 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.230104.peg.1218 CDS JNHN01000147.1 17932 18786 1 + 855 FIG00415187: hypothetical protein - none -
fig|6666666.230104.peg.1219 CDS JNHN01000147.1 18798 19847 3 + 1050 Carboxyl-terminal protease-related protein - none -
fig|6666666.230104.peg.1220 CDS JNHN01000147.1 20174 23038 2 + 2865 FIG00402975: hypothetical protein - none -
fig|6666666.230104.peg.1221 CDS JNHN01000147.1 23247 26240 3 + 2994 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.1222 CDS JNHN01000147.1 26259 27809 3 + 1551 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.1223 CDS JNHN01000147.1 27822 29921 3 + 2100 Arabinan endo-1,5-alpha-L-arabinosidase A - none -
fig|6666666.230104.peg.1224 CDS JNHN01000147.1 29954 31330 2 + 1377 FIG01018870: hypothetical protein - none -
fig|6666666.230104.peg.1225 CDS JNHN01000147.1 31450 33741 1 + 2292 Periplasmic beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.1226 CDS JNHN01000147.1 33879 36914 3 + 3036 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.1227 CDS JNHN01000147.1 36995 38515 2 + 1521 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.1228 CDS JNHN01000147.1 38765 38565 -2 - 201 hypothetical protein - none -
fig|6666666.230104.peg.1229 CDS JNHN01000147.1 38831 41167 2 + 2337 Periplasmic beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.1230 CDS JNHN01000147.1 41207 42070 2 + 864 endonuclease/exonuclease/phosphatase family protein - none -
fig|6666666.230104.peg.1231 CDS JNHN01000147.1 42085 43449 1 + 1365 Periplasmic beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.1232 CDS JNHN01000147.1 46068 43537 -3 - 2532 putative TonB-dependent receptor - none -
fig|6666666.230104.peg.1233 CDS JNHN01000147.1 47514 46219 -3 - 1296 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230104.peg.1234 CDS JNHN01000147.1 47899 47549 -1 - 351 FIG00937621: hypothetical protein - none -
fig|6666666.230104.peg.1235 CDS JNHN01000147.1 48170 48036 -2 - 135 hypothetical protein - none -
fig|6666666.230104.peg.1236 CDS JNHN01000147.1 49366 48251 -1 - 1116 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.230104.peg.1237 CDS JNHN01000147.1 50107 49481 -1 - 627 FIG00407210: hypothetical protein - none -
fig|6666666.230104.peg.1238 CDS JNHN01000147.1 51630 50230 -3 - 1401 FIG00897321: hypothetical protein - none -
fig|6666666.230104.peg.1239 CDS JNHN01000147.1 52391 51636 -2 - 756 N-acetylglucosamine related transporter, NagX - none -
fig|6666666.230104.peg.1240 CDS JNHN01000148.1 29 1042 2 + 1014 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP)
fig|6666666.230104.peg.1241 CDS JNHN01000148.1 1054 1935 1 + 882 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.230104.peg.1242 CDS JNHN01000149.1 2036 555 -2 - 1482 Periplasmic beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.1243 CDS JNHN01000150.1 2290 749 -1 - 1542 hypothetical protein-signal peptide and transmembrane prediction - none -
fig|6666666.230104.peg.1244 CDS JNHN01000150.1 3859 2312 -1 - 1548 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.1245 CDS JNHN01000150.1 6936 3880 -3 - 3057 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.1246 CDS JNHN01000150.1 8028 7012 -3 - 1017 L-rhamnose-proton symporter - none -
fig|6666666.230104.peg.1247 CDS JNHN01000150.1 9471 8065 -3 - 1407 Unknown pentose isomerase TM0951 - none -
fig|6666666.230104.peg.1248 CDS JNHN01000150.1 11006 9528 -2 - 1479 Unknown pentose kinase TM0952 - none -
fig|6666666.230104.peg.1249 CDS JNHN01000150.1 11959 11036 -1 - 924 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.230104.peg.1250 CDS JNHN01000150.1 12794 11961 -2 - 834 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.230104.peg.1251 CDS JNHN01000150.1 13050 13664 3 + 615 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.230104.peg.1252 CDS JNHN01000150.1 13682 14443 2 + 762 Unknown pentose utilization regulator, DeoR family - none -
fig|6666666.230104.peg.1253 CDS JNHN01000150.1 16147 14690 -1 - 1458 MutS-related protein, family 1 DNA repair, bacterial MutL-MutS system
fig|6666666.230104.peg.1254 CDS JNHN01000150.1 16233 16358 3 + 126 hypothetical protein - none -
fig|6666666.230104.peg.1255 CDS JNHN01000150.1 16355 17455 2 + 1101 Endo-1,4-beta-xylanase D - none -
fig|6666666.230104.peg.1256 CDS JNHN01000150.1 19534 17537 -1 - 1998 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.1257 CDS JNHN01000150.1 19809 23789 3 + 3981 DNA-binding response regulator, AraC family - none -
fig|6666666.230104.peg.1258 CDS JNHN01000150.1 23917 27093 1 + 3177 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.1259 CDS JNHN01000150.1 27130 28752 1 + 1623 FIG00415907: hypothetical protein - none -
fig|6666666.230104.peg.1260 CDS JNHN01000150.1 28793 30250 2 + 1458 FIG00412418: hypothetical protein - none -
fig|6666666.230104.peg.1261 CDS JNHN01000150.1 30378 31487 3 + 1110 endo-beta-1,4-glucanase (celulase B) - none -
fig|6666666.230104.peg.1262 CDS JNHN01000150.1 31487 31837 2 + 351 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.1263 CDS JNHN01000150.1 31834 35559 1 + 3726 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.1264 CDS JNHN01000150.1 35565 37646 3 + 2082 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.1265 CDS JNHN01000152.1 618 1487 3 + 870 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.230104.peg.1266 CDS JNHN01000152.1 1987 1556 -1 - 432 FIG00413844: hypothetical protein - none -
fig|6666666.230104.peg.1267 CDS JNHN01000153.1 2658 562 -3 - 2097 FIG00415226: hypothetical protein - none -
fig|6666666.230104.peg.1268 CDS JNHN01000153.1 4087 2681 -1 - 1407 FIG00413844: hypothetical protein - none -
fig|6666666.230104.peg.1269 CDS JNHN01000153.1 6380 4620 -2 - 1761 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.1270 CDS JNHN01000153.1 8424 6442 -3 - 1983 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.1271 CDS JNHN01000153.1 9660 8455 -3 - 1206 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.1272 CDS JNHN01000153.1 10942 9761 -1 - 1182 FIG00411978: hypothetical protein - none -
fig|6666666.230104.peg.1273 CDS JNHN01000153.1 11918 10971 -2 - 948 Ribulokinase (EC 2.7.1.16) L-Arabinose utilization
fig|6666666.230104.peg.1274 CDS JNHN01000153.1 12294 12178 -3 - 117 hypothetical protein - none -
fig|6666666.230104.peg.1275 CDS JNHN01000153.1 13378 12509 -1 - 870 hypothetical protein - none -
fig|6666666.230104.peg.1276 CDS JNHN01000154.1 34 279 1 + 246 Oar protein - none -
fig|6666666.230104.peg.1277 CDS JNHN01000154.1 1464 379 -3 - 1086 FIG00415799: hypothetical protein - none -
fig|6666666.230104.peg.1278 CDS JNHN01000154.1 1920 1474 -3 - 447 glycerate dehydrogenase - none -
fig|6666666.230104.peg.1279 CDS JNHN01000156.1 6683 2730 -2 - 3954 DNA-binding response regulator, AraC family - none -
fig|6666666.230104.peg.1280 CDS JNHN01000156.1 8606 6789 -2 - 1818 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.1281 CDS JNHN01000156.1 8875 8732 -1 - 144 hypothetical protein - none -
fig|6666666.230104.peg.1282 CDS JNHN01000156.1 10428 8938 -3 - 1491 FIG00408294: hypothetical protein - none -
fig|6666666.230104.peg.1283 CDS JNHN01000156.1 13591 10448 -1 - 3144 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.1284 CDS JNHN01000156.1 13905 15779 3 + 1875 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.230104.peg.1285 CDS JNHN01000156.1 15836 16360 2 + 525 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.230104.peg.1286 CDS JNHN01000156.1 16483 18303 1 + 1821 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.230104.peg.1287 CDS JNHN01000156.1 18384 18836 3 + 453 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.230104.peg.1288 CDS JNHN01000156.1 18836 19174 2 + 339 FIG00649439: hypothetical protein - none -
fig|6666666.230104.peg.1289 CDS JNHN01000156.1 19161 20063 3 + 903 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.230104.peg.1290 CDS JNHN01000156.1 21123 20149 -3 - 975 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.230104.peg.1291 CDS JNHN01000156.1 22197 21301 -3 - 897 hypothetical protein - none -
fig|6666666.230104.peg.1292 CDS JNHN01000156.1 23481 22702 -3 - 780 hypothetical protein - none -
fig|6666666.230104.peg.1293 CDS JNHN01000157.1 34 936 1 + 903 hypothetical protein - none -
fig|6666666.230104.peg.1294 CDS JNHN01000157.1 905 1858 2 + 954 hypothetical protein - none -
fig|6666666.230104.peg.1295 CDS JNHN01000159.1 13 792 1 + 780 FIG00899092: hypothetical protein - none -
fig|6666666.230104.peg.1296 CDS JNHN01000159.1 1513 917 -1 - 597 hypothetical protein - none -
fig|6666666.230104.peg.1297 CDS JNHN01000159.1 2009 1566 -2 - 444 Phenylacetic acid degradation protein PaaD, thioesterase - none -
fig|6666666.230104.peg.1298 CDS JNHN01000159.1 2188 3387 1 + 1200 Glucuronyl hydrolase - none -
fig|6666666.230104.peg.1299 CDS JNHN01000159.1 3405 4928 3 + 1524 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230104.peg.1300 CDS JNHN01000159.1 5074 7104 1 + 2031 putative patatin-like phospholipase - none -
fig|6666666.230104.peg.1301 CDS JNHN01000159.1 8738 7263 -2 - 1476 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.230104.peg.1302 CDS JNHN01000159.1 8825 9916 2 + 1092 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.230104.peg.1303 CDS JNHN01000159.1 10016 10897 2 + 882 FIG00897142: hypothetical protein - none -
fig|6666666.230104.peg.1304 CDS JNHN01000159.1 12554 11043 -2 - 1512 putative auxin-regulated protein - none -
fig|6666666.230104.peg.1305 CDS JNHN01000159.1 12770 13687 2 + 918 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.230104.peg.1306 CDS JNHN01000159.1 14491 13646 -1 - 846 Ribonuclease III (EC 3.1.26.3) RNA processing and degradation, bacterial
fig|6666666.230104.peg.1307 CDS JNHN01000159.1 15797 14532 -2 - 1266 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) - none -
fig|6666666.230104.peg.1308 CDS JNHN01000159.1 16055 15819 -2 - 237 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230104.peg.1309 CDS JNHN01000159.1 16205 16792 2 + 588 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) De Novo Purine Biosynthesis
fig|6666666.230104.peg.1310 CDS JNHN01000159.1 18636 16783 -3 - 1854 FIG00416859: hypothetical protein - none -
fig|6666666.230104.peg.1311 CDS JNHN01000159.1 19796 18753 -2 - 1044 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230104.peg.1312 CDS JNHN01000159.1 20067 19843 -3 - 225 Oar protein - none -
fig|6666666.230104.peg.1313 CDS JNHN01000159.1 20182 20340 1 + 159 hypothetical protein - none -
fig|6666666.230104.peg.1314 CDS JNHN01000159.1 20426 21571 2 + 1146 mannosyltransferase - none -
fig|6666666.230104.peg.1315 CDS JNHN01000159.1 21575 22612 2 + 1038 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.230104.peg.1316 CDS JNHN01000159.1 22609 23340 1 + 732 Choline permease LicB - none -
fig|6666666.230104.peg.1317 CDS JNHN01000159.1 23358 24185 3 + 828 Lipopolysaccharide cholinephosphotransferase LicD1 (EC 2.7.8.-) - none -
fig|6666666.230104.peg.1318 CDS JNHN01000159.1 25124 24207 -2 - 918 PUTATIVE SIGNAL PEPTIDE PROTEIN - none -
fig|6666666.230104.peg.1319 CDS JNHN01000159.1 25433 26431 2 + 999 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.230104.peg.1320 CDS JNHN01000159.1 27842 26412 -2 - 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.230104.peg.1321 CDS JNHN01000159.1 28327 27839 -1 - 489 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.230104.peg.1322 CDS JNHN01000159.1 28901 28320 -2 - 582 Phosphoheptose isomerase 1 (EC 5.3.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.230104.peg.1323 CDS JNHN01000159.1 29687 28938 -2 - 750 FIG00414762: hypothetical protein - none -
fig|6666666.230104.peg.1324 CDS JNHN01000159.1 31522 29771 -1 - 1752 Phosphoglycerol transferase MdoB related protein, alkaline phosphatase superfamily - none -
fig|6666666.230104.peg.1325 CDS JNHN01000159.1 31547 31675 2 + 129 hypothetical protein - none -
fig|6666666.230104.peg.1326 CDS JNHN01000159.1 32002 31862 -1 - 141 hypothetical protein - none -
fig|6666666.230104.peg.1327 CDS JNHN01000159.1 32018 32911 2 + 894 CDP-glycerol: N-acetyl-beta-D-mannosaminyl-1,4-N-acetyl-D-glucosaminyldiphosphoundecaprenyl glycerophosphotransferase Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230104.peg.1328 CDS JNHN01000159.1 32924 33934 2 + 1011 Glycosyl transferase, family 2 - none -
fig|6666666.230104.peg.1329 CDS JNHN01000159.1 34026 35030 3 + 1005 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230104.peg.1330 CDS JNHN01000159.1 35027 35332 2 + 306 Putative N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase Teichuronic acid biosynthesis
fig|6666666.230104.peg.1331 CDS JNHN01000159.1 35387 35971 2 + 585 Putative N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase Teichuronic acid biosynthesis
fig|6666666.230104.peg.1332 CDS JNHN01000159.1 35971 37254 1 + 1284 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230104.peg.1333 CDS JNHN01000159.1 37267 38142 1 + 876 Streptomycin biosynthesis StrF domain protein - none -
fig|6666666.230104.peg.1334 CDS JNHN01000159.1 38265 39293 3 + 1029 Glycosyl transferase, group 1 CBSS-258594.1.peg.3339
fig|6666666.230104.peg.1335 CDS JNHN01000159.1 39399 40283 3 + 885 Beta-1,3-glucosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.230104.peg.1336 CDS JNHN01000159.1 40288 41199 1 + 912 FIG00416846: hypothetical protein - none -
fig|6666666.230104.peg.1337 CDS JNHN01000159.1 41953 41330 -1 - 624 FIG00408365: hypothetical protein - none -
fig|6666666.230104.peg.1338 CDS JNHN01000159.1 43746 42073 -3 - 1674 FIG00414179: hypothetical protein - none -
fig|6666666.230104.peg.1339 CDS JNHN01000159.1 44124 45962 3 + 1839 ABC transporter, ATP-binding protein - none -
fig|6666666.230104.peg.1340 CDS JNHN01000159.1 46386 47465 3 + 1080 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) - none -
fig|6666666.230104.peg.1341 CDS JNHN01000159.1 47532 49019 3 + 1488 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) - none -
fig|6666666.230104.peg.1342 CDS JNHN01000159.1 49091 49966 2 + 876 Probable secreted glycosyl hydrolase - none -
fig|6666666.230104.peg.1343 CDS JNHN01000159.1 50004 50891 3 + 888 Sugar phosphate isomerase/epimerase - none -
fig|6666666.230104.peg.1344 CDS JNHN01000159.1 51021 50905 -3 - 117 hypothetical protein - none -
fig|6666666.230104.peg.1345 CDS JNHN01000159.1 51332 50985 -2 - 348 Ribonuclease HI-related protein 3 Ribonuclease H
fig|6666666.230104.peg.1346 CDS JNHN01000160.1 150 3443 3 + 3294 putative cell surface protein - none -
fig|6666666.230104.peg.1347 CDS JNHN01000160.1 3534 3875 3 + 342 hypothetical protein - none -
fig|6666666.230104.peg.1348 CDS JNHN01000160.1 4040 5167 2 + 1128 hypothetical protein - none -
fig|6666666.230104.peg.1349 CDS JNHN01000160.1 5941 6111 1 + 171 hypothetical protein - none -
fig|6666666.230104.peg.1350 CDS JNHN01000160.1 6274 7977 1 + 1704 Mobile element protein - none -
fig|6666666.230104.peg.1351 CDS JNHN01000160.1 9030 9983 3 + 954 Mobile element protein - none -
fig|6666666.230104.peg.1352 CDS JNHN01000160.1 10441 13572 1 + 3132 putative cell surface protein - none -
fig|6666666.230104.peg.1353 CDS JNHN01000160.1 13602 13997 3 + 396 hypothetical protein - none -
fig|6666666.230104.peg.1354 CDS JNHN01000160.1 14455 14679 1 + 225 transcriptional regulator, XRE family - none -
fig|6666666.230104.peg.1355 CDS JNHN01000160.1 14676 15005 3 + 330 FIG00406133: hypothetical protein - none -
fig|6666666.230104.peg.1356 CDS JNHN01000160.1 15009 15950 3 + 942 HipA protein Persister Cells
fig|6666666.230104.peg.1357 CDS JNHN01000160.1 17085 15982 -3 - 1104 hypothetical protein - none -
fig|6666666.230104.peg.1358 CDS JNHN01000160.1 17247 18200 3 + 954 Mobile element protein - none -
fig|6666666.230104.peg.1359 CDS JNHN01000160.1 18678 21902 3 + 3225 hypothetical protein - none -
fig|6666666.230104.peg.1360 CDS JNHN01000160.1 22014 22574 3 + 561 hypothetical protein - none -
fig|6666666.230104.peg.1361 CDS JNHN01000160.1 23214 22648 -3 - 567 FIG00937641: hypothetical protein - none -
fig|6666666.230104.peg.1362 CDS JNHN01000160.1 23370 23867 3 + 498 FIG01201438: hypothetical protein - none -
fig|6666666.230104.peg.1363 CDS JNHN01000160.1 24148 24876 1 + 729 Nitric oxide-dependent regulator DnrN or NorA Iron-sulfur cluster assembly;
Nitrosative stress
fig|6666666.230104.peg.1364 CDS JNHN01000160.1 24873 25232 3 + 360 probable uroporphyrin-III c-methyltransferase (EC 2.1.1.107) - none -
fig|6666666.230104.peg.1365 CDS JNHN01000160.1 27738 25303 -3 - 2436 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.230104.peg.1366 CDS JNHN01000160.1 28093 27872 -1 - 222 FIG00935798: hypothetical protein - none -
fig|6666666.230104.peg.1367 CDS JNHN01000160.1 28718 28164 -2 - 555 ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17) - none -
fig|6666666.230104.peg.1368 CDS JNHN01000160.1 29455 28823 -1 - 633 FIG00412153: hypothetical protein - none -
fig|6666666.230104.peg.1369 CDS JNHN01000160.1 30956 29460 -2 - 1497 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.230104.peg.1370 CDS JNHN01000160.1 33515 31053 -2 - 2463 putative large secreted protein - none -
fig|6666666.230104.peg.1371 CDS JNHN01000160.1 35903 33690 -2 - 2214 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.1372 CDS JNHN01000160.1 38533 35951 -1 - 2583 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.1373 CDS JNHN01000160.1 41557 38675 -1 - 2883 Alpha-xylosidase (EC 3.2.1.-) Xylose utilization
fig|6666666.230104.peg.1374 CDS JNHN01000160.1 45775 41696 -1 - 4080 FIG00408146: hypothetical protein - none -
fig|6666666.230104.peg.1375 CDS JNHN01000160.1 47776 45995 -1 - 1782 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230104.peg.1376 CDS JNHN01000160.1 47797 47937 1 + 141 hypothetical protein - none -
fig|6666666.230104.peg.1377 CDS JNHN01000160.1 48041 49597 2 + 1557 Beta-xylosidase (EC 3.2.1.37) Xylose utilization
fig|6666666.230104.peg.1378 CDS JNHN01000160.1 52613 49992 -2 - 2622 FIG01287877: hypothetical protein - none -
fig|6666666.230104.peg.1379 CDS JNHN01000160.1 54592 52622 -1 - 1971 FIG00412438: hypothetical protein - none -
fig|6666666.230104.peg.1380 CDS JNHN01000160.1 56313 54634 -3 - 1680 SusD, outer membrane protein Cellulosome
fig|6666666.230104.peg.1381 CDS JNHN01000160.1 59521 56327 -1 - 3195 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.1382 CDS JNHN01000160.1 59869 60828 1 + 960 FIG00414698: hypothetical protein - none -
fig|6666666.230104.peg.1383 CDS JNHN01000160.1 62038 60839 -1 - 1200 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.1384 CDS JNHN01000160.1 62045 62182 2 + 138 hypothetical protein - none -
fig|6666666.230104.peg.1385 CDS JNHN01000160.1 63266 62457 -2 - 810 FIG00416635: hypothetical protein - none -
fig|6666666.230104.peg.1386 CDS JNHN01000160.1 63582 64667 3 + 1086 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) Mannose Metabolism
fig|6666666.230104.peg.1387 CDS JNHN01000160.1 65160 64768 -3 - 393 HIT family protein - none -
fig|6666666.230104.peg.1388 CDS JNHN01000160.1 65674 65210 -1 - 465 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.230104.peg.1389 CDS JNHN01000160.1 67016 65865 -2 - 1152 FIG00897677: hypothetical protein - none -
fig|6666666.230104.peg.1390 CDS JNHN01000160.1 67224 69368 3 + 2145 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-1806.1.peg.3045;
CBSS-350688.3.peg.1509
fig|6666666.230104.peg.1391 CDS JNHN01000160.1 69568 70113 1 + 546 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.1392 CDS JNHN01000160.1 70210 71145 1 + 936 putative anti-sigma factor - none -
fig|6666666.230104.peg.1393 CDS JNHN01000160.1 71448 71323 -3 - 126 hypothetical protein - none -
fig|6666666.230104.peg.1394 CDS JNHN01000160.1 71548 74658 1 + 3111 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.1395 CDS JNHN01000160.1 74671 76272 1 + 1602 FIG00897230: hypothetical protein - none -
fig|6666666.230104.peg.1396 CDS JNHN01000160.1 78473 76269 -2 - 2205 Pyrophosphate-energized proton pump (EC 3.6.1.1) Phosphate metabolism
fig|6666666.230104.peg.1397 CDS JNHN01000160.1 78717 80621 3 + 1905 hypothetical protein - none -
fig|6666666.230104.peg.1398 CDS JNHN01000160.1 81035 80715 -2 - 321 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.230104.peg.1399 CDS JNHN01000160.1 82371 81106 -3 - 1266 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.230104.peg.1400 CDS JNHN01000160.1 83737 82394 -1 - 1344 Iron-sulfur cluster assembly protein SufD Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.230104.peg.1401 CDS JNHN01000160.1 84510 83755 -3 - 756 Iron-sulfur cluster assembly ATPase protein SufC Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.230104.peg.1402 CDS JNHN01000160.1 86009 84555 -2 - 1455 Iron-sulfur cluster assembly protein SufB Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.230104.peg.1403 CDS JNHN01000160.1 86570 86058 -2 - 513 Colicin V production protein Colicin V and Bacteriocin Production Cluster
fig|6666666.230104.peg.1404 CDS JNHN01000160.1 89771 86724 -2 - 3048 Translation initiation factor 2 CBSS-138119.3.peg.2719;
CBSS-350688.3.peg.1509;
Inteins;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.230104.peg.1405 CDS JNHN01000160.1 91160 89895 -2 - 1266 Transcription termination protein NusA CBSS-350688.3.peg.1509;
NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.230104.peg.1406 CDS JNHN01000160.1 91632 91165 -3 - 468 FIG000325: clustered with transcription termination protein NusA CBSS-350688.3.peg.1509;
NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.230104.peg.1407 CDS JNHN01000160.1 94592 92103 -2 - 2490 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.1408 CDS JNHN01000160.1 97053 94729 -3 - 2325 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.1409 CDS JNHN01000160.1 98254 97058 -1 - 1197 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230104.peg.1410 CDS JNHN01000160.1 99478 98300 -1 - 1179 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230104.peg.1411 CDS JNHN01000160.1 100421 99537 -2 - 885 Endo-1,4-beta-xylanase Z - none -
fig|6666666.230104.peg.1412 CDS JNHN01000160.1 102875 100509 -2 - 2367 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.1413 CDS JNHN01000160.1 104600 103029 -2 - 1572 FIG00411172: hypothetical protein - none -
fig|6666666.230104.peg.1414 CDS JNHN01000160.1 107717 104631 -2 - 3087 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.1415 CDS JNHN01000160.1 109467 107812 -3 - 1656 Carboxylesterase type B - none -
fig|6666666.230104.peg.1416 CDS JNHN01000160.1 109754 113779 2 + 4026 DNA-binding response regulator, AraC family - none -
fig|6666666.230104.peg.1417 CDS JNHN01000160.1 113842 114240 1 + 399 FIG00402719: hypothetical protein - none -
fig|6666666.230104.peg.1418 CDS JNHN01000160.1 115265 114555 -2 - 711 Putative predicted metal-dependent hydrolase Restriction-Modification System
fig|6666666.230104.peg.1419 CDS JNHN01000160.1 115589 116413 2 + 825 FIG00402937: hypothetical protein - none -
fig|6666666.230104.peg.1420 CDS JNHN01000160.1 118898 116562 -2 - 2337 FIG00413484: hypothetical protein - none -
fig|6666666.230104.peg.1421 CDS JNHN01000160.1 119315 118911 -2 - 405 hypothetical protein - none -
fig|6666666.230104.peg.1422 CDS JNHN01000160.1 121140 119470 -3 - 1671 TPR-repeat-containing proteins - none -
fig|6666666.230104.peg.1423 CDS JNHN01000160.1 121911 121429 -3 - 483 FIG00404769: hypothetical protein - none -
fig|6666666.230104.peg.1424 CDS JNHN01000160.1 122410 121901 -1 - 510 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.1425 CDS JNHN01000160.1 123241 122471 -1 - 771 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230104.peg.1426 CDS JNHN01000160.1 125135 123243 -2 - 1893 Biosynthetic arginine decarboxylase (EC 4.1.1.19) Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.230104.peg.1427 CDS JNHN01000160.1 125798 125271 -2 - 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.230104.peg.1428 CDS JNHN01000160.1 126463 125861 -1 - 603 Nitroreductase family protein - none -
fig|6666666.230104.peg.1429 CDS JNHN01000160.1 126545 127216 2 + 672 Ribonuclease HI-related protein 3 Ribonuclease H
fig|6666666.230104.peg.1430 CDS JNHN01000160.1 128197 127310 -1 - 888 Sugar phosphate isomerase/epimerase - none -
fig|6666666.230104.peg.1431 CDS JNHN01000160.1 129110 128235 -2 - 876 Probable secreted glycosyl hydrolase - none -
fig|6666666.230104.peg.1432 CDS JNHN01000160.1 130669 129182 -1 - 1488 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) - none -
fig|6666666.230104.peg.1433 CDS JNHN01000160.1 131815 130736 -1 - 1080 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) - none -
fig|6666666.230104.peg.1434 CDS JNHN01000160.1 134077 132239 -1 - 1839 ABC transporter, ATP-binding protein - none -
fig|6666666.230104.peg.1435 CDS JNHN01000161.1 1092 145 -3 - 948 Mobile element protein - none -
fig|6666666.230104.peg.1436 CDS JNHN01000161.1 1310 1128 -2 - 183 hypothetical protein - none -
fig|6666666.230104.peg.1437 CDS JNHN01000161.1 2047 1622 -1 - 426 Sulfur acceptor protein SufE for iron-sulfur cluster assembly Iron-sulfur cluster assembly
fig|6666666.230104.peg.1438 CDS JNHN01000161.1 3103 2090 -1 - 1014 Aminopeptidase Y (Arg, Lys, Leu preference) (EC 3.4.11.15) Aminopeptidases (EC 3.4.11.-)
fig|6666666.230104.peg.1439 CDS JNHN01000161.1 4038 3100 -3 - 939 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230104.peg.1440 CDS JNHN01000161.1 4296 5216 3 + 921 phosphotransbutyrylase (EC 2.3.1.19) - none -
fig|6666666.230104.peg.1441 CDS JNHN01000161.1 5261 6343 2 + 1083 Butyrate kinase (EC 2.7.2.7) - none -
fig|6666666.230104.peg.1442 CDS JNHN01000161.1 8416 6488 -1 - 1929 Putative isomerase - none -
fig|6666666.230104.peg.1443 CDS JNHN01000161.1 11580 8437 -3 - 3144 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.1444 CDS JNHN01000161.1 12202 11600 -1 - 603 putative surface protein - none -
fig|6666666.230104.peg.1445 CDS JNHN01000161.1 12477 12199 -3 - 279 FIG00407176: hypothetical protein - none -
fig|6666666.230104.peg.1446 CDS JNHN01000161.1 14183 12609 -2 - 1575 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.1447 CDS JNHN01000161.1 17376 14254 -3 - 3123 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.1448 CDS JNHN01000161.1 17905 17702 -1 - 204 hypothetical protein - none -
fig|6666666.230104.peg.1449 CDS JNHN01000161.1 20121 18568 -3 - 1554 FIG00404818: hypothetical protein - none -
fig|6666666.230104.peg.1450 CDS JNHN01000161.1 20109 20231 3 + 123 hypothetical protein - none -
fig|6666666.230104.peg.1451 CDS JNHN01000161.1 20288 20896 2 + 609 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.230104.peg.1452 CDS JNHN01000161.1 21829 20903 -1 - 927 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.230104.peg.1453 CDS JNHN01000161.1 22120 23613 1 + 1494 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.230104.peg.1454 CDS JNHN01000161.1 23726 24307 2 + 582 FIG00937271: hypothetical protein - none -
fig|6666666.230104.peg.1455 CDS JNHN01000161.1 26398 24437 -1 - 1962 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.230104.peg.1456 CDS JNHN01000161.1 26720 26604 -2 - 117 SSU ribosomal protein S20p - none -
fig|6666666.230104.peg.1457 CDS JNHN01000161.1 27259 27987 1 + 729 DNA recombination and repair protein RecO DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.230104.peg.1458 CDS JNHN01000161.1 28774 28325 -1 - 450 Transamidase GatB domain protein Macromolecular synthesis operon
fig|6666666.230104.peg.1459 CDS JNHN01000161.1 30157 28844 -1 - 1314 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.230104.peg.1460 CDS JNHN01000161.1 31624 30191 -1 - 1434 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.230104.peg.1461 CDS JNHN01000161.1 32445 31708 -3 - 738 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.230104.peg.1462 CDS JNHN01000161.1 33883 32438 -1 - 1446 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.230104.peg.1463 CDS JNHN01000161.1 35227 33953 -1 - 1275 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.230104.peg.1464 CDS JNHN01000161.1 36592 35276 -1 - 1317 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.230104.peg.1465 CDS JNHN01000161.1 38015 36684 -2 - 1332 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.230104.peg.1466 CDS JNHN01000161.1 39382 38114 -1 - 1269 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.230104.peg.1467 CDS JNHN01000161.1 40893 39505 -3 - 1389 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.230104.peg.1468 CDS JNHN01000161.1 43137 40999 -3 - 2139 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.230104.peg.1469 CDS JNHN01000161.1 43575 43225 -3 - 351 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.230104.peg.1470 CDS JNHN01000161.1 44508 43585 -3 - 924 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.230104.peg.1471 CDS JNHN01000161.1 44992 44516 -1 - 477 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.230104.peg.1472 CDS JNHN01000161.1 45091 45330 1 + 240 hypothetical protein - none -
fig|6666666.230104.peg.1473 CDS JNHN01000161.1 46977 45514 -3 - 1464 FIG00937589: hypothetical protein - none -
fig|6666666.230104.peg.1474 CDS JNHN01000161.1 47607 47104 -3 - 504 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.1475 CDS JNHN01000161.1 48487 47984 -1 - 504 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.1476 CDS JNHN01000161.1 48703 49521 1 + 819 Hemolysin A - none -
fig|6666666.230104.peg.1477 CDS JNHN01000161.1 49565 50542 2 + 978 Hemolysin A - none -
fig|6666666.230104.peg.1478 CDS JNHN01000161.1 51896 50571 -2 - 1326 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.230104.peg.1479 CDS JNHN01000161.1 52109 52546 2 + 438 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.230104.peg.1480 CDS JNHN01000161.1 52593 54443 3 + 1851 FIG00898077: hypothetical protein - none -
fig|6666666.230104.peg.1481 CDS JNHN01000161.1 54421 55008 1 + 588 FIG00406555: hypothetical protein - none -
fig|6666666.230104.peg.1482 CDS JNHN01000161.1 55058 56359 2 + 1302 TolA protein Ton and Tol transport systems
fig|6666666.230104.peg.1483 CDS JNHN01000161.1 57437 56367 -2 - 1071 Acetylornithine deacetylase (EC 3.5.1.16) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230104.peg.1484 CDS JNHN01000161.1 58151 57528 -2 - 624 FIG00414346: hypothetical protein - none -
fig|6666666.230104.peg.1485 CDS JNHN01000161.1 58363 60168 1 + 1806 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) - none -
fig|6666666.230104.peg.1486 CDS JNHN01000161.1 60579 60692 3 + 114 hypothetical protein - none -
fig|6666666.230104.peg.1487 CDS JNHN01000161.1 61131 64205 3 + 3075 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.1488 CDS JNHN01000161.1 64215 65822 3 + 1608 hypothetical protein - none -
fig|6666666.230104.peg.1489 CDS JNHN01000161.1 65951 67036 2 + 1086 FIG00406036: hypothetical protein - none -
fig|6666666.230104.peg.1490 CDS JNHN01000161.1 67122 69572 3 + 2451 glycosyl hydrolase, family 9 - none -
fig|6666666.230104.peg.1491 CDS JNHN01000161.1 69584 70810 2 + 1227 N-acetylglucosamine related transporter, NagX - none -
fig|6666666.230104.peg.1492 CDS JNHN01000162.1 1401 835 -3 - 567 Translation elongation factor P - none -
fig|6666666.230104.peg.1493 CDS JNHN01000162.1 1521 1757 3 + 237 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.230104.peg.1494 CDS JNHN01000163.1 7 630 1 + 624 hypothetical protein - none -
fig|6666666.230104.peg.1495 CDS JNHN01000163.1 599 1552 2 + 954 hypothetical protein - none -
fig|6666666.230104.peg.1496 CDS JNHN01000163.1 2046 2423 3 + 378 hypothetical protein - none -
fig|6666666.230104.peg.1497 CDS JNHN01000163.1 3284 3556 2 + 273 hypothetical protein - none -
fig|6666666.230104.peg.1498 CDS JNHN01000163.1 3567 3695 3 + 129 hypothetical protein - none -
fig|6666666.230104.peg.1499 CDS JNHN01000163.1 4801 4358 -1 - 444 hypothetical protein - none -
fig|6666666.230104.peg.1500 CDS JNHN01000163.1 5531 6055 2 + 525 SECRETION ACTIVATOR PROTEIN - none -
fig|6666666.230104.peg.1501 CDS JNHN01000163.1 6246 6662 3 + 417 hypothetical protein - none -
fig|6666666.230104.peg.1502 CDS JNHN01000163.1 6649 10464 1 + 3816 Phage protein - none -
fig|6666666.230104.peg.1503 CDS JNHN01000163.1 10461 12236 3 + 1776 hypothetical protein - none -
fig|6666666.230104.peg.1504 CDS JNHN01000163.1 12340 12534 1 + 195 hypothetical protein - none -
fig|6666666.230104.peg.1505 CDS JNHN01000163.1 12573 13001 3 + 429 hypothetical protein - none -
fig|6666666.230104.peg.1506 CDS JNHN01000163.1 13580 13161 -2 - 420 hypothetical protein - none -
fig|6666666.230104.peg.1507 CDS JNHN01000163.1 13823 13626 -2 - 198 hypothetical protein - none -
fig|6666666.230104.peg.1508 CDS JNHN01000163.1 14096 14455 2 + 360 hypothetical protein - none -
fig|6666666.230104.peg.1509 CDS JNHN01000163.1 15417 15614 3 + 198 hypothetical protein - none -
fig|6666666.230104.peg.1510 CDS JNHN01000163.1 15614 15970 2 + 357 hypothetical protein - none -
fig|6666666.230104.peg.1511 CDS JNHN01000163.1 15967 16161 1 + 195 hypothetical protein - none -
fig|6666666.230104.peg.1512 CDS JNHN01000163.1 16142 16453 2 + 312 hypothetical protein - none -
fig|6666666.230104.peg.1513 CDS JNHN01000163.1 17671 16517 -1 - 1155 integrase/recombinase - none -
fig|6666666.230104.peg.1514 CDS JNHN01000163.1 19099 18098 -1 - 1002 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.230104.peg.1515 CDS JNHN01000163.1 19293 20129 3 + 837 FIG00938655: hypothetical protein - none -
fig|6666666.230104.peg.1516 CDS JNHN01000163.1 20426 20602 2 + 177 hypothetical protein - none -
fig|6666666.230104.peg.1517 CDS JNHN01000163.1 20626 20922 1 + 297 hypothetical protein - none -
fig|6666666.230104.peg.1518 CDS JNHN01000163.1 20937 21854 3 + 918 FIG00410951: hypothetical protein - none -
fig|6666666.230104.peg.1519 CDS JNHN01000163.1 23267 21939 -2 - 1329 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.1520 CDS JNHN01000163.1 24401 23298 -2 - 1104 Membrane fusion efflux protein - none -
fig|6666666.230104.peg.1521 CDS JNHN01000163.1 25721 24480 -2 - 1242 ABC transporter permease protein - none -
fig|6666666.230104.peg.1522 CDS JNHN01000163.1 26986 25727 -1 - 1260 ABC transporter permease protein - none -
fig|6666666.230104.peg.1523 CDS JNHN01000163.1 27757 27041 -1 - 717 ABC transporter ATP-binding protein YvcR - none -
fig|6666666.230104.peg.1524 CDS JNHN01000163.1 27934 28914 1 + 981 Glucokinase (EC 2.7.1.2) Glycolysis and Gluconeogenesis
fig|6666666.230104.peg.1525 CDS JNHN01000163.1 29389 29276 -1 - 114 hypothetical protein - none -
fig|6666666.230104.peg.1526 CDS JNHN01000163.1 30025 29672 -1 - 354 LSU ribosomal protein L19p - none -
fig|6666666.230104.peg.1527 CDS JNHN01000163.1 30279 31055 3 + 777 5@1-nucleotidase (EC 3.1.3.5) Purine conversions
fig|6666666.230104.peg.1528 CDS JNHN01000163.1 31087 31995 1 + 909 5@1-nucleotidase (EC 3.1.3.5) Purine conversions
fig|6666666.230104.peg.1529 CDS JNHN01000163.1 31997 35011 2 + 3015 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230104.peg.1530 CDS JNHN01000163.1 35032 35514 1 + 483 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230104.peg.1531 CDS JNHN01000163.1 35524 38076 1 + 2553 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230104.peg.1532 CDS JNHN01000163.1 38813 38184 -2 - 630 FIG00404706: hypothetical protein - none -
fig|6666666.230104.peg.1533 CDS JNHN01000163.1 39576 38938 -3 - 639 FIG00404238: hypothetical protein - none -
fig|6666666.230104.peg.1534 CDS JNHN01000163.1 41783 39768 -2 - 2016 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.1535 CDS JNHN01000163.1 42053 41790 -2 - 264 Putative ion-channel protein - none -
fig|6666666.230104.peg.1536 CDS JNHN01000164.1 20 1108 2 + 1089 Response regulator of zinc sigma-54-dependent two-component system Zinc resistance
fig|6666666.230104.peg.1537 CDS JNHN01000164.1 1578 3299 3 + 1722 Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) Potassium homeostasis
fig|6666666.230104.peg.1538 CDS JNHN01000164.1 3330 5378 3 + 2049 Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) Potassium homeostasis
fig|6666666.230104.peg.1539 CDS JNHN01000164.1 5391 5963 3 + 573 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) Potassium homeostasis
fig|6666666.230104.peg.1540 CDS JNHN01000164.1 6110 6865 2 + 756 FrrB - none -
fig|6666666.230104.peg.1541 CDS JNHN01000164.1 6900 8099 3 + 1200 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.230104.peg.1542 CDS JNHN01000164.1 8120 9559 2 + 1440 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.230104.peg.1543 CDS JNHN01000164.1 10315 9566 -1 - 750 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.1544 CDS JNHN01000164.1 12110 10470 -2 - 1641 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.230104.peg.1545 CDS JNHN01000164.1 13341 12217 -3 - 1125 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.230104.peg.1546 CDS JNHN01000164.1 14650 13391 -1 - 1260 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.230104.peg.1547 CDS JNHN01000164.1 15245 15631 2 + 387 FIG00937093: hypothetical protein - none -
fig|6666666.230104.peg.1548 CDS JNHN01000164.1 15757 15638 -1 - 120 hypothetical protein - none -
fig|6666666.230104.peg.1549 CDS JNHN01000164.1 15708 17609 3 + 1902 membrane protein, putative - none -
fig|6666666.230104.peg.1550 CDS JNHN01000164.1 17624 18838 2 + 1215 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.230104.peg.1551 CDS JNHN01000164.1 18920 20113 2 + 1194 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230104.peg.1552 CDS JNHN01000164.1 20534 20370 -2 - 165 hypothetical protein - none -
fig|6666666.230104.peg.1553 CDS JNHN01000164.1 22864 20903 -1 - 1962 two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.1554 CDS JNHN01000164.1 24732 22861 -3 - 1872 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.1555 CDS JNHN01000164.1 26690 24876 -2 - 1815 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.230104.peg.1556 CDS JNHN01000164.1 26833 27141 1 + 309 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.230104.peg.1557 CDS JNHN01000164.1 27138 27482 3 + 345 FIG00408297: hypothetical protein - none -
fig|6666666.230104.peg.1558 CDS JNHN01000164.1 28883 27576 -2 - 1308 FIG01093408: hypothetical protein - none -
fig|6666666.230104.peg.1559 CDS JNHN01000164.1 30452 28935 -2 - 1518 glycoside hydrolase family 30, candidate beta-glycosidase - none -
fig|6666666.230104.peg.1560 CDS JNHN01000164.1 32004 30478 -3 - 1527 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.1561 CDS JNHN01000164.1 35007 32023 -3 - 2985 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.1562 CDS JNHN01000164.1 35379 37094 3 + 1716 Regulatory protein SusR Cellulosome
fig|6666666.230104.peg.1563 CDS JNHN01000164.1 37684 37544 -1 - 141 hypothetical protein - none -
fig|6666666.230104.peg.1564 CDS JNHN01000164.1 37773 37976 3 + 204 hypothetical protein - none -
fig|6666666.230104.peg.1565 CDS JNHN01000165.1 2568 2377 -3 - 192 hypothetical protein - none -
fig|6666666.230104.peg.1566 CDS JNHN01000165.1 3145 2555 -1 - 591 FIG00405000: hypothetical protein - none -
fig|6666666.230104.peg.1567 CDS JNHN01000165.1 3408 3274 -3 - 135 hypothetical protein - none -
fig|6666666.230104.peg.1568 CDS JNHN01000165.1 5195 3549 -2 - 1647 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.1569 CDS JNHN01000165.1 8145 5224 -3 - 2922 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.1570 CDS JNHN01000165.1 8731 8603 -1 - 129 hypothetical protein - none -
fig|6666666.230104.peg.1571 CDS JNHN01000165.1 10261 9071 -1 - 1191 Integrase - none -
fig|6666666.230104.peg.1572 CDS JNHN01000166.1 21 224 3 + 204 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.1573 CDS JNHN01000166.1 609 1463 3 + 855 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.1574 CDS JNHN01000166.1 1547 2743 2 + 1197 FIG00417587: hypothetical protein - none -
fig|6666666.230104.peg.1575 CDS JNHN01000166.1 2759 3949 2 + 1191 FIG00411772: hypothetical protein - none -
fig|6666666.230104.peg.1576 CDS JNHN01000166.1 3987 6596 3 + 2610 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.1577 CDS JNHN01000166.1 6697 8406 1 + 1710 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230104.peg.1578 CDS JNHN01000166.1 8411 10987 2 + 2577 FIG00405611: hypothetical protein - none -
fig|6666666.230104.peg.1579 CDS JNHN01000166.1 11179 11544 1 + 366 FIG00406892: hypothetical protein - none -
fig|6666666.230104.peg.1580 CDS JNHN01000166.1 12794 11640 -2 - 1155 Acyltransferase - none -
fig|6666666.230104.peg.1581 CDS JNHN01000166.1 13458 12895 -3 - 564 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230104.peg.1582 CDS JNHN01000166.1 13632 13928 3 + 297 hypothetical protein - none -
fig|6666666.230104.peg.1583 CDS JNHN01000166.1 14794 14300 -1 - 495 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.230104.peg.1584 CDS JNHN01000166.1 15621 14938 -3 - 684 FIG170660: TPR domain protein - none -
fig|6666666.230104.peg.1585 CDS JNHN01000166.1 15848 15729 -2 - 120 hypothetical protein - none -
fig|6666666.230104.peg.1586 CDS JNHN01000166.1 16071 15931 -3 - 141 hypothetical protein - none -
fig|6666666.230104.peg.1587 CDS JNHN01000167.1 366 1919 3 + 1554 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.230104.peg.1588 CDS JNHN01000167.1 1959 3266 3 + 1308 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.230104.peg.1589 CDS JNHN01000167.1 3363 4034 3 + 672 Lipolytic enzyme, G-D-S-L precursor - none -
fig|6666666.230104.peg.1590 CDS JNHN01000167.1 4717 4055 -1 - 663 Hcp transcriptional regulator HcpR (Crp/Fnr family) Nitrosative stress
fig|6666666.230104.peg.1591 CDS JNHN01000167.1 5508 4819 -3 - 690 PROBABLE INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.230104.peg.1592 CDS JNHN01000167.1 5858 5688 -2 - 171 FIG00417011: hypothetical protein - none -
fig|6666666.230104.peg.1593 CDS JNHN01000167.1 5859 7619 3 + 1761 Putative glycogen debranching enzyme, archaeal type, TIGR01561 Glycogen metabolism
fig|6666666.230104.peg.1594 CDS JNHN01000167.1 7646 8902 2 + 1257 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230104.peg.1595 CDS JNHN01000167.1 8920 10335 1 + 1416 Alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.230104.peg.1596 CDS JNHN01000167.1 11999 10416 -2 - 1584 FIG00898509: hypothetical protein - none -
fig|6666666.230104.peg.1597 CDS JNHN01000167.1 12847 12023 -1 - 825 Similar to glycogen synthase (EC 2.4.1.21) - none -
fig|6666666.230104.peg.1598 CDS JNHN01000167.1 13094 13951 2 + 858 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.230104.peg.1599 CDS JNHN01000167.1 13987 14337 1 + 351 Aspartate 1-decarboxylase (EC 4.1.1.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.230104.peg.1600 CDS JNHN01000167.1 16047 14401 -3 - 1647 FIG00407931: hypothetical protein - none -
fig|6666666.230104.peg.1601 CDS JNHN01000167.1 18455 16155 -2 - 2301 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230104.peg.1602 CDS JNHN01000167.1 18691 20787 1 + 2097 putative TonB-dependent receptor - none -
fig|6666666.230104.peg.1603 CDS JNHN01000167.1 20793 21806 3 + 1014 putative two-component system sensor protein, no kinase domain - none -
fig|6666666.230104.peg.1604 CDS JNHN01000167.1 21808 22509 1 + 702 two-component system response regulator protein - none -
fig|6666666.230104.peg.1605 CDS JNHN01000167.1 23931 22657 -3 - 1275 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.230104.peg.1606 CDS JNHN01000167.1 24186 24073 -3 - 114 LSU ribosomal protein L27p CBSS-176279.3.peg.868
fig|6666666.230104.peg.1607 CDS JNHN01000167.1 24682 24365 -1 - 318 LSU ribosomal protein L21p CBSS-176279.3.peg.868
fig|6666666.230104.peg.1608 CDS JNHN01000167.1 24756 24896 3 + 141 hypothetical protein - none -
fig|6666666.230104.peg.1609 CDS JNHN01000167.1 26921 24909 -2 - 2013 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.230104.peg.1610 CDS JNHN01000167.1 27095 29326 2 + 2232 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230104.peg.1611 CDS JNHN01000167.1 29338 29931 1 + 594 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.1612 CDS JNHN01000167.1 29931 30932 3 + 1002 Putative anti-sigma factor - none -
fig|6666666.230104.peg.1613 CDS JNHN01000167.1 31016 33274 2 + 2259 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230104.peg.1614 CDS JNHN01000167.1 33579 36965 3 + 3387 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.1615 CDS JNHN01000167.1 36977 38566 2 + 1590 FIG00937161: hypothetical protein - none -
fig|6666666.230104.peg.1616 CDS JNHN01000167.1 38589 39602 3 + 1014 Endo-beta-N-acetylglucosaminidase F2 - none -
fig|6666666.230104.peg.1617 CDS JNHN01000167.1 39612 40766 3 + 1155 Patatin-like protein - none -
fig|6666666.230104.peg.1618 CDS JNHN01000167.1 40805 42787 2 + 1983 endo-beta-N-acetylglucosaminidase - none -
fig|6666666.230104.peg.1619 CDS JNHN01000167.1 42954 45224 3 + 2271 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230104.peg.1620 CDS JNHN01000167.1 45300 46556 3 + 1257 AmpG protein, beta-lactamase induction signal transducer - none -
fig|6666666.230104.peg.1621 CDS JNHN01000167.1 46580 47551 2 + 972 COG2152 predicted glycoside hydrolase - none -
fig|6666666.230104.peg.1622 CDS JNHN01000168.1 536 1363 2 + 828 hypothetical protein - none -
fig|6666666.230104.peg.1623 CDS JNHN01000168.1 2440 2129 -1 - 312 ATP-dependent Clp protease adaptor protein ClpS ClpAS cluster;
Proteolysis in bacteria, ATP-dependent
fig|6666666.230104.peg.1624 CDS JNHN01000168.1 3162 2473 -3 - 690 FIG00405132: hypothetical protein - none -
fig|6666666.230104.peg.1625 CDS JNHN01000168.1 4062 3205 -3 - 858 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230104.peg.1626 CDS JNHN01000168.1 4501 4052 -1 - 450 FIG074102: hypothetical protein - none -
fig|6666666.230104.peg.1627 CDS JNHN01000168.1 5211 5005 -3 - 207 hypothetical protein - none -
fig|6666666.230104.peg.1628 CDS JNHN01000168.1 6079 5600 -1 - 480 FIG00405194: hypothetical protein - none -
fig|6666666.230104.peg.1629 CDS JNHN01000168.1 7416 6124 -3 - 1293 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.230104.peg.1630 CDS JNHN01000168.1 7511 8323 2 + 813 Acetyl esterase - none -
fig|6666666.230104.peg.1631 CDS JNHN01000168.1 9237 8332 -3 - 906 FIG00405844: hypothetical protein - none -
fig|6666666.230104.peg.1632 CDS JNHN01000168.1 10633 9251 -1 - 1383 Carboxyl-terminal protease - none -
fig|6666666.230104.peg.1633 CDS JNHN01000168.1 10857 12143 3 + 1287 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.230104.peg.1634 CDS JNHN01000168.1 12166 13230 1 + 1065 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.230104.peg.1635 CDS JNHN01000168.1 13883 13221 -2 - 663 DNA-binding response regulator, LuxR family - none -
fig|6666666.230104.peg.1636 CDS JNHN01000168.1 14507 13974 -2 - 534 FIG00403648: hypothetical protein - none -
fig|6666666.230104.peg.1637 CDS JNHN01000168.1 16067 14631 -2 - 1437 Na(+)/H(+) antiporter - none -
fig|6666666.230104.peg.1638 CDS JNHN01000168.1 17411 16236 -2 - 1176 Putative transport protein - none -
fig|6666666.230104.peg.1639 CDS JNHN01000168.1 17550 17663 3 + 114 hypothetical protein - none -
fig|6666666.230104.peg.1640 CDS JNHN01000168.1 17951 19519 2 + 1569 Two-component system sensor histidine kinase/response regulator, hybrid - none -
fig|6666666.230104.peg.1641 CDS JNHN01000168.1 20714 19971 -2 - 744 hypothetical protein - none -
fig|6666666.230104.peg.1642 CDS JNHN01000168.1 22471 20978 -1 - 1494 hypothetical protein - none -
fig|6666666.230104.peg.1643 CDS JNHN01000168.1 23153 23458 2 + 306 transcriptional regulator, putative - none -
fig|6666666.230104.peg.1644 CDS JNHN01000168.1 23896 24966 1 + 1071 hypothetical protein - none -
fig|6666666.230104.peg.1645 CDS JNHN01000168.1 28211 25077 -2 - 3135 Piwi domain protein - none -
fig|6666666.230104.peg.1646 CDS JNHN01000168.1 29281 28253 -1 - 1029 putative transcriptional regulator - none -
fig|6666666.230104.peg.1647 CDS JNHN01000168.1 32957 29355 -2 - 3603 RecD-like DNA helicase YrrC DNA repair, bacterial RecBCD pathway
fig|6666666.230104.peg.1648 CDS JNHN01000168.1 37272 32968 -3 - 4305 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.230104.peg.1649 CDS JNHN01000168.1 38510 37302 -2 - 1209 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.230104.peg.1650 CDS JNHN01000168.1 41103 38515 -3 - 2589 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.230104.peg.1651 CDS JNHN01000168.1 41423 41214 -2 - 210 hypothetical protein - none -
fig|6666666.230104.peg.1652 CDS JNHN01000168.1 41632 42498 1 + 867 hypothetical protein - none -
fig|6666666.230104.peg.1653 CDS JNHN01000168.1 43997 42699 -2 - 1299 Mobile element protein - none -
fig|6666666.230104.peg.1654 CDS JNHN01000168.1 44308 44027 -1 - 282 hypothetical protein - none -
fig|6666666.230104.peg.1655 CDS JNHN01000168.1 44318 44455 2 + 138 hypothetical protein - none -
fig|6666666.230104.peg.1656 CDS JNHN01000168.1 45402 44467 -3 - 936 Mobilization protein BmgA - none -
fig|6666666.230104.peg.1657 CDS JNHN01000168.1 45601 45392 -1 - 210 mobilization protein MocB - none -
fig|6666666.230104.peg.1658 CDS JNHN01000168.1 46913 45840 -2 - 1074 FIG00897215: hypothetical protein - none -
fig|6666666.230104.peg.1659 CDS JNHN01000168.1 48364 46997 -1 - 1368 hypothetical protein - none -
fig|6666666.230104.peg.1660 CDS JNHN01000168.1 48744 48376 -3 - 369 mobilizable transposon, xis protein - none -
fig|6666666.230104.peg.1661 CDS JNHN01000168.1 48909 50138 3 + 1230 hypothetical protein - none -
fig|6666666.230104.peg.1662 CDS JNHN01000168.1 50919 50149 -3 - 771 Mobilizable transposon, tnpC protein - none -
fig|6666666.230104.peg.1663 CDS JNHN01000168.1 51214 52659 1 + 1446 syc0386_c - none -
fig|6666666.230104.peg.1664 CDS JNHN01000168.1 53774 52710 -2 - 1065 Integrase - none -
fig|6666666.230104.peg.1665 CDS JNHN01000168.1 54496 53909 -1 - 588 putative transposase - none -
fig|6666666.230104.peg.1666 CDS JNHN01000168.1 56487 55066 -3 - 1422 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.230104.peg.1667 CDS JNHN01000168.1 57619 56741 -1 - 879 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions
fig|6666666.230104.peg.1668 CDS JNHN01000168.1 58699 57713 -1 - 987 DUF1432 domain-containing protein - none -
fig|6666666.230104.peg.1669 CDS JNHN01000168.1 59233 58763 -1 - 471 FIG00898184: hypothetical protein - none -
fig|6666666.230104.peg.1670 CDS JNHN01000168.1 60672 59242 -3 - 1431 FIG00898772: hypothetical protein - none -
fig|6666666.230104.peg.1671 CDS JNHN01000168.1 60832 61581 1 + 750 tRNA(Cytosine32)-2-thiocytidine synthetase tRNA modification Bacteria
fig|6666666.230104.peg.1672 CDS JNHN01000168.1 61610 61978 2 + 369 membrane protein, putative - none -
fig|6666666.230104.peg.1673 CDS JNHN01000168.1 63016 62000 -1 - 1017 Thiamin biosynthesis lipoprotein ApbE Iron-sulfur cluster assembly
fig|6666666.230104.peg.1674 CDS JNHN01000168.1 63516 63043 -3 - 474 Integral membrane protein - none -
fig|6666666.230104.peg.1675 CDS JNHN01000168.1 64396 63629 -1 - 768 FIG00937024: hypothetical protein - none -
fig|6666666.230104.peg.1676 CDS JNHN01000168.1 64757 64365 -2 - 393 FIG00404794: hypothetical protein - none -
fig|6666666.230104.peg.1677 CDS JNHN01000168.1 65806 64853 -1 - 954 Glycosyl transferase - none -
fig|6666666.230104.peg.1678 CDS JNHN01000168.1 66371 65862 -2 - 510 FIG00896350: hypothetical protein - none -
fig|6666666.230104.peg.1679 CDS JNHN01000168.1 67165 70056 1 + 2892 FIG00417103: hypothetical protein - none -
fig|6666666.230104.peg.1680 CDS JNHN01000168.1 70348 73551 1 + 3204 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.1681 CDS JNHN01000168.1 73570 75159 1 + 1590 RagB/SusD domain protein - none -
fig|6666666.230104.peg.1682 CDS JNHN01000168.1 75191 76564 2 + 1374 FIG00412289: hypothetical protein - none -
fig|6666666.230104.peg.1683 CDS JNHN01000168.1 76628 78064 2 + 1437 Beta-glucanase precursor (EC 3.2.1.73) - none -
fig|6666666.230104.peg.1684 CDS JNHN01000168.1 78153 79445 3 + 1293 FIG00409141: hypothetical protein - none -
fig|6666666.230104.peg.1685 CDS JNHN01000168.1 79457 81700 2 + 2244 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.1686 CDS JNHN01000168.1 83086 81797 -1 - 1290 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.230104.peg.1687 CDS JNHN01000168.1 83820 83152 -3 - 669 Quinolone resistance protein - none -
fig|6666666.230104.peg.1688 CDS JNHN01000168.1 84211 83834 -1 - 378 Protein crcB homolog - none -
fig|6666666.230104.peg.1689 CDS JNHN01000168.1 84937 85281 1 + 345 FIG00416107: hypothetical protein - none -
fig|6666666.230104.peg.1690 CDS JNHN01000168.1 85278 85403 3 + 126 FIG00416107: hypothetical protein - none -
fig|6666666.230104.peg.1691 CDS JNHN01000168.1 85622 87784 2 + 2163 Alpha-glucosidase SusB (EC 3.2.1.20) Cellulosome
fig|6666666.230104.peg.1692 CDS JNHN01000168.1 87990 88931 3 + 942 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.230104.peg.1693 CDS JNHN01000168.1 89741 88935 -2 - 807 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.1694 CDS JNHN01000168.1 89799 91325 3 + 1527 Amidophosphoribosyltransferase (EC 2.4.2.14) Colicin V and Bacteriocin Production Cluster;
De Novo Purine Biosynthesis
fig|6666666.230104.peg.1695 CDS JNHN01000168.1 91529 92752 2 + 1224 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.230104.peg.1696 CDS JNHN01000168.1 92784 93872 3 + 1089 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.230104.peg.1697 CDS JNHN01000168.1 95489 93963 -2 - 1527 FIG00409921: hypothetical protein - none -
fig|6666666.230104.peg.1698 CDS JNHN01000168.1 96004 95672 -1 - 333 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent - none -
fig|6666666.230104.peg.1699 CDS JNHN01000168.1 96112 97119 1 + 1008 FIG00405867: hypothetical protein - none -
fig|6666666.230104.peg.1700 CDS JNHN01000168.1 97402 98412 1 + 1011 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.230104.peg.1701 CDS JNHN01000168.1 98686 98516 -1 - 171 hypothetical protein - none -
fig|6666666.230104.peg.1702 CDS JNHN01000168.1 100710 98860 -3 - 1851 Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135) Cellulosome
fig|6666666.230104.peg.1703 CDS JNHN01000168.1 102089 100821 -2 - 1269 TPR-domain containing protein - none -
fig|6666666.230104.peg.1704 CDS JNHN01000168.1 103506 102346 -3 - 1161 Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Propionyl-CoA to Succinyl-CoA Module
fig|6666666.230104.peg.1705 CDS JNHN01000168.1 103942 103508 -1 - 435 Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.230104.peg.1706 CDS JNHN01000168.1 104898 103966 -3 - 933 Membrane protein associated with methylmalonyl-CoA decarboxylase Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.230104.peg.1707 CDS JNHN01000168.1 106483 104930 -1 - 1554 Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Propionyl-CoA to Succinyl-CoA Module
fig|6666666.230104.peg.1708 CDS JNHN01000168.1 107057 106542 -2 - 516 Methylmalonyl-CoA epimerase (EC 5.1.99.1) Propionyl-CoA to Succinyl-CoA Module
fig|6666666.230104.peg.1709 CDS JNHN01000168.1 107248 108735 1 + 1488 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.230104.peg.1710 CDS JNHN01000168.1 108879 110240 3 + 1362 Two-component system response regulator - none -
fig|6666666.230104.peg.1711 CDS JNHN01000168.1 110231 111544 2 + 1314 Sensor histidine kinase - none -
fig|6666666.230104.peg.1712 CDS JNHN01000168.1 113190 111571 -3 - 1620 L-aspartate beta-decarboxylase (EC 4.1.1.12) - none -
fig|6666666.230104.peg.1713 CDS JNHN01000168.1 115167 113467 -3 - 1701 putative transport protein - none -
fig|6666666.230104.peg.1714 CDS JNHN01000168.1 115350 117887 3 + 2538 FIG00407069: hypothetical protein - none -
fig|6666666.230104.peg.1715 CDS JNHN01000168.1 117995 119284 2 + 1290 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.230104.peg.1716 CDS JNHN01000168.1 119423 119896 2 + 474 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.230104.peg.1717 CDS JNHN01000168.1 119881 120408 1 + 528 FIG00403675: hypothetical protein - none -
fig|6666666.230104.peg.1718 CDS JNHN01000168.1 120398 121051 2 + 654 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230104.peg.1719 CDS JNHN01000168.1 121048 121980 1 + 933 FIG00939867: hypothetical protein - none -
fig|6666666.230104.peg.1720 CDS JNHN01000168.1 121989 123161 3 + 1173 NADH-dependent butanol dehydrogenase A (EC 1.1.1.-) - none -
fig|6666666.230104.peg.1721 CDS JNHN01000168.1 124816 123242 -1 - 1575 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.230104.peg.1722 CDS JNHN01000168.1 125327 125052 -2 - 276 DNA-binding protein HU DNA structural proteins, bacterial
fig|6666666.230104.peg.1723 CDS JNHN01000168.1 125485 126525 1 + 1041 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.230104.peg.1724 CDS JNHN01000168.1 126598 127053 1 + 456 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.230104.peg.1725 CDS JNHN01000168.1 127104 128426 3 + 1323 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.230104.peg.1726 CDS JNHN01000168.1 128540 129085 2 + 546 Siderophore (Surfactin) biosynthesis regulatory protein - none -
fig|6666666.230104.peg.1727 CDS JNHN01000168.1 130464 129091 -3 - 1374 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.230104.peg.1728 CDS JNHN01000168.1 133059 131266 -3 - 1794 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.230104.peg.1729 CDS JNHN01000168.1 133723 133034 -1 - 690 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.230104.peg.1730 CDS JNHN01000168.1 134024 135208 2 + 1185 FIG00406664: hypothetical protein - none -
fig|6666666.230104.peg.1731 CDS JNHN01000168.1 135595 136830 1 + 1236 Mobile element protein - none -
fig|6666666.230104.peg.1732 CDS JNHN01000168.1 137085 137303 3 + 219 hypothetical protein - none -
fig|6666666.230104.peg.1733 CDS JNHN01000168.1 137367 137504 3 + 138 FIG00415457: hypothetical protein - none -
fig|6666666.230104.peg.1734 CDS JNHN01000168.1 137510 138109 2 + 600 FIG00413964: hypothetical protein - none -
fig|6666666.230104.peg.1735 CDS JNHN01000168.1 138726 138493 -3 - 234 hypothetical protein - none -
fig|6666666.230104.peg.1736 CDS JNHN01000168.1 139020 139607 3 + 588 FIG00415993: hypothetical protein - none -
fig|6666666.230104.peg.1737 CDS JNHN01000168.1 139639 140031 1 + 393 hypothetical protein - none -
fig|6666666.230104.peg.1738 CDS JNHN01000168.1 140242 140120 -1 - 123 hypothetical protein - none -
fig|6666666.230104.peg.1739 CDS JNHN01000168.1 140879 140556 -2 - 324 FIG00404202: hypothetical protein - none -
fig|6666666.230104.peg.1740 CDS JNHN01000168.1 141203 140916 -2 - 288 hypothetical protein - none -
fig|6666666.230104.peg.1741 CDS JNHN01000168.1 141521 141210 -2 - 312 FIG00897868: hypothetical protein - none -
fig|6666666.230104.peg.1742 CDS JNHN01000168.1 141969 142115 3 + 147 hypothetical protein - none -
fig|6666666.230104.peg.1743 CDS JNHN01000168.1 142105 142599 1 + 495 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1744 CDS JNHN01000168.1 142827 143198 3 + 372 Mobile element protein - none -
fig|6666666.230104.peg.1745 CDS JNHN01000169.1 33 1007 3 + 975 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230104.peg.1746 CDS JNHN01000169.1 1019 2302 2 + 1284 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230104.peg.1747 CDS JNHN01000169.1 2492 3526 2 + 1035 Glycosyl transferase, group 1 family protein - none -
fig|6666666.230104.peg.1748 CDS JNHN01000169.1 3658 4413 1 + 756 Probable UDP-N-acetyl-D-mannosaminuronic acid transferase (EC 2.4.1.-) - none -
fig|6666666.230104.peg.1749 CDS JNHN01000169.1 4596 5498 3 + 903 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) Capsular heptose biosynthesis
fig|6666666.230104.peg.1750 CDS JNHN01000169.1 5495 6448 2 + 954 GDP-L-fucose synthetase (EC 1.1.1.271) Capsular heptose biosynthesis
fig|6666666.230104.peg.1751 CDS JNHN01000169.1 6662 6850 2 + 189 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) Mannose Metabolism
fig|6666666.230104.peg.1752 CDS JNHN01000169.1 7067 7192 2 + 126 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) / Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism;
Mannose Metabolism
fig|6666666.230104.peg.1753 CDS JNHN01000169.1 8044 8433 1 + 390 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.230104.peg.1754 CDS JNHN01000169.1 8732 8619 -2 - 114 hypothetical protein - none -
fig|6666666.230104.peg.1755 CDS JNHN01000169.1 8754 9272 3 + 519 hypothetical protein - none -
fig|6666666.230104.peg.1756 CDS JNHN01000169.1 10888 10682 -1 - 207 hypothetical protein - none -
fig|6666666.230104.peg.1757 CDS JNHN01000169.1 11394 14603 3 + 3210 TonB-dependent outer membrane receptor - none -
fig|6666666.230104.peg.1758 CDS JNHN01000169.1 14643 16472 3 + 1830 FIG00409833: hypothetical protein - none -
fig|6666666.230104.peg.1759 CDS JNHN01000169.1 16804 17610 1 + 807 FIG00407332: hypothetical protein - none -
fig|6666666.230104.peg.1760 CDS JNHN01000169.1 17674 19563 1 + 1890 COG0488: ATPase components of ABC transporters with duplicated ATPase domains - none -
fig|6666666.230104.peg.1761 CDS JNHN01000169.1 19608 20450 3 + 843 Histidinol-phosphatase (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.230104.peg.1762 CDS JNHN01000169.1 20952 20524 -3 - 429 Thioredoxin - none -
fig|6666666.230104.peg.1763 CDS JNHN01000169.1 21258 20962 -3 - 297 TRX family - none -
fig|6666666.230104.peg.1764 CDS JNHN01000169.1 23489 21330 -2 - 2160 FIG00899111: hypothetical protein - none -
fig|6666666.230104.peg.1765 CDS JNHN01000169.1 25794 23629 -3 - 2166 FIG00403185: hypothetical protein - none -
fig|6666666.230104.peg.1766 CDS JNHN01000169.1 27082 25847 -1 - 1236 Putative arylsulfatase regulatory protein - none -
fig|6666666.230104.peg.1767 CDS JNHN01000169.1 27231 27965 3 + 735 FIG00937518: hypothetical protein - none -
fig|6666666.230104.peg.1768 CDS JNHN01000169.1 28807 28049 -1 - 759 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230104.peg.1769 CDS JNHN01000169.1 30032 28857 -2 - 1176 putative phosphoesterase - none -
fig|6666666.230104.peg.1770 CDS JNHN01000169.1 30646 30020 -1 - 627 FIG00402738: hypothetical protein - none -
fig|6666666.230104.peg.1771 CDS JNHN01000169.1 31136 30651 -2 - 486 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.1772 CDS JNHN01000169.1 32244 31330 -3 - 915 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Methionine Biosynthesis
fig|6666666.230104.peg.1773 CDS JNHN01000169.1 33631 32285 -1 - 1347 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.230104.peg.1774 CDS JNHN01000169.1 34431 33676 -3 - 756 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.230104.peg.1775 CDS JNHN01000169.1 34921 38463 1 + 3543 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.230104.peg.1776 CDS JNHN01000169.1 39127 38483 -1 - 645 FIG00407628: hypothetical protein - none -
fig|6666666.230104.peg.1777 CDS JNHN01000169.1 41001 39163 -3 - 1839 putative Fe-S oxidoreductase - none -
fig|6666666.230104.peg.1778 CDS JNHN01000169.1 41216 40998 -2 - 219 FIG00404338: hypothetical protein - none -
fig|6666666.230104.peg.1779 CDS JNHN01000169.1 41531 41217 -2 - 315 FIG00937687: hypothetical protein - none -
fig|6666666.230104.peg.1780 CDS JNHN01000169.1 44578 41648 -1 - 2931 Xanthan lyase - none -
fig|6666666.230104.peg.1781 CDS JNHN01000169.1 45605 44727 -2 - 879 hypothetical protein-signal peptide and transmembrane prediction - none -
fig|6666666.230104.peg.1782 CDS JNHN01000169.1 47679 45775 -3 - 1905 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Sialic Acid Metabolism
fig|6666666.230104.peg.1783 CDS JNHN01000169.1 48264 48965 3 + 702 PUTATIVE PERIPLASMIC PROTEIN - none -
fig|6666666.230104.peg.1784 CDS JNHN01000169.1 49728 48937 -3 - 792 Possible hydrolase - none -
fig|6666666.230104.peg.1785 CDS JNHN01000169.1 50320 49766 -1 - 555 Acyltransferase family protein - none -
fig|6666666.230104.peg.1786 CDS JNHN01000169.1 50591 50322 -2 - 270 FIG00405699: hypothetical protein - none -
fig|6666666.230104.peg.1787 CDS JNHN01000169.1 50895 52169 3 + 1275 RND efflux system, membrane fusion protein CmeA Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.1788 CDS JNHN01000169.1 52177 55287 1 + 3111 RND efflux system, inner membrane transporter CmeB Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.1789 CDS JNHN01000169.1 55305 56681 3 + 1377 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.1790 CDS JNHN01000169.1 57269 56772 -2 - 498 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.230104.peg.1791 CDS JNHN01000169.1 57510 57349 -3 - 162 putative RNA-binding protein rbpA - none -
fig|6666666.230104.peg.1792 CDS JNHN01000169.1 57962 59608 2 + 1647 Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90) Glycolysis and Gluconeogenesis
fig|6666666.230104.peg.1793 CDS JNHN01000169.1 59678 60550 2 + 873 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) (EC 3.2.1.17) - none -
fig|6666666.230104.peg.1794 CDS JNHN01000169.1 61447 60605 -1 - 843 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.230104.peg.1795 CDS JNHN01000169.1 61564 61698 1 + 135 hypothetical protein - none -
fig|6666666.230104.peg.1796 CDS JNHN01000169.1 61729 63111 1 + 1383 Vitellogenin II precursor - none -
fig|6666666.230104.peg.1797 CDS JNHN01000169.1 63148 64806 1 + 1659 FIG00937714: hypothetical protein - none -
fig|6666666.230104.peg.1798 CDS JNHN01000169.1 65808 64918 -3 - 891 FIG00896412: hypothetical protein - none -
fig|6666666.230104.peg.1799 CDS JNHN01000169.1 66314 65844 -2 - 471 hypothetical protein - none -
fig|6666666.230104.peg.1800 CDS JNHN01000169.1 66785 66327 -2 - 459 FIG00406179: hypothetical protein - none -
fig|6666666.230104.peg.1801 CDS JNHN01000169.1 67306 66782 -1 - 525 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.1802 CDS JNHN01000169.1 67988 67431 -2 - 558 Rubrerythrin Oxidative stress;
Rubrerythrin
fig|6666666.230104.peg.1803 CDS JNHN01000169.1 68449 68015 -1 - 435 Peroxide stress regulator; Ferric uptake regulation protein; Fe2+/Zn2+ uptake regulation proteins Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.230104.peg.1804 CDS JNHN01000169.1 68746 70671 1 + 1926 NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.230104.peg.1805 CDS JNHN01000169.1 70838 70668 -2 - 171 Gll1113 protein - none -
fig|6666666.230104.peg.1806 CDS JNHN01000169.1 71743 70913 -1 - 831 Transglycosylase - none -
fig|6666666.230104.peg.1807 CDS JNHN01000169.1 73884 71755 -3 - 2130 FIG00936866: hypothetical protein - none -
fig|6666666.230104.peg.1808 CDS JNHN01000169.1 74765 74220 -2 - 546 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) - none -
fig|6666666.230104.peg.1809 CDS JNHN01000169.1 75549 74788 -3 - 762 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) - none -
fig|6666666.230104.peg.1810 CDS JNHN01000169.1 75734 75561 -2 - 174 FIG00404525: hypothetical protein - none -
fig|6666666.230104.peg.1811 CDS JNHN01000169.1 76816 75731 -1 - 1086 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) - none -
fig|6666666.230104.peg.1812 CDS JNHN01000169.1 77063 76836 -2 - 228 2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3) - none -
fig|6666666.230104.peg.1813 CDS JNHN01000169.1 77355 77080 -3 - 276 FIG00403100: hypothetical protein - none -
fig|6666666.230104.peg.1814 CDS JNHN01000169.1 77968 77531 -1 - 438 Ribose 5-phosphate isomerase B (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.230104.peg.1815 CDS JNHN01000169.1 80051 78060 -2 - 1992 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.230104.peg.1816 CDS JNHN01000169.1 81804 80260 -3 - 1545 Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55) L-Arabinose utilization
fig|6666666.230104.peg.1817 CDS JNHN01000169.1 83426 81828 -2 - 1599 Ribulokinase (EC 2.7.1.16) L-Arabinose utilization
fig|6666666.230104.peg.1818 CDS JNHN01000169.1 85059 83551 -3 - 1509 L-arabinose isomerase (EC 5.3.1.4) L-Arabinose utilization
fig|6666666.230104.peg.1819 CDS JNHN01000169.1 85784 85098 -2 - 687 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-Arabinose utilization
fig|6666666.230104.peg.1820 CDS JNHN01000169.1 86504 85827 -2 - 678 Hypothetical Nudix-like regulator - none -
fig|6666666.230104.peg.1821 CDS JNHN01000169.1 88258 86564 -1 - 1695 Predicted sodium-dependent galactose transporter - none -
fig|6666666.230104.peg.1822 CDS JNHN01000169.1 89425 88286 -1 - 1140 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.1823 CDS JNHN01000169.1 89518 89685 1 + 168 hypothetical protein - none -
fig|6666666.230104.peg.1824 CDS JNHN01000169.1 90846 89692 -3 - 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.230104.peg.1825 CDS JNHN01000169.1 91747 90896 -1 - 852 Predicted glucose transporter in maltodextrin utilization gene cluster Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.1826 CDS JNHN01000170.1 2079 976 -3 - 1104 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.1827 CDS JNHN01000170.1 2272 3243 1 + 972 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.230104.peg.1828 CDS JNHN01000170.1 3578 3318 -2 - 261 FIG00402836: hypothetical protein - none -
fig|6666666.230104.peg.1829 CDS JNHN01000170.1 3944 3591 -2 - 354 FIG00405237: hypothetical protein - none -
fig|6666666.230104.peg.1830 CDS JNHN01000170.1 4173 3964 -3 - 210 FIG00403582: hypothetical protein - none -
fig|6666666.230104.peg.1831 CDS JNHN01000170.1 5545 4268 -1 - 1278 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.230104.peg.1832 CDS JNHN01000170.1 5720 6124 2 + 405 FIG00407519: hypothetical protein - none -
fig|6666666.230104.peg.1833 CDS JNHN01000170.1 6173 6673 2 + 501 FIG00936940: hypothetical protein - none -
fig|6666666.230104.peg.1834 CDS JNHN01000170.1 7208 8032 2 + 825 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.230104.peg.1835 CDS JNHN01000170.1 8040 9593 3 + 1554 Sulfate permease Cysteine Biosynthesis
fig|6666666.230104.peg.1836 CDS JNHN01000170.1 9615 10220 3 + 606 Adenylylsulfate kinase (EC 2.7.1.25) Cysteine Biosynthesis
fig|6666666.230104.peg.1837 CDS JNHN01000170.1 10227 11138 3 + 912 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) Cysteine Biosynthesis
fig|6666666.230104.peg.1838 CDS JNHN01000170.1 11179 12651 1 + 1473 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) Cysteine Biosynthesis
fig|6666666.230104.peg.1839 CDS JNHN01000170.1 12715 13821 1 + 1107 FIG00896523: hypothetical protein - none -
fig|6666666.230104.peg.1840 CDS JNHN01000170.1 13868 14812 2 + 945 FIG00897664: hypothetical protein - none -
fig|6666666.230104.peg.1841 CDS JNHN01000170.1 15647 14895 -2 - 753 FIG00897943: hypothetical protein - none -
fig|6666666.230104.peg.1842 CDS JNHN01000170.1 16897 15773 -1 - 1125 Major outer membrane protein OmpA - none -
fig|6666666.230104.peg.1843 CDS JNHN01000170.1 17843 16953 -2 - 891 FIG00408816: hypothetical protein - none -
fig|6666666.230104.peg.1844 CDS JNHN01000170.1 18969 17857 -3 - 1113 FIG00896374: hypothetical protein - none -
fig|6666666.230104.peg.1845 CDS JNHN01000170.1 20586 19447 -3 - 1140 Phage integrase precursor - none -
fig|6666666.230104.peg.1846 CDS JNHN01000170.1 21266 21114 -2 - 153 hypothetical protein - none -
fig|6666666.230104.peg.1847 CDS JNHN01000170.1 21478 22368 1 + 891 FIG00896374: hypothetical protein - none -
fig|6666666.230104.peg.1848 CDS JNHN01000170.1 22382 23290 2 + 909 FIG00408816: hypothetical protein - none -
fig|6666666.230104.peg.1849 CDS JNHN01000170.1 23332 24456 1 + 1125 Major outer membrane protein OmpA - none -
fig|6666666.230104.peg.1850 CDS JNHN01000170.1 24584 25336 2 + 753 FIG00897943: hypothetical protein - none -
fig|6666666.230104.peg.1851 CDS JNHN01000170.1 25522 25878 1 + 357 Putative Holliday junction resolvase YqgF - none -
fig|6666666.230104.peg.1852 CDS JNHN01000170.1 25922 26479 2 + 558 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.230104.peg.1853 CDS JNHN01000170.1 26597 28657 2 + 2061 TPR repeat precursor - none -
fig|6666666.230104.peg.1854 CDS JNHN01000170.1 28737 30677 3 + 1941 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.230104.peg.1855 CDS JNHN01000170.1 30798 31400 3 + 603 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.230104.peg.1856 CDS JNHN01000170.1 31823 32116 2 + 294 LSU ribosomal protein L20p - none -
fig|6666666.230104.peg.1857 CDS JNHN01000170.1 33962 32655 -2 - 1308 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) Aromatic amino acid interconversions with aryl acids
fig|6666666.230104.peg.1858 CDS JNHN01000170.1 34574 33993 -2 - 582 Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8) Aromatic amino acid interconversions with aryl acids;
Indole-pyruvate oxidoreductase complex
fig|6666666.230104.peg.1859 CDS JNHN01000170.1 36171 34579 -3 - 1593 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) Aromatic amino acid interconversions with aryl acids;
Indole-pyruvate oxidoreductase complex
fig|6666666.230104.peg.1860 CDS JNHN01000170.1 37279 36248 -1 - 1032 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.230104.peg.1861 CDS JNHN01000170.1 38455 37346 -1 - 1110 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.230104.peg.1862 CDS JNHN01000170.1 38679 38452 -3 - 228 Sialic acid-specific 9-O-acetylesterase - none -
fig|6666666.230104.peg.1863 CDS JNHN01000170.1 39098 38793 -2 - 306 Sialic acid-specific 9-O-acetylesterase - none -
fig|6666666.230104.peg.1864 CDS JNHN01000170.1 39708 39541 -3 - 168 hypothetical protein - none -
fig|6666666.230104.peg.1865 CDS JNHN01000170.1 39750 41267 3 + 1518 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria
fig|6666666.230104.peg.1866 CDS JNHN01000170.1 41248 41424 1 + 177 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria
fig|6666666.230104.peg.1867 CDS JNHN01000170.1 41421 41552 3 + 132 hypothetical protein - none -
fig|6666666.230104.peg.1868 CDS JNHN01000170.1 41832 44033 3 + 2202 Polysialic acid transport protein KpsD precursor - none -
fig|6666666.230104.peg.1869 CDS JNHN01000170.1 44042 45148 2 + 1107 putative protein involved in capsular polysaccharide biosynthesis - none -
fig|6666666.230104.peg.1870 CDS JNHN01000170.1 45145 45474 1 + 330 hypothetical protein - none -
fig|6666666.230104.peg.1871 CDS JNHN01000170.1 45474 45932 3 + 459 Tryptophan synthase beta chain like (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.230104.peg.1872 CDS JNHN01000170.1 47186 46014 -2 - 1173 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.230104.peg.1873 CDS JNHN01000170.1 47830 47198 -1 - 633 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.230104.peg.1874 CDS JNHN01000170.1 48094 49671 1 + 1578 ABC transporter ATP-binding protein uup - none -
fig|6666666.230104.peg.1875 CDS JNHN01000170.1 51004 49952 -1 - 1053 FIG00404447: hypothetical protein - none -
fig|6666666.230104.peg.1876 CDS JNHN01000170.1 51117 52013 3 + 897 putative metal-dependent membrane protease - none -
fig|6666666.230104.peg.1877 CDS JNHN01000170.1 54202 52067 -1 - 2136 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.230104.peg.1878 CDS JNHN01000170.1 54221 54349 2 + 129 FIG00406763: hypothetical protein - none -
fig|6666666.230104.peg.1879 CDS JNHN01000170.1 54399 54899 3 + 501 FIG00406763: hypothetical protein - none -
fig|6666666.230104.peg.1880 CDS JNHN01000170.1 54955 56802 1 + 1848 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.1881 CDS JNHN01000170.1 56829 58574 3 + 1746 5@1-nucleotidase (EC 3.1.3.5); 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16); Putative UDP-sugar hydrolase (EC 3.6.1.45) CBSS-226186.1.peg.4416;
Purine conversions;
Purine conversions
fig|6666666.230104.peg.1882 CDS JNHN01000170.1 58614 58958 3 + 345 hypothetical protein - none -
fig|6666666.230104.peg.1883 CDS JNHN01000170.1 59195 61435 2 + 2241 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.230104.peg.1884 CDS JNHN01000170.1 61564 62388 1 + 825 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.1885 CDS JNHN01000170.1 62451 63212 3 + 762 Creatinine amidohydrolase (EC 3.5.2.10) Creatine and Creatinine Degradation
fig|6666666.230104.peg.1886 CDS JNHN01000170.1 63822 63400 -3 - 423 FIG00936914: hypothetical protein - none -
fig|6666666.230104.peg.1887 CDS JNHN01000170.1 65178 63862 -3 - 1317 FIG00410646: hypothetical protein - none -
fig|6666666.230104.peg.1888 CDS JNHN01000170.1 66455 65208 -2 - 1248 FIG00416648: hypothetical protein - none -
fig|6666666.230104.peg.1889 CDS JNHN01000170.1 67066 66497 -1 - 570 FIG00405599: hypothetical protein - none -
fig|6666666.230104.peg.1890 CDS JNHN01000170.1 67207 67082 -1 - 126 FIG00405599: hypothetical protein - none -
fig|6666666.230104.peg.1891 CDS JNHN01000170.1 68307 67201 -3 - 1107 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) Capsular heptose biosynthesis
fig|6666666.230104.peg.1892 CDS JNHN01000170.1 69110 68340 -2 - 771 N-acetylmannosaminyltransferase (EC 2.4.1.187) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230104.peg.1893 CDS JNHN01000170.1 70313 69213 -2 - 1101 GDP-L-fucose synthetase (EC 1.1.1.271) Capsular heptose biosynthesis
fig|6666666.230104.peg.1894 CDS JNHN01000170.1 71402 70350 -2 - 1053 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230104.peg.1895 CDS JNHN01000170.1 72541 71585 -1 - 957 probable glycosyl transferase - none -
fig|6666666.230104.peg.1896 CDS JNHN01000170.1 73672 72548 -1 - 1125 Gll3707 protein - none -
fig|6666666.230104.peg.1897 CDS JNHN01000170.1 74781 73678 -3 - 1104 Related to F420H2-dehydrogenase, beta subunit - none -
fig|6666666.230104.peg.1898 CDS JNHN01000170.1 75956 74778 -2 - 1179 Glycosyl transferase, group 1 CBSS-258594.1.peg.3339
fig|6666666.230104.peg.1899 CDS JNHN01000170.1 76929 75958 -3 - 972 hypothetical protein - none -
fig|6666666.230104.peg.1900 CDS JNHN01000170.1 77924 76926 -2 - 999 Succinoglycan biosynthesis protein - none -
fig|6666666.230104.peg.1901 CDS JNHN01000170.1 79123 77921 -1 - 1203 hypothetical protein - none -
fig|6666666.230104.peg.1902 CDS JNHN01000170.1 80183 79164 -2 - 1020 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230104.peg.1903 CDS JNHN01000170.1 81290 80187 -2 - 1104 Gll3707 protein - none -
fig|6666666.230104.peg.1904 CDS JNHN01000170.1 82444 81290 -1 - 1155 F420H2:quinone oxidoreductase - none -
fig|6666666.230104.peg.1905 CDS JNHN01000170.1 83447 82449 -2 - 999 hypothetical protein - none -
fig|6666666.230104.peg.1906 CDS JNHN01000170.1 84331 83483 -1 - 849 hypothetical protein - none -
fig|6666666.230104.peg.1907 CDS JNHN01000170.1 85575 84694 -3 - 882 unknown - none -
fig|6666666.230104.peg.1908 CDS JNHN01000170.1 85709 85572 -2 - 138 hypothetical protein - none -
fig|6666666.230104.peg.1909 CDS JNHN01000170.1 87643 85772 -1 - 1872 hypothetical protein - none -
fig|6666666.230104.peg.1910 CDS JNHN01000170.1 88255 87647 -1 - 609 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.230104.peg.1911 CDS JNHN01000170.1 89004 88330 -3 - 675 hypothetical protein - none -
fig|6666666.230104.peg.1912 CDS JNHN01000170.1 89038 89163 1 + 126 hypothetical protein - none -
fig|6666666.230104.peg.1913 CDS JNHN01000170.1 90810 89230 -3 - 1581 putative flippase - none -
fig|6666666.230104.peg.1914 CDS JNHN01000170.1 91111 90917 -1 - 195 Conserved protein, with a weak D-galactarate dehydratase/altronate hydrolase domain - none -
fig|6666666.230104.peg.1915 CDS JNHN01000170.1 91541 91116 -2 - 426 Conserved protein, with a weak D-galactarate dehydratase/altronate hydrolase domain - none -
fig|6666666.230104.peg.1916 CDS JNHN01000170.1 92096 91941 -2 - 156 hypothetical protein - none -
fig|6666666.230104.peg.1917 CDS JNHN01000170.1 92237 94333 2 + 2097 FIG00414498: hypothetical protein - none -
fig|6666666.230104.peg.1918 CDS JNHN01000170.1 94590 94339 -3 - 252 hypothetical protein - none -
fig|6666666.230104.peg.1919 CDS JNHN01000170.1 94875 95414 3 + 540 FIG00413911: hypothetical protein - none -
fig|6666666.230104.peg.1920 CDS JNHN01000170.1 95506 95619 1 + 114 hypothetical protein - none -
fig|6666666.230104.peg.1921 CDS JNHN01000170.1 95624 96073 2 + 450 N-acetylmuramoyl-L-alanine amidase - none -
fig|6666666.230104.peg.1922 CDS JNHN01000170.1 96602 96063 -2 - 540 Capsular polysaccharide transcription antitermination protein, UpxY family - none -
fig|6666666.230104.peg.1923 CDS JNHN01000170.1 99174 96781 -3 - 2394 Tyrosine-protein kinase Wzc (EC 2.7.10.2) CBSS-258594.1.peg.3339
fig|6666666.230104.peg.1924 CDS JNHN01000170.1 100018 99191 -1 - 828 Polysaccharide export outer membrane protein - none -
fig|6666666.230104.peg.1925 CDS JNHN01000170.1 101460 100057 -3 - 1404 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230104.peg.1926 CDS JNHN01000170.1 102179 101964 -2 - 216 Tyrosine type site-specific recombinase, Mpi regulator - none -
fig|6666666.230104.peg.1927 CDS JNHN01000170.1 102376 103503 1 + 1128 Integrase - none -
fig|6666666.230104.peg.1928 CDS JNHN01000170.1 103807 104952 1 + 1146 Integrase - none -
fig|6666666.230104.peg.1929 CDS JNHN01000170.1 105016 105792 1 + 777 hypothetical protein - none -
fig|6666666.230104.peg.1930 CDS JNHN01000170.1 106006 106302 1 + 297 putative excisionase - none -
fig|6666666.230104.peg.1931 CDS JNHN01000170.1 106299 106748 3 + 450 putative excisionase - none -
fig|6666666.230104.peg.1932 CDS JNHN01000170.1 106745 107833 2 + 1089 FIG00898246: hypothetical protein - none -
fig|6666666.230104.peg.1933 CDS JNHN01000170.1 107897 108778 2 + 882 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230104.peg.1934 CDS JNHN01000170.1 108859 110295 1 + 1437 ATP-dependent DNA helicase RecG - none -
fig|6666666.230104.peg.1935 CDS JNHN01000170.1 110667 110353 -3 - 315 FIG00410669: hypothetical protein - none -
fig|6666666.230104.peg.1936 CDS JNHN01000170.1 111877 110744 -1 - 1134 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.230104.peg.1937 CDS JNHN01000170.1 112359 112778 3 + 420 hypothetical protein - none -
fig|6666666.230104.peg.1938 CDS JNHN01000170.1 112768 113103 1 + 336 FIG00898505: hypothetical protein - none -
fig|6666666.230104.peg.1939 CDS JNHN01000170.1 113158 113523 1 + 366 Conjugative transposon protein TraE Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1940 CDS JNHN01000170.1 113530 113832 1 + 303 FIG00897980: hypothetical protein - none -
fig|6666666.230104.peg.1941 CDS JNHN01000170.1 114018 115373 3 + 1356 hypothetical protein - none -
fig|6666666.230104.peg.1942 CDS JNHN01000170.1 115395 115808 3 + 414 hypothetical protein - none -
fig|6666666.230104.peg.1943 CDS JNHN01000170.1 115814 118522 2 + 2709 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1944 CDS JNHN01000170.1 118535 118858 2 + 324 hypothetical protein - none -
fig|6666666.230104.peg.1945 CDS JNHN01000170.1 118977 121448 3 + 2472 FIG00898215: hypothetical protein - none -
fig|6666666.230104.peg.1946 CDS JNHN01000170.1 121441 122178 1 + 738 FIG00897793: hypothetical protein - none -
fig|6666666.230104.peg.1947 CDS JNHN01000170.1 122210 122950 2 + 741 FIG00896865: hypothetical protein - none -
fig|6666666.230104.peg.1948 CDS JNHN01000170.1 122999 123847 2 + 849 Phage antirepressor protein - none -
fig|6666666.230104.peg.1949 CDS JNHN01000170.1 123851 124981 2 + 1131 FIG01290742: hypothetical protein - none -
fig|6666666.230104.peg.1950 CDS JNHN01000170.1 125061 125675 3 + 615 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1951 CDS JNHN01000170.1 125677 126018 1 + 342 hypothetical protein - none -
fig|6666666.230104.peg.1952 CDS JNHN01000170.1 125996 127246 2 + 1251 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1953 CDS JNHN01000170.1 127301 128146 2 + 846 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1954 CDS JNHN01000170.1 128136 128678 3 + 543 FIG00407458: hypothetical protein - none -
fig|6666666.230104.peg.1955 CDS JNHN01000170.1 128771 129496 2 + 726 FIG00403811: hypothetical protein - none -
fig|6666666.230104.peg.1956 CDS JNHN01000170.1 129977 131698 2 + 1722 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.1957 CDS JNHN01000170.1 132753 131875 -3 - 879 hypothetical protein - none -
fig|6666666.230104.peg.1958 CDS JNHN01000170.1 133694 133497 -2 - 198 hypothetical protein - none -
fig|6666666.230104.peg.1959 CDS JNHN01000170.1 135585 133912 -3 - 1674 hypothetical protein - none -
fig|6666666.230104.peg.1960 CDS JNHN01000170.1 136938 135598 -3 - 1341 hypothetical protein - none -
fig|6666666.230104.peg.1961 CDS JNHN01000170.1 137897 138361 2 + 465 Mobile element protein - none -
fig|6666666.230104.peg.1962 CDS JNHN01000170.1 138491 138715 2 + 225 hypothetical protein - none -
fig|6666666.230104.peg.1963 CDS JNHN01000170.1 138679 138951 1 + 273 hypothetical protein - none -
fig|6666666.230104.peg.1964 CDS JNHN01000170.1 140364 141125 3 + 762 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.230104.peg.1965 CDS JNHN01000170.1 141263 143875 2 + 2613 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.230104.peg.1966 CDS JNHN01000170.1 144397 144528 1 + 132 hypothetical protein - none -
fig|6666666.230104.peg.1967 CDS JNHN01000170.1 144862 146049 1 + 1188 hypothetical protein - none -
fig|6666666.230104.peg.1968 CDS JNHN01000170.1 146061 146786 3 + 726 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.230104.peg.1969 CDS JNHN01000170.1 146783 148003 2 + 1221 hypothetical protein - none -
fig|6666666.230104.peg.1970 CDS JNHN01000170.1 148005 149192 3 + 1188 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.230104.peg.1971 CDS JNHN01000170.1 149259 150101 3 + 843 COG1180: Radical SAM, Pyruvate-formate lyase-activating enzyme like - none -
fig|6666666.230104.peg.1972 CDS JNHN01000170.1 150122 151087 2 + 966 Predicted protease of the collagenase family - none -
fig|6666666.230104.peg.1973 CDS JNHN01000170.1 151084 152007 1 + 924 Hypothetical protein PBPRB0710 - none -
fig|6666666.230104.peg.1974 CDS JNHN01000170.1 152348 152515 2 + 168 hypothetical protein - none -
fig|6666666.230104.peg.1975 CDS JNHN01000170.1 152879 152718 -2 - 162 hypothetical protein - none -
fig|6666666.230104.peg.1976 CDS JNHN01000170.1 153738 153112 -3 - 627 Mobile element protein - none -
fig|6666666.230104.peg.1977 CDS JNHN01000170.1 154089 153928 -3 - 162 hypothetical protein - none -
fig|6666666.230104.peg.1978 CDS JNHN01000170.1 154670 154389 -2 - 282 conserved hypothetical protein, IS related - none -
fig|6666666.230104.peg.1979 CDS JNHN01000170.1 154724 154873 2 + 150 hypothetical protein - none -
fig|6666666.230104.peg.1980 CDS JNHN01000170.1 156255 155113 -3 - 1143 Biotin synthesis protein BioZ Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.230104.peg.1981 CDS JNHN01000170.1 156624 156370 -3 - 255 hypothetical protein - none -
fig|6666666.230104.peg.1982 CDS JNHN01000170.1 157667 157080 -2 - 588 hypothetical protein - none -
fig|6666666.230104.peg.1983 CDS JNHN01000170.1 159161 158154 -2 - 1008 Abortive infection bacteriophage resistance protein - none -
fig|6666666.230104.peg.1984 CDS JNHN01000170.1 159767 159471 -2 - 297 Peptidase M23B - none -
fig|6666666.230104.peg.1985 CDS JNHN01000170.1 160389 161144 3 + 756 FIG00899284: hypothetical protein - none -
fig|6666666.230104.peg.1986 CDS JNHN01000170.1 161147 161386 2 + 240 hypothetical protein - none -
fig|6666666.230104.peg.1987 CDS JNHN01000170.1 161414 163015 2 + 1602 FIG00402755: hypothetical protein - none -
fig|6666666.230104.peg.1988 CDS JNHN01000170.1 163053 164738 3 + 1686 FIG00899363: hypothetical protein - none -
fig|6666666.230104.peg.1989 CDS JNHN01000170.1 164753 165238 2 + 486 FIG00408532: hypothetical protein - none -
fig|6666666.230104.peg.1990 CDS JNHN01000170.1 165252 165911 3 + 660 FIG00897775: hypothetical protein - none -
fig|6666666.230104.peg.1991 CDS JNHN01000170.1 165930 166616 3 + 687 FIG00899176: hypothetical protein - none -
fig|6666666.230104.peg.1992 CDS JNHN01000170.1 166659 167300 3 + 642 FIG00897171: hypothetical protein - none -
fig|6666666.230104.peg.1993 CDS JNHN01000170.1 167355 168308 3 + 954 hypothetical protein - none -
fig|6666666.230104.peg.1994 CDS JNHN01000170.1 168286 169548 1 + 1263 Modification methylase Phi3TI - none -
fig|6666666.230104.peg.1995 CDS JNHN01000170.1 169560 170387 3 + 828 putative cell wall endopeptidase family protein - none -
fig|6666666.230104.peg.1996 CDS JNHN01000170.1 170399 170695 2 + 297 hypothetical protein - none -
fig|6666666.230104.peg.1997 CDS JNHN01000170.1 170692 172473 1 + 1782 FIG00896847: hypothetical protein - none -
fig|6666666.230104.peg.1998 CDS JNHN01000170.1 172501 175137 1 + 2637 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.230104.peg.1999 CDS JNHN01000170.1 175177 176691 1 + 1515 putative hemagglutinin - none -
fig|6666666.230104.peg.2000 CDS JNHN01000171.1 128 1039 2 + 912 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230104.peg.2001 CDS JNHN01000171.1 1181 1393 2 + 213 DNA alkylation repair enzyme - none -
fig|6666666.230104.peg.2002 CDS JNHN01000171.1 1493 1825 2 + 333 FIG00898702: hypothetical protein - none -
fig|6666666.230104.peg.2003 CDS JNHN01000171.1 2025 2837 3 + 813 Slr1117 protein - none -
fig|6666666.230104.peg.2004 CDS JNHN01000171.1 3760 2912 -1 - 849 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.2005 CDS JNHN01000171.1 3981 5474 3 + 1494 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.2006 CDS JNHN01000171.1 5579 7540 2 + 1962 ABC transporter ATP-binding protein - none -
fig|6666666.230104.peg.2007 CDS JNHN01000171.1 7576 9597 1 + 2022 Endothelin-converting enzyme 1 precursor (EC 3.4.24.71) - none -
fig|6666666.230104.peg.2008 CDS JNHN01000171.1 9758 11281 2 + 1524 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.230104.peg.2009 CDS JNHN01000171.1 11404 12426 1 + 1023 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster
fig|6666666.230104.peg.2010 CDS JNHN01000171.1 12537 13271 3 + 735 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.230104.peg.2011 CDS JNHN01000171.1 13378 13881 1 + 504 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.230104.peg.2012 CDS JNHN01000171.1 13904 15769 2 + 1866 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
Bacterial cell division cluster;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.230104.peg.2013 CDS JNHN01000171.1 15857 17311 2 + 1455 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Bacterial cell division cluster;
Peptidoglycan Biosynthesis
fig|6666666.230104.peg.2014 CDS JNHN01000171.1 18114 17629 -3 - 486 GldH - none -
fig|6666666.230104.peg.2015 CDS JNHN01000171.1 19468 18092 -1 - 1377 Signal peptidase-like protein Heat shock dnaK gene cluster extended
fig|6666666.230104.peg.2016 CDS JNHN01000171.1 20669 19542 -2 - 1128 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.230104.peg.2017 CDS JNHN01000171.1 21695 20742 -2 - 954 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.230104.peg.2018 CDS JNHN01000171.1 23694 21787 -3 - 1908 FIG00414387: hypothetical protein - none -
fig|6666666.230104.peg.2019 CDS JNHN01000171.1 24034 24951 1 + 918 Homoserine O-succinyltransferase (EC 2.3.1.46) Methionine Biosynthesis
fig|6666666.230104.peg.2020 CDS JNHN01000171.1 24970 26835 1 + 1866 Putative collagenase - none -
fig|6666666.230104.peg.2021 CDS JNHN01000171.1 26877 27932 3 + 1056 FIG00406392: hypothetical protein - none -
fig|6666666.230104.peg.2022 CDS JNHN01000171.1 28003 28296 1 + 294 FIG00414669: hypothetical protein - none -
fig|6666666.230104.peg.2023 CDS JNHN01000171.1 28335 28697 3 + 363 VapC toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.230104.peg.2024 CDS JNHN01000171.1 31266 28810 -3 - 2457 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.2025 CDS JNHN01000171.1 32143 31532 -1 - 612 LuxR family transcriptional regulator - none -
fig|6666666.230104.peg.2026 CDS JNHN01000171.1 36144 32233 -3 - 3912 DNA-binding response regulator, AraC family - none -
fig|6666666.230104.peg.2027 CDS JNHN01000171.1 37941 36319 -3 - 1623 NAD-utilizing dehydrogenases - none -
fig|6666666.230104.peg.2028 CDS JNHN01000171.1 39314 37947 -2 - 1368 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.230104.peg.2029 CDS JNHN01000171.1 39436 39978 1 + 543 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.230104.peg.2030 CDS JNHN01000171.1 41026 39989 -1 - 1038 L-asparaginase I, cytoplasmic (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230104.peg.2031 CDS JNHN01000171.1 41475 43907 3 + 2433 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230104.peg.2032 CDS JNHN01000171.1 43929 45188 3 + 1260 Predicted functional analog of homoserine kinase (EC 2.7.1.-) Threonine and Homoserine Biosynthesis
fig|6666666.230104.peg.2033 CDS JNHN01000171.1 45259 46560 1 + 1302 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.230104.peg.2034 CDS JNHN01000171.1 46939 46766 -1 - 174 hypothetical protein - none -
fig|6666666.230104.peg.2035 CDS JNHN01000171.1 47347 47024 -1 - 324 hypothetical protein - none -
fig|6666666.230104.peg.2036 CDS JNHN01000171.1 47532 47332 -3 - 201 hypothetical protein - none -
fig|6666666.230104.peg.2037 CDS JNHN01000171.1 47542 48477 1 + 936 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.230104.peg.2038 CDS JNHN01000171.1 49114 48437 -1 - 678 Thiamin pyrophosphokinase (EC 2.7.6.2) Thiamin biosynthesis
fig|6666666.230104.peg.2039 CDS JNHN01000171.1 49772 49122 -2 - 651 Predicted thiamin transporter PnuT Thiamin biosynthesis
fig|6666666.230104.peg.2040 CDS JNHN01000171.1 52069 49772 -1 - 2298 Thiamin-regulated outer membrane receptor Omr1 Thiamin biosynthesis
fig|6666666.230104.peg.2041 CDS JNHN01000171.1 52320 53189 3 + 870 Small-conductance mechanosensitive channel - none -
fig|6666666.230104.peg.2042 CDS JNHN01000171.1 53557 53315 -1 - 243 FIG00404225: hypothetical protein - none -
fig|6666666.230104.peg.2043 CDS JNHN01000171.1 53686 54228 1 + 543 hypothetical protein - none -
fig|6666666.230104.peg.2044 CDS JNHN01000171.1 54522 54397 -3 - 126 hypothetical protein - none -
fig|6666666.230104.peg.2045 CDS JNHN01000171.1 54674 55123 2 + 450 hypothetical protein - none -
fig|6666666.230104.peg.2046 CDS JNHN01000171.1 55352 55561 2 + 210 hypothetical protein - none -
fig|6666666.230104.peg.2047 CDS JNHN01000171.1 56198 57574 2 + 1377 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230104.peg.2048 CDS JNHN01000171.1 57714 58553 3 + 840 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.2049 CDS JNHN01000171.1 58562 59335 2 + 774 GCN5-related N-acetyltransferase - none -
fig|6666666.230104.peg.2050 CDS JNHN01000171.1 59340 59570 3 + 231 Tetracycline resistance element mobilization regulatory protein rteC - none -
fig|6666666.230104.peg.2051 CDS JNHN01000171.1 59814 59930 3 + 117 hypothetical protein - none -
fig|6666666.230104.peg.2052 CDS JNHN01000171.1 60239 59997 -2 - 243 Integrase - none -
fig|6666666.230104.peg.2053 CDS JNHN01000171.1 61792 60677 -1 - 1116 Transporter - none -
fig|6666666.230104.peg.2054 CDS JNHN01000171.1 62420 61815 -2 - 606 Thymidine kinase (EC 2.7.1.21) - none -
fig|6666666.230104.peg.2055 CDS JNHN01000171.1 62531 63073 2 + 543 FIG00405769: hypothetical protein - none -
fig|6666666.230104.peg.2056 CDS JNHN01000171.1 63087 63761 3 + 675 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.230104.peg.2057 CDS JNHN01000171.1 63796 64674 1 + 879 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.230104.peg.2058 CDS JNHN01000171.1 64762 65460 1 + 699 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230104.peg.2059 CDS JNHN01000171.1 65585 66178 2 + 594 MarC family integral membrane protein - none -
fig|6666666.230104.peg.2060 CDS JNHN01000171.1 67755 66238 -3 - 1518 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.2061 CDS JNHN01000171.1 70526 67773 -2 - 2754 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.230104.peg.2062 CDS JNHN01000172.1 1228 632 -1 - 597 FIG00413602: hypothetical protein - none -
fig|6666666.230104.peg.2063 CDS JNHN01000172.1 1806 1240 -3 - 567 GTP-binding protein EngB - none -
fig|6666666.230104.peg.2064 CDS JNHN01000172.1 1981 1829 -1 - 153 hypothetical protein - none -
fig|6666666.230104.peg.2065 CDS JNHN01000172.1 2024 2641 2 + 618 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.230104.peg.2066 CDS JNHN01000172.1 2691 3149 3 + 459 FIG01255190: hypothetical protein - none -
fig|6666666.230104.peg.2067 CDS JNHN01000172.1 3163 3699 1 + 537 Spermidine N1-acetyltransferase (EC 2.3.1.57) Polyamine Metabolism
fig|6666666.230104.peg.2068 CDS JNHN01000172.1 4138 3692 -1 - 447 Transcriptional regulator, ArsR family - none -
fig|6666666.230104.peg.2069 CDS JNHN01000172.1 4426 7533 1 + 3108 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.2070 CDS JNHN01000172.1 7554 9134 3 + 1581 FIG00897230: hypothetical protein - none -
fig|6666666.230104.peg.2071 CDS JNHN01000172.1 10479 9163 -3 - 1317 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230104.peg.2072 CDS JNHN01000172.1 11093 11998 2 + 906 Flavoredoxin - none -
fig|6666666.230104.peg.2073 CDS JNHN01000172.1 12010 12825 1 + 816 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) - none -
fig|6666666.230104.peg.2074 CDS JNHN01000172.1 12919 13545 1 + 627 Flavodoxin Flavodoxin
fig|6666666.230104.peg.2075 CDS JNHN01000172.1 13567 14130 1 + 564 Maltose O-acetyltransferase (EC 2.3.1.79) Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.2076 CDS JNHN01000172.1 14153 15019 2 + 867 FIG00898920: hypothetical protein - none -
fig|6666666.230104.peg.2077 CDS JNHN01000172.1 15039 16472 3 + 1434 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.2078 CDS JNHN01000172.1 16476 17645 3 + 1170 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230104.peg.2079 CDS JNHN01000172.1 18041 17622 -2 - 420 FIG00407325: hypothetical protein - none -
fig|6666666.230104.peg.2080 CDS JNHN01000172.1 19020 18136 -3 - 885 transcriptional regulator - none -
fig|6666666.230104.peg.2081 CDS JNHN01000172.1 19326 19024 -3 - 303 hypothetical protein - none -
fig|6666666.230104.peg.2082 CDS JNHN01000172.1 19348 20391 1 + 1044 Fucose permease - none -
fig|6666666.230104.peg.2083 CDS JNHN01000172.1 20907 20383 -3 - 525 Chromate transport protein - none -
fig|6666666.230104.peg.2084 CDS JNHN01000172.1 21455 20904 -2 - 552 Chromate transport protein - none -
fig|6666666.230104.peg.2085 CDS JNHN01000172.1 21648 22043 3 + 396 FIG00406930: hypothetical protein - none -
fig|6666666.230104.peg.2086 CDS JNHN01000172.1 22046 23335 2 + 1290 Co-activator of prophage gene expression IbrA IbrA and IbrB: co-activators of prophage gene expression
fig|6666666.230104.peg.2087 CDS JNHN01000172.1 23332 23865 1 + 534 Co-activator of prophage gene expression IbrB IbrA and IbrB: co-activators of prophage gene expression
fig|6666666.230104.peg.2088 CDS JNHN01000172.1 24031 24966 1 + 936 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) CBSS-296591.1.peg.2330;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230104.peg.2089 CDS JNHN01000172.1 25014 26135 3 + 1122 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.2090 CDS JNHN01000172.1 29147 26256 -2 - 2892 FIG00403299: hypothetical protein - none -
fig|6666666.230104.peg.2091 CDS JNHN01000172.1 32517 29191 -3 - 3327 Helicase - none -
fig|6666666.230104.peg.2092 CDS JNHN01000172.1 33705 32650 -3 - 1056 Choloylglycine hydrolase (EC 3.5.1.24) Bile hydrolysis
fig|6666666.230104.peg.2093 CDS JNHN01000172.1 35853 33793 -3 - 2061 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.230104.peg.2094 CDS JNHN01000172.1 35997 37268 3 + 1272 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) Aromatic amino acid interconversions with aryl acids
fig|6666666.230104.peg.2095 CDS JNHN01000172.1 37328 37753 2 + 426 Amino acid-binding ACT Aromatic amino acid interconversions with aryl acids
fig|6666666.230104.peg.2096 CDS JNHN01000172.1 37937 38758 2 + 822 lipoprotein protein, putative - none -
fig|6666666.230104.peg.2097 CDS JNHN01000172.1 38793 39128 3 + 336 FIG00936941: hypothetical protein - none -
fig|6666666.230104.peg.2098 CDS JNHN01000172.1 39128 39589 2 + 462 FIG00897728: hypothetical protein - none -
fig|6666666.230104.peg.2099 CDS JNHN01000172.1 40459 39758 -1 - 702 FIG00897535: hypothetical protein - none -
fig|6666666.230104.peg.2100 CDS JNHN01000172.1 42323 40533 -2 - 1791 LysM-repeat proteins and domains - none -
fig|6666666.230104.peg.2101 CDS JNHN01000172.1 42513 45347 3 + 2835 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.230104.peg.2102 CDS JNHN01000172.1 45362 45844 2 + 483 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.230104.peg.2103 CDS JNHN01000172.1 45962 47482 2 + 1521 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.230104.peg.2104 CDS JNHN01000172.1 48069 47572 -3 - 498 GCN5-related N-acetyltransferase - none -
fig|6666666.230104.peg.2105 CDS JNHN01000172.1 48177 49637 3 + 1461 Periplasmic [Fe] hydrogenase (EC 1.12.7.2) - none -
fig|6666666.230104.peg.2106 CDS JNHN01000172.1 49634 50692 2 + 1059 [FeFe]-hydrogenase maturation protein HydE - none -
fig|6666666.230104.peg.2107 CDS JNHN01000172.1 50744 52162 2 + 1419 2-iminoacetate synthase (ThiH) (EC 4.1.99.19) - none -
fig|6666666.230104.peg.2108 CDS JNHN01000172.1 52174 53382 1 + 1209 [FeFe]-hydrogenase maturation GTPase HydF - none -
fig|6666666.230104.peg.2109 CDS JNHN01000172.1 53865 53389 -3 - 477 NAD-reducing hydrogenase subunit HoxE (EC 1.12.1.2) - none -
fig|6666666.230104.peg.2110 CDS JNHN01000172.1 55653 53887 -3 - 1767 NADP-reducing [Fe]-hydrogenase, cytoplasmic, alpha subunit (EC 1.12.1.4) - none -
fig|6666666.230104.peg.2111 CDS JNHN01000172.1 57573 55666 -3 - 1908 NAD-reducing hydrogenase subunit HoxF (EC 1.12.1.2) - none -
fig|6666666.230104.peg.2112 CDS JNHN01000172.1 57892 58218 1 + 327 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.230104.peg.2113 CDS JNHN01000172.1 58301 59410 2 + 1110 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230104.peg.2114 CDS JNHN01000172.1 59949 59794 -3 - 156 hypothetical protein - none -
fig|6666666.230104.peg.2115 CDS JNHN01000172.1 59953 60489 1 + 537 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230104.peg.2116 CDS JNHN01000172.1 60525 61013 3 + 489 UpdZ protein - none -
fig|6666666.230104.peg.2117 CDS JNHN01000172.1 61028 62050 2 + 1023 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria
fig|6666666.230104.peg.2118 CDS JNHN01000172.1 62047 63210 1 + 1164 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) - none -
fig|6666666.230104.peg.2119 CDS JNHN01000172.1 63207 63338 3 + 132 hypothetical protein - none -
fig|6666666.230104.peg.2120 CDS JNHN01000172.1 63478 63834 1 + 357 Serine acetyltransferase - none -
fig|6666666.230104.peg.2121 CDS JNHN01000172.1 63831 64514 3 + 684 N-Acetylneuraminate cytidylyltransferase (EC 2.7.7.43) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230104.peg.2122 CDS JNHN01000172.1 64519 65484 1 + 966 N-Acetylneuraminate cytidylyltransferase (EC 2.7.7.43) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230104.peg.2123 CDS JNHN01000172.1 65572 66174 1 + 603 FLAGELLAR PROTEIN G FLAG - none -
fig|6666666.230104.peg.2124 CDS JNHN01000172.1 66340 66585 1 + 246 Lactoylglutathione lyase, YQJC B.subtilis ortholog - none -
fig|6666666.230104.peg.2125 CDS JNHN01000172.1 66582 68162 3 + 1581 FIG00525343: hypothetical protein - none -
fig|6666666.230104.peg.2126 CDS JNHN01000172.1 68167 68391 1 + 225 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230104.peg.2127 CDS JNHN01000172.1 68400 69413 3 + 1014 N-acetylneuraminate synthase (EC 2.5.1.56) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230104.peg.2128 CDS JNHN01000172.1 69502 69816 1 + 315 hypothetical protein - none -
fig|6666666.230104.peg.2129 CDS JNHN01000172.1 70047 70211 3 + 165 hypothetical protein - none -
fig|6666666.230104.peg.2130 CDS JNHN01000172.1 70286 70453 2 + 168 hypothetical protein - none -
fig|6666666.230104.peg.2131 CDS JNHN01000172.1 70829 70467 -2 - 363 N-acetylmuramoyl-L-alanine amidase - none -
fig|6666666.230104.peg.2132 CDS JNHN01000172.1 71508 71023 -3 - 486 FIG00415943: hypothetical protein - none -
fig|6666666.230104.peg.2133 CDS JNHN01000172.1 71717 71935 2 + 219 FIG00417360: hypothetical protein - none -
fig|6666666.230104.peg.2134 CDS JNHN01000172.1 73835 72060 -2 - 1776 FIG00896590: hypothetical protein - none -
fig|6666666.230104.peg.2135 CDS JNHN01000172.1 74519 73887 -2 - 633 FIG00407803: hypothetical protein - none -
fig|6666666.230104.peg.2136 CDS JNHN01000172.1 74672 74821 2 + 150 hypothetical protein - none -
fig|6666666.230104.peg.2137 CDS JNHN01000172.1 74975 75856 2 + 882 FIG00937610: hypothetical protein - none -
fig|6666666.230104.peg.2138 CDS JNHN01000172.1 75866 76465 2 + 600 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.230104.peg.2139 CDS JNHN01000172.1 76462 76818 1 + 357 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.230104.peg.2140 CDS JNHN01000172.1 76823 77788 2 + 966 UDP-glucose 4-epimerase (EC 5.1.3.2) CBSS-296591.1.peg.2330;
Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.230104.peg.2141 CDS JNHN01000172.1 77799 79496 3 + 1698 hypothetical protein - none -
fig|6666666.230104.peg.2142 CDS JNHN01000172.1 79571 80833 2 + 1263 putative polysaccharide biosynthesis protein CpsL - none -
fig|6666666.230104.peg.2143 CDS JNHN01000172.1 80883 81902 3 + 1020 N-acetylneuraminic acid synthase - none -
fig|6666666.230104.peg.2144 CDS JNHN01000172.1 81865 83106 1 + 1242 hypothetical protein - none -
fig|6666666.230104.peg.2145 CDS JNHN01000172.1 83190 83891 3 + 702 Beta-1,4-galactosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.230104.peg.2146 CDS JNHN01000172.1 83940 85064 3 + 1125 glycosyltransferase - none -
fig|6666666.230104.peg.2147 CDS JNHN01000172.1 85073 86056 2 + 984 glycosyltransferase - none -
fig|6666666.230104.peg.2148 CDS JNHN01000172.1 86343 87188 3 + 846 glycosyl transferase, family 2 - none -
fig|6666666.230104.peg.2149 CDS JNHN01000172.1 87246 88142 3 + 897 UDP-glucose 4-epimerase (EC 5.1.3.2) CBSS-296591.1.peg.2330;
Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.230104.peg.2150 CDS JNHN01000172.1 88240 89190 1 + 951 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230104.peg.2151 CDS JNHN01000172.1 89327 90883 2 + 1557 FIG00899379: hypothetical protein - none -
fig|6666666.230104.peg.2152 CDS JNHN01000172.1 91749 90961 -3 - 789 probable lipoprotein YPO2292 - none -
fig|6666666.230104.peg.2153 CDS JNHN01000172.1 95068 91847 -1 - 3222 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.2154 CDS JNHN01000172.1 95964 95077 -3 - 888 Xylanase Xylose utilization
fig|6666666.230104.peg.2155 CDS JNHN01000172.1 97974 95983 -3 - 1992 Oligopeptide transporter, OPT family - none -
fig|6666666.230104.peg.2156 CDS JNHN01000172.1 98552 98157 -2 - 396 FIG00413813: hypothetical protein - none -
fig|6666666.230104.peg.2157 CDS JNHN01000172.1 99357 98644 -3 - 714 Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230104.peg.2158 CDS JNHN01000172.1 99475 100332 1 + 858 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.2159 CDS JNHN01000172.1 100423 101013 1 + 591 membrane protein ykgB - none -
fig|6666666.230104.peg.2160 CDS JNHN01000172.1 101018 102373 2 + 1356 Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4); Mercuric ion reductase (EC 1.16.1.1); PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase Mercuric reductase;
Mercuric reductase;
Mercury resistance operon;
TCA Cycle
fig|6666666.230104.peg.2161 CDS JNHN01000172.1 102476 103645 2 + 1170 Vitamin B12 ABC transporter, B12-binding component BtuF Coenzyme B12 biosynthesis
fig|6666666.230104.peg.2162 CDS JNHN01000172.1 103669 104682 1 + 1014 Vitamin B12 ABC transporter, permease component BtuC Coenzyme B12 biosynthesis
fig|6666666.230104.peg.2163 CDS JNHN01000172.1 104675 105694 2 + 1020 Ferric enterobactin transport ATP-binding protein FepC (TC 3.A.1.14.2) - none -
fig|6666666.230104.peg.2164 CDS JNHN01000172.1 105763 107070 1 + 1308 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230104.peg.2165 CDS JNHN01000172.1 108169 107084 -1 - 1086 Choloylglycine hydrolase (EC 3.5.1.24) Bile hydrolysis
fig|6666666.230104.peg.2166 CDS JNHN01000172.1 108911 108237 -2 - 675 hypothetical protein - none -
fig|6666666.230104.peg.2167 CDS JNHN01000172.1 110803 108908 -1 - 1896 Cobalt-precorrin-6x reductase (EC 1.3.1.54) / Cobalt-precorrin-6 synthase, anaerobic Cobalamin synthesis;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.230104.peg.2168 CDS JNHN01000172.1 112689 110836 -3 - 1854 Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) Cobalamin synthesis;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.230104.peg.2169 CDS JNHN01000172.1 113939 112701 -2 - 1239 Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.230104.peg.2170 CDS JNHN01000172.1 115475 114066 -2 - 1410 Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) Cobalamin synthesis;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.230104.peg.2171 CDS JNHN01000172.1 116474 115575 -2 - 900 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.2172 CDS JNHN01000172.1 117508 116684 -1 - 825 Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230104.peg.2173 CDS JNHN01000172.1 119612 117543 -2 - 2070 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.2174 CDS JNHN01000172.1 120009 119728 -3 - 282 FIG00935708: hypothetical protein - none -
fig|6666666.230104.peg.2175 CDS JNHN01000172.1 120687 120082 -3 - 606 hypothetical transporter PduT for various metalloporphyrins - none -
fig|6666666.230104.peg.2176 CDS JNHN01000172.1 121278 120721 -3 - 558 FIG00402742: hypothetical protein - none -
fig|6666666.230104.peg.2177 CDS JNHN01000172.1 125205 121291 -3 - 3915 CobN/magnesium chelatase family protein - none -
fig|6666666.230104.peg.2178 CDS JNHN01000173.1 5317 4172 -1 - 1146 Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) Polyamine Metabolism
fig|6666666.230104.peg.2179 CDS JNHN01000173.1 7873 5519 -1 - 2355 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.230104.peg.2180 CDS JNHN01000173.1 8054 8638 2 + 585 Superoxide dismutase [Fe] (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.230104.peg.2181 CDS JNHN01000173.1 8805 9413 3 + 609 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Thiamin biosynthesis
fig|6666666.230104.peg.2182 CDS JNHN01000173.1 10317 9433 -3 - 885 two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.2183 CDS JNHN01000173.1 13205 10485 -2 - 2721 Pyruvate,phosphate dikinase (EC 2.7.9.1) Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230104.peg.2184 CDS JNHN01000173.1 13409 14830 2 + 1422 RNA methyltransferase, TrmA family - none -
fig|6666666.230104.peg.2185 CDS JNHN01000173.1 14891 15802 2 + 912 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.230104.peg.2186 CDS JNHN01000173.1 16281 15868 -3 - 414 hypothetical protein - none -
fig|6666666.230104.peg.2187 CDS JNHN01000173.1 16726 16292 -1 - 435 FIG00403019: hypothetical protein - none -
fig|6666666.230104.peg.2188 CDS JNHN01000173.1 17926 16784 -1 - 1143 Protein AraJ precursor L-Arabinose utilization
fig|6666666.230104.peg.2189 CDS JNHN01000173.1 18912 18031 -3 - 882 aldose epimerase family protein - none -
fig|6666666.230104.peg.2190 CDS JNHN01000173.1 19246 18917 -1 - 330 FIG00408424: hypothetical protein - none -
fig|6666666.230104.peg.2191 CDS JNHN01000173.1 20422 19340 -1 - 1083 FIG00415761: hypothetical protein - none -
fig|6666666.230104.peg.2192 CDS JNHN01000173.1 20693 21322 2 + 630 putative DNA-binding protein - none -
fig|6666666.230104.peg.2193 CDS JNHN01000173.1 21350 22561 2 + 1212 Exonuclease SbcD DNA repair, bacterial;
Rad50-Mre11 DNA repair cluster
fig|6666666.230104.peg.2194 CDS JNHN01000173.1 22577 25999 2 + 3423 Exonuclease SbcC DNA repair, bacterial;
Rad50-Mre11 DNA repair cluster
fig|6666666.230104.peg.2195 CDS JNHN01000173.1 26101 26955 1 + 855 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.230104.peg.2196 CDS JNHN01000173.1 26977 28209 1 + 1233 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.230104.peg.2197 CDS JNHN01000173.1 29747 28473 -2 - 1275 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230104.peg.2198 CDS JNHN01000173.1 30391 29765 -1 - 627 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230104.peg.2199 CDS JNHN01000173.1 31143 30505 -3 - 639 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230104.peg.2200 CDS JNHN01000173.1 31837 31148 -1 - 690 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230104.peg.2201 CDS JNHN01000173.1 33021 31852 -3 - 1170 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230104.peg.2202 CDS JNHN01000173.1 34424 33075 -2 - 1350 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230104.peg.2203 CDS JNHN01000173.1 36059 34659 -2 - 1401 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.230104.peg.2204 CDS JNHN01000173.1 36069 36185 3 + 117 hypothetical protein - none -
fig|6666666.230104.peg.2205 CDS JNHN01000173.1 36219 37421 3 + 1203 Outer membrane protein/protective antigen OMA87 - none -
fig|6666666.230104.peg.2206 CDS JNHN01000173.1 37669 38859 1 + 1191 Glycosyl transferase, group 2 family protein - none -
fig|6666666.230104.peg.2207 CDS JNHN01000173.1 38876 41566 2 + 2691 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.2208 CDS JNHN01000173.1 43368 41590 -3 - 1779 Pyruvate carboxylase (EC 6.4.1.1) / Biotin carboxyl carrier protein Fatty Acid Biosynthesis FASII
fig|6666666.230104.peg.2209 CDS JNHN01000173.1 44015 43512 -2 - 504 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.2210 CDS JNHN01000173.1 44289 47192 3 + 2904 FIG00403256: hypothetical protein - none -
fig|6666666.230104.peg.2211 CDS JNHN01000173.1 48007 47381 -1 - 627 FIG00405553: hypothetical protein - none -
fig|6666666.230104.peg.2212 CDS JNHN01000173.1 48160 49254 1 + 1095 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230104.peg.2213 CDS JNHN01000173.1 49367 49513 2 + 147 hypothetical protein - none -
fig|6666666.230104.peg.2214 CDS JNHN01000173.1 49554 52139 3 + 2586 FIG00937290: hypothetical protein - none -
fig|6666666.230104.peg.2215 CDS JNHN01000173.1 52218 53423 3 + 1206 ATPase, AAA family - none -
fig|6666666.230104.peg.2216 CDS JNHN01000173.1 53514 54470 3 + 957 glycerate dehydrogenase - none -
fig|6666666.230104.peg.2217 CDS JNHN01000173.1 54480 55565 3 + 1086 FIG00415799: hypothetical protein - none -
fig|6666666.230104.peg.2218 CDS JNHN01000173.1 59066 55665 -2 - 3402 OmpA-related protein - none -
fig|6666666.230104.peg.2219 CDS JNHN01000173.1 61451 59175 -2 - 2277 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.2220 CDS JNHN01000173.1 61443 61562 3 + 120 hypothetical protein - none -
fig|6666666.230104.peg.2221 CDS JNHN01000173.1 62963 61644 -2 - 1320 Na+/H+ antiporter NhaA type NhaA, NhaD and Sodium-dependent phosphate transporters
fig|6666666.230104.peg.2222 CDS JNHN01000173.1 64784 63003 -2 - 1782 Translation elongation factor LepA Heat shock dnaK gene cluster extended
fig|6666666.230104.peg.2223 CDS JNHN01000174.1 69 1670 3 + 1602 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.2224 CDS JNHN01000174.1 1774 1637 -1 - 138 hypothetical protein - none -
fig|6666666.230104.peg.2225 CDS JNHN01000174.1 1755 3851 3 + 2097 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230104.peg.2226 CDS JNHN01000174.1 4461 3874 -3 - 588 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230104.peg.2227 CDS JNHN01000174.1 4929 4471 -3 - 459 FIG00898413: hypothetical protein - none -
fig|6666666.230104.peg.2228 CDS JNHN01000174.1 5786 5031 -2 - 756 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.230104.peg.2229 CDS JNHN01000174.1 7144 5852 -1 - 1293 FIG00694335: hypothetical protein - none -
fig|6666666.230104.peg.2230 CDS JNHN01000174.1 7676 7134 -2 - 543 FIG00651728: hypothetical protein - none -
fig|6666666.230104.peg.2231 CDS JNHN01000174.1 7647 7835 3 + 189 FIG00411363: hypothetical protein - none -
fig|6666666.230104.peg.2232 CDS JNHN01000174.1 8667 7786 -3 - 882 Peptidase, M23/M37 family - none -
fig|6666666.230104.peg.2233 CDS JNHN01000174.1 8793 8668 -3 - 126 hypothetical protein - none -
fig|6666666.230104.peg.2234 CDS JNHN01000174.1 10988 8925 -2 - 2064 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.230104.peg.2235 CDS JNHN01000174.1 11683 11009 -1 - 675 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster;
Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230104.peg.2236 CDS JNHN01000174.1 12279 11725 -3 - 555 DJ-1/YajL/PfpI superfamily, includes chaperone protein YajL (former ThiJ), parkinsonism-associated protein DJ-1, peptidases PfpI, Hsp31 - none -
fig|6666666.230104.peg.2237 CDS JNHN01000174.1 13112 12294 -2 - 819 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.230104.peg.2238 CDS JNHN01000174.1 13518 13147 -3 - 372 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.230104.peg.2239 CDS JNHN01000174.1 14299 13592 -1 - 708 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.230104.peg.2240 CDS JNHN01000174.1 14991 14308 -3 - 684 Pyridoxine 5@1-phosphate synthase (EC 2.6.99.2) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230104.peg.2241 CDS JNHN01000174.1 15126 15995 3 + 870 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.230104.peg.2242 CDS JNHN01000174.1 16290 16871 3 + 582 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.2243 CDS JNHN01000174.1 16889 17929 2 + 1041 putative anti-sigma factor - none -
fig|6666666.230104.peg.2244 CDS JNHN01000174.1 18148 20310 1 + 2163 FIG00406056: hypothetical protein - none -
fig|6666666.230104.peg.2245 CDS JNHN01000174.1 20358 22421 3 + 2064 Alpha-galactosidase (EC 3.2.1.22) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization
fig|6666666.230104.peg.2246 CDS JNHN01000174.1 22435 24429 1 + 1995 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.2247 CDS JNHN01000174.1 24487 26265 1 + 1779 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.2248 CDS JNHN01000174.1 26262 28982 3 + 2721 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.2249 CDS JNHN01000174.1 28994 29764 2 + 771 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.2250 CDS JNHN01000174.1 29871 32081 3 + 2211 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.2251 CDS JNHN01000174.1 32699 32151 -2 - 549 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.2252 CDS JNHN01000174.1 32847 33872 3 + 1026 putative anti-sigma factor - none -
fig|6666666.230104.peg.2253 CDS JNHN01000174.1 33983 37222 2 + 3240 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.2254 CDS JNHN01000174.1 37244 38860 2 + 1617 FIG00898178: hypothetical protein - none -
fig|6666666.230104.peg.2255 CDS JNHN01000174.1 38985 41537 3 + 2553 Rhamnogalacturonides degradation protein RhiN D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230104.peg.2256 CDS JNHN01000174.1 44912 41619 -2 - 3294 putative Tricorn-like protease - none -
fig|6666666.230104.peg.2257 CDS JNHN01000174.1 45912 44971 -3 - 942 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.230104.peg.2258 CDS JNHN01000174.1 46143 47021 3 + 879 FIG00938717: hypothetical protein - none -
fig|6666666.230104.peg.2259 CDS JNHN01000174.1 47143 48609 1 + 1467 Type I secretion system, outer membrane component LapE - none -
fig|6666666.230104.peg.2260 CDS JNHN01000174.1 48655 49644 1 + 990 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.230104.peg.2261 CDS JNHN01000174.1 49672 50850 1 + 1179 ABC-type multidrug transport system, permease component - none -
fig|6666666.230104.peg.2262 CDS JNHN01000174.1 50850 52088 3 + 1239 ABC-type multidrug transport system, permease component - none -
fig|6666666.230104.peg.2263 CDS JNHN01000174.1 53353 52307 -1 - 1047 Platelet-activating factor acetylhydrolase IB gamma subunit (EC 3.1.1.47) - none -
fig|6666666.230104.peg.2264 CDS JNHN01000174.1 53520 55421 3 + 1902 Thiol:disulfide interchange protein tlpA - none -
fig|6666666.230104.peg.2265 CDS JNHN01000174.1 57024 55486 -3 - 1539 Oxidoreductase, Gfo/Idh/MocA family - none -
fig|6666666.230104.peg.2266 CDS JNHN01000174.1 57081 57236 3 + 156 FIG00416158: hypothetical protein - none -
fig|6666666.230104.peg.2267 CDS JNHN01000174.1 57314 57676 2 + 363 Transcriptional regulator, MecI family - none -
fig|6666666.230104.peg.2268 CDS JNHN01000174.1 57679 59499 1 + 1821 Regulatory sensor-transducer, BlaR1/MecR1 family / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.2269 CDS JNHN01000174.1 60692 59592 -2 - 1101 Septum site-determining protein MinD Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
Septum site-determining cluster Min
fig|6666666.230104.peg.2270 CDS JNHN01000174.1 61525 60767 -1 - 759 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation;
tRNA modification Bacteria
fig|6666666.230104.peg.2271 CDS JNHN01000174.1 62707 61688 -1 - 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.230104.peg.2272 CDS JNHN01000174.1 62976 62761 -3 - 216 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.230104.peg.2273 CDS JNHN01000174.1 63387 62989 -3 - 399 FIG00412189: hypothetical protein - none -
fig|6666666.230104.peg.2274 CDS JNHN01000174.1 64693 63461 -1 - 1233 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.230104.peg.2275 CDS JNHN01000174.1 66065 64698 -2 - 1368 Subtilisin-like serine proteases - none -
fig|6666666.230104.peg.2276 CDS JNHN01000174.1 67190 66096 -2 - 1095 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.230104.peg.2277 CDS JNHN01000174.1 69550 67262 -1 - 2289 Cellulase - none -
fig|6666666.230104.peg.2278 CDS JNHN01000174.1 69822 69664 -3 - 159 hypothetical protein - none -
fig|6666666.230104.peg.2279 CDS JNHN01000174.1 69787 70887 1 + 1101 FIG00411696: hypothetical protein - none -
fig|6666666.230104.peg.2280 CDS JNHN01000174.1 70955 71815 2 + 861 FIG00408272: hypothetical protein - none -
fig|6666666.230104.peg.2281 CDS JNHN01000174.1 72882 71827 -3 - 1056 Nucleoside-diphosphate-sugar epimerases CBSS-296591.1.peg.2330
fig|6666666.230104.peg.2282 CDS JNHN01000174.1 73921 72905 -1 - 1017 Putative phosphohydrolase, Icc family - none -
fig|6666666.230104.peg.2283 CDS JNHN01000174.1 74445 73966 -3 - 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.230104.peg.2284 CDS JNHN01000174.1 75137 74520 -2 - 618 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.230104.peg.2285 CDS JNHN01000174.1 75793 75137 -1 - 657 Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) Oxidative stress
fig|6666666.230104.peg.2286 CDS JNHN01000174.1 75944 76291 2 + 348 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.230104.peg.2287 CDS JNHN01000174.1 77391 76399 -3 - 993 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.230104.peg.2288 CDS JNHN01000174.1 78269 77514 -2 - 756 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.230104.peg.2289 CDS JNHN01000174.1 78906 78520 -3 - 387 SSU ribosomal protein S9p (S16e) - none -
fig|6666666.230104.peg.2290 CDS JNHN01000174.1 79374 78913 -3 - 462 LSU ribosomal protein L13p (L13Ae) - none -
fig|6666666.230104.peg.2291 CDS JNHN01000174.1 80202 79711 -3 - 492 FIG00402847: hypothetical protein - none -
fig|6666666.230104.peg.2292 CDS JNHN01000174.1 81757 80354 -1 - 1404 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn
fig|6666666.230104.peg.2293 CDS JNHN01000174.1 83269 81785 -1 - 1485 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.230104.peg.2294 CDS JNHN01000174.1 84752 83406 -2 - 1347 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.230104.peg.2295 CDS JNHN01000174.1 86205 85645 -3 - 561 Maltose O-acetyltransferase (EC 2.3.1.79) Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.2296 CDS JNHN01000174.1 89561 86334 -2 - 3228 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.230104.peg.2297 CDS JNHN01000174.1 89769 89653 -3 - 117 hypothetical protein - none -
fig|6666666.230104.peg.2298 CDS JNHN01000174.1 90063 89935 -3 - 129 hypothetical protein - none -
fig|6666666.230104.peg.2299 CDS JNHN01000174.1 90203 90847 2 + 645 putative DNA-binding protein - none -
fig|6666666.230104.peg.2300 CDS JNHN01000174.1 90922 92016 1 + 1095 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.230104.peg.2301 CDS JNHN01000174.1 93351 92173 -3 - 1179 Major outer membrane protein OmpA - none -
fig|6666666.230104.peg.2302 CDS JNHN01000174.1 95412 93496 -3 - 1917 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.230104.peg.2303 CDS JNHN01000174.1 95742 95452 -3 - 291 FIG00403378: hypothetical protein - none -
fig|6666666.230104.peg.2304 CDS JNHN01000174.1 97468 95747 -1 - 1722 FIG00937328: hypothetical protein - none -
fig|6666666.230104.peg.2305 CDS JNHN01000174.1 98849 97494 -2 - 1356 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) ECSIG4-SIG7;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.230104.peg.2306 CDS JNHN01000174.1 99720 98872 -3 - 849 FIG00898614: hypothetical protein - none -
fig|6666666.230104.peg.2307 CDS JNHN01000174.1 101340 99778 -3 - 1563 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) ECSIG4-SIG7;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.230104.peg.2308 CDS JNHN01000174.1 102749 101430 -2 - 1320 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.230104.peg.2309 CDS JNHN01000174.1 105191 103008 -2 - 2184 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.230104.peg.2310 CDS JNHN01000174.1 106529 105366 -2 - 1164 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.230104.peg.2311 CDS JNHN01000174.1 107275 106613 -1 - 663 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.230104.peg.2312 CDS JNHN01000174.1 107361 107233 -3 - 129 hypothetical protein - none -
fig|6666666.230104.peg.2313 CDS JNHN01000174.1 108762 107407 -3 - 1356 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.230104.peg.2314 CDS JNHN01000174.1 109237 109485 1 + 249 RNA binding protein - none -
fig|6666666.230104.peg.2315 CDS JNHN01000174.1 110413 109568 -1 - 846 Lipopolysaccharide ABC transporter, ATP-binding protein LptB - none -
fig|6666666.230104.peg.2316 CDS JNHN01000174.1 110491 111234 1 + 744 ABC-type transport system involved in resistance to organic solvents, permease component - none -
fig|6666666.230104.peg.2317 CDS JNHN01000174.1 111231 112001 3 + 771 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230104.peg.2318 CDS JNHN01000174.1 113429 112116 -2 - 1314 GTP-binding protein EngA - none -
fig|6666666.230104.peg.2319 CDS JNHN01000174.1 114360 113479 -3 - 882 GTP-binding protein Era Bacterial Cell Division;
Glycyl-tRNA synthetase containing cluster
fig|6666666.230104.peg.2320 CDS JNHN01000174.1 115450 114446 -1 - 1005 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) - none -
fig|6666666.230104.peg.2321 CDS JNHN01000174.1 116350 115772 -1 - 579 COG1399 protein in cluster with ribosomal protein L32p, Bacteroidetes/Chlorobi subfamily - none -
fig|6666666.230104.peg.2322 CDS JNHN01000174.1 122105 121944 -2 - 162 hypothetical protein - none -
fig|6666666.230104.peg.2323 CDS JNHN01000174.1 122884 122411 -1 - 474 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230104.peg.2324 CDS JNHN01000174.1 123701 123189 -2 - 513 FIG00417660: hypothetical protein - none -
fig|6666666.230104.peg.2325 CDS JNHN01000174.1 125330 123954 -2 - 1377 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.230104.peg.2326 CDS JNHN01000174.1 125958 125323 -3 - 636 hypothetical protein - none -
fig|6666666.230104.peg.2327 CDS JNHN01000174.1 126469 126167 -1 - 303 hypothetical protein - none -
fig|6666666.230104.peg.2328 CDS JNHN01000174.1 127226 126789 -2 - 438 hypothetical protein - none -
fig|6666666.230104.peg.2329 CDS JNHN01000174.1 127380 127267 -3 - 114 hypothetical protein - none -
fig|6666666.230104.peg.2330 CDS JNHN01000174.1 127778 129778 2 + 2001 FIG00415354: hypothetical protein - none -
fig|6666666.230104.peg.2331 CDS JNHN01000174.1 129924 130403 3 + 480 hypothetical protein - none -
fig|6666666.230104.peg.2332 CDS JNHN01000174.1 130400 132634 2 + 2235 Biotin synthase (EC 2.8.1.6) / Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin biosynthesis Experimental
fig|6666666.230104.peg.2333 CDS JNHN01000174.1 132669 133820 3 + 1152 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.230104.peg.2334 CDS JNHN01000174.1 133849 134634 1 + 786 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.230104.peg.2335 CDS JNHN01000174.1 134652 135470 3 + 819 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.230104.peg.2336 CDS JNHN01000174.1 135470 136117 2 + 648 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.230104.peg.2337 CDS JNHN01000174.1 136147 137319 1 + 1173 Glycosyl transferase, family 2 - none -
fig|6666666.230104.peg.2338 CDS JNHN01000174.1 138569 137325 -2 - 1245 ABC transporter, permease protein - none -
fig|6666666.230104.peg.2339 CDS JNHN01000174.1 139877 138678 -2 - 1200 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230104.peg.2340 CDS JNHN01000174.1 140140 141375 1 + 1236 FIG00413399: hypothetical protein - none -
fig|6666666.230104.peg.2341 CDS JNHN01000174.1 143979 141376 -3 - 2604 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.2342 CDS JNHN01000174.1 145320 144073 -3 - 1248 ABC transporter permease - none -
fig|6666666.230104.peg.2343 CDS JNHN01000174.1 146589 145357 -3 - 1233 Macrolide-specific ABC-type efflux carrier (TC 3.A.1.122.1) - none -
fig|6666666.230104.peg.2344 CDS JNHN01000174.1 147843 146596 -3 - 1248 ABC transporter permease - none -
fig|6666666.230104.peg.2345 CDS JNHN01000174.1 149164 147866 -1 - 1299 Macrolide-specific ABC-type efflux carrier (TC 3.A.1.122.1) - none -
fig|6666666.230104.peg.2346 CDS JNHN01000174.1 149840 149217 -2 - 624 FIG00402683: hypothetical protein - none -
fig|6666666.230104.peg.2347 CDS JNHN01000174.1 151114 149882 -1 - 1233 ABC transporter permease - none -
fig|6666666.230104.peg.2348 CDS JNHN01000174.1 152431 151157 -1 - 1275 Macrolide-specific ABC-type efflux carrier (TC 3.A.1.122.1) - none -
fig|6666666.230104.peg.2349 CDS JNHN01000174.1 153151 152486 -1 - 666 ABC transporter ATP-binding protein - none -
fig|6666666.230104.peg.2350 CDS JNHN01000174.1 154606 153311 -1 - 1296 ABC transporter permease - none -
fig|6666666.230104.peg.2351 CDS JNHN01000174.1 155942 154623 -2 - 1320 Macrolide-specific ABC-type efflux carrier (TC 3.A.1.122.1) - none -
fig|6666666.230104.peg.2352 CDS JNHN01000174.1 157186 155939 -1 - 1248 ABC transporter permease - none -
fig|6666666.230104.peg.2353 CDS JNHN01000174.1 158253 157330 -3 - 924 Hemagglutinin - none -
fig|6666666.230104.peg.2354 CDS JNHN01000174.1 158355 158837 3 + 483 Cytidine deaminase (EC 3.5.4.5) Murein hydrolase regulation and cell death;
tRNA modification Bacteria
fig|6666666.230104.peg.2355 CDS JNHN01000174.1 159196 160830 1 + 1635 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230104.peg.2356 CDS JNHN01000174.1 160936 161475 1 + 540 iron-sulfur flavoprotein - none -
fig|6666666.230104.peg.2357 CDS JNHN01000174.1 161508 163004 3 + 1497 Ferredoxin-type protein NapG (periplasmic nitrate reductase) Nitrate and nitrite ammonification
fig|6666666.230104.peg.2358 CDS JNHN01000174.1 163053 164456 3 + 1404 Fe-S oxidoreductase - none -
fig|6666666.230104.peg.2359 CDS JNHN01000174.1 164610 166481 3 + 1872 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.230104.peg.2360 CDS JNHN01000174.1 166496 167005 2 + 510 hypothetical protein - none -
fig|6666666.230104.peg.2361 CDS JNHN01000174.1 168518 167031 -2 - 1488 FIG00416115: hypothetical protein - none -
fig|6666666.230104.peg.2362 CDS JNHN01000174.1 170058 168505 -3 - 1554 MoxR-like ATPase - none -
fig|6666666.230104.peg.2363 CDS JNHN01000174.1 170160 170276 3 + 117 hypothetical protein - none -
fig|6666666.230104.peg.2364 CDS JNHN01000174.1 170903 171730 2 + 828 hypothetical protein - none -
fig|6666666.230104.peg.2365 CDS JNHN01000174.1 171749 172690 2 + 942 hypothetical protein - none -
fig|6666666.230104.peg.2366 CDS JNHN01000174.1 172770 175772 3 + 3003 hypothetical protein - none -
fig|6666666.230104.peg.2367 CDS JNHN01000174.1 175776 175988 3 + 213 hypothetical protein - none -
fig|6666666.230104.peg.2368 CDS JNHN01000174.1 175988 176497 2 + 510 Antirestriction protein ArdA - none -
fig|6666666.230104.peg.2369 CDS JNHN01000174.1 176518 176832 1 + 315 hypothetical protein - none -
fig|6666666.230104.peg.2370 CDS JNHN01000174.1 176845 177213 1 + 369 hypothetical protein - none -
fig|6666666.230104.peg.2371 CDS JNHN01000174.1 177234 177521 3 + 288 hypothetical protein - none -
fig|6666666.230104.peg.2372 CDS JNHN01000174.1 177612 178541 3 + 930 hypothetical protein - none -
fig|6666666.230104.peg.2373 CDS JNHN01000174.1 178579 179166 1 + 588 FIG00897967: hypothetical protein - none -
fig|6666666.230104.peg.2374 CDS JNHN01000174.1 179163 179795 3 + 633 hypothetical protein - none -
fig|6666666.230104.peg.2375 CDS JNHN01000174.1 179848 180006 1 + 159 hypothetical protein - none -
fig|6666666.230104.peg.2376 CDS JNHN01000174.1 180019 181041 1 + 1023 FIG00896987: hypothetical protein - none -
fig|6666666.230104.peg.2377 CDS JNHN01000174.1 181052 181417 2 + 366 hypothetical protein - none -
fig|6666666.230104.peg.2378 CDS JNHN01000174.1 181420 182130 1 + 711 FIG00899242: hypothetical protein - none -
fig|6666666.230104.peg.2379 CDS JNHN01000174.1 182625 182191 -3 - 435 FIG00897117: hypothetical protein - none -
fig|6666666.230104.peg.2380 CDS JNHN01000174.1 182858 183148 2 + 291 FIG00898875: hypothetical protein - none -
fig|6666666.230104.peg.2381 CDS JNHN01000174.1 183530 183658 2 + 129 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230104.peg.2382 CDS JNHN01000174.1 185261 183624 -2 - 1638 Mobile element protein - none -
fig|6666666.230104.peg.2383 CDS JNHN01000174.1 185738 185373 -2 - 366 Mobile element protein - none -
fig|6666666.230104.peg.2384 CDS JNHN01000174.1 186080 185742 -2 - 339 hypothetical protein - none -
fig|6666666.230104.peg.2385 CDS JNHN01000174.1 186209 187066 2 + 858 hypothetical protein - none -
fig|6666666.230104.peg.2386 CDS JNHN01000174.1 187658 187143 -2 - 516 Lysozyme-related protein - none -
fig|6666666.230104.peg.2387 CDS JNHN01000174.1 188178 187672 -3 - 507 Conjugative transposon protein TraQ Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.2388 CDS JNHN01000174.1 188520 188218 -3 - 303 Conjugative transposon protein TraP @ DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230104.peg.2389 CDS JNHN01000174.1 188528 189100 2 + 573 hypothetical protein - none -
fig|6666666.230104.peg.2390 CDS JNHN01000174.1 189669 189097 -3 - 573 Conjugative transposon protein TraO Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.2391 CDS JNHN01000174.1 190655 189672 -2 - 984 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.2392 CDS JNHN01000174.1 191947 190679 -1 - 1269 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.2393 CDS JNHN01000174.1 192236 191940 -2 - 297 hypothetical protein - none -
fig|6666666.230104.peg.2394 CDS JNHN01000174.1 192881 192258 -2 - 624 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.2395 CDS JNHN01000174.1 193909 192905 -1 - 1005 Conjugative transposon protein TraJ Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.2396 CDS JNHN01000174.1 194558 193929 -2 - 630 Conjugative transposon protein TraI Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.2397 CDS JNHN01000174.1 195623 194598 -2 - 1026 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.230104.peg.2398 CDS JNHN01000174.1 198166 195647 -1 - 2520 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.2399 CDS JNHN01000174.1 198495 198163 -3 - 333 Conjugative transposon protein TraF Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.2400 CDS JNHN01000174.1 198793 198497 -1 - 297 Mobile element protein - none -
fig|6666666.230104.peg.2401 CDS JNHN01000174.1 199189 198992 -1 - 198 hypothetical protein - none -
fig|6666666.230104.peg.2402 CDS JNHN01000174.1 199205 199519 2 + 315 hypothetical protein - none -
fig|6666666.230104.peg.2403 CDS JNHN01000174.1 199526 199720 2 + 195 hypothetical protein - none -
fig|6666666.230104.peg.2404 CDS JNHN01000174.1 200130 199801 -3 - 330 hypothetical protein - none -
fig|6666666.230104.peg.2405 CDS JNHN01000174.1 200627 200361 -2 - 267 hypothetical protein - none -
fig|6666666.230104.peg.2406 CDS JNHN01000174.1 201418 200630 -1 - 789 Conjugative transposon protein TraD Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.2407 CDS JNHN01000174.1 201840 201421 -3 - 420 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.2408 CDS JNHN01000174.1 202600 201848 -1 - 753 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.2409 CDS JNHN01000174.1 203209 203667 1 + 459 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.2410 CDS JNHN01000174.1 203669 204922 2 + 1254 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.2411 CDS JNHN01000174.1 204957 205880 3 + 924 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.2412 CDS JNHN01000174.1 206517 208169 3 + 1653 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) Group II intron-associated genes
fig|6666666.230104.peg.2413 CDS JNHN01000174.1 208561 209400 1 + 840 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.2414 CDS JNHN01000174.1 209455 209571 1 + 117 hypothetical protein - none -
fig|6666666.230104.peg.2415 CDS JNHN01000174.1 209618 210160 2 + 543 conserved hypothetical protein - none -
fig|6666666.230104.peg.2416 CDS JNHN01000174.1 210212 210451 2 + 240 hypothetical protein - none -
fig|6666666.230104.peg.2417 CDS JNHN01000174.1 210462 210716 3 + 255 hypothetical protein - none -
fig|6666666.230104.peg.2418 CDS JNHN01000174.1 210728 211225 2 + 498 hypothetical protein - none -
fig|6666666.230104.peg.2419 CDS JNHN01000174.1 211237 211527 1 + 291 hypothetical protein - none -
fig|6666666.230104.peg.2420 CDS JNHN01000174.1 212925 211714 -3 - 1212 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.230104.peg.2421 CDS JNHN01000174.1 213742 213617 -1 - 126 hypothetical protein - none -
fig|6666666.230104.peg.2422 CDS JNHN01000174.1 213917 215677 2 + 1761 FIG00936597: hypothetical protein - none -
fig|6666666.230104.peg.2423 CDS JNHN01000174.1 215726 215986 2 + 261 hypothetical protein - none -
fig|6666666.230104.peg.2424 CDS JNHN01000174.1 216016 218181 1 + 2166 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.230104.peg.2425 CDS JNHN01000174.1 218360 218187 -2 - 174 hypothetical protein - none -
fig|6666666.230104.peg.2426 CDS JNHN01000174.1 218380 218616 1 + 237 hypothetical protein - none -
fig|6666666.230104.peg.2427 CDS JNHN01000174.1 218952 218806 -3 - 147 hypothetical protein - none -
fig|6666666.230104.peg.2428 CDS JNHN01000174.1 219057 219224 3 + 168 hypothetical protein - none -
fig|6666666.230104.peg.2429 CDS JNHN01000174.1 219286 220212 1 + 927 hypothetical protein - none -
fig|6666666.230104.peg.2430 CDS JNHN01000174.1 220187 220438 2 + 252 FIG00408893: hypothetical protein - none -
fig|6666666.230104.peg.2431 CDS JNHN01000174.1 220444 220611 1 + 168 hypothetical protein - none -
fig|6666666.230104.peg.2432 CDS JNHN01000174.1 220650 221558 3 + 909 hypothetical protein - none -
fig|6666666.230104.peg.2433 CDS JNHN01000174.1 221564 222265 2 + 702 hypothetical protein - none -
fig|6666666.230104.peg.2434 CDS JNHN01000174.1 222262 223050 1 + 789 ThiF family protein, ubiquitin-activating enzyme - none -
fig|6666666.230104.peg.2435 CDS JNHN01000174.1 223550 224758 2 + 1209 transposase - none -
fig|6666666.230104.peg.2436 CDS JNHN01000174.1 225221 225757 2 + 537 Capsular polysaccharide transcription antitermination protein, UpxY family - none -
fig|6666666.230104.peg.2437 CDS JNHN01000174.1 225789 226913 3 + 1125 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230104.peg.2438 CDS JNHN01000174.1 226926 227723 3 + 798 Polysaccharide export outer membrane protein - none -
fig|6666666.230104.peg.2439 CDS JNHN01000174.1 227733 230129 3 + 2397 Tyrosine-protein kinase Wzc (EC 2.7.10.2) CBSS-258594.1.peg.3339
fig|6666666.230104.peg.2440 CDS JNHN01000174.1 230186 230839 2 + 654 Protein-tyrosine-phosphatase (EC 3.1.3.48) - none -
fig|6666666.230104.peg.2441 CDS JNHN01000174.1 230811 232190 3 + 1380 hypothetical protein - none -
fig|6666666.230104.peg.2442 CDS JNHN01000174.1 232473 233738 3 + 1266 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.230104.peg.2443 CDS JNHN01000174.1 234507 235115 3 + 609 hypothetical protein - none -
fig|6666666.230104.peg.2444 CDS JNHN01000174.1 235129 236643 1 + 1515 putative flippase - none -
fig|6666666.230104.peg.2445 CDS JNHN01000174.1 236640 237716 3 + 1077 hypothetical protein - none -
fig|6666666.230104.peg.2446 CDS JNHN01000174.1 237713 238654 2 + 942 Polysaccharide polymerization protein - none -
fig|6666666.230104.peg.2447 CDS JNHN01000174.1 238651 239658 1 + 1008 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230104.peg.2448 CDS JNHN01000174.1 239737 240702 1 + 966 conserved hypothetical protein - none -
fig|6666666.230104.peg.2449 CDS JNHN01000174.1 240706 241710 1 + 1005 acyltransferase 3 - none -
fig|6666666.230104.peg.2450 CDS JNHN01000174.1 241688 242740 2 + 1053 hypothetical protein - none -
fig|6666666.230104.peg.2451 CDS JNHN01000174.1 242733 243845 3 + 1113 FIG00896339: hypothetical protein - none -
fig|6666666.230104.peg.2452 CDS JNHN01000174.1 243870 245249 3 + 1380 FIG00897248: hypothetical protein - none -
fig|6666666.230104.peg.2453 CDS JNHN01000174.1 245300 246223 2 + 924 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230104.peg.2454 CDS JNHN01000174.1 246216 247346 3 + 1131 Glycosyl transferase, group 1 CBSS-258594.1.peg.3339
fig|6666666.230104.peg.2455 CDS JNHN01000174.1 247670 247909 2 + 240 acetyltransferase - none -
fig|6666666.230104.peg.2456 CDS JNHN01000174.1 247928 248713 2 + 786 Colanic acid biosynthesis glycosyl transferase WcaE - none -
fig|6666666.230104.peg.2457 CDS JNHN01000174.1 248710 249798 1 + 1089 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) Capsular heptose biosynthesis
fig|6666666.230104.peg.2458 CDS JNHN01000174.1 249798 250739 3 + 942 GDP-L-fucose synthetase (EC 1.1.1.271) Capsular heptose biosynthesis
fig|6666666.230104.peg.2459 CDS JNHN01000174.1 250758 252104 3 + 1347 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) Mannose Metabolism
fig|6666666.230104.peg.2460 CDS JNHN01000174.1 252420 254702 3 + 2283 helicase, putative - none -
fig|6666666.230104.peg.2461 CDS JNHN01000174.1 254929 257220 1 + 2292 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.2462 CDS JNHN01000174.1 257217 258527 3 + 1311 RteB, two-component system response regulator - none -
fig|6666666.230104.peg.2463 CDS JNHN01000174.1 258861 259250 3 + 390 hypothetical protein - none -
fig|6666666.230104.peg.2464 CDS JNHN01000174.1 259466 259783 2 + 318 hypothetical protein - none -
fig|6666666.230104.peg.2465 CDS JNHN01000174.1 259799 260095 2 + 297 hypothetical protein - none -
fig|6666666.230104.peg.2466 CDS JNHN01000174.1 260092 260403 1 + 312 FIG00406484: hypothetical protein - none -
fig|6666666.230104.peg.2467 CDS JNHN01000174.1 261773 260472 -2 - 1302 Transposase - none -
fig|6666666.230104.peg.2468 CDS JNHN01000174.1 263019 261796 -3 - 1224 Tyrosine type site-specific recombinase - none -
fig|6666666.230104.peg.2469 CDS JNHN01000174.1 263301 263164 -3 - 138 hypothetical protein - none -
fig|6666666.230104.peg.2470 CDS JNHN01000174.1 264036 263704 -3 - 333 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.230104.peg.2471 CDS JNHN01000174.1 264284 264036 -2 - 249 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.230104.peg.2472 CDS JNHN01000174.1 264966 264304 -3 - 663 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.230104.peg.2473 CDS JNHN01000174.1 265408 265262 -1 - 147 hypothetical protein - none -
fig|6666666.230104.peg.2474 CDS JNHN01000174.1 269585 265428 -2 - 4158 CRISPR-associated protein, Csn1 family CRISPRs
fig|6666666.230104.peg.2475 CDS JNHN01000174.1 270204 270842 3 + 639 putative DNA-binding protein - none -
fig|6666666.230104.peg.2476 CDS JNHN01000174.1 270948 271754 3 + 807 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.230104.peg.2477 CDS JNHN01000174.1 273787 272045 -1 - 1743 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.230104.peg.2478 CDS JNHN01000174.1 275512 273869 -1 - 1644 Probable dipeptidase (EC 3.4.-.-) - none -
fig|6666666.230104.peg.2479 CDS JNHN01000174.1 277231 275549 -1 - 1683 FIG00407700: hypothetical protein - none -
fig|6666666.230104.peg.2480 CDS JNHN01000174.1 277415 278521 2 + 1107 Alanine dehydrogenase (EC 1.4.1.1) Pyruvate Alanine Serine Interconversions
fig|6666666.230104.peg.2481 CDS JNHN01000174.1 279821 278598 -2 - 1224 Permeases of the major facilitator superfamily - none -
fig|6666666.230104.peg.2482 CDS JNHN01000174.1 280024 281460 1 + 1437 Glutamate decarboxylase (EC 4.1.1.15) - none -
fig|6666666.230104.peg.2483 CDS JNHN01000174.1 281583 282548 3 + 966 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230104.peg.2484 CDS JNHN01000174.1 282646 283401 1 + 756 Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family Potassium homeostasis
fig|6666666.230104.peg.2485 CDS JNHN01000174.1 283526 285091 2 + 1566 Glutamate/gamma-aminobutyrate antiporter - none -
fig|6666666.230104.peg.2486 CDS JNHN01000174.1 286134 285184 -3 - 951 Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.230104.peg.2487 CDS JNHN01000174.1 286854 286213 -3 - 642 FIG00402915: hypothetical protein - none -
fig|6666666.230104.peg.2488 CDS JNHN01000174.1 287481 286924 -3 - 558 FIG00405189: hypothetical protein - none -
fig|6666666.230104.peg.2489 CDS JNHN01000174.1 288601 287501 -1 - 1101 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.2490 CDS JNHN01000174.1 289139 288588 -2 - 552 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.2491 CDS JNHN01000174.1 289951 289247 -1 - 705 FIG00414056: hypothetical protein - none -
fig|6666666.230104.peg.2492 CDS JNHN01000174.1 290668 289958 -1 - 711 FIG00405854: hypothetical protein - none -
fig|6666666.230104.peg.2493 CDS JNHN01000174.1 291743 290895 -2 - 849 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.230104.peg.2494 CDS JNHN01000174.1 292134 291736 -3 - 399 FIG00404066: hypothetical protein - none -
fig|6666666.230104.peg.2495 CDS JNHN01000174.1 292223 292696 2 + 474 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.230104.peg.2496 CDS JNHN01000174.1 295612 292703 -1 - 2910 L-fucose kinase (EC 2.7.1.52) - none -
fig|6666666.230104.peg.2497 CDS JNHN01000174.1 296392 296036 -1 - 357 Transcriptional regulator, MarR family - none -
fig|6666666.230104.peg.2498 CDS JNHN01000174.1 298929 296404 -3 - 2526 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.230104.peg.2499 CDS JNHN01000174.1 300383 299172 -2 - 1212 Clostripain-related protein - none -
fig|6666666.230104.peg.2500 CDS JNHN01000174.1 300801 300403 -3 - 399 FIG00405061: hypothetical protein - none -
fig|6666666.230104.peg.2501 CDS JNHN01000174.1 301784 300924 -2 - 861 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.230104.peg.2502 CDS JNHN01000174.1 303506 301977 -2 - 1530 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.230104.peg.2503 CDS JNHN01000174.1 305176 303854 -1 - 1323 Transglutaminase-like enzymes, putative cysteine proteases - none -
fig|6666666.230104.peg.2504 CDS JNHN01000174.1 306357 305185 -3 - 1173 L-alanine-DL-glutamate epimerase Muconate lactonizing enzyme family;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230104.peg.2505 CDS JNHN01000174.1 307694 306489 -2 - 1206 L-alanyl-gamma-D-glutamyl-L-diamino acid endopeptidase Muconate lactonizing enzyme family
fig|6666666.230104.peg.2506 CDS JNHN01000174.1 308339 309658 2 + 1320 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.230104.peg.2507 CDS JNHN01000174.1 310490 309888 -2 - 603 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.230104.peg.2508 CDS JNHN01000174.1 311537 310842 -2 - 696 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.230104.peg.2509 CDS JNHN01000174.1 312353 311598 -2 - 756 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.230104.peg.2510 CDS JNHN01000174.1 313231 312371 -1 - 861 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.230104.peg.2511 CDS JNHN01000174.1 314428 313244 -1 - 1185 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.230104.peg.2512 CDS JNHN01000174.1 314620 315441 1 + 822 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.230104.peg.2513 CDS JNHN01000174.1 315516 317255 3 + 1740 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.230104.peg.2514 CDS JNHN01000174.1 317260 318672 1 + 1413 TPR-domain containing protein - none -
fig|6666666.230104.peg.2515 CDS JNHN01000174.1 318767 319339 2 + 573 Alkaline phosphatase like protein Phosphate metabolism
fig|6666666.230104.peg.2516 CDS JNHN01000174.1 319930 319430 -1 - 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.230104.peg.2517 CDS JNHN01000174.1 320057 320662 2 + 606 FIG00407667: hypothetical protein - none -
fig|6666666.230104.peg.2518 CDS JNHN01000174.1 321319 320726 -1 - 594 Site-specific recombinase Mpi - none -
fig|6666666.230104.peg.2519 CDS JNHN01000174.1 322790 321549 -2 - 1242 Lipopolysaccharide biosynthesis protein RffA - none -
fig|6666666.230104.peg.2520 CDS JNHN01000174.1 323394 322804 -3 - 591 PhnO protein - none -
fig|6666666.230104.peg.2521 CDS JNHN01000174.1 324012 323404 -3 - 609 Lipid carrier : UDP-N-acetylgalactosaminyltransferase (EC 2.4.1.-) CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria
fig|6666666.230104.peg.2522 CDS JNHN01000174.1 325307 324096 -2 - 1212 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230104.peg.2523 CDS JNHN01000174.1 327186 325315 -3 - 1872 FIG00974126: hypothetical protein - none -
fig|6666666.230104.peg.2524 CDS JNHN01000174.1 329323 327200 -1 - 2124 putatve zinc-binding dehydrogenase - none -
fig|6666666.230104.peg.2525 CDS JNHN01000174.1 330084 329320 -3 - 765 hypothetical protein - none -
fig|6666666.230104.peg.2526 CDS JNHN01000174.1 331454 330414 -2 - 1041 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230104.peg.2527 CDS JNHN01000174.1 332623 331460 -1 - 1164 capsular polysaccharide biosynthesis protein Rhamnose containing glycans
fig|6666666.230104.peg.2528 CDS JNHN01000174.1 333712 332624 -1 - 1089 glycosyl transferase, group 1 family protein - none -
fig|6666666.230104.peg.2529 CDS JNHN01000174.1 335181 333709 -3 - 1473 Lipopolysaccharide biosynthesis protein WzxC - none -
fig|6666666.230104.peg.2530 CDS JNHN01000174.1 336317 335196 -2 - 1122 4-alpha-L-fucosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230104.peg.2531 CDS JNHN01000174.1 337457 336321 -2 - 1137 Lipopolysaccharide biosynthesis protein RffA - none -
fig|6666666.230104.peg.2532 CDS JNHN01000174.1 338618 337470 -2 - 1149 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230104.peg.2533 CDS JNHN01000174.1 339824 338634 -2 - 1191 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.230104.peg.2534 CDS JNHN01000174.1 340317 339889 -3 - 429 UpdZ protein - none -
fig|6666666.230104.peg.2535 CDS JNHN01000174.1 340950 340417 -3 - 534 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230104.peg.2536 CDS JNHN01000174.1 342351 342809 3 + 459 FIG00896819: hypothetical protein - none -
fig|6666666.230104.peg.2537 CDS JNHN01000174.1 342889 343554 1 + 666 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism
fig|6666666.230104.peg.2538 CDS JNHN01000174.1 343573 344550 1 + 978 putative dihydropyrimidine dehydrogenase [NADP+] precursor - none -
fig|6666666.230104.peg.2539 CDS JNHN01000174.1 346549 344645 -1 - 1905 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria
fig|6666666.230104.peg.2540 CDS JNHN01000174.1 348059 346734 -2 - 1326 Predicted ATPase related to phosphate starvation-inducible protein PhoH Phosphate metabolism
fig|6666666.230104.peg.2541 CDS JNHN01000174.1 348273 349481 3 + 1209 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Colicin V and Bacteriocin Production Cluster;
Colicin V and Bacteriocin Production Cluster;
Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.230104.peg.2542 CDS JNHN01000174.1 349832 349449 -2 - 384 Bona fide RidA/YjgF/TdcF/RutC subgroup - none -
fig|6666666.230104.peg.2543 CDS JNHN01000174.1 351753 350050 -3 - 1704 Tetratricopeptide repeat family protein - none -
fig|6666666.230104.peg.2544 CDS JNHN01000174.1 352497 351757 -3 - 741 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.230104.peg.2545 CDS JNHN01000174.1 354196 352526 -1 - 1671 DNA repair protein RecN DNA repair, bacterial
fig|6666666.230104.peg.2546 CDS JNHN01000174.1 355452 354223 -3 - 1230 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.230104.peg.2547 CDS JNHN01000174.1 356223 355453 -3 - 771 DNA Pol III Epsilon Chain - none -
fig|6666666.230104.peg.2548 CDS JNHN01000174.1 357486 356362 -3 - 1125 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.230104.peg.2549 CDS JNHN01000174.1 357674 358042 2 + 369 FIG00937408: hypothetical protein - none -
fig|6666666.230104.peg.2550 CDS JNHN01000174.1 359844 358210 -3 - 1635 FIG00402966: hypothetical protein - none -
fig|6666666.230104.peg.2551 CDS JNHN01000174.1 360684 359917 -3 - 768 Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein Beta-lactamase
fig|6666666.230104.peg.2552 CDS JNHN01000174.1 361741 360755 -1 - 987 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.230104.peg.2553 CDS JNHN01000174.1 362606 361758 -2 - 849 FIG00404031: hypothetical protein - none -
fig|6666666.230104.peg.2554 CDS JNHN01000174.1 363583 362627 -1 - 957 L-threonine 3-dehydrogenase (EC 1.1.1.103) Glycine Biosynthesis;
Threonine degradation
fig|6666666.230104.peg.2555 CDS JNHN01000174.1 363737 364924 2 + 1188 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) Glycine Biosynthesis;
Glycine and Serine Utilization
fig|6666666.230104.peg.2556 CDS JNHN01000174.1 365548 365066 -1 - 483 Ferritin-like protein 2 Iron-sulfur cluster assembly
fig|6666666.230104.peg.2557 CDS JNHN01000174.1 366851 365691 -2 - 1161 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230104.peg.2558 CDS JNHN01000174.1 368324 367005 -2 - 1320 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.230104.peg.2559 CDS JNHN01000174.1 369149 368448 -2 - 702 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.230104.peg.2560 CDS JNHN01000174.1 369784 369179 -1 - 606 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.230104.peg.2561 CDS JNHN01000174.1 370661 369906 -2 - 756 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.230104.peg.2562 CDS JNHN01000174.1 371433 370711 -3 - 723 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis
fig|6666666.230104.peg.2563 CDS JNHN01000174.1 372044 371454 -2 - 591 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.230104.peg.2564 CDS JNHN01000174.1 372991 372134 -1 - 858 Formyltetrahydrofolate deformylase (EC 3.5.1.10) One-carbon metabolism by tetrahydropterines
fig|6666666.230104.peg.2565 CDS JNHN01000174.1 373749 373877 3 + 129 hypothetical protein - none -
fig|6666666.230104.peg.2566 CDS JNHN01000174.1 374233 374093 -1 - 141 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.230104.peg.2567 CDS JNHN01000174.1 374516 374280 -2 - 237 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.230104.peg.2568 CDS JNHN01000174.1 374871 374704 -3 - 168 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230104.peg.2569 CDS JNHN01000174.1 375105 374950 -3 - 156 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230104.peg.2570 CDS JNHN01000174.1 375987 375205 -3 - 783 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.230104.peg.2571 CDS JNHN01000174.1 376823 376032 -2 - 792 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.2572 CDS JNHN01000174.1 378347 377088 -2 - 1260 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.230104.peg.2573 CDS JNHN01000174.1 379369 378395 -1 - 975 MoxR-like ATPases - none -
fig|6666666.230104.peg.2574 CDS JNHN01000174.1 380604 379381 -3 - 1224 FIG00652157: hypothetical protein - none -
fig|6666666.230104.peg.2575 CDS JNHN01000174.1 381215 380601 -2 - 615 FIG00404596: hypothetical protein - none -
fig|6666666.230104.peg.2576 CDS JNHN01000174.1 382169 381225 -2 - 945 FIG00403491: hypothetical protein - none -
fig|6666666.230104.peg.2577 CDS JNHN01000174.1 383112 382150 -3 - 963 FIG00649403: hypothetical protein - none -
fig|6666666.230104.peg.2578 CDS JNHN01000174.1 383213 383938 2 + 726 FIG00652438: hypothetical protein - none -
fig|6666666.230104.peg.2579 CDS JNHN01000174.1 384064 384639 1 + 576 FIG00417994: hypothetical protein - none -
fig|6666666.230104.peg.2580 CDS JNHN01000174.1 385652 384819 -2 - 834 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.230104.peg.2581 CDS JNHN01000174.1 386841 385747 -3 - 1095 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.230104.peg.2582 CDS JNHN01000174.1 387025 387825 1 + 801 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.230104.peg.2583 CDS JNHN01000174.1 389498 387861 -2 - 1638 Hydroxylamine reductase (EC 1.7.-.-) Nitrosative stress
fig|6666666.230104.peg.2584 CDS JNHN01000174.1 389693 390331 2 + 639 Hcp transcriptional regulator HcpR (Crp/Fnr family) Nitrosative stress
fig|6666666.230104.peg.2585 CDS JNHN01000174.1 390384 391073 3 + 690 Hcp transcriptional regulator HcpR (Crp/Fnr family) Nitrosative stress
fig|6666666.230104.peg.2586 CDS JNHN01000174.1 392355 391075 -3 - 1281 FIG00897187: hypothetical protein - none -
fig|6666666.230104.peg.2587 CDS JNHN01000174.1 393154 392363 -1 - 792 Cytochrome c biogenesis protein CcsA - none -
fig|6666666.230104.peg.2588 CDS JNHN01000174.1 394395 393151 -3 - 1245 FIG00896358: hypothetical protein - none -
fig|6666666.230104.peg.2589 CDS JNHN01000174.1 396006 394525 -3 - 1482 Cytochrome c552 precursor (EC 1.7.2.2) Nitrate and nitrite ammonification;
Soluble cytochromes and functionally related electron carriers
fig|6666666.230104.peg.2590 CDS JNHN01000174.1 396687 396199 -3 - 489 Cytochrome c nitrite reductase, small subunit NrfH Nitrate and nitrite ammonification
fig|6666666.230104.peg.2591 CDS JNHN01000174.1 396843 396989 3 + 147 hypothetical protein - none -
fig|6666666.230104.peg.2592 CDS JNHN01000174.1 398167 396986 -1 - 1182 conserved hypothetical protein, putative iron uptake factor - none -
fig|6666666.230104.peg.2593 CDS JNHN01000174.1 399606 398203 -3 - 1404 FIG00897421: hypothetical protein - none -
fig|6666666.230104.peg.2594 CDS JNHN01000174.1 401956 399650 -1 - 2307 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.230104.peg.2595 CDS JNHN01000174.1 401975 402124 2 + 150 hypothetical protein - none -
fig|6666666.230104.peg.2596 CDS JNHN01000174.1 402102 402221 3 + 120 hypothetical protein - none -
fig|6666666.230104.peg.2597 CDS JNHN01000174.1 402321 403601 3 + 1281 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.230104.peg.2598 CDS JNHN01000174.1 404418 403957 -3 - 462 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.230104.peg.2599 CDS JNHN01000174.1 405100 404444 -1 - 657 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230104.peg.2600 CDS JNHN01000174.1 405898 405218 -1 - 681 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.230104.peg.2601 CDS JNHN01000174.1 406521 409754 3 + 3234 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.2602 CDS JNHN01000174.1 409770 411560 3 + 1791 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.2603 CDS JNHN01000174.1 411588 412523 3 + 936 FIG00414000: hypothetical protein - none -
fig|6666666.230104.peg.2604 CDS JNHN01000174.1 412536 413663 3 + 1128 Chitinase (EC 3.2.1.14) - none -
fig|6666666.230104.peg.2605 CDS JNHN01000174.1 413861 415120 2 + 1260 FIG00404901: hypothetical protein - none -
fig|6666666.230104.peg.2606 CDS JNHN01000174.1 416526 415201 -3 - 1326 putative outer membrane protein precursor - none -
fig|6666666.230104.peg.2607 CDS JNHN01000174.1 416761 417762 1 + 1002 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.230104.peg.2608 CDS JNHN01000174.1 417862 418566 1 + 705 Pirin - none -
fig|6666666.230104.peg.2609 CDS JNHN01000174.1 418649 419383 2 + 735 Metal dependent hydrolase (EC 3.-.-.-) - none -
fig|6666666.230104.peg.2610 CDS JNHN01000174.1 419423 420568 2 + 1146 FIG00407312: hypothetical protein - none -
fig|6666666.230104.peg.2611 CDS JNHN01000174.1 420618 420995 3 + 378 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.230104.peg.2612 CDS JNHN01000174.1 421046 421210 2 + 165 FIG00404257: hypothetical protein - none -
fig|6666666.230104.peg.2613 CDS JNHN01000174.1 421207 421944 1 + 738 putative methyltransferase - none -
fig|6666666.230104.peg.2614 CDS JNHN01000174.1 422564 422019 -2 - 546 AhpC/TSA family protein - none -
fig|6666666.230104.peg.2615 CDS JNHN01000174.1 425511 423040 -3 - 2472 Ferrous iron transport protein B - none -
fig|6666666.230104.peg.2616 CDS JNHN01000174.1 425852 427126 2 + 1275 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.230104.peg.2617 CDS JNHN01000174.1 427978 427130 -1 - 849 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.230104.peg.2618 CDS JNHN01000174.1 428256 430313 3 + 2058 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.230104.peg.2619 CDS JNHN01000174.1 430447 431913 1 + 1467 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230104.peg.2620 CDS JNHN01000174.1 432107 433429 2 + 1323 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP)
fig|6666666.230104.peg.2621 CDS JNHN01000174.1 433441 434322 1 + 882 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.230104.peg.2622 CDS JNHN01000174.1 434330 435475 2 + 1146 Capsule biosynthesis protein capA - none -
fig|6666666.230104.peg.2623 CDS JNHN01000174.1 436099 437793 1 + 1695 Fe-S oxidoreductase - none -
fig|6666666.230104.peg.2624 CDS JNHN01000174.1 439339 437855 -1 - 1485 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.230104.peg.2625 CDS JNHN01000174.1 440500 439499 -1 - 1002 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) - none -
fig|6666666.230104.peg.2626 CDS JNHN01000174.1 440882 442720 2 + 1839 FIG00412263: hypothetical protein - none -
fig|6666666.230104.peg.2627 CDS JNHN01000174.1 443391 442759 -3 - 633 two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.2628 CDS JNHN01000174.1 444308 443433 -2 - 876 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.2629 CDS JNHN01000174.1 445169 447397 2 + 2229 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.230104.peg.2630 CDS JNHN01000174.1 447399 448124 3 + 726 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.230104.peg.2631 CDS JNHN01000174.1 450397 448193 -1 - 2205 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.2632 CDS JNHN01000174.1 452890 450428 -1 - 2463 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.2633 CDS JNHN01000174.1 454392 453067 -3 - 1326 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.2634 CDS JNHN01000174.1 454941 454393 -3 - 549 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.2635 CDS JNHN01000174.1 455138 455827 2 + 690 FIG00406312: hypothetical protein - none -
fig|6666666.230104.peg.2636 CDS JNHN01000174.1 458437 455915 -1 - 2523 Beta-mannosidase (EC 3.2.1.25) Mannose Metabolism
fig|6666666.230104.peg.2637 CDS JNHN01000174.1 460071 459115 -3 - 957 ABC-type transport, permease protein - none -
fig|6666666.230104.peg.2638 CDS JNHN01000174.1 460807 460064 -1 - 744 ABC-type multidrug transport system, ATPase component - none -
fig|6666666.230104.peg.2639 CDS JNHN01000174.1 461955 460810 -3 - 1146 S-layer domain - none -
fig|6666666.230104.peg.2640 CDS JNHN01000174.1 462144 463199 3 + 1056 FIG00413549: hypothetical protein - none -
fig|6666666.230104.peg.2641 CDS JNHN01000174.1 464315 463206 -2 - 1110 Dienelactone hydrolase and related enzymes - none -
fig|6666666.230104.peg.2642 CDS JNHN01000174.1 464848 464312 -1 - 537 Flavodoxin Flavodoxin
fig|6666666.230104.peg.2643 CDS JNHN01000174.1 465257 467794 2 + 2538 Recombination inhibitory protein MutS2 DNA repair, bacterial MutL-MutS system
fig|6666666.230104.peg.2644 CDS JNHN01000174.1 467851 469062 1 + 1212 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions;
Pyruvate Alanine Serine Interconversions
fig|6666666.230104.peg.2645 CDS JNHN01000174.1 469627 469145 -1 - 483 FIG00404078: hypothetical protein - none -
fig|6666666.230104.peg.2646 CDS JNHN01000174.1 470125 469685 -1 - 441 putative periplasmic protein - none -
fig|6666666.230104.peg.2647 CDS JNHN01000174.1 471507 470218 -3 - 1290 two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.2648 CDS JNHN01000174.1 472181 471504 -2 - 678 DNA-binding response regulator - none -
fig|6666666.230104.peg.2649 CDS JNHN01000174.1 472779 472231 -3 - 549 FIG00406732: hypothetical protein - none -
fig|6666666.230104.peg.2650 CDS JNHN01000174.1 473292 472840 -3 - 453 FIG00414849: hypothetical protein - none -
fig|6666666.230104.peg.2651 CDS JNHN01000174.1 473653 473426 -1 - 228 FIG00408671: hypothetical protein - none -
fig|6666666.230104.peg.2652 CDS JNHN01000174.1 473675 473788 2 + 114 hypothetical protein - none -
fig|6666666.230104.peg.2653 CDS JNHN01000174.1 474259 473780 -1 - 480 DNA-binding protein, histone-like family - none -
fig|6666666.230104.peg.2654 CDS JNHN01000174.1 474660 474475 -3 - 186 FIG00402717: hypothetical protein - none -
fig|6666666.230104.peg.2655 CDS JNHN01000174.1 475823 475203 -2 - 621 putative DNA-binding protein - none -
fig|6666666.230104.peg.2656 CDS JNHN01000174.1 476117 477625 2 + 1509 FIG00409117: hypothetical protein - none -
fig|6666666.230104.peg.2657 CDS JNHN01000174.1 478363 477677 -1 - 687 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.230104.peg.2658 CDS JNHN01000174.1 480198 478369 -3 - 1830 Potassium uptake protein, integral membrane component, KtrB - none -
fig|6666666.230104.peg.2659 CDS JNHN01000174.1 480332 481699 2 + 1368 Tryptophan synthase beta chain like (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.230104.peg.2660 CDS JNHN01000174.1 483294 481696 -3 - 1599 Voltage-gated chloride channel family protein - none -
fig|6666666.230104.peg.2661 CDS JNHN01000174.1 483543 483367 -3 - 177 FIG00405231: hypothetical protein - none -
fig|6666666.230104.peg.2662 CDS JNHN01000174.1 485207 483663 -2 - 1545 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.2663 CDS JNHN01000174.1 486070 485213 -1 - 858 putative anti-sigma factor - none -
fig|6666666.230104.peg.2664 CDS JNHN01000174.1 486621 486070 -3 - 552 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.2665 CDS JNHN01000174.1 487935 486673 -3 - 1263 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.230104.peg.2666 CDS JNHN01000174.1 489197 488169 -2 - 1029 Vitamin B12 ABC transporter, permease component BtuC Coenzyme B12 biosynthesis
fig|6666666.230104.peg.2667 CDS JNHN01000174.1 490412 489279 -2 - 1134 Vitamin B12 ABC transporter, B12-binding component BtuF Coenzyme B12 biosynthesis
fig|6666666.230104.peg.2668 CDS JNHN01000174.1 491518 490418 -1 - 1101 FIG00897452: hypothetical protein - none -
fig|6666666.230104.peg.2669 CDS JNHN01000174.1 493623 491572 -3 - 2052 Outer membrane vitamin B12 receptor BtuB Coenzyme B12 biosynthesis
fig|6666666.230104.peg.2670 CDS JNHN01000174.1 494096 495178 2 + 1083 Haloacid dehalogenase-like hydrolase - none -
fig|6666666.230104.peg.2671 CDS JNHN01000174.1 495313 495858 1 + 546 ATP-dependent DNA helicase - none -
fig|6666666.230104.peg.2672 CDS JNHN01000174.1 496431 496267 -3 - 165 hypothetical protein - none -
fig|6666666.230104.peg.2673 CDS JNHN01000174.1 496390 501138 1 + 4749 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.230104.peg.2674 CDS JNHN01000174.1 501199 502752 1 + 1554 ATP-dependent DNA helicase - none -
fig|6666666.230104.peg.2675 CDS JNHN01000174.1 502859 503467 2 + 609 FIG00417751: hypothetical protein - none -
fig|6666666.230104.peg.2676 CDS JNHN01000174.1 503622 504155 3 + 534 Mobile element protein - none -
fig|6666666.230104.peg.2677 CDS JNHN01000174.1 504200 504331 2 + 132 hypothetical protein - none -
fig|6666666.230104.peg.2678 CDS JNHN01000174.1 504343 504561 1 + 219 Mobile element protein - none -
fig|6666666.230104.peg.2679 CDS JNHN01000174.1 507569 504720 -2 - 2850 helicase (Snf2/Rad54 family) - none -
fig|6666666.230104.peg.2680 CDS JNHN01000174.1 509919 507571 -3 - 2349 hypothetical protein - none -
fig|6666666.230104.peg.2681 CDS JNHN01000174.1 511830 509971 -3 - 1860 hypothetical protein - none -
fig|6666666.230104.peg.2682 CDS JNHN01000174.1 512541 511843 -3 - 699 hypothetical protein - none -
fig|6666666.230104.peg.2683 CDS JNHN01000174.1 514031 512538 -2 - 1494 Golgi autoantigen, golgin subfamily A member 4 - none -
fig|6666666.230104.peg.2684 CDS JNHN01000174.1 514693 516585 1 + 1893 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.230104.peg.2685 CDS JNHN01000174.1 516582 517985 3 + 1404 type I restriction-modification system, S subunit, putative - none -
fig|6666666.230104.peg.2686 CDS JNHN01000174.1 518008 520014 1 + 2007 hypothetical protein - none -
fig|6666666.230104.peg.2687 CDS JNHN01000174.1 520026 520697 3 + 672 hypothetical protein - none -
fig|6666666.230104.peg.2688 CDS JNHN01000174.1 520694 523429 2 + 2736 hypothetical protein - none -
fig|6666666.230104.peg.2689 CDS JNHN01000174.1 523446 527573 3 + 4128 protein kinase, putative - none -
fig|6666666.230104.peg.2690 CDS JNHN01000174.1 527578 529140 1 + 1563 hypothetical protein - none -
fig|6666666.230104.peg.2691 CDS JNHN01000174.1 529140 534590 3 + 5451 hypothetical protein - none -
fig|6666666.230104.peg.2692 CDS JNHN01000174.1 534590 535276 2 + 687 Protein serine/threonine phosphatase PrpC, regulation of stationary phase Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.230104.peg.2693 CDS JNHN01000174.1 535278 535571 3 + 294 hypothetical protein - none -
fig|6666666.230104.peg.2694 CDS JNHN01000174.1 536335 536222 -1 - 114 hypothetical protein - none -
fig|6666666.230104.peg.2695 CDS JNHN01000174.1 537768 536875 -3 - 894 Mobilization protein BmgA - none -
fig|6666666.230104.peg.2696 CDS JNHN01000174.1 538138 537752 -1 - 387 conserved hypothetical protein - none -
fig|6666666.230104.peg.2697 CDS JNHN01000174.1 540027 538222 -3 - 1806 hypothetical protein - none -
fig|6666666.230104.peg.2698 CDS JNHN01000174.1 540577 539978 -1 - 600 hypothetical protein - none -
fig|6666666.230104.peg.2699 CDS JNHN01000174.1 540927 540574 -3 - 354 hypothetical protein - none -
fig|6666666.230104.peg.2700 CDS JNHN01000174.1 542504 541242 -2 - 1263 integrase - none -
fig|6666666.230104.peg.2701 CDS JNHN01000174.1 542728 542501 -1 - 228 putative transposase - none -
fig|6666666.230104.peg.2702 CDS JNHN01000174.1 545169 543250 -3 - 1920 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.230104.peg.2703 CDS JNHN01000174.1 545609 547015 2 + 1407 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230104.peg.2704 CDS JNHN01000174.1 547078 547644 1 + 567 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230104.peg.2705 CDS JNHN01000174.1 548517 547726 -3 - 792 FIG00403782: hypothetical protein - none -
fig|6666666.230104.peg.2706 CDS JNHN01000174.1 548713 549906 1 + 1194 Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) Polyamine Metabolism
fig|6666666.230104.peg.2707 CDS JNHN01000174.1 549959 550405 2 + 447 Thiol peroxidase, Bcp-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.230104.peg.2708 CDS JNHN01000174.1 550424 551461 2 + 1038 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.230104.peg.2709 CDS JNHN01000174.1 552239 551529 -2 - 711 FIG00412668: hypothetical protein - none -
fig|6666666.230104.peg.2710 CDS JNHN01000174.1 552770 552246 -2 - 525 FIG00402774: hypothetical protein - none -
fig|6666666.230104.peg.2711 CDS JNHN01000174.1 553266 552751 -3 - 516 putative RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.2712 CDS JNHN01000174.1 553740 553396 -3 - 345 FIG00417241: hypothetical protein - none -
fig|6666666.230104.peg.2713 CDS JNHN01000174.1 553850 554488 2 + 639 FIG00417513: hypothetical protein - none -
fig|6666666.230104.peg.2714 CDS JNHN01000174.1 555812 554790 -2 - 1023 Putative membrane protein YeiH - none -
fig|6666666.230104.peg.2715 CDS JNHN01000174.1 556813 555926 -1 - 888 LysR family transcriptional regulator YeiE LysR-family proteins in Escherichia coli
fig|6666666.230104.peg.2716 CDS JNHN01000174.1 557424 556828 -3 - 597 FIG00402765: hypothetical protein - none -
fig|6666666.230104.peg.2717 CDS JNHN01000174.1 557968 560562 1 + 2595 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.230104.peg.2718 CDS JNHN01000174.1 561079 560648 -1 - 432 FIG00937286: hypothetical protein - none -
fig|6666666.230104.peg.2719 CDS JNHN01000174.1 561795 561196 -3 - 600 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.230104.peg.2720 CDS JNHN01000174.1 562801 561785 -1 - 1017 FIG00935560: hypothetical protein - none -
fig|6666666.230104.peg.2721 CDS JNHN01000174.1 563143 562817 -1 - 327 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.230104.peg.2722 CDS JNHN01000174.1 564117 563191 -3 - 927 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.230104.peg.2723 CDS JNHN01000174.1 564337 564744 1 + 408 FIG00897961: hypothetical protein - none -
fig|6666666.230104.peg.2724 CDS JNHN01000174.1 564883 565473 1 + 591 LSU ribosomal protein L25p - none -
fig|6666666.230104.peg.2725 CDS JNHN01000174.1 565735 566298 1 + 564 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Translation termination factors bacterial
fig|6666666.230104.peg.2726 CDS JNHN01000174.1 566295 566714 3 + 420 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.230104.peg.2727 CDS JNHN01000174.1 566730 567716 3 + 987 Oxidoreductase - none -
fig|6666666.230104.peg.2728 CDS JNHN01000174.1 570008 567738 -2 - 2271 POTASSIUM/PROTON ANTIPORTER ROSB Potassium homeostasis
fig|6666666.230104.peg.2729 CDS JNHN01000174.1 571333 570185 -1 - 1149 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis;
Histidine Biosynthesis
fig|6666666.230104.peg.2730 CDS JNHN01000174.1 572518 571478 -1 - 1041 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.230104.peg.2731 CDS JNHN01000174.1 573883 572585 -1 - 1299 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.230104.peg.2732 CDS JNHN01000174.1 574936 574085 -1 - 852 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.230104.peg.2733 CDS JNHN01000174.1 575856 575299 -3 - 558 FIG00404105: hypothetical protein - none -
fig|6666666.230104.peg.2734 CDS JNHN01000174.1 575969 577054 2 + 1086 FIG00417980: hypothetical protein - none -
fig|6666666.230104.peg.2735 CDS JNHN01000174.1 577743 577081 -3 - 663 FIG00403349: hypothetical protein - none -
fig|6666666.230104.peg.2736 CDS JNHN01000174.1 578674 577970 -1 - 705 Chloramphenicol acetyltransferase (EC 2.3.1.28) - none -
fig|6666666.230104.peg.2737 CDS JNHN01000174.1 580725 578692 -3 - 2034 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.230104.peg.2738 CDS JNHN01000174.1 581051 580743 -2 - 309 Dabb - none -
fig|6666666.230104.peg.2739 CDS JNHN01000174.1 581154 581765 3 + 612 Uridine kinase (EC 2.7.1.48) - none -
fig|6666666.230104.peg.2740 CDS JNHN01000174.1 581821 583242 1 + 1422 Transglycosylase - none -
fig|6666666.230104.peg.2741 CDS JNHN01000174.1 586048 583283 -1 - 2766 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Methionine Biosynthesis
fig|6666666.230104.peg.2742 CDS JNHN01000174.1 586502 586050 -2 - 453 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.230104.peg.2743 CDS JNHN01000174.1 587083 586511 -1 - 573 FIG00402761: hypothetical protein - none -
fig|6666666.230104.peg.2744 CDS JNHN01000174.1 588011 587091 -2 - 921 hypothetical protein - none -
fig|6666666.230104.peg.2745 CDS JNHN01000174.1 589231 588056 -1 - 1176 FIG00411469: hypothetical protein - none -
fig|6666666.230104.peg.2746 CDS JNHN01000174.1 589677 589255 -3 - 423 hypothetical protein - none -
fig|6666666.230104.peg.2747 CDS JNHN01000174.1 591515 589821 -2 - 1695 TPR-repeat-containing protein - none -
fig|6666666.230104.peg.2748 CDS JNHN01000174.1 592098 591601 -3 - 498 FIG00939540: hypothetical protein - none -
fig|6666666.230104.peg.2749 CDS JNHN01000174.1 592543 593244 1 + 702 NifU-related domain containing protein - none -
fig|6666666.230104.peg.2750 CDS JNHN01000174.1 593263 594273 1 + 1011 no significant homology. - none -
fig|6666666.230104.peg.2751 CDS JNHN01000174.1 595370 594333 -2 - 1038 Threonine dehydrogenase and related Zn-dependent dehydrogenases Threonine degradation
fig|6666666.230104.peg.2752 CDS JNHN01000174.1 596195 595398 -2 - 798 putative rRNA methylase - none -
fig|6666666.230104.peg.2753 CDS JNHN01000174.1 598934 596247 -2 - 2688 FIG00898139: hypothetical protein - none -
fig|6666666.230104.peg.2754 CDS JNHN01000174.1 599433 599020 -3 - 414 FIG00405916: hypothetical protein - none -
fig|6666666.230104.peg.2755 CDS JNHN01000174.1 601386 599461 -3 - 1926 Probable outer membrane receptor protein - none -
fig|6666666.230104.peg.2756 CDS JNHN01000174.1 601402 601527 1 + 126 hypothetical protein - none -
fig|6666666.230104.peg.2757 CDS JNHN01000174.1 602435 601524 -2 - 912 FIG00410852: hypothetical protein - none -
fig|6666666.230104.peg.2758 CDS JNHN01000174.1 603110 602502 -2 - 609 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.230104.peg.2759 CDS JNHN01000174.1 603894 603160 -3 - 735 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230104.peg.2760 CDS JNHN01000174.1 603981 604121 3 + 141 hypothetical protein - none -
fig|6666666.230104.peg.2761 CDS JNHN01000174.1 605838 604201 -3 - 1638 FIG00413372: hypothetical protein - none -
fig|6666666.230104.peg.2762 CDS JNHN01000174.1 606984 605851 -3 - 1134 FIG00405618: hypothetical protein - none -
fig|6666666.230104.peg.2763 CDS JNHN01000174.1 608154 606997 -3 - 1158 FIG00407786: hypothetical protein - none -
fig|6666666.230104.peg.2764 CDS JNHN01000174.1 610899 608161 -3 - 2739 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.230104.peg.2765 CDS JNHN01000174.1 611533 610901 -1 - 633 FIG00409790: hypothetical protein - none -
fig|6666666.230104.peg.2766 CDS JNHN01000174.1 612199 611825 -1 - 375 FIG00402998: hypothetical protein - none -
fig|6666666.230104.peg.2767 CDS JNHN01000174.1 613343 612237 -2 - 1107 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.230104.peg.2768 CDS JNHN01000174.1 613650 613375 -3 - 276 conserved hypothetical protein, putative membrane protein - none -
fig|6666666.230104.peg.2769 CDS JNHN01000174.1 613792 613908 1 + 117 hypothetical protein - none -
fig|6666666.230104.peg.2770 CDS JNHN01000174.1 613920 615860 3 + 1941 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.230104.peg.2771 CDS JNHN01000174.1 615866 616300 2 + 435 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress
fig|6666666.230104.peg.2772 CDS JNHN01000174.1 616372 618012 1 + 1641 FIG00409153: hypothetical protein - none -
fig|6666666.230104.peg.2773 CDS JNHN01000174.1 618061 618891 1 + 831 3-demethylubiquinone-9 3-methyltransferase - none -
fig|6666666.230104.peg.2774 CDS JNHN01000174.1 620385 620263 -3 - 123 hypothetical protein - none -
fig|6666666.230104.peg.2775 CDS JNHN01000174.1 620997 623825 3 + 2829 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.2776 CDS JNHN01000174.1 623927 625054 2 + 1128 FIG00411245: hypothetical protein - none -
fig|6666666.230104.peg.2777 CDS JNHN01000174.1 625116 626174 3 + 1059 FIG00405120: hypothetical protein - none -
fig|6666666.230104.peg.2778 CDS JNHN01000174.1 626409 626182 -3 - 228 FIG00405150: hypothetical protein - none -
fig|6666666.230104.peg.2779 CDS JNHN01000174.1 627946 626555 -1 - 1392 Putative oxalate:formate antiporter - none -
fig|6666666.230104.peg.2780 CDS JNHN01000174.1 628089 627970 -3 - 120 hypothetical protein - none -
fig|6666666.230104.peg.2781 CDS JNHN01000174.1 628474 628100 -1 - 375 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915;
Murein hydrolase regulation and cell death
fig|6666666.230104.peg.2782 CDS JNHN01000174.1 629252 628479 -2 - 774 FIG00936113: hypothetical protein - none -
fig|6666666.230104.peg.2783 CDS JNHN01000174.1 629781 629257 -3 - 525 FIG00936439: hypothetical protein - none -
fig|6666666.230104.peg.2784 CDS JNHN01000174.1 631018 629768 -1 - 1251 Transcriptional regulator - none -
fig|6666666.230104.peg.2785 CDS JNHN01000174.1 632117 631020 -2 - 1098 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) ECSIG4-SIG7;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230104.peg.2786 CDS JNHN01000174.1 633178 632123 -1 - 1056 FIG00936241: hypothetical protein - none -
fig|6666666.230104.peg.2787 CDS JNHN01000174.1 634289 633249 -2 - 1041 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.230104.peg.2788 CDS JNHN01000174.1 634426 634301 -1 - 126 hypothetical protein - none -
fig|6666666.230104.peg.2789 CDS JNHN01000174.1 636581 634443 -2 - 2139 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Queuosine-Archaeosine Biosynthesis
fig|6666666.230104.peg.2790 CDS JNHN01000174.1 637960 636704 -1 - 1257 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.230104.peg.2791 CDS JNHN01000174.1 638591 637965 -2 - 627 FIG00935793: hypothetical protein - none -
fig|6666666.230104.peg.2792 CDS JNHN01000174.1 639921 638596 -3 - 1326 TPR domain protein - none -
fig|6666666.230104.peg.2793 CDS JNHN01000174.1 641230 639968 -1 - 1263 putative outer membrane protein - none -
fig|6666666.230104.peg.2794 CDS JNHN01000174.1 641948 641217 -2 - 732 Pantothenate kinase type III, CoaX-like (EC 2.7.1.33) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.230104.peg.2795 CDS JNHN01000174.1 642079 641963 -1 - 117 hypothetical protein - none -
fig|6666666.230104.peg.2796 CDS JNHN01000174.1 642526 643674 1 + 1149 FIG00937571: hypothetical protein - none -
fig|6666666.230104.peg.2797 CDS JNHN01000174.1 643674 645242 3 + 1569 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.230104.peg.2798 CDS JNHN01000174.1 645340 648675 1 + 3336 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.230104.peg.2799 CDS JNHN01000174.1 648846 649946 3 + 1101 FIG00403450: hypothetical protein - none -
fig|6666666.230104.peg.2800 CDS JNHN01000174.1 650013 650459 3 + 447 FIG00405539: hypothetical protein - none -
fig|6666666.230104.peg.2801 CDS JNHN01000174.1 653568 650566 -3 - 3003 Gluconolactonase (EC 3.1.1.17) - none -
fig|6666666.230104.peg.2802 CDS JNHN01000174.1 656612 653598 -2 - 3015 Gluconolactonase (EC 3.1.1.17) - none -
fig|6666666.230104.peg.2803 CDS JNHN01000174.1 657400 656684 -1 - 717 FIG00414464: hypothetical protein - none -
fig|6666666.230104.peg.2804 CDS JNHN01000174.1 659417 657426 -2 - 1992 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.2805 CDS JNHN01000174.1 662813 659430 -2 - 3384 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.230104.peg.2806 CDS JNHN01000174.1 664080 663067 -3 - 1014 putative anti-sigma factor - none -
fig|6666666.230104.peg.2807 CDS JNHN01000174.1 664218 664796 3 + 579 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.2808 CDS JNHN01000174.1 665174 665668 2 + 495 FIG00897771: hypothetical protein - none -
fig|6666666.230104.peg.2809 CDS JNHN01000174.1 665665 666594 1 + 930 FIG00897508: hypothetical protein - none -
fig|6666666.230104.peg.2810 CDS JNHN01000174.1 666600 668372 3 + 1773 glycosyl hydrolase, family 9 - none -
fig|6666666.230104.peg.2811 CDS JNHN01000174.1 668372 669019 2 + 648 glycosyl hydrolase, family 9 - none -
fig|6666666.230104.peg.2812 CDS JNHN01000174.1 671587 669098 -1 - 2490 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.230104.peg.2813 CDS JNHN01000174.1 671929 672894 1 + 966 FIG00402964: hypothetical protein - none -
fig|6666666.230104.peg.2814 CDS JNHN01000174.1 672927 673727 3 + 801 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.230104.peg.2815 CDS JNHN01000174.1 674287 673814 -1 - 474 FIG00407145: hypothetical protein - none -
fig|6666666.230104.peg.2816 CDS JNHN01000174.1 674678 674313 -2 - 366 FIG00403631: hypothetical protein - none -
fig|6666666.230104.peg.2817 CDS JNHN01000174.1 675280 674726 -1 - 555 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.2818 CDS JNHN01000174.1 676171 675335 -1 - 837 Ribonuclease Z (EC 3.1.26.11) tRNA processing
fig|6666666.230104.peg.2819 CDS JNHN01000174.1 677066 676284 -2 - 783 FIG00412997: hypothetical protein - none -
fig|6666666.230104.peg.2820 CDS JNHN01000174.1 679047 677251 -3 - 1797 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster
fig|6666666.230104.peg.2821 CDS JNHN01000174.1 679244 680065 2 + 822 Probable lipase (EC 3.1.1.1) - none -
fig|6666666.230104.peg.2822 CDS JNHN01000174.1 680899 680069 -1 - 831 Pantothenate kinase type II, eukaryotic (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.230104.peg.2823 CDS JNHN01000174.1 683317 681059 -1 - 2259 FIG00406556: hypothetical protein - none -
fig|6666666.230104.peg.2824 CDS JNHN01000174.1 683797 685986 1 + 2190 Glutamine synthetase type III, GlnN (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.230104.peg.2825 CDS JNHN01000174.1 686172 686873 3 + 702 transcriptional regulator, Crp/Fnr family Oxidative stress
fig|6666666.230104.peg.2826 CDS JNHN01000174.1 687907 686957 -1 - 951 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.230104.peg.2827 CDS JNHN01000174.1 688595 687945 -2 - 651 FIG00938215: hypothetical protein - none -
fig|6666666.230104.peg.2828 CDS JNHN01000174.1 691103 688599 -2 - 2505 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.230104.peg.2829 CDS JNHN01000174.1 691986 691375 -3 - 612 FIG00416553: hypothetical protein - none -
fig|6666666.230104.peg.2830 CDS JNHN01000174.1 692566 692270 -1 - 297 hypothetical protein - none -
fig|6666666.230104.peg.2831 CDS JNHN01000174.1 692913 692632 -3 - 282 hypothetical protein - none -
fig|6666666.230104.peg.2832 CDS JNHN01000174.1 693472 692897 -1 - 576 hypothetical protein - none -
fig|6666666.230104.peg.2833 CDS JNHN01000174.1 695192 693612 -2 - 1581 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.230104.peg.2834 CDS JNHN01000174.1 695394 698213 3 + 2820 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.2835 CDS JNHN01000174.1 698310 700400 3 + 2091 putative helicase - none -
fig|6666666.230104.peg.2836 CDS JNHN01000174.1 700465 701019 1 + 555 FIG00898259: hypothetical protein - none -
fig|6666666.230104.peg.2837 CDS JNHN01000174.1 701023 701646 1 + 624 3@1-5@1 exonuclease domain protein - none -
fig|6666666.230104.peg.2838 CDS JNHN01000174.1 701686 702867 1 + 1182 LSU m5C1962 methyltransferase RlmI RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.230104.peg.2839 CDS JNHN01000174.1 703182 704438 3 + 1257 Nucleoside permease NupG - none -
fig|6666666.230104.peg.2840 CDS JNHN01000174.1 704465 705049 2 + 585 FIG00402727: hypothetical protein - none -
fig|6666666.230104.peg.2841 CDS JNHN01000174.1 705051 705749 3 + 699 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.230104.peg.2842 CDS JNHN01000174.1 705772 707325 1 + 1554 FIG00405862: hypothetical protein - none -
fig|6666666.230104.peg.2843 CDS JNHN01000174.1 707396 708004 2 + 609 ABC transporter ATP-binding protein - none -
fig|6666666.230104.peg.2844 CDS JNHN01000174.1 708016 709221 1 + 1206 FIG00936964: hypothetical protein - none -
fig|6666666.230104.peg.2845 CDS JNHN01000174.1 710514 709300 -3 - 1215 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230104.peg.2846 CDS JNHN01000174.1 712069 710528 -1 - 1542 Beta-xylosidase (EC 3.2.1.37) Xylose utilization
fig|6666666.230104.peg.2847 CDS JNHN01000174.1 712052 712198 2 + 147 hypothetical protein - none -
fig|6666666.230104.peg.2848 CDS JNHN01000174.1 714185 712242 -2 - 1944 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.2849 CDS JNHN01000174.1 715338 714247 -3 - 1092 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.230104.peg.2850 CDS JNHN01000174.1 717264 715339 -3 - 1926 Putative glycosyl hydrolase of unknown function (DUF1680) - none -
fig|6666666.230104.peg.2851 CDS JNHN01000174.1 718856 717261 -2 - 1596 FIG00413299: hypothetical protein - none -
fig|6666666.230104.peg.2852 CDS JNHN01000174.1 718973 719101 2 + 129 hypothetical protein - none -
fig|6666666.230104.peg.2853 CDS JNHN01000174.1 720491 719088 -2 - 1404 COG5434 Endopygalactorunase - none -
fig|6666666.230104.peg.2854 CDS JNHN01000174.1 720609 722078 3 + 1470 COG5434 Endopygalactorunase - none -
fig|6666666.230104.peg.2855 CDS JNHN01000174.1 722577 722068 -3 - 510 FIG00412136: hypothetical protein - none -
fig|6666666.230104.peg.2856 CDS JNHN01000174.1 723058 722594 -1 - 465 FIG00417169: hypothetical protein - none -
fig|6666666.230104.peg.2857 CDS JNHN01000174.1 723639 723508 -3 - 132 hypothetical protein - none -
fig|6666666.230104.peg.2858 CDS JNHN01000174.1 724943 723729 -2 - 1215 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230104.peg.2859 CDS JNHN01000174.1 725098 726261 1 + 1164 Mobile element protein - none -
fig|6666666.230104.peg.2860 CDS JNHN01000174.1 726475 728838 1 + 2364 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230104.peg.2861 CDS JNHN01000174.1 728935 730443 1 + 1509 COG5434 Endopygalactorunase - none -
fig|6666666.230104.peg.2862 CDS JNHN01000174.1 731192 730671 -2 - 522 Mobile element protein - none -
fig|6666666.230104.peg.2863 CDS JNHN01000174.1 731497 731384 -1 - 114 Mobile element protein - none -
fig|6666666.230104.peg.2864 CDS JNHN01000174.1 734215 731846 -1 - 2370 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230104.peg.2865 CDS JNHN01000174.1 736224 734239 -3 - 1986 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.2866 CDS JNHN01000174.1 737829 736231 -3 - 1599 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230104.peg.2867 CDS JNHN01000174.1 739734 737929 -3 - 1806 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.2868 CDS JNHN01000174.1 742826 739794 -2 - 3033 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.2869 CDS JNHN01000174.1 743427 742927 -3 - 501 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230104.peg.2870 CDS JNHN01000174.1 744728 743637 -2 - 1092 Prokaryotic ATPase - none -
fig|6666666.230104.peg.2871 CDS JNHN01000174.1 747688 744884 -1 - 2805 DNA-binding response regulator, AraC family - none -
fig|6666666.230104.peg.2872 CDS JNHN01000174.1 750554 747780 -2 - 2775 FIG00408047: hypothetical protein - none -
fig|6666666.230104.peg.2873 CDS JNHN01000174.1 752469 750610 -3 - 1860 Putative transport protein - none -
fig|6666666.230104.peg.2874 CDS JNHN01000174.1 752823 752548 -3 - 276 FIG00413640: hypothetical protein - none -
fig|6666666.230104.peg.2875 CDS JNHN01000174.1 752984 753283 2 + 300 FIG00417535: hypothetical protein - none -
fig|6666666.230104.peg.2876 CDS JNHN01000174.1 753803 753453 -2 - 351 Transcriptional regulator, HxlR family - none -
fig|6666666.230104.peg.2877 CDS JNHN01000174.1 754017 754679 3 + 663 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.230104.peg.2878 CDS JNHN01000174.1 755397 754684 -3 - 714 FIG00415273: hypothetical protein - none -
fig|6666666.230104.peg.2879 CDS JNHN01000174.1 755530 755375 -1 - 156 hypothetical protein - none -
fig|6666666.230104.peg.2880 CDS JNHN01000174.1 755585 756442 2 + 858 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.2881 CDS JNHN01000174.1 756785 757681 2 + 897 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.230104.peg.2882 CDS JNHN01000174.1 758701 757688 -1 - 1014 putative N-acetylmuramoyl-L-alanine amidase - none -
fig|6666666.230104.peg.2883 CDS JNHN01000174.1 758842 760122 1 + 1281 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.230104.peg.2884 CDS JNHN01000174.1 762700 760187 -1 - 2514 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230104.peg.2885 CDS JNHN01000174.1 762867 765155 3 + 2289 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230104.peg.2886 CDS JNHN01000174.1 765519 766856 3 + 1338 NAD-specific glutamate dehydrogenase (EC 1.4.1.2) / NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.230104.peg.2887 CDS JNHN01000174.1 767043 768224 3 + 1182 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.230104.peg.2888 CDS JNHN01000174.1 770524 768320 -1 - 2205 Hyaluronidase - none -
fig|6666666.230104.peg.2889 CDS JNHN01000174.1 771227 770658 -2 - 570 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.230104.peg.2890 CDS JNHN01000174.1 771486 771250 -3 - 237 FIG00408312: hypothetical protein - none -
fig|6666666.230104.peg.2891 CDS JNHN01000174.1 772046 771483 -2 - 564 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.230104.peg.2892 CDS JNHN01000174.1 772955 772083 -2 - 873 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.230104.peg.2893 CDS JNHN01000174.1 773059 773751 1 + 693 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE
fig|6666666.230104.peg.2894 CDS JNHN01000174.1 773873 774493 2 + 621 FIG00936255: hypothetical protein - none -
fig|6666666.230104.peg.2895 CDS JNHN01000174.1 774592 775899 1 + 1308 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.230104.peg.2896 CDS JNHN01000174.1 775901 776437 2 + 537 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.230104.peg.2897 CDS JNHN01000174.1 776434 777291 1 + 858 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.230104.peg.2898 CDS JNHN01000174.1 777328 778473 1 + 1146 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.230104.peg.2899 CDS JNHN01000174.1 778586 779917 2 + 1332 Membrane-associated zinc metalloprotease - none -
fig|6666666.230104.peg.2900 CDS JNHN01000174.1 780029 779889 -2 - 141 hypothetical protein - none -
fig|6666666.230104.peg.2901 CDS JNHN01000174.1 780950 780051 -2 - 900 Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230104.peg.2902 CDS JNHN01000175.1 14 271 2 + 258 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.230104.peg.2903 CDS JNHN01000175.1 378 1574 3 + 1197 Major facilitator family transporter - none -
fig|6666666.230104.peg.2904 CDS JNHN01000175.1 1571 2245 2 + 675 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.230104.peg.2905 CDS JNHN01000175.1 2337 3593 3 + 1257 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.230104.peg.2906 CDS JNHN01000175.1 3668 4693 2 + 1026 FIG00405727: hypothetical protein - none -
fig|6666666.230104.peg.2907 CDS JNHN01000175.1 4775 6967 2 + 2193 TPR domain protein - none -
fig|6666666.230104.peg.2908 CDS JNHN01000175.1 7545 6964 -3 - 582 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.230104.peg.2909 CDS JNHN01000175.1 8122 7592 -1 - 531 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) - none -
fig|6666666.230104.peg.2910 CDS JNHN01000175.1 8999 8202 -2 - 798 FIG137884: hypothetical protein Coenzyme A Biosynthesis cluster
fig|6666666.230104.peg.2911 CDS JNHN01000175.1 9339 9004 -3 - 336 FIG00407938: hypothetical protein - none -
fig|6666666.230104.peg.2912 CDS JNHN01000175.1 9878 9342 -2 - 537 Nitroreductase family protein - none -
fig|6666666.230104.peg.2913 CDS JNHN01000175.1 9972 10955 3 + 984 FIG00405090: hypothetical protein - none -
fig|6666666.230104.peg.2914 CDS JNHN01000175.1 13547 10968 -2 - 2580 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) Cellulosome
fig|6666666.230104.peg.2915 CDS JNHN01000175.1 15049 13724 -1 - 1326 Sucrose phosphorylase (EC 2.4.1.7) Sucrose utilization
fig|6666666.230104.peg.2916 CDS JNHN01000175.1 16741 15131 -1 - 1611 FIG00411445: hypothetical protein - none -
fig|6666666.230104.peg.2917 CDS JNHN01000175.1 18385 16766 -1 - 1620 SusD, outer membrane protein Cellulosome
fig|6666666.230104.peg.2918 CDS JNHN01000175.1 21354 18397 -3 - 2958 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.2919 CDS JNHN01000175.1 24596 22119 -2 - 2478 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.2920 CDS JNHN01000175.1 25791 24625 -3 - 1167 arabinogalactan endo-1,4-beta-galactosidase - none -
fig|6666666.230104.peg.2921 CDS JNHN01000175.1 26016 27020 3 + 1005 Maltose operon transcriptional repressor MalR, LacI family Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.2922 CDS JNHN01000175.1 27040 28413 1 + 1374 Sugar transporter - none -
fig|6666666.230104.peg.2923 CDS JNHN01000175.1 28735 31053 1 + 2319 Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis;
Trehalose Uptake and Utilization
fig|6666666.230104.peg.2924 CDS JNHN01000175.1 31220 32263 2 + 1044 RND efflux system membrane fusion protein - none -
fig|6666666.230104.peg.2925 CDS JNHN01000175.1 32314 35343 1 + 3030 AcrB/D/F family transporter - none -
fig|6666666.230104.peg.2926 CDS JNHN01000175.1 37978 36101 -1 - 1878 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230104.peg.2927 CDS JNHN01000175.1 39816 37978 -3 - 1839 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230104.peg.2928 CDS JNHN01000175.1 40083 39856 -3 - 228 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230104.peg.2929 CDS JNHN01000175.1 40790 40308 -2 - 483 FIG00407890: hypothetical protein - none -
fig|6666666.230104.peg.2930 CDS JNHN01000175.1 44286 41242 -3 - 3045 Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal - none -
fig|6666666.230104.peg.2931 CDS JNHN01000175.1 44816 44283 -2 - 534 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.230104.peg.2932 CDS JNHN01000175.1 46692 44824 -3 - 1869 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.230104.peg.2933 CDS JNHN01000175.1 46941 46705 -3 - 237 DEAD/DEAH box helicase-like protein - none -
fig|6666666.230104.peg.2934 CDS JNHN01000175.1 47931 47605 -3 - 327 hypothetical protein - none -
fig|6666666.230104.peg.2935 CDS JNHN01000175.1 49133 48153 -2 - 981 TPR-repeat-containing protein - none -
fig|6666666.230104.peg.2936 CDS JNHN01000175.1 50922 49348 -3 - 1575 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.230104.peg.2937 CDS JNHN01000175.1 51744 50944 -3 - 801 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230104.peg.2938 CDS JNHN01000175.1 51721 51855 1 + 135 hypothetical protein - none -
fig|6666666.230104.peg.2939 CDS JNHN01000175.1 52418 51873 -2 - 546 FIG00937849: hypothetical protein - none -
fig|6666666.230104.peg.2940 CDS JNHN01000175.1 53141 52488 -2 - 654 Transporter, LysE family - none -
fig|6666666.230104.peg.2941 CDS JNHN01000175.1 53318 55534 2 + 2217 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230104.peg.2942 CDS JNHN01000175.1 55778 55548 -2 - 231 hypothetical protein - none -
fig|6666666.230104.peg.2943 CDS JNHN01000175.1 55755 59426 3 + 3672 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.230104.peg.2944 CDS JNHN01000175.1 59485 63642 1 + 4158 DNA-binding response regulator, AraC family - none -
fig|6666666.230104.peg.2945 CDS JNHN01000175.1 63654 64202 3 + 549 Chromate transport protein - none -
fig|6666666.230104.peg.2946 CDS JNHN01000175.1 64280 64849 2 + 570 Chromate transport protein - none -
fig|6666666.230104.peg.2947 CDS JNHN01000175.1 66413 64902 -2 - 1512 COG1649 predicted glycoside hydrolase - none -
fig|6666666.230104.peg.2948 CDS JNHN01000175.1 68403 66454 -3 - 1950 two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.2949 CDS JNHN01000175.1 68588 71371 2 + 2784 Excinuclease ABC subunit A paralog in greater Bacteroides group DNA repair, UvrABC system
fig|6666666.230104.peg.2950 CDS JNHN01000175.1 72650 71472 -2 - 1179 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.230104.peg.2951 CDS JNHN01000175.1 72789 73160 3 + 372 FIG00417077: hypothetical protein - none -
fig|6666666.230104.peg.2952 CDS JNHN01000175.1 73163 73477 2 + 315 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.230104.peg.2953 CDS JNHN01000175.1 74089 73601 -1 - 489 FIG00403605: hypothetical protein - none -
fig|6666666.230104.peg.2954 CDS JNHN01000175.1 74336 74115 -2 - 222 FIG00404951: hypothetical protein - none -
fig|6666666.230104.peg.2955 CDS JNHN01000175.1 75766 74336 -1 - 1431 Carbon starvation protein A Carbon Starvation
fig|6666666.230104.peg.2956 CDS JNHN01000175.1 75838 77346 1 + 1509 COG1649 predicted glycoside hydrolase - none -
fig|6666666.230104.peg.2957 CDS JNHN01000175.1 78538 77330 -1 - 1209 FIG00403009: hypothetical protein - none -
fig|6666666.230104.peg.2958 CDS JNHN01000175.1 78667 79845 1 + 1179 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.230104.peg.2959 CDS JNHN01000175.1 79887 83444 3 + 3558 Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) Methionine Degradation;
Pyruvate:ferredoxin oxidoreductase
fig|6666666.230104.peg.2960 CDS JNHN01000175.1 83535 83723 3 + 189 FIG00416554: hypothetical protein - none -
fig|6666666.230104.peg.2961 CDS JNHN01000175.1 86545 83786 -1 - 2760 DNA-binding response regulator, AraC family - none -
fig|6666666.230104.peg.2962 CDS JNHN01000175.1 87504 86617 -3 - 888 Fructokinase (EC 2.7.1.4) Sucrose utilization
fig|6666666.230104.peg.2963 CDS JNHN01000175.1 88905 87739 -3 - 1167 Predicted glucose transporter in maltodextrin utilization gene cluster Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.2964 CDS JNHN01000175.1 90630 88924 -3 - 1707 Levanase (EC 3.2.1.65) - none -
fig|6666666.230104.peg.2965 CDS JNHN01000175.1 92359 90875 -1 - 1485 Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) - none -
fig|6666666.230104.peg.2966 CDS JNHN01000175.1 94494 92359 -3 - 2136 Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) - none -
fig|6666666.230104.peg.2967 CDS JNHN01000175.1 96331 94568 -1 - 1764 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.2968 CDS JNHN01000175.1 99404 96372 -2 - 3033 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.2969 CDS JNHN01000175.1 100553 99702 -2 - 852 Patatin-like phospholipase - none -
fig|6666666.230104.peg.2970 CDS JNHN01000175.1 100646 101848 2 + 1203 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.230104.peg.2971 CDS JNHN01000175.1 103653 101893 -3 - 1761 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.230104.peg.2972 CDS JNHN01000175.1 103990 104883 1 + 894 Electron transfer flavoprotein, beta subunit - none -
fig|6666666.230104.peg.2973 CDS JNHN01000175.1 104888 105907 2 + 1020 Electron transfer flavoprotein, alpha subunit - none -
fig|6666666.230104.peg.2974 CDS JNHN01000175.1 105922 106743 1 + 822 Regulatory sensor-transducer, BlaR1/MecR1 family / TonB family protein - none -
fig|6666666.230104.peg.2975 CDS JNHN01000175.1 106754 108460 2 + 1707 Acyl-CoA dehydrogenase (EC 1.3.8.7) - none -
fig|6666666.230104.peg.2976 CDS JNHN01000175.1 108909 108598 -3 - 312 FIG00403615: hypothetical protein - none -
fig|6666666.230104.peg.2977 CDS JNHN01000175.1 109877 108909 -2 - 969 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.230104.peg.2978 CDS JNHN01000175.1 110186 112696 2 + 2511 Endoglucanase D precursor (EC 3.2.1.4) - none -
fig|6666666.230104.peg.2979 CDS JNHN01000175.1 113893 112868 -1 - 1026 Low-specificity L-threonine aldolase (EC 4.1.2.48) - none -
fig|6666666.230104.peg.2980 CDS JNHN01000175.1 114060 113905 -3 - 156 hypothetical protein - none -
fig|6666666.230104.peg.2981 CDS JNHN01000175.1 114217 114044 -1 - 174 hypothetical protein - none -
fig|6666666.230104.peg.2982 CDS JNHN01000175.1 116154 114517 -3 - 1638 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.230104.peg.2983 CDS JNHN01000175.1 116464 116192 -1 - 273 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.230104.peg.2984 CDS JNHN01000175.1 116690 117499 2 + 810 FIG00406457: hypothetical protein - none -
fig|6666666.230104.peg.2985 CDS JNHN01000175.1 117589 120036 1 + 2448 putative TonB-dependent receptor - none -
fig|6666666.230104.peg.2986 CDS JNHN01000175.1 120056 121108 2 + 1053 putative two-component system sensor but no kinase domain - none -
fig|6666666.230104.peg.2987 CDS JNHN01000175.1 121092 121781 3 + 690 two-component system response regulator protein - none -
fig|6666666.230104.peg.2988 CDS JNHN01000175.1 122523 121783 -3 - 741 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.230104.peg.2989 CDS JNHN01000175.1 122778 122572 -3 - 207 FIG00411025: hypothetical protein - none -
fig|6666666.230104.peg.2990 CDS JNHN01000175.1 124103 122877 -2 - 1227 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.230104.peg.2991 CDS JNHN01000175.1 124371 125534 3 + 1164 hypothetical protein - none -
fig|6666666.230104.peg.2992 CDS JNHN01000175.1 126335 125640 -2 - 696 FIG00897182: hypothetical protein - none -
fig|6666666.230104.peg.2993 CDS JNHN01000175.1 126355 126468 1 + 114 hypothetical protein - none -
fig|6666666.230104.peg.2994 CDS JNHN01000175.1 127766 126477 -2 - 1290 Alpha-L-fucosidase (EC 3.2.1.51) - none -
fig|6666666.230104.peg.2995 CDS JNHN01000175.1 129155 127884 -2 - 1272 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.230104.peg.2996 CDS JNHN01000175.1 129664 129152 -1 - 513 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.230104.peg.2997 CDS JNHN01000175.1 130442 129768 -2 - 675 Peptidase, M49 family - none -
fig|6666666.230104.peg.2998 CDS JNHN01000175.1 132476 130449 -2 - 2028 Dipeptidyl-peptidase III (EC 3.4.14.4) - none -
fig|6666666.230104.peg.2999 CDS JNHN01000175.1 133072 132599 -1 - 474 Transcriptional regulator, AraC/XylS family - none -
fig|6666666.230104.peg.3000 CDS JNHN01000175.1 133354 135165 1 + 1812 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.230104.peg.3001 CDS JNHN01000175.1 136020 135169 -3 - 852 TPR-repeat-containing protein - none -
fig|6666666.230104.peg.3002 CDS JNHN01000175.1 136986 136036 -3 - 951 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.230104.peg.3003 CDS JNHN01000175.1 137074 137187 1 + 114 hypothetical protein - none -
fig|6666666.230104.peg.3004 CDS JNHN01000175.1 138457 137396 -1 - 1062 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.230104.peg.3005 CDS JNHN01000175.1 138704 138447 -2 - 258 FIG00415981: hypothetical protein - none -
fig|6666666.230104.peg.3006 CDS JNHN01000175.1 140258 138717 -2 - 1542 (R)-citramalate synthase (EC 2.3.1.182) Branched-Chain Amino Acid Biosynthesis
fig|6666666.230104.peg.3007 CDS JNHN01000175.1 140811 140248 -3 - 564 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.230104.peg.3008 CDS JNHN01000175.1 142351 140957 -1 - 1395 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.230104.peg.3009 CDS JNHN01000175.1 143890 142394 -1 - 1497 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.230104.peg.3010 CDS JNHN01000175.1 144493 144257 -1 - 237 hypothetical protein - none -
fig|6666666.230104.peg.3011 CDS JNHN01000176.1 598 810 1 + 213 hypothetical protein - none -
fig|6666666.230104.peg.3012 CDS JNHN01000176.1 2325 2017 -3 - 309 hypothetical protein - none -
fig|6666666.230104.peg.3013 CDS JNHN01000176.1 2485 2351 -1 - 135 hypothetical protein - none -
fig|6666666.230104.peg.3014 CDS JNHN01000176.1 2931 2761 -3 - 171 hypothetical protein - none -
fig|6666666.230104.peg.3015 CDS JNHN01000176.1 4380 3220 -3 - 1161 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230104.peg.3016 CDS JNHN01000176.1 5090 4392 -2 - 699 N-acetylmannosaminyltransferase (EC 2.4.1.187) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230104.peg.3017 CDS JNHN01000176.1 6296 5103 -2 - 1194 FIG00936240: hypothetical protein - none -
fig|6666666.230104.peg.3018 CDS JNHN01000176.1 7513 7274 -1 - 240 Maltose O-acetyltransferase (EC 2.3.1.79) Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.3019 CDS JNHN01000176.1 8865 7684 -3 - 1182 hypothetical protein - none -
fig|6666666.230104.peg.3020 CDS JNHN01000176.1 10078 8897 -1 - 1182 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230104.peg.3021 CDS JNHN01000176.1 10483 10085 -1 - 399 Tryptophan synthase beta chain like (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.230104.peg.3022 CDS JNHN01000176.1 11644 10490 -1 - 1155 Capsular polysaccharide synthesis enzyme Cap5F - none -
fig|6666666.230104.peg.3023 CDS JNHN01000176.1 12892 11819 -1 - 1074 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria
fig|6666666.230104.peg.3024 CDS JNHN01000176.1 14067 12898 -3 - 1170 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230104.peg.3025 CDS JNHN01000176.1 15276 14074 -3 - 1203 hypothetical protein - none -
fig|6666666.230104.peg.3026 CDS JNHN01000176.1 16607 15264 -2 - 1344 O-antigen flippase Wzx - none -
fig|6666666.230104.peg.3027 CDS JNHN01000176.1 18616 17426 -1 - 1191 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.230104.peg.3028 CDS JNHN01000176.1 19417 18713 -1 - 705 Protein-tyrosine-phosphatase (EC 3.1.3.48) - none -
fig|6666666.230104.peg.3029 CDS JNHN01000176.1 21843 19477 -3 - 2367 Tyrosine-protein kinase Wzc (EC 2.7.10.2) CBSS-258594.1.peg.3339
fig|6666666.230104.peg.3030 CDS JNHN01000176.1 22679 21885 -2 - 795 Polysaccharide export outer membrane protein - none -
fig|6666666.230104.peg.3031 CDS JNHN01000176.1 23812 22706 -1 - 1107 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230104.peg.3032 CDS JNHN01000176.1 24256 23837 -1 - 420 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230104.peg.3033 CDS JNHN01000176.1 26103 24880 -3 - 1224 Mobile element protein - none -
fig|6666666.230104.peg.3034 CDS JNHN01000176.1 26302 26592 1 + 291 hypothetical protein - none -
fig|6666666.230104.peg.3035 CDS JNHN01000176.1 26961 28799 3 + 1839 FIG00936597: hypothetical protein - none -
fig|6666666.230104.peg.3036 CDS JNHN01000176.1 28854 29129 3 + 276 hypothetical protein - none -
fig|6666666.230104.peg.3037 CDS JNHN01000176.1 29202 30974 3 + 1773 DNA topoisomerase III, Bacteroidales-type (EC 5.99.1.2) DNA topoisomerases, Type I, ATP-independent
fig|6666666.230104.peg.3038 CDS JNHN01000176.1 31276 31488 1 + 213 hypothetical protein - none -
fig|6666666.230104.peg.3039 CDS JNHN01000176.1 31507 31716 1 + 210 hypothetical protein - none -
fig|6666666.230104.peg.3040 CDS JNHN01000176.1 31760 32791 2 + 1032 hypothetical protein - none -
fig|6666666.230104.peg.3041 CDS JNHN01000176.1 32814 33035 3 + 222 FIG00408893: hypothetical protein - none -
fig|6666666.230104.peg.3042 CDS JNHN01000176.1 33072 34181 3 + 1110 hypothetical protein - none -
fig|6666666.230104.peg.3043 CDS JNHN01000176.1 34192 34893 1 + 702 hypothetical protein - none -
fig|6666666.230104.peg.3044 CDS JNHN01000176.1 34890 35681 3 + 792 ThiF family protein, ubiquitin-activating enzyme - none -
fig|6666666.230104.peg.3045 CDS JNHN01000176.1 36469 35765 -1 - 705 Maebl - none -
fig|6666666.230104.peg.3046 CDS JNHN01000176.1 36819 36526 -3 - 294 hypothetical protein - none -
fig|6666666.230104.peg.3047 CDS JNHN01000176.1 37289 37573 2 + 285 hypothetical protein - none -
fig|6666666.230104.peg.3048 CDS JNHN01000176.1 37581 37880 3 + 300 hypothetical protein - none -
fig|6666666.230104.peg.3049 CDS JNHN01000176.1 38195 38058 -2 - 138 hypothetical protein - none -
fig|6666666.230104.peg.3050 CDS JNHN01000176.1 38540 38866 2 + 327 hypothetical protein - none -
fig|6666666.230104.peg.3051 CDS JNHN01000176.1 38883 39986 3 + 1104 hypothetical protein - none -
fig|6666666.230104.peg.3052 CDS JNHN01000176.1 43076 40206 -2 - 2871 putative helicase - none -
fig|6666666.230104.peg.3053 CDS JNHN01000176.1 44269 43073 -1 - 1197 Predicted ATPase (AAA+ superfamily) - none -
fig|6666666.230104.peg.3054 CDS JNHN01000176.1 44441 44328 -2 - 114 hypothetical protein - none -
fig|6666666.230104.peg.3055 CDS JNHN01000176.1 44788 45567 1 + 780 hypothetical protein - none -
fig|6666666.230104.peg.3056 CDS JNHN01000176.1 46527 45664 -3 - 864 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230104.peg.3057 CDS JNHN01000176.1 46851 47810 3 + 960 AAA-family ATPase - none -
fig|6666666.230104.peg.3058 CDS JNHN01000176.1 47824 50226 1 + 2403 hypothetical protein - none -
fig|6666666.230104.peg.3059 CDS JNHN01000176.1 50838 52070 3 + 1233 Tyrosine type site-specific recombinase - none -
fig|6666666.230104.peg.3060 CDS JNHN01000176.1 53184 52492 -3 - 693 hypothetical protein - none -
fig|6666666.230104.peg.3061 CDS JNHN01000176.1 54583 53294 -1 - 1290 hypothetical protein - none -
fig|6666666.230104.peg.3062 CDS JNHN01000176.1 56334 55393 -3 - 942 clindamycin resistance transfer factor BtgB - none -
fig|6666666.230104.peg.3063 CDS JNHN01000176.1 56983 56339 -1 - 645 clindamycin resistance transfer factor BtgA - none -
fig|6666666.230104.peg.3064 CDS JNHN01000176.1 57940 57692 -1 - 249 hypothetical protein - none -
fig|6666666.230104.peg.3065 CDS JNHN01000176.1 58214 58101 -2 - 114 hypothetical protein - none -
fig|6666666.230104.peg.3066 CDS JNHN01000176.1 59848 59714 -1 - 135 hypothetical protein - none -
fig|6666666.230104.peg.3067 CDS JNHN01000176.1 60230 60808 2 + 579 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3068 CDS JNHN01000176.1 61316 60903 -2 - 414 hypothetical protein - none -
fig|6666666.230104.peg.3069 CDS JNHN01000176.1 61913 61353 -2 - 561 hypothetical protein - none -
fig|6666666.230104.peg.3070 CDS JNHN01000176.1 62350 62712 1 + 363 hypothetical protein - none -
fig|6666666.230104.peg.3071 CDS JNHN01000176.1 62716 63042 1 + 327 FIG00896888: hypothetical protein - none -
fig|6666666.230104.peg.3072 CDS JNHN01000176.1 63043 63183 1 + 141 hypothetical protein - none -
fig|6666666.230104.peg.3073 CDS JNHN01000176.1 63505 63347 -1 - 159 hypothetical protein - none -
fig|6666666.230104.peg.3074 CDS JNHN01000176.1 64179 63538 -3 - 642 Integrase - none -
fig|6666666.230104.peg.3075 CDS JNHN01000176.1 64752 64204 -3 - 549 Integrase - none -
fig|6666666.230104.peg.3076 CDS JNHN01000176.1 66003 64774 -3 - 1230 Integrase - none -
fig|6666666.230104.peg.3077 CDS JNHN01000176.1 66356 66472 2 + 117 Tyrosine type site-specific recombinase - none -
fig|6666666.230104.peg.3078 CDS JNHN01000176.1 66708 66577 -3 - 132 hypothetical protein - none -
fig|6666666.230104.peg.3079 CDS JNHN01000176.1 66881 67000 2 + 120 hypothetical protein - none -
fig|6666666.230104.peg.3080 CDS JNHN01000176.1 67411 67115 -1 - 297 hypothetical protein - none -
fig|6666666.230104.peg.3081 CDS JNHN01000176.1 67704 67417 -3 - 288 FIG00412260: hypothetical protein - none -
fig|6666666.230104.peg.3082 CDS JNHN01000176.1 68047 68352 1 + 306 hypothetical protein - none -
fig|6666666.230104.peg.3083 CDS JNHN01000176.1 68441 69565 2 + 1125 FIG00939579: hypothetical protein - none -
fig|6666666.230104.peg.3084 CDS JNHN01000176.1 69899 70933 2 + 1035 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230104.peg.3085 CDS JNHN01000176.1 71090 71473 2 + 384 mobilization protein - none -
fig|6666666.230104.peg.3086 CDS JNHN01000176.1 71439 72356 3 + 918 Mobilization protein BmgA - none -
fig|6666666.230104.peg.3087 CDS JNHN01000176.1 72361 73086 1 + 726 FIG00898683: hypothetical protein - none -
fig|6666666.230104.peg.3088 CDS JNHN01000176.1 73489 73136 -1 - 354 hypothetical protein - none -
fig|6666666.230104.peg.3089 CDS JNHN01000176.1 74012 73593 -2 - 420 hypothetical protein - none -
fig|6666666.230104.peg.3090 CDS JNHN01000176.1 74888 74250 -2 - 639 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.230104.peg.3091 CDS JNHN01000176.1 75489 74893 -3 - 597 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.230104.peg.3092 CDS JNHN01000176.1 75600 76439 3 + 840 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.3093 CDS JNHN01000176.1 76517 77893 2 + 1377 FIG00408681: hypothetical protein - none -
fig|6666666.230104.peg.3094 CDS JNHN01000176.1 78544 79275 1 + 732 hypothetical protein - none -
fig|6666666.230104.peg.3095 CDS JNHN01000176.1 80120 80884 2 + 765 transcriptional regulator - none -
fig|6666666.230104.peg.3096 CDS JNHN01000176.1 81192 80887 -3 - 306 hypothetical protein - none -
fig|6666666.230104.peg.3097 CDS JNHN01000176.1 81181 81357 1 + 177 hypothetical protein - none -
fig|6666666.230104.peg.3098 CDS JNHN01000176.1 81599 83659 2 + 2061 FIG00403395: hypothetical protein - none -
fig|6666666.230104.peg.3099 CDS JNHN01000176.1 84290 83670 -2 - 621 Chloramphenicol acetyltransferase (EC 2.3.1.28) - none -
fig|6666666.230104.peg.3100 CDS JNHN01000176.1 85597 84305 -1 - 1293 BexA - none -
fig|6666666.230104.peg.3101 CDS JNHN01000176.1 85585 85725 1 + 141 hypothetical protein - none -
fig|6666666.230104.peg.3102 CDS JNHN01000176.1 86225 87142 2 + 918 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.230104.peg.3103 CDS JNHN01000176.1 87209 88135 2 + 927 Transcription regulator [contains diacylglycerol kinase catalytic domain] - none -
fig|6666666.230104.peg.3104 CDS JNHN01000176.1 88159 88959 1 + 801 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation
fig|6666666.230104.peg.3105 CDS JNHN01000176.1 89063 91891 2 + 2829 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.230104.peg.3106 CDS JNHN01000176.1 92032 93462 1 + 1431 FIG00406426: hypothetical protein - none -
fig|6666666.230104.peg.3107 CDS JNHN01000176.1 93488 94291 2 + 804 ATP-binding protein - none -
fig|6666666.230104.peg.3108 CDS JNHN01000176.1 94288 94800 1 + 513 Lipoprotein spr precursor - none -
fig|6666666.230104.peg.3109 CDS JNHN01000176.1 94878 95762 3 + 885 FIG00404457: hypothetical protein - none -
fig|6666666.230104.peg.3110 CDS JNHN01000176.1 96203 97729 2 + 1527 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.3111 CDS JNHN01000176.1 99997 97808 -1 - 2190 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230104.peg.3112 CDS JNHN01000176.1 99980 100174 2 + 195 hypothetical protein - none -
fig|6666666.230104.peg.3113 CDS JNHN01000177.1 12 2951 3 + 2940 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.3114 CDS JNHN01000177.1 2998 4308 1 + 1311 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.3115 CDS JNHN01000177.1 4426 5622 1 + 1197 Fosmidomycin resistance protein - none -
fig|6666666.230104.peg.3116 CDS JNHN01000177.1 6472 5693 -1 - 780 Eukaryotic-type low-affinity urea transporter - none -
fig|6666666.230104.peg.3117 CDS JNHN01000177.1 6744 7049 3 + 306 FIG00412493: hypothetical protein - none -
fig|6666666.230104.peg.3118 CDS JNHN01000177.1 7046 7615 2 + 570 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.230104.peg.3119 CDS JNHN01000177.1 7650 9647 3 + 1998 Glycogen debranching enzyme (EC 3.2.1.-) / Pullulanase (EC 3.2.1.41) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.230104.peg.3120 CDS JNHN01000177.1 9655 11130 1 + 1476 Putative molybdenum transport ATP-binding protein modF - none -
fig|6666666.230104.peg.3121 CDS JNHN01000177.1 11233 11889 1 + 657 Transaldolase (EC 2.2.1.2) Pentose phosphate pathway
fig|6666666.230104.peg.3122 CDS JNHN01000177.1 12083 13903 2 + 1821 putative sulfatase - none -
fig|6666666.230104.peg.3123 CDS JNHN01000177.1 13979 14584 2 + 606 putative membrane-associated phospholipid phosphatase - none -
fig|6666666.230104.peg.3124 CDS JNHN01000177.1 17192 14595 -2 - 2598 FIG00898317: hypothetical protein - none -
fig|6666666.230104.peg.3125 CDS JNHN01000177.1 18078 17212 -3 - 867 FIG00898464: hypothetical protein - none -
fig|6666666.230104.peg.3126 CDS JNHN01000177.1 18277 19731 1 + 1455 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.230104.peg.3127 CDS JNHN01000177.1 19770 20453 3 + 684 Transcriptional regulatory protein rprY - none -
fig|6666666.230104.peg.3128 CDS JNHN01000177.1 20512 21681 1 + 1170 Small-conductance mechanosensitive channel - none -
fig|6666666.230104.peg.3129 CDS JNHN01000177.1 22736 21678 -2 - 1059 FIG00897204: hypothetical protein - none -
fig|6666666.230104.peg.3130 CDS JNHN01000177.1 24235 22778 -1 - 1458 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.230104.peg.3131 CDS JNHN01000177.1 24468 24707 3 + 240 FIG00415025: hypothetical protein - none -
fig|6666666.230104.peg.3132 CDS JNHN01000177.1 24754 25335 1 + 582 Outer membrane protein H precursor Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.230104.peg.3133 CDS JNHN01000177.1 26252 25479 -2 - 774 Cytoplasmic copper homeostasis protein cutC - none -
fig|6666666.230104.peg.3134 CDS JNHN01000177.1 27876 26338 -3 - 1539 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) CBSS-226186.1.peg.4416;
Purine conversions
fig|6666666.230104.peg.3135 CDS JNHN01000177.1 28292 28002 -2 - 291 Cell division ZapA family protein CBSS-226186.1.peg.4416
fig|6666666.230104.peg.3136 CDS JNHN01000177.1 28621 28307 -1 - 315 FIG034863: hypothetical protein CBSS-226186.1.peg.4416
fig|6666666.230104.peg.3137 CDS JNHN01000177.1 29164 29529 1 + 366 hypothetical protein - none -
fig|6666666.230104.peg.3138 CDS JNHN01000177.1 29545 30168 1 + 624 membrane protein, putative - none -
fig|6666666.230104.peg.3139 CDS JNHN01000177.1 30333 30947 3 + 615 hypothetical protein - none -
fig|6666666.230104.peg.3140 CDS JNHN01000177.1 30949 31239 1 + 291 Transcriptional regulators, marR/emrR family - none -
fig|6666666.230104.peg.3141 CDS JNHN01000177.1 31305 31883 3 + 579 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) @ S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.230104.peg.3142 CDS JNHN01000177.1 32247 31888 -3 - 360 Hypothetical protein DUF454 - none -
fig|6666666.230104.peg.3143 CDS JNHN01000177.1 32283 33155 3 + 873 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230104.peg.3144 CDS JNHN01000177.1 33171 34004 3 + 834 hypothetical protein - none -
fig|6666666.230104.peg.3145 CDS JNHN01000177.1 34131 34442 3 + 312 Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230104.peg.3146 CDS JNHN01000177.1 34429 34974 1 + 546 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230104.peg.3147 CDS JNHN01000177.1 35755 35180 -1 - 576 G:T/U mismatch-specific uracil/thymine DNA-glycosylase DNA repair, bacterial;
Uracil-DNA glycosylase
fig|6666666.230104.peg.3148 CDS JNHN01000177.1 37906 35810 -1 - 2097 Lysine 2,3-aminomutase (EC 5.4.3.2) - none -
fig|6666666.230104.peg.3149 CDS JNHN01000177.1 38696 38070 -2 - 627 FIG00404554: hypothetical protein - none -
fig|6666666.230104.peg.3150 CDS JNHN01000177.1 40171 38783 -1 - 1389 Amino acid carrier protein - none -
fig|6666666.230104.peg.3151 CDS JNHN01000177.1 41101 40394 -1 - 708 putative ATP-dependent DNA helicase - none -
fig|6666666.230104.peg.3152 CDS JNHN01000177.1 41185 41361 1 + 177 FIG00404335: hypothetical protein - none -
fig|6666666.230104.peg.3153 CDS JNHN01000177.1 41414 42721 2 + 1308 Biotin synthase related domain containing protein - none -
fig|6666666.230104.peg.3154 CDS JNHN01000177.1 42718 43491 1 + 774 Domain often clustered or fused with uracil-DNA glycosylase Uracil-DNA glycosylase
fig|6666666.230104.peg.3155 CDS JNHN01000177.1 44169 43498 -3 - 672 Mg(2+) transport ATPase protein C Magnesium transport
fig|6666666.230104.peg.3156 CDS JNHN01000177.1 45172 44192 -1 - 981 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Murein Hydrolases
fig|6666666.230104.peg.3157 CDS JNHN01000177.1 45940 45215 -1 - 726 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.230104.peg.3158 CDS JNHN01000177.1 46363 45953 -1 - 411 FIG004064: hypothetical protein - none -
fig|6666666.230104.peg.3159 CDS JNHN01000177.1 48258 46387 -3 - 1872 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.3160 CDS JNHN01000177.1 48680 48519 -2 - 162 hypothetical protein - none -
fig|6666666.230104.peg.3161 CDS JNHN01000177.1 48660 49217 3 + 558 lipase/acylhydrolase family protein - none -
fig|6666666.230104.peg.3162 CDS JNHN01000177.1 49240 49704 1 + 465 MaoC family protein - none -
fig|6666666.230104.peg.3163 CDS JNHN01000177.1 50215 49859 -1 - 357 FIG00404860: hypothetical protein - none -
fig|6666666.230104.peg.3164 CDS JNHN01000177.1 50496 50218 -3 - 279 Zinc finger domain-containing protein - none -
fig|6666666.230104.peg.3165 CDS JNHN01000177.1 50991 50533 -3 - 459 IAA acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.230104.peg.3166 CDS JNHN01000177.1 51137 51619 2 + 483 FIG00414117: hypothetical protein - none -
fig|6666666.230104.peg.3167 CDS JNHN01000177.1 51678 51995 3 + 318 putative methylated-DNA methyltransferase - none -
fig|6666666.230104.peg.3168 CDS JNHN01000177.1 52000 52842 1 + 843 Endonuclease IV (EC 3.1.21.2) DNA repair, bacterial
fig|6666666.230104.peg.3169 CDS JNHN01000177.1 53236 52847 -1 - 390 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation;
Ribosome biogenesis bacterial
fig|6666666.230104.peg.3170 CDS JNHN01000177.1 53719 53249 -1 - 471 PhnO protein - none -
fig|6666666.230104.peg.3171 CDS JNHN01000177.1 55386 53758 -3 - 1629 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.230104.peg.3172 CDS JNHN01000178.1 2098 374 -1 - 1725 Chitinase (EC 3.2.1.14) - none -
fig|6666666.230104.peg.3173 CDS JNHN01000178.1 3379 2114 -1 - 1266 Predicted glucose transporter in maltodextrin utilization gene cluster Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.3174 CDS JNHN01000178.1 4176 3433 -3 - 744 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Sialic Acid Metabolism
fig|6666666.230104.peg.3175 CDS JNHN01000178.1 5128 4187 -1 - 942 Sugar kinase and transcription regulator (EC 2.7.1.-) - none -
fig|6666666.230104.peg.3176 CDS JNHN01000178.1 9119 5259 -2 - 3861 DNA-binding response regulator, AraC family - none -
fig|6666666.230104.peg.3177 CDS JNHN01000178.1 9317 12286 2 + 2970 Phosphoenolpyruvate synthase / Pyruvate phosphate dikinase - none -
fig|6666666.230104.peg.3178 CDS JNHN01000178.1 13358 12288 -2 - 1071 hypothetical protein - none -
fig|6666666.230104.peg.3179 CDS JNHN01000178.1 13426 14337 1 + 912 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.230104.peg.3180 CDS JNHN01000178.1 15526 14384 -1 - 1143 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) CBSS-296591.1.peg.2330;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230104.peg.3181 CDS JNHN01000178.1 16486 15614 -1 - 873 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230104.peg.3182 CDS JNHN01000178.1 16941 17123 3 + 183 hypothetical protein - none -
fig|6666666.230104.peg.3183 CDS JNHN01000178.1 17159 18106 2 + 948 Mobile element protein - none -
fig|6666666.230104.peg.3184 CDS JNHN01000178.1 19001 18507 -2 - 495 FIG00937838: hypothetical protein - none -
fig|6666666.230104.peg.3185 CDS JNHN01000178.1 19093 21153 1 + 2061 Polyphosphate kinase (EC 2.7.4.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism;
Polyphosphate;
Purine conversions
fig|6666666.230104.peg.3186 CDS JNHN01000178.1 23208 21181 -3 - 2028 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.3187 CDS JNHN01000178.1 26270 23238 -2 - 3033 hypothetical protein - none -
fig|6666666.230104.peg.3188 CDS JNHN01000178.1 27412 26267 -1 - 1146 Isoaspartyl dipeptidase (EC 3.4.19.5) @ Asp-X dipeptidase Protein degradation;
Protein degradation
fig|6666666.230104.peg.3189 CDS JNHN01000178.1 28654 27428 -1 - 1227 C4-dicarboxylate transporter - none -
fig|6666666.230104.peg.3190 CDS JNHN01000178.1 30738 28939 -3 - 1800 FIG00898178: hypothetical protein - none -
fig|6666666.230104.peg.3191 CDS JNHN01000178.1 33816 30781 -3 - 3036 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.3192 CDS JNHN01000178.1 35798 34113 -2 - 1686 Regulatory protein SusR Cellulosome
fig|6666666.230104.peg.3193 CDS JNHN01000178.1 36115 38427 1 + 2313 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.230104.peg.3194 CDS JNHN01000178.1 39901 38471 -1 - 1431 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.230104.peg.3195 CDS JNHN01000178.1 40031 40861 2 + 831 FIG00414501: hypothetical protein - none -
fig|6666666.230104.peg.3196 CDS JNHN01000178.1 41331 40930 -3 - 402 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.3197 CDS JNHN01000178.1 41418 43052 3 + 1635 ABC transporter ATP-binding protein uup - none -
fig|6666666.230104.peg.3198 CDS JNHN01000178.1 43136 44512 2 + 1377 Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4); Mercuric ion reductase (EC 1.16.1.1); PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase Mercuric reductase;
Mercuric reductase;
Mercury resistance operon;
TCA Cycle
fig|6666666.230104.peg.3199 CDS JNHN01000178.1 44551 44985 1 + 435 FIG00403272: hypothetical protein - none -
fig|6666666.230104.peg.3200 CDS JNHN01000178.1 45105 46325 3 + 1221 Cation efflux system protein - none -
fig|6666666.230104.peg.3201 CDS JNHN01000178.1 46494 49616 3 + 3123 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA Cobalt-zinc-cadmium resistance;
Cobalt-zinc-cadmium resistance
fig|6666666.230104.peg.3202 CDS JNHN01000178.1 49609 50835 1 + 1227 FIG00406501: hypothetical protein - none -
fig|6666666.230104.peg.3203 CDS JNHN01000178.1 52124 50892 -2 - 1233 proteinase inhibitor I4, serpin - none -
fig|6666666.230104.peg.3204 CDS JNHN01000178.1 53859 52402 -3 - 1458 tRNA and rRNA cytosine-C5-methylases - none -
fig|6666666.230104.peg.3205 CDS JNHN01000178.1 56373 53950 -3 - 2424 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.230104.peg.3206 CDS JNHN01000178.1 56809 56438 -1 - 372 FIG00410804: hypothetical protein - none -
fig|6666666.230104.peg.3207 CDS JNHN01000178.1 57035 57658 2 + 624 FIG00403458: hypothetical protein - none -
fig|6666666.230104.peg.3208 CDS JNHN01000178.1 57664 58200 1 + 537 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.230104.peg.3209 CDS JNHN01000178.1 58187 58513 2 + 327 FIG00403275: hypothetical protein - none -
fig|6666666.230104.peg.3210 CDS JNHN01000178.1 58576 59805 1 + 1230 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230104.peg.3211 CDS JNHN01000178.1 59880 60674 3 + 795 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis
fig|6666666.230104.peg.3212 CDS JNHN01000178.1 60720 61208 3 + 489 Dihydrofolate reductase (EC 1.5.1.3) Folate Biosynthesis
fig|6666666.230104.peg.3213 CDS JNHN01000178.1 61687 61211 -1 - 477 Transcriptional regulator, AsnC family - none -
fig|6666666.230104.peg.3214 CDS JNHN01000178.1 61927 63204 1 + 1278 Peptidase M64 - none -
fig|6666666.230104.peg.3215 CDS JNHN01000178.1 63292 63765 1 + 474 FIG00897901: hypothetical protein - none -
fig|6666666.230104.peg.3216 CDS JNHN01000178.1 64305 63841 -3 - 465 FIG00935740: hypothetical protein - none -
fig|6666666.230104.peg.3217 CDS JNHN01000178.1 64895 64305 -2 - 591 Biopolymer transport exbD protein. - none -
fig|6666666.230104.peg.3218 CDS JNHN01000178.1 65416 64931 -1 - 486 FIG00404263: hypothetical protein - none -
fig|6666666.230104.peg.3219 CDS JNHN01000178.1 66225 65422 -3 - 804 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.230104.peg.3220 CDS JNHN01000178.1 67332 66553 -3 - 780 Putative deoxyribonuclease YcfH YcfH
fig|6666666.230104.peg.3221 CDS JNHN01000178.1 68042 67341 -2 - 702 FIG00403149: hypothetical protein - none -
fig|6666666.230104.peg.3222 CDS JNHN01000178.1 69101 68061 -2 - 1041 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoinds for Quinones
fig|6666666.230104.peg.3223 CDS JNHN01000178.1 69802 69116 -1 - 687 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.230104.peg.3224 CDS JNHN01000178.1 70065 70760 3 + 696 Cytidylate kinase (EC 2.7.4.25) - none -
fig|6666666.230104.peg.3225 CDS JNHN01000178.1 70768 71634 1 + 867 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.230104.peg.3226 CDS JNHN01000178.1 71774 72754 2 + 981 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.230104.peg.3227 CDS JNHN01000178.1 73618 72815 -1 - 804 retinol dehydrogenase 13 (all-trans and 9-cis) - none -
fig|6666666.230104.peg.3228 CDS JNHN01000178.1 74914 73691 -1 - 1224 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - none -
fig|6666666.230104.peg.3229 CDS JNHN01000178.1 75757 74987 -1 - 771 3-oxo-5-alpha-steroid 4-dehydrogenase - none -
fig|6666666.230104.peg.3230 CDS JNHN01000178.1 75770 75892 2 + 123 hypothetical protein - none -
fig|6666666.230104.peg.3231 CDS JNHN01000178.1 77347 76004 -1 - 1344 Citrate synthase (si) (EC 2.3.3.1) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.230104.peg.3232 CDS JNHN01000178.1 78520 77360 -1 - 1161 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) TCA Cycle
fig|6666666.230104.peg.3233 CDS JNHN01000178.1 80767 78524 -1 - 2244 Aconitate hydratase (EC 4.2.1.3) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.230104.peg.3234 CDS JNHN01000178.1 80882 82795 2 + 1914 putative helicase - none -
fig|6666666.230104.peg.3235 CDS JNHN01000178.1 83900 82857 -2 - 1044 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.230104.peg.3236 CDS JNHN01000178.1 84703 83951 -1 - 753 Acyl-ACP thioesterase - none -
fig|6666666.230104.peg.3237 CDS JNHN01000178.1 85260 84700 -3 - 561 Acetolactate synthase small subunit (EC 2.2.1.6) Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.230104.peg.3238 CDS JNHN01000178.1 87044 85293 -2 - 1752 Acetolactate synthase large subunit (EC 2.2.1.6) Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.230104.peg.3239 CDS JNHN01000178.1 88974 87136 -3 - 1839 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.230104.peg.3240 CDS JNHN01000178.1 89429 90001 2 + 573 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.230104.peg.3241 CDS JNHN01000178.1 91386 90109 -3 - 1278 Putative inner membrane protein - none -
fig|6666666.230104.peg.3242 CDS JNHN01000178.1 92699 91506 -2 - 1194 FIG00405746: hypothetical protein - none -
fig|6666666.230104.peg.3243 CDS JNHN01000178.1 93074 94150 2 + 1077 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.230104.peg.3244 CDS JNHN01000178.1 94160 95515 2 + 1356 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.230104.peg.3245 CDS JNHN01000178.1 95531 96610 2 + 1080 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.230104.peg.3246 CDS JNHN01000178.1 96625 97179 1 + 555 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.230104.peg.3247 CDS JNHN01000178.1 99380 97191 -2 - 2190 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.230104.peg.3248 CDS JNHN01000178.1 101841 99694 -3 - 2148 Methylmalonyl-CoA mutase (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis);
Propionyl-CoA to Succinyl-CoA Module;
Serine-glyoxylate cycle
fig|6666666.230104.peg.3249 CDS JNHN01000178.1 103786 101888 -1 - 1899 Methylmalonyl-CoA mutase (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis);
Propionyl-CoA to Succinyl-CoA Module;
Serine-glyoxylate cycle
fig|6666666.230104.peg.3250 CDS JNHN01000178.1 104135 105718 2 + 1584 putative membrane protein - none -
fig|6666666.230104.peg.3251 CDS JNHN01000178.1 106436 105795 -2 - 642 Cytidylate kinase (EC 2.7.4.25) - none -
fig|6666666.230104.peg.3252 CDS JNHN01000178.1 107881 106529 -1 - 1353 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230104.peg.3253 CDS JNHN01000178.1 108139 108546 1 + 408 putative non-specific DNA binding protein - none -
fig|6666666.230104.peg.3254 CDS JNHN01000178.1 108641 110371 2 + 1731 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.230104.peg.3255 CDS JNHN01000178.1 110463 111458 3 + 996 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230104.peg.3256 CDS JNHN01000178.1 111507 112844 3 + 1338 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.230104.peg.3257 CDS JNHN01000178.1 112863 113729 3 + 867 Beta-phosphoglucomutase (EC 5.4.2.6) Maltose and Maltodextrin Utilization;
Trehalose Uptake and Utilization
fig|6666666.230104.peg.3258 CDS JNHN01000178.1 114417 113785 -3 - 633 FIG00936531: hypothetical protein - none -
fig|6666666.230104.peg.3259 CDS JNHN01000178.1 114629 115051 2 + 423 FIG00638667: hypothetical protein - none -
fig|6666666.230104.peg.3260 CDS JNHN01000178.1 116352 115471 -3 - 882 FIG00406423: hypothetical protein - none -
fig|6666666.230104.peg.3261 CDS JNHN01000178.1 117321 116461 -3 - 861 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.230104.peg.3262 CDS JNHN01000178.1 117855 117382 -3 - 474 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases
fig|6666666.230104.peg.3263 CDS JNHN01000178.1 118503 117862 -3 - 642 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase
fig|6666666.230104.peg.3264 CDS JNHN01000178.1 118910 119947 2 + 1038 Aspartate--ammonia ligase (EC 6.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230104.peg.3265 CDS JNHN01000178.1 120055 120717 1 + 663 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.230104.peg.3266 CDS JNHN01000178.1 123366 120721 -3 - 2646 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor ECSIG4-SIG7
fig|6666666.230104.peg.3267 CDS JNHN01000178.1 124114 123578 -1 - 537 HDIG domain protein - none -
fig|6666666.230104.peg.3268 CDS JNHN01000178.1 125875 124142 -1 - 1734 Polymyxin resistance protein ArnT, undecaprenyl phosphate-alpha-L-Ara4N transferase; Melittin resistance protein PqaB - none -
fig|6666666.230104.peg.3269 CDS JNHN01000178.1 126063 126440 3 + 378 FIG00407687: hypothetical protein - none -
fig|6666666.230104.peg.3270 CDS JNHN01000178.1 126492 127463 3 + 972 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230104.peg.3271 CDS JNHN01000178.1 127822 128109 1 + 288 putative membrane protein - none -
fig|6666666.230104.peg.3272 CDS JNHN01000178.1 128210 128091 -2 - 120 hypothetical protein - none -
fig|6666666.230104.peg.3273 CDS JNHN01000178.1 128420 128848 2 + 429 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.230104.peg.3274 CDS JNHN01000178.1 130106 130234 2 + 129 hypothetical protein - none -
fig|6666666.230104.peg.3275 CDS JNHN01000178.1 131200 130247 -1 - 954 putative sodium-dependent transporter - none -
fig|6666666.230104.peg.3276 CDS JNHN01000178.1 131401 132636 1 + 1236 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230104.peg.3277 CDS JNHN01000178.1 132650 133543 2 + 894 Mce4/Rv3499c/MTV023.06c protein - none -
fig|6666666.230104.peg.3278 CDS JNHN01000178.1 133895 135280 2 + 1386 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.230104.peg.3279 CDS JNHN01000178.1 136133 135366 -2 - 768 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.230104.peg.3280 CDS JNHN01000178.1 136518 139055 3 + 2538 Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) Inteins;
Ribonucleotide reduction
fig|6666666.230104.peg.3281 CDS JNHN01000178.1 139187 141880 2 + 2694 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.3282 CDS JNHN01000178.1 142401 142520 3 + 120 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.230104.peg.3283 CDS JNHN01000178.1 143670 143152 -3 - 519 Methylglyoxal synthase (EC 4.2.3.3) Methylglyoxal Metabolism
fig|6666666.230104.peg.3284 CDS JNHN01000178.1 144734 143718 -2 - 1017 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230104.peg.3285 CDS JNHN01000178.1 145626 144727 -3 - 900 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) - none -
fig|6666666.230104.peg.3286 CDS JNHN01000178.1 146997 145681 -3 - 1317 tRNA-t(6)A37 methylthiotransferase Heat shock dnaK gene cluster extended;
Methylthiotransferases
fig|6666666.230104.peg.3287 CDS JNHN01000178.1 147083 148756 2 + 1674 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.230104.peg.3288 CDS JNHN01000178.1 148887 149114 3 + 228 FIG00405659: hypothetical protein - none -
fig|6666666.230104.peg.3289 CDS JNHN01000178.1 149508 149693 3 + 186 RNA binding protein - none -
fig|6666666.230104.peg.3290 CDS JNHN01000178.1 150407 149958 -2 - 450 LSU ribosomal protein L9p - none -
fig|6666666.230104.peg.3291 CDS JNHN01000178.1 150695 150423 -2 - 273 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent - none -
fig|6666666.230104.peg.3292 CDS JNHN01000178.1 151042 150698 -1 - 345 SSU ribosomal protein S6p - none -
fig|6666666.230104.peg.3293 CDS JNHN01000178.1 151202 151648 2 + 447 Transcriptional regulator, MarR family - none -
fig|6666666.230104.peg.3294 CDS JNHN01000178.1 151849 152025 1 + 177 FIG00407300: hypothetical protein - none -
fig|6666666.230104.peg.3295 CDS JNHN01000178.1 152816 152115 -2 - 702 Transcriptional regulatory protein rprY - none -
fig|6666666.230104.peg.3296 CDS JNHN01000178.1 154366 152822 -1 - 1545 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.230104.peg.3297 CDS JNHN01000178.1 156823 154667 -1 - 2157 Translation elongation factor G-related protein - none -
fig|6666666.230104.peg.3298 CDS JNHN01000178.1 157212 158843 3 + 1632 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.230104.peg.3299 CDS JNHN01000178.1 158991 162311 3 + 3321 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230104.peg.3300 CDS JNHN01000178.1 163607 162426 -2 - 1182 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230104.peg.3301 CDS JNHN01000178.1 163770 164342 3 + 573 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.230104.peg.3302 CDS JNHN01000178.1 165453 164302 -3 - 1152 Beta-glucanase - none -
fig|6666666.230104.peg.3303 CDS JNHN01000178.1 167621 165552 -2 - 2070 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.3304 CDS JNHN01000178.1 170953 167633 -1 - 3321 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.3305 CDS JNHN01000178.1 173753 171078 -2 - 2676 DNA-binding response regulator, AraC family - none -
fig|6666666.230104.peg.3306 CDS JNHN01000179.1 2570 1056 -2 - 1515 Optional hypothetical component of the B12 transporter BtuN Coenzyme B12 biosynthesis
fig|6666666.230104.peg.3307 CDS JNHN01000179.1 3587 2640 -2 - 948 Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230104.peg.3308 CDS JNHN01000179.1 4909 3605 -1 - 1305 FIG00897953: hypothetical protein - none -
fig|6666666.230104.peg.3309 CDS JNHN01000179.1 7291 4931 -1 - 2361 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.3310 CDS JNHN01000179.1 7802 7632 -2 - 171 hypothetical protein - none -
fig|6666666.230104.peg.3311 CDS JNHN01000179.1 8004 9515 3 + 1512 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) Fatty Acid Biosynthesis FASII
fig|6666666.230104.peg.3312 CDS JNHN01000179.1 9561 10076 3 + 516 Biotin carboxyl carrier protein of acetyl-CoA carboxylase; Biotin carboxyl carrier protein Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.230104.peg.3313 CDS JNHN01000179.1 10131 11663 3 + 1533 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Colicin V and Bacteriocin Production Cluster;
Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.230104.peg.3314 CDS JNHN01000179.1 11791 13476 1 + 1686 Predicted cobalt transporter in Bacteroides_Porphyromonas Coenzyme B12 biosynthesis
fig|6666666.230104.peg.3315 CDS JNHN01000179.1 14312 13572 -2 - 741 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230104.peg.3316 CDS JNHN01000179.1 15768 14338 -3 - 1431 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases - none -
fig|6666666.230104.peg.3317 CDS JNHN01000179.1 15863 17272 2 + 1410 Cobyrinic acid A,C-diamide synthase Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230104.peg.3318 CDS JNHN01000179.1 17323 19041 1 + 1719 FIG00414938: hypothetical protein - none -
fig|6666666.230104.peg.3319 CDS JNHN01000179.1 19179 19382 3 + 204 FIG00409255: hypothetical protein - none -
fig|6666666.230104.peg.3320 CDS JNHN01000179.1 19451 19975 2 + 525 hypothetical protein - none -
fig|6666666.230104.peg.3321 CDS JNHN01000179.1 19979 20548 2 + 570 ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17) - none -
fig|6666666.230104.peg.3322 CDS JNHN01000179.1 21764 20580 -2 - 1185 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global
fig|6666666.230104.peg.3323 CDS JNHN01000179.1 24394 22004 -1 - 2391 ABC-type multidrug transport system, permease component - none -
fig|6666666.230104.peg.3324 CDS JNHN01000179.1 25386 24391 -3 - 996 FIG00896745: hypothetical protein - none -
fig|6666666.230104.peg.3325 CDS JNHN01000179.1 26826 25399 -3 - 1428 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.230104.peg.3326 CDS JNHN01000179.1 27025 28521 1 + 1497 Cobyric acid synthase (EC 6.3.5.10) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230104.peg.3327 CDS JNHN01000179.1 28514 29548 2 + 1035 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230104.peg.3328 CDS JNHN01000179.1 29552 30520 2 + 969 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230104.peg.3329 CDS JNHN01000179.1 30629 32509 2 + 1881 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.3330 CDS JNHN01000179.1 32506 34467 1 + 1962 FIG00412932: hypothetical protein - none -
fig|6666666.230104.peg.3331 CDS JNHN01000179.1 34939 34448 -1 - 492 Alpha-ribazole-5@1-phosphate phosphatase (EC 3.1.3.73) CBSS-216591.1.peg.168;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Phosphoglycerate mutase protein family
fig|6666666.230104.peg.3332 CDS JNHN01000179.1 35735 35004 -2 - 732 Cobalamin synthase (EC 2.7.8.26) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230104.peg.3333 CDS JNHN01000179.1 36786 35749 -3 - 1038 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230104.peg.3334 CDS JNHN01000179.1 37338 36817 -3 - 522 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230104.peg.3335 CDS JNHN01000179.1 37888 38634 1 + 747 Transcriptional regulator, GntR family - none -
fig|6666666.230104.peg.3336 CDS JNHN01000179.1 38646 41114 3 + 2469 Predicted sialic acid transporter Sialic Acid Metabolism
fig|6666666.230104.peg.3337 CDS JNHN01000179.1 41230 42069 1 + 840 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230104.peg.3338 CDS JNHN01000179.1 42404 45415 2 + 3012 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.3339 CDS JNHN01000179.1 45447 46940 3 + 1494 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.3340 CDS JNHN01000179.1 46954 48585 1 + 1632 Sialidase (EC 3.2.1.18) Galactosylceramide and Sulfatide metabolism;
Sialic Acid Metabolism
fig|6666666.230104.peg.3341 CDS JNHN01000179.1 48614 49282 2 + 669 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.230104.peg.3342 CDS JNHN01000179.1 49288 50373 1 + 1086 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.3343 CDS JNHN01000179.1 50343 51449 3 + 1107 putative secreted protein - none -
fig|6666666.230104.peg.3344 CDS JNHN01000179.1 51497 52054 2 + 558 probable beta-D-galactosidase Galactosylceramide and Sulfatide metabolism
fig|6666666.230104.peg.3345 CDS JNHN01000179.1 52170 53663 3 + 1494 Prolyl-tRNA synthetase (EC 6.1.1.15), archaeal/eukaryal type tRNA aminoacylation, Pro
fig|6666666.230104.peg.3346 CDS JNHN01000179.1 53817 53704 -3 - 114 hypothetical protein - none -
fig|6666666.230104.peg.3347 CDS JNHN01000179.1 54092 53832 -2 - 261 hypothetical protein - none -
fig|6666666.230104.peg.3348 CDS JNHN01000179.1 54391 54158 -1 - 234 hypothetical protein - none -
fig|6666666.230104.peg.3349 CDS JNHN01000179.1 54568 54750 1 + 183 hypothetical protein - none -
fig|6666666.230104.peg.3350 CDS JNHN01000179.1 55021 54875 -1 - 147 hypothetical protein - none -
fig|6666666.230104.peg.3351 CDS JNHN01000179.1 54980 56110 2 + 1131 FIG00898796: hypothetical protein - none -
fig|6666666.230104.peg.3352 CDS JNHN01000179.1 56772 56263 -3 - 510 FIG00403032: hypothetical protein - none -
fig|6666666.230104.peg.3353 CDS JNHN01000179.1 56821 57027 1 + 207 hypothetical protein - none -
fig|6666666.230104.peg.3354 CDS JNHN01000179.1 57050 57310 2 + 261 FIG00407477: hypothetical protein - none -
fig|6666666.230104.peg.3355 CDS JNHN01000179.1 59569 57440 -1 - 2130 putative helicase - none -
fig|6666666.230104.peg.3356 CDS JNHN01000179.1 60015 59692 -3 - 324 hypothetical protein - none -
fig|6666666.230104.peg.3357 CDS JNHN01000179.1 60755 61282 2 + 528 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230104.peg.3358 CDS JNHN01000179.1 61338 62237 3 + 900 Lipopolysaccharide core biosynthesis protein RfaS LOS core oligosaccharide biosynthesis
fig|6666666.230104.peg.3359 CDS JNHN01000179.1 62249 63649 2 + 1401 Polysaccharide biosynthesis protein - none -
fig|6666666.230104.peg.3360 CDS JNHN01000179.1 63651 64832 3 + 1182 capsular polysaccharide biosynthesis protein Rhamnose containing glycans
fig|6666666.230104.peg.3361 CDS JNHN01000179.1 64848 65912 3 + 1065 Glycosyl transferase, group 1 family protein - none -
fig|6666666.230104.peg.3362 CDS JNHN01000179.1 65925 66932 3 + 1008 Beta-1,3-glucosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.230104.peg.3363 CDS JNHN01000179.1 67000 68490 1 + 1491 hypothetical protein - none -
fig|6666666.230104.peg.3364 CDS JNHN01000179.1 68519 69487 2 + 969 UDP-glucose 4-epimerase (EC 5.1.3.2) CBSS-296591.1.peg.2330;
Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.230104.peg.3365 CDS JNHN01000179.1 69555 70820 3 + 1266 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.230104.peg.3366 CDS JNHN01000179.1 70774 71952 1 + 1179 Lipid carrier : UDP-N-acetylgalactosaminyltransferase (EC 2.4.1.-) / Alpha-1,3-N-acetylgalactosamine transferase PglA (EC 2.4.1.-); Putative glycosyltransferase CBSS-296591.1.peg.2330;
CBSS-296591.1.peg.2330;
CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria;
N-linked Glycosylation in Bacteria
fig|6666666.230104.peg.3367 CDS JNHN01000179.1 71987 72178 2 + 192 hypothetical protein - none -
fig|6666666.230104.peg.3368 CDS JNHN01000179.1 72175 72495 1 + 321 hypothetical protein - none -
fig|6666666.230104.peg.3369 CDS JNHN01000179.1 72538 73485 1 + 948 UDP-glucose 4-epimerase (EC 5.1.3.2) CBSS-296591.1.peg.2330;
Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.230104.peg.3370 CDS JNHN01000179.1 73535 74482 2 + 948 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230104.peg.3371 CDS JNHN01000179.1 76954 74855 -1 - 2100 Prolyl oligopeptidase family protein - none -
fig|6666666.230104.peg.3372 CDS JNHN01000179.1 78281 77016 -2 - 1266 BexA, multidrug efflux pump - none -
fig|6666666.230104.peg.3373 CDS JNHN01000179.1 80303 78450 -2 - 1854 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.230104.peg.3374 CDS JNHN01000179.1 81954 80335 -3 - 1620 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster
fig|6666666.230104.peg.3375 CDS JNHN01000179.1 82225 83664 1 + 1440 FIG00897178: hypothetical protein - none -
fig|6666666.230104.peg.3376 CDS JNHN01000179.1 83925 84314 3 + 390 FIG00937594: hypothetical protein - none -
fig|6666666.230104.peg.3377 CDS JNHN01000179.1 84352 85254 1 + 903 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230104.peg.3378 CDS JNHN01000179.1 85315 86652 1 + 1338 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230104.peg.3379 CDS JNHN01000179.1 86659 87651 1 + 993 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230104.peg.3380 CDS JNHN01000179.1 87648 88313 3 + 666 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230104.peg.3381 CDS JNHN01000179.1 88351 88914 1 + 564 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230104.peg.3382 CDS JNHN01000179.1 89002 89586 1 + 585 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230104.peg.3383 CDS JNHN01000179.1 89718 90752 3 + 1035 UDP-glucose 4-epimerase (EC 5.1.3.2) CBSS-296591.1.peg.2330;
Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.230104.peg.3384 CDS JNHN01000179.1 91363 92898 1 + 1536 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.230104.peg.3385 CDS JNHN01000179.1 92912 93166 2 + 255 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.230104.peg.3386 CDS JNHN01000179.1 93250 93627 1 + 378 FIG048548: ATP synthase protein I2 - none -
fig|6666666.230104.peg.3387 CDS JNHN01000179.1 93611 94681 2 + 1071 ATP synthase F0 sector subunit a - none -
fig|6666666.230104.peg.3388 CDS JNHN01000179.1 94738 94995 1 + 258 ATP synthase F0 sector subunit c - none -
fig|6666666.230104.peg.3389 CDS JNHN01000179.1 95091 95597 3 + 507 ATP synthase F0 sector subunit b - none -
fig|6666666.230104.peg.3390 CDS JNHN01000179.1 95630 96169 2 + 540 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.230104.peg.3391 CDS JNHN01000179.1 96300 97886 3 + 1587 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.230104.peg.3392 CDS JNHN01000179.1 98008 98898 1 + 891 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.230104.peg.3393 CDS JNHN01000179.1 99066 101282 3 + 2217 DNA repair and recombination protein, putative helicase - none -
fig|6666666.230104.peg.3394 CDS JNHN01000179.1 102216 101314 -3 - 903 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230104.peg.3395 CDS JNHN01000179.1 102838 102242 -1 - 597 FIG00404985: hypothetical protein - none -
fig|6666666.230104.peg.3396 CDS JNHN01000179.1 103745 102939 -2 - 807 FIG00408616: hypothetical protein - none -
fig|6666666.230104.peg.3397 CDS JNHN01000179.1 104486 103767 -2 - 720 Two-component system response regulator - none -
fig|6666666.230104.peg.3398 CDS JNHN01000179.1 106131 104560 -3 - 1572 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.230104.peg.3399 CDS JNHN01000179.1 106333 108486 1 + 2154 FIG00406183: hypothetical protein - none -
fig|6666666.230104.peg.3400 CDS JNHN01000179.1 108602 110272 2 + 1671 Formate--tetrahydrofolate ligase (EC 6.3.4.3) One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.230104.peg.3401 CDS JNHN01000179.1 111672 110392 -3 - 1281 Serine hydroxymethyltransferase (EC 2.1.2.1) Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.230104.peg.3402 CDS JNHN01000179.1 112545 111775 -3 - 771 FIG00897396: hypothetical protein - none -
fig|6666666.230104.peg.3403 CDS JNHN01000179.1 113135 112569 -2 - 567 Flavoredoxin - none -
fig|6666666.230104.peg.3404 CDS JNHN01000179.1 113596 113132 -1 - 465 Aspartate carbamoyltransferase regulatory chain (PyrI) De Novo Pyrimidine Synthesis
fig|6666666.230104.peg.3405 CDS JNHN01000179.1 114570 113623 -3 - 948 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.230104.peg.3406 CDS JNHN01000179.1 115182 117512 3 + 2331 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.230104.peg.3407 CDS JNHN01000179.1 117584 117949 2 + 366 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.230104.peg.3408 CDS JNHN01000179.1 118025 118786 2 + 762 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) - none -
fig|6666666.230104.peg.3409 CDS JNHN01000179.1 118799 120088 2 + 1290 ZINC PROTEASE (EC 3.4.99.-) - none -
fig|6666666.230104.peg.3410 CDS JNHN01000179.1 120163 121326 1 + 1164 FIG01057005: hypothetical protein - none -
fig|6666666.230104.peg.3411 CDS JNHN01000179.1 122357 121419 -2 - 939 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
De Novo Purine Biosynthesis;
Pentose phosphate pathway
fig|6666666.230104.peg.3412 CDS JNHN01000179.1 122563 126828 1 + 4266 putative two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.3413 CDS JNHN01000179.1 126832 127560 1 + 729 hypothetical protein - none -
fig|6666666.230104.peg.3414 CDS JNHN01000179.1 127568 129004 2 + 1437 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.230104.peg.3415 CDS JNHN01000179.1 129683 128979 -2 - 705 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.230104.peg.3416 CDS JNHN01000179.1 131217 130378 -3 - 840 Esterase - none -
fig|6666666.230104.peg.3417 CDS JNHN01000179.1 131729 131529 -2 - 201 FIG00413734: hypothetical protein - none -
fig|6666666.230104.peg.3418 CDS JNHN01000179.1 131972 132685 2 + 714 FIG00414131: hypothetical protein - none -
fig|6666666.230104.peg.3419 CDS JNHN01000179.1 134767 132758 -1 - 2010 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.230104.peg.3420 CDS JNHN01000179.1 135245 134799 -2 - 447 probable beta-D-galactosidase Galactosylceramide and Sulfatide metabolism
fig|6666666.230104.peg.3421 CDS JNHN01000179.1 135945 135280 -3 - 666 FIG00403581: hypothetical protein - none -
fig|6666666.230104.peg.3422 CDS JNHN01000179.1 136281 136511 3 + 231 FIG00412253: hypothetical protein - none -
fig|6666666.230104.peg.3423 CDS JNHN01000179.1 138313 136616 -1 - 1698 Alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.230104.peg.3424 CDS JNHN01000179.1 139155 138346 -3 - 810 UPF0028 protein YchK Broadly distributed proteins not in subsystems
fig|6666666.230104.peg.3425 CDS JNHN01000179.1 139950 139441 -3 - 510 hypothetical protein - none -
fig|6666666.230104.peg.3426 CDS JNHN01000179.1 141136 140015 -1 - 1122 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.230104.peg.3427 CDS JNHN01000179.1 141306 141953 3 + 648 hypothetical protein - none -
fig|6666666.230104.peg.3428 CDS JNHN01000179.1 142889 142062 -2 - 828 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.230104.peg.3429 CDS JNHN01000179.1 143513 142911 -2 - 603 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Thiamin biosynthesis
fig|6666666.230104.peg.3430 CDS JNHN01000179.1 144266 143532 -2 - 735 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.230104.peg.3431 CDS JNHN01000179.1 145396 144263 -1 - 1134 2-iminoacetate synthase (ThiH) (EC 4.1.99.19) - none -
fig|6666666.230104.peg.3432 CDS JNHN01000179.1 147099 145417 -3 - 1683 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) - none -
fig|6666666.230104.peg.3433 CDS JNHN01000179.1 148055 147264 -2 - 792 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.230104.peg.3434 CDS JNHN01000179.1 148687 148067 -1 - 621 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Thiamin biosynthesis
fig|6666666.230104.peg.3435 CDS JNHN01000179.1 149007 148723 -3 - 285 Sulfur carrier protein ThiS Thiamin biosynthesis
fig|6666666.230104.peg.3436 CDS JNHN01000179.1 149707 149156 -1 - 552 FIG00403486: hypothetical protein - none -
fig|6666666.230104.peg.3437 CDS JNHN01000179.1 150693 149806 -3 - 888 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.230104.peg.3438 CDS JNHN01000179.1 150777 150905 3 + 129 hypothetical protein - none -
fig|6666666.230104.peg.3439 CDS JNHN01000179.1 151092 151823 3 + 732 Hypothetical Nudix-like regulator - none -
fig|6666666.230104.peg.3440 CDS JNHN01000179.1 151871 153349 2 + 1479 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.230104.peg.3441 CDS JNHN01000179.1 153455 154771 2 + 1317 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.230104.peg.3442 CDS JNHN01000179.1 154886 156373 2 + 1488 D-xylose proton-symporter XylE Xylose utilization
fig|6666666.230104.peg.3443 CDS JNHN01000179.1 156566 158098 2 + 1533 Aliphatic amidase AmiE (EC 3.5.1.4) - none -
fig|6666666.230104.peg.3444 CDS JNHN01000179.1 158095 158262 1 + 168 hypothetical protein - none -
fig|6666666.230104.peg.3445 CDS JNHN01000179.1 158316 159122 3 + 807 hypothetical protein - none -
fig|6666666.230104.peg.3446 CDS JNHN01000179.1 160269 159397 -3 - 873 DNA modification methyltransferase (EC 2.1.1.-) - none -
fig|6666666.230104.peg.3447 CDS JNHN01000179.1 160787 160266 -2 - 522 hypothetical protein - none -
fig|6666666.230104.peg.3448 CDS JNHN01000179.1 161656 160796 -1 - 861 Type II restriction enzyme DpnII (EC 3.1.21.4) (Endonuclease DpnII) (R.DpnII) - none -
fig|6666666.230104.peg.3449 CDS JNHN01000179.1 162577 161663 -1 - 915 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.230104.peg.3450 CDS JNHN01000179.1 162897 166385 3 + 3489 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.230104.peg.3451 CDS JNHN01000179.1 166419 166799 3 + 381 DnaK suppressor protein, putative - none -
fig|6666666.230104.peg.3452 CDS JNHN01000179.1 166802 167434 2 + 633 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.230104.peg.3453 CDS JNHN01000179.1 167431 168357 1 + 927 FIG00405766: hypothetical protein - none -
fig|6666666.230104.peg.3454 CDS JNHN01000179.1 169398 168637 -3 - 762 tRNA (guanosine(18)-2@1-O)-methyltransferase (EC 2.1.1.34) RNA methylation;
tRNA modification Bacteria
fig|6666666.230104.peg.3455 CDS JNHN01000179.1 169542 171851 3 + 2310 FIG00898528: hypothetical protein - none -
fig|6666666.230104.peg.3456 CDS JNHN01000179.1 172488 171928 -3 - 561 FIG00406097: hypothetical protein - none -
fig|6666666.230104.peg.3457 CDS JNHN01000179.1 173064 172621 -3 - 444 DoxX family protein - none -
fig|6666666.230104.peg.3458 CDS JNHN01000179.1 174389 173115 -2 - 1275 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.230104.peg.3459 CDS JNHN01000179.1 174649 175803 1 + 1155 Outer membrane protein/protective antigen OMA87 - none -
fig|6666666.230104.peg.3460 CDS JNHN01000179.1 175790 177490 2 + 1701 Integral membrane protein - none -
fig|6666666.230104.peg.3461 CDS JNHN01000179.1 177931 177515 -1 - 417 FIG00407892: hypothetical protein - none -
fig|6666666.230104.peg.3462 CDS JNHN01000179.1 179309 177933 -2 - 1377 Fe-S oxidoreductase - none -
fig|6666666.230104.peg.3463 CDS JNHN01000179.1 180851 179355 -2 - 1497 Ferredoxin-type protein NapG (periplasmic nitrate reductase) Nitrate and nitrite ammonification
fig|6666666.230104.peg.3464 CDS JNHN01000179.1 180802 180951 1 + 150 hypothetical protein - none -
fig|6666666.230104.peg.3465 CDS JNHN01000179.1 182842 181052 -1 - 1791 Glucoamylase (EC 3.2.1.3) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.230104.peg.3466 CDS JNHN01000179.1 185136 182848 -3 - 2289 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) / Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis;
Trehalose Biosynthesis
fig|6666666.230104.peg.3467 CDS JNHN01000179.1 185125 185259 1 + 135 hypothetical protein - none -
fig|6666666.230104.peg.3468 CDS JNHN01000179.1 185800 185243 -1 - 558 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.230104.peg.3469 CDS JNHN01000179.1 185909 185793 -2 - 117 hypothetical protein - none -
fig|6666666.230104.peg.3470 CDS JNHN01000179.1 187094 186291 -2 - 804 metallo-beta-lactamase family protein - none -
fig|6666666.230104.peg.3471 CDS JNHN01000179.1 188559 187177 -3 - 1383 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.230104.peg.3472 CDS JNHN01000179.1 188767 189456 1 + 690 Hydrolase, haloacid delahogenase-like family - none -
fig|6666666.230104.peg.3473 CDS JNHN01000179.1 190905 189499 -3 - 1407 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230104.peg.3474 CDS JNHN01000179.1 191139 192200 3 + 1062 hypothetical protein - none -
fig|6666666.230104.peg.3475 CDS JNHN01000179.1 192240 192380 3 + 141 Altronate oxidoreductase (EC 1.1.1.58) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230104.peg.3476 CDS JNHN01000179.1 192473 193636 2 + 1164 Mobile element protein - none -
fig|6666666.230104.peg.3477 CDS JNHN01000179.1 193740 195017 3 + 1278 Altronate oxidoreductase (EC 1.1.1.58) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230104.peg.3478 CDS JNHN01000179.1 195659 195126 -2 - 534 FHA domain protein - none -
fig|6666666.230104.peg.3479 CDS JNHN01000179.1 196864 195710 -1 - 1155 FIG00403302: hypothetical protein - none -
fig|6666666.230104.peg.3480 CDS JNHN01000179.1 197098 198516 1 + 1419 FIG00403031: hypothetical protein - none -
fig|6666666.230104.peg.3481 CDS JNHN01000179.1 198521 199069 2 + 549 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Capsular heptose biosynthesis;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230104.peg.3482 CDS JNHN01000179.1 199073 200386 2 + 1314 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.230104.peg.3483 CDS JNHN01000179.1 200424 201224 3 + 801 FIG00406495: hypothetical protein - none -
fig|6666666.230104.peg.3484 CDS JNHN01000179.1 202552 201266 -1 - 1287 ATP-dependent RNA helicase - none -
fig|6666666.230104.peg.3485 CDS JNHN01000179.1 203910 202681 -3 - 1230 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.230104.peg.3486 CDS JNHN01000179.1 204187 204687 1 + 501 FIG00402940: hypothetical protein - none -
fig|6666666.230104.peg.3487 CDS JNHN01000179.1 206097 204961 -3 - 1137 membrane protein, putative - none -
fig|6666666.230104.peg.3488 CDS JNHN01000179.1 207224 206094 -2 - 1131 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230104.peg.3489 CDS JNHN01000179.1 209701 207221 -1 - 2481 ATP-dependent protease La (EC 3.4.21.53) Type I Proteolysis in bacteria, ATP-dependent
fig|6666666.230104.peg.3490 CDS JNHN01000179.1 209873 210580 2 + 708 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.230104.peg.3491 CDS JNHN01000179.1 211768 210803 -1 - 966 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.3492 CDS JNHN01000179.1 213216 211765 -3 - 1452 Two-component system response regulator - none -
fig|6666666.230104.peg.3493 CDS JNHN01000179.1 213357 214844 3 + 1488 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.230104.peg.3494 CDS JNHN01000179.1 215014 216264 1 + 1251 ABC transporter permease - none -
fig|6666666.230104.peg.3495 CDS JNHN01000179.1 216276 218681 3 + 2406 Probable ABC transporter permease - none -
fig|6666666.230104.peg.3496 CDS JNHN01000179.1 218693 221068 2 + 2376 probable ABC transporter permease - none -
fig|6666666.230104.peg.3497 CDS JNHN01000179.1 221087 223486 2 + 2400 ABC transporter, permease protein - none -
fig|6666666.230104.peg.3498 CDS JNHN01000179.1 223618 225867 1 + 2250 putative ABC transporter permease - none -
fig|6666666.230104.peg.3499 CDS JNHN01000179.1 225905 226579 2 + 675 ABC transporter ATP-binding protein YvcR - none -
fig|6666666.230104.peg.3500 CDS JNHN01000179.1 226703 226581 -2 - 123 hypothetical protein - none -
fig|6666666.230104.peg.3501 CDS JNHN01000179.1 226739 227026 2 + 288 putative ryanodine receptor - none -
fig|6666666.230104.peg.3502 CDS JNHN01000179.1 227198 227446 2 + 249 hypothetical protein - none -
fig|6666666.230104.peg.3503 CDS JNHN01000179.1 227568 229478 3 + 1911 hypothetical protein - none -
fig|6666666.230104.peg.3504 CDS JNHN01000179.1 229559 233851 2 + 4293 hypothetical protein - none -
fig|6666666.230104.peg.3505 CDS JNHN01000179.1 234515 233829 -2 - 687 FIG00405116: hypothetical protein - none -
fig|6666666.230104.peg.3506 CDS JNHN01000179.1 235667 234861 -2 - 807 putative lipoprotein - none -
fig|6666666.230104.peg.3507 CDS JNHN01000179.1 236954 235767 -2 - 1188 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.230104.peg.3508 CDS JNHN01000179.1 236953 237165 1 + 213 hypothetical protein - none -
fig|6666666.230104.peg.3509 CDS JNHN01000179.1 237162 238205 3 + 1044 Transcription regulator [contains diacylglycerol kinase catalytic domain] - none -
fig|6666666.230104.peg.3510 CDS JNHN01000179.1 238338 240095 3 + 1758 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.230104.peg.3511 CDS JNHN01000179.1 240117 240497 3 + 381 FIG00406468: hypothetical protein - none -
fig|6666666.230104.peg.3512 CDS JNHN01000179.1 241411 240524 -1 - 888 N-carbamoylputrescine amidase (3.5.1.53) Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.230104.peg.3513 CDS JNHN01000179.1 242567 241452 -2 - 1116 Agmatine deiminase (EC 3.5.3.12) Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.230104.peg.3514 CDS JNHN01000179.1 243242 242706 -2 - 537 Ferredoxin domain containing protein - none -
fig|6666666.230104.peg.3515 CDS JNHN01000179.1 243335 243958 2 + 624 YbbL ABC transporter ATP-binding protein Broadly distributed proteins not in subsystems
fig|6666666.230104.peg.3516 CDS JNHN01000179.1 243970 244779 1 + 810 YbbM seven transmembrane helix protein Broadly distributed proteins not in subsystems
fig|6666666.230104.peg.3517 CDS JNHN01000179.1 245192 244782 -2 - 411 FIG00402962: hypothetical protein - none -
fig|6666666.230104.peg.3518 CDS JNHN01000179.1 245993 245217 -2 - 777 FIG00412714: hypothetical protein - none -
fig|6666666.230104.peg.3519 CDS JNHN01000179.1 246182 247276 2 + 1095 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.230104.peg.3520 CDS JNHN01000179.1 247282 248121 1 + 840 FIG137478: Hypothetical protein tRNA modification Bacteria
fig|6666666.230104.peg.3521 CDS JNHN01000179.1 248267 249433 2 + 1167 FIG00406678: hypothetical protein - none -
fig|6666666.230104.peg.3522 CDS JNHN01000179.1 249447 250241 3 + 795 FIG00414651: hypothetical protein - none -
fig|6666666.230104.peg.3523 CDS JNHN01000179.1 250392 251768 3 + 1377 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.3524 CDS JNHN01000179.1 251806 252897 1 + 1092 Membrane fusion protein of RND family multidrug efflux pump Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.3525 CDS JNHN01000179.1 252923 256036 2 + 3114 RND efflux system, inner membrane transporter CmeB Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.3526 CDS JNHN01000179.1 256174 257064 1 + 891 Beta-lactamase (EC 3.5.2.6) Beta-lactamase
fig|6666666.230104.peg.3527 CDS JNHN01000179.1 257544 257095 -3 - 450 FIG00936906: hypothetical protein - none -
fig|6666666.230104.peg.3528 CDS JNHN01000179.1 257609 258385 2 + 777 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.230104.peg.3529 CDS JNHN01000179.1 258427 259446 1 + 1020 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.230104.peg.3530 CDS JNHN01000179.1 260380 260817 1 + 438 FIG00939128: hypothetical protein - none -
fig|6666666.230104.peg.3531 CDS JNHN01000179.1 260935 261711 1 + 777 Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.230104.peg.3532 CDS JNHN01000179.1 261699 262610 3 + 912 Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.230104.peg.3533 CDS JNHN01000179.1 263381 262704 -2 - 678 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.230104.peg.3534 CDS JNHN01000179.1 263471 265468 2 + 1998 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.230104.peg.3535 CDS JNHN01000179.1 265572 266465 3 + 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230104.peg.3536 CDS JNHN01000179.1 269481 267184 -3 - 2298 putative patatin-like phospholipase - none -
fig|6666666.230104.peg.3537 CDS JNHN01000179.1 271711 269663 -1 - 2049 Chaperone protein HtpG Protein chaperones
fig|6666666.230104.peg.3538 CDS JNHN01000179.1 274351 271823 -1 - 2529 ATP-dependent Clp protease ATP-binding subunit ClpA ClpAS cluster;
Proteolysis in bacteria, ATP-dependent;
Ribosome recycling related cluster
fig|6666666.230104.peg.3539 CDS JNHN01000179.1 274803 277181 3 + 2379 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.230104.peg.3540 CDS JNHN01000179.1 277212 278453 3 + 1242 putative tetratricopeptide repeat family protein - none -
fig|6666666.230104.peg.3541 CDS JNHN01000179.1 279771 278641 -3 - 1131 UspA - none -
fig|6666666.230104.peg.3542 CDS JNHN01000179.1 280133 279852 -2 - 282 FIG00898612: hypothetical protein - none -
fig|6666666.230104.peg.3543 CDS JNHN01000179.1 281216 280377 -2 - 840 BatE Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230104.peg.3544 CDS JNHN01000179.1 283077 281233 -3 - 1845 BatD Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230104.peg.3545 CDS JNHN01000179.1 283800 283099 -3 - 702 BatC Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230104.peg.3546 CDS JNHN01000179.1 284834 283806 -2 - 1029 BatB Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230104.peg.3547 CDS JNHN01000179.1 285897 284914 -3 - 984 BatA (Bacteroides aerotolerance operon) Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230104.peg.3548 CDS JNHN01000179.1 287072 285993 -2 - 1080 FIG00936810: hypothetical protein - none -
fig|6666666.230104.peg.3549 CDS JNHN01000179.1 287949 287080 -3 - 870 hypothetical protein PA3071 Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230104.peg.3550 CDS JNHN01000179.1 289113 288118 -3 - 996 MoxR-like ATPase in aerotolerance operon Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230104.peg.3551 CDS JNHN01000179.1 290488 289307 -1 - 1182 putative integration host factor IHF alpha subunit - none -
fig|6666666.230104.peg.3552 CDS JNHN01000179.1 290788 290516 -1 - 273 Integration host factor alpha subunit DNA structural proteins, bacterial
fig|6666666.230104.peg.3553 CDS JNHN01000179.1 292165 290867 -1 - 1299 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.230104.peg.3554 CDS JNHN01000179.1 293121 292162 -3 - 960 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP)
fig|6666666.230104.peg.3555 CDS JNHN01000179.1 293530 293372 -1 - 159 FIG00402702: hypothetical protein - none -
fig|6666666.230104.peg.3556 CDS JNHN01000179.1 293733 293545 -3 - 189 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent - none -
fig|6666666.230104.peg.3557 CDS JNHN01000179.1 294014 293754 -2 - 261 LSU ribosomal protein L28p - none -
fig|6666666.230104.peg.3558 CDS JNHN01000179.1 294603 294136 -3 - 468 Molybdopterin binding motif, CinA N-terminal domain / C-terminal domain of CinA type S NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.230104.peg.3559 CDS JNHN01000179.1 295639 294617 -1 - 1023 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ
fig|6666666.230104.peg.3560 CDS JNHN01000179.1 295844 300316 2 + 4473 FIG00937153: hypothetical protein - none -
fig|6666666.230104.peg.3561 CDS JNHN01000179.1 302108 300474 -2 - 1635 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.230104.peg.3562 CDS JNHN01000179.1 302343 303176 3 + 834 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.230104.peg.3563 CDS JNHN01000179.1 303260 303754 2 + 495 hypothetical protein - none -
fig|6666666.230104.peg.3564 CDS JNHN01000179.1 304990 303824 -1 - 1167 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) De Novo Purine Biosynthesis
fig|6666666.230104.peg.3565 CDS JNHN01000179.1 306646 305129 -1 - 1518 Ribosylnicotinamide kinase (EC 2.7.1.22) homolog / Unknown conserved in Flavobacteria - none -
fig|6666666.230104.peg.3566 CDS JNHN01000179.1 306728 308971 2 + 2244 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I Stringent Response, (p)ppGpp metabolism
fig|6666666.230104.peg.3567 CDS JNHN01000179.1 308988 309359 3 + 372 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.230104.peg.3568 CDS JNHN01000179.1 310264 309335 -1 - 930 Major facilitator family transporter - none -
fig|6666666.230104.peg.3569 CDS JNHN01000179.1 311111 310293 -2 - 819 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.230104.peg.3570 CDS JNHN01000179.1 311831 311184 -2 - 648 putative phosphatase/phosphohexomutase - none -
fig|6666666.230104.peg.3571 CDS JNHN01000179.1 311950 313305 1 + 1356 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230104.peg.3572 CDS JNHN01000179.1 315760 313457 -1 - 2304 ABC transporter permease protein - none -
fig|6666666.230104.peg.3573 CDS JNHN01000179.1 318083 315780 -2 - 2304 ABC transporter permease protein - none -
fig|6666666.230104.peg.3574 CDS JNHN01000179.1 318788 318105 -2 - 684 ABC transporter ATP-binding protein - none -
fig|6666666.230104.peg.3575 CDS JNHN01000179.1 321128 318813 -2 - 2316 ABC transporter permease protein - none -
fig|6666666.230104.peg.3576 CDS JNHN01000179.1 321120 321248 3 + 129 hypothetical protein - none -
fig|6666666.230104.peg.3577 CDS JNHN01000179.1 321398 322219 2 + 822 putative calcineurin superfamily phosphohydrolase - none -
fig|6666666.230104.peg.3578 CDS JNHN01000179.1 322320 322931 3 + 612 FIG00403603: hypothetical protein - none -
fig|6666666.230104.peg.3579 CDS JNHN01000179.1 323175 324545 3 + 1371 Two-component system response regulator - none -
fig|6666666.230104.peg.3580 CDS JNHN01000179.1 324535 325842 1 + 1308 Sensor histidine kinase - none -
fig|6666666.230104.peg.3581 CDS JNHN01000179.1 325937 327388 2 + 1452 Na(+)/H(+) antiporter - none -
fig|6666666.230104.peg.3582 CDS JNHN01000179.1 327504 329171 3 + 1668 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.230104.peg.3583 CDS JNHN01000179.1 331668 329515 -3 - 2154 Alpha-glucosidase SusB (EC 3.2.1.20) Cellulosome
fig|6666666.230104.peg.3584 CDS JNHN01000179.1 334188 331690 -3 - 2499 Alpha-xylosidase (EC 3.2.1.-) Xylose utilization
fig|6666666.230104.peg.3585 CDS JNHN01000179.1 336028 334223 -1 - 1806 dextranase precursor - none -
fig|6666666.230104.peg.3586 CDS JNHN01000179.1 337538 336042 -2 - 1497 FIG00403304: hypothetical protein - none -
fig|6666666.230104.peg.3587 CDS JNHN01000179.1 339063 337558 -3 - 1506 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.3588 CDS JNHN01000179.1 341996 339063 -2 - 2934 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230104.peg.3589 CDS JNHN01000179.1 342507 342917 3 + 411 hypothetical protein - none -
fig|6666666.230104.peg.3590 CDS JNHN01000179.1 343079 343294 2 + 216 FIG00408583: hypothetical protein - none -
fig|6666666.230104.peg.3591 CDS JNHN01000179.1 343306 343527 1 + 222 FIG00896355: hypothetical protein - none -
fig|6666666.230104.peg.3592 CDS JNHN01000179.1 343541 343957 2 + 417 FIG00899057: hypothetical protein - none -
fig|6666666.230104.peg.3593 CDS JNHN01000179.1 343954 345285 1 + 1332 FIG00897206: hypothetical protein - none -
fig|6666666.230104.peg.3594 CDS JNHN01000179.1 345364 345567 1 + 204 FIG00938992: hypothetical protein - none -
fig|6666666.230104.peg.3595 CDS JNHN01000179.1 345599 345820 2 + 222 FIG00937084: hypothetical protein - none -
fig|6666666.230104.peg.3596 CDS JNHN01000179.1 345817 346062 1 + 246 FIG00897394: hypothetical protein - none -
fig|6666666.230104.peg.3597 CDS JNHN01000179.1 346068 346424 3 + 357 FIG00403252: hypothetical protein - none -
fig|6666666.230104.peg.3598 CDS JNHN01000179.1 346703 346458 -2 - 246 FIG00407972: hypothetical protein - none -
fig|6666666.230104.peg.3599 CDS JNHN01000179.1 347205 346912 -3 - 294 Lysozyme-related protein - none -
fig|6666666.230104.peg.3600 CDS JNHN01000179.1 347939 347436 -2 - 504 Conjugative transposon protein TraQ Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3601 CDS JNHN01000179.1 348838 347936 -1 - 903 Conjugative transposon protein TraP @ DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230104.peg.3602 CDS JNHN01000179.1 349340 348846 -2 - 495 Conjugative transposon protein TraO Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3603 CDS JNHN01000179.1 350392 349424 -1 - 969 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3604 CDS JNHN01000179.1 351797 350445 -2 - 1353 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3605 CDS JNHN01000179.1 352065 351778 -3 - 288 Mobile element protein - none -
fig|6666666.230104.peg.3606 CDS JNHN01000179.1 352716 352093 -3 - 624 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3607 CDS JNHN01000179.1 353752 352748 -1 - 1005 Conjugative transposon protein TraJ Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3608 CDS JNHN01000179.1 354367 353756 -1 - 612 Conjugative transposon protein TraI Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3609 CDS JNHN01000179.1 354789 354409 -3 - 381 Conjugative transposon protein TraH Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3610 CDS JNHN01000179.1 357334 354830 -1 - 2505 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3611 CDS JNHN01000179.1 357663 357331 -3 - 333 Conjugative transposon protein TraF Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3612 CDS JNHN01000179.1 357991 357674 -1 - 318 Conjugative transposon protein TraE Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3613 CDS JNHN01000179.1 358200 358072 -3 - 129 hypothetical protein - none -
fig|6666666.230104.peg.3614 CDS JNHN01000179.1 358966 358193 -1 - 774 Conjugative transposon protein TraD Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3615 CDS JNHN01000179.1 359237 358938 -2 - 300 Conjugative transposon protein TraC Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3616 CDS JNHN01000179.1 359734 359294 -1 - 441 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3617 CDS JNHN01000179.1 360786 359737 -3 - 1050 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3618 CDS JNHN01000179.1 360771 360938 3 + 168 FIG00896613: hypothetical protein - none -
fig|6666666.230104.peg.3619 CDS JNHN01000179.1 361208 361636 2 + 429 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3620 CDS JNHN01000179.1 361615 362862 1 + 1248 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3621 CDS JNHN01000179.1 362893 363819 1 + 927 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3622 CDS JNHN01000179.1 364456 366108 1 + 1653 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) Group II intron-associated genes
fig|6666666.230104.peg.3623 CDS JNHN01000179.1 366149 367327 2 + 1179 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230104.peg.3624 CDS JNHN01000179.1 370713 367459 -3 - 3255 FIG00404088: hypothetical protein - none -
fig|6666666.230104.peg.3625 CDS JNHN01000179.1 371758 370730 -1 - 1029 Prokaryotic ATPase - none -
fig|6666666.230104.peg.3626 CDS JNHN01000179.1 372767 372162 -2 - 606 tetracycline resistance element mobilization regulatory protein RteC - none -
fig|6666666.230104.peg.3627 CDS JNHN01000179.1 373428 373006 -3 - 423 FIG00937326: hypothetical protein - none -
fig|6666666.230104.peg.3628 CDS JNHN01000179.1 375030 373708 -3 - 1323 tetracycline resistance element regulator RteB - Bacteroides thetaiotaomicron - none -
fig|6666666.230104.peg.3629 CDS JNHN01000179.1 377341 375023 -1 - 2319 FIG00939874: hypothetical protein - none -
fig|6666666.230104.peg.3630 CDS JNHN01000179.1 379314 377341 -3 - 1974 Tetracycline resistance protein TetQ - none -
fig|6666666.230104.peg.3631 CDS JNHN01000179.1 385740 379924 -3 - 5817 putative DNA methylase - none -
fig|6666666.230104.peg.3632 CDS JNHN01000179.1 386182 385730 -1 - 453 FIG00936811: hypothetical protein - none -
fig|6666666.230104.peg.3633 CDS JNHN01000179.1 388432 386345 -1 - 2088 DNA topoisomerase III, Bacteroidales-type (EC 5.99.1.2) DNA topoisomerases, Type I, ATP-independent
fig|6666666.230104.peg.3634 CDS JNHN01000179.1 390064 388493 -1 - 1572 FIG00937566: hypothetical protein - none -
fig|6666666.230104.peg.3635 CDS JNHN01000179.1 390435 390085 -3 - 351 FIG00938987: hypothetical protein - none -
fig|6666666.230104.peg.3636 CDS JNHN01000179.1 390801 390439 -3 - 363 FIG00936922: hypothetical protein - none -
fig|6666666.230104.peg.3637 CDS JNHN01000179.1 391009 391302 1 + 294 FIG00938698: hypothetical protein - none -
fig|6666666.230104.peg.3638 CDS JNHN01000179.1 391334 391639 2 + 306 FIG00407580: hypothetical protein - none -
fig|6666666.230104.peg.3639 CDS JNHN01000179.1 392079 391717 -3 - 363 FIG00417797: hypothetical protein - none -
fig|6666666.230104.peg.3640 CDS JNHN01000179.1 393326 392091 -2 - 1236 Mobile element protein - none -
fig|6666666.230104.peg.3641 CDS JNHN01000179.1 393697 393584 -1 - 114 hypothetical protein - none -
fig|6666666.230104.peg.3642 CDS JNHN01000179.1 393731 393856 2 + 126 hypothetical protein - none -
fig|6666666.230104.peg.3643 CDS JNHN01000179.1 395565 393907 -3 - 1659 Regulatory protein SusR Cellulosome
fig|6666666.230104.peg.3644 CDS JNHN01000179.1 395753 395640 -2 - 114 hypothetical protein - none -
fig|6666666.230104.peg.3645 CDS JNHN01000179.1 395771 397072 2 + 1302 FIG00417958: hypothetical protein - none -
fig|6666666.230104.peg.3646 CDS JNHN01000179.1 397108 397575 1 + 468 Ser-tRNA(Ala) deacylase; Gly-tRNA(Ala) deacylase tRNA aminoacylation, Ala;
tRNA aminoacylation, Ala
fig|6666666.230104.peg.3647 CDS JNHN01000179.1 397824 398264 3 + 441 Small heat shock protein - none -
fig|6666666.230104.peg.3648 CDS JNHN01000179.1 398725 398345 -1 - 381 Acyltransferase - none -
fig|6666666.230104.peg.3649 CDS JNHN01000179.1 399481 398759 -1 - 723 Acyltransferase - none -
fig|6666666.230104.peg.3650 CDS JNHN01000179.1 400911 399796 -3 - 1116 ABC-type multidrug transport system, permease component - none -
fig|6666666.230104.peg.3651 CDS JNHN01000179.1 401014 400892 -1 - 123 hypothetical protein - none -
fig|6666666.230104.peg.3652 CDS JNHN01000179.1 402127 401024 -1 - 1104 ABC transport system, permease component YbhR - none -
fig|6666666.230104.peg.3653 CDS JNHN01000179.1 403632 402175 -3 - 1458 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.230104.peg.3654 CDS JNHN01000179.1 404500 403610 -1 - 891 FIG00938133: hypothetical protein - none -
fig|6666666.230104.peg.3655 CDS JNHN01000179.1 405797 404535 -2 - 1263 Type I secretion system, outer membrane component LapE - none -
fig|6666666.230104.peg.3656 CDS JNHN01000179.1 405989 406882 2 + 894 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.3657 CDS JNHN01000179.1 407433 406885 -3 - 549 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.230104.peg.3658 CDS JNHN01000179.1 410713 407471 -1 - 3243 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.230104.peg.3659 CDS JNHN01000179.1 412001 410925 -2 - 1077 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.230104.peg.3660 CDS JNHN01000179.1 413893 412010 -1 - 1884 Amidophosphoribosyltransferase (EC 2.4.2.14) Colicin V and Bacteriocin Production Cluster;
De Novo Purine Biosynthesis
fig|6666666.230104.peg.3661 CDS JNHN01000179.1 415884 414040 -3 - 1845 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Inteins;
Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.230104.peg.3662 CDS JNHN01000179.1 416253 420803 3 + 4551 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230104.peg.3663 CDS JNHN01000179.1 420879 422246 3 + 1368 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230104.peg.3664 CDS JNHN01000179.1 422288 424015 2 + 1728 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230104.peg.3665 CDS JNHN01000179.1 424642 424217 -1 - 426 hypothetical protein - none -
fig|6666666.230104.peg.3666 CDS JNHN01000179.1 426190 424886 -1 - 1305 hypothetical protein - none -
fig|6666666.230104.peg.3667 CDS JNHN01000179.1 427748 426462 -2 - 1287 Lipopolysaccharide biosynthesis protein RffA - none -
fig|6666666.230104.peg.3668 CDS JNHN01000179.1 428430 427777 -3 - 654 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) CBSS-258594.1.peg.3339
fig|6666666.230104.peg.3669 CDS JNHN01000179.1 428581 428408 -1 - 174 hypothetical protein - none -
fig|6666666.230104.peg.3670 CDS JNHN01000179.1 428963 428841 -2 - 123 hypothetical protein - none -
fig|6666666.230104.peg.3671 CDS JNHN01000179.1 429732 429040 -3 - 693 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230104.peg.3672 CDS JNHN01000179.1 431171 429924 -2 - 1248 hypothetical protein - none -
fig|6666666.230104.peg.3673 CDS JNHN01000179.1 432028 431231 -1 - 798 Glycosyl transferase, group 2 family protein - none -
fig|6666666.230104.peg.3674 CDS JNHN01000179.1 433164 432061 -3 - 1104 capsular polysaccharide biosynthesis protein Rhamnose containing glycans
fig|6666666.230104.peg.3675 CDS JNHN01000179.1 434395 433166 -1 - 1230 glycosyl transferase, group 1/2 family protein - none -
fig|6666666.230104.peg.3676 CDS JNHN01000179.1 436025 434895 -2 - 1131 hypothetical protein - none -
fig|6666666.230104.peg.3677 CDS JNHN01000179.1 437512 436037 -1 - 1476 Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids - none -
fig|6666666.230104.peg.3678 CDS JNHN01000179.1 438826 437555 -1 - 1272 putative glycosyltransferase - none -
fig|6666666.230104.peg.3679 CDS JNHN01000179.1 439115 438975 -2 - 141 hypothetical protein - none -
fig|6666666.230104.peg.3680 CDS JNHN01000179.1 440068 439133 -1 - 936 hypothetical protein - none -
fig|6666666.230104.peg.3681 CDS JNHN01000179.1 440958 440065 -3 - 894 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.230104.peg.3682 CDS JNHN01000179.1 441203 440964 -2 - 240 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230104.peg.3683 CDS JNHN01000179.1 442095 441217 -3 - 879 Inner membrane protein - none -
fig|6666666.230104.peg.3684 CDS JNHN01000179.1 443992 442256 -1 - 1737 putative modular polyketide synthase - none -
fig|6666666.230104.peg.3685 CDS JNHN01000179.1 445815 443998 -3 - 1818 Related to F420H2-dehydrogenase, beta subunit - none -
fig|6666666.230104.peg.3686 CDS JNHN01000179.1 446039 445836 -2 - 204 Mobile element protein - none -
fig|6666666.230104.peg.3687 CDS JNHN01000179.1 447192 446095 -3 - 1098 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) Capsular heptose biosynthesis
fig|6666666.230104.peg.3688 CDS JNHN01000179.1 448336 448187 -1 - 150 GDP-L-fucose synthetase (EC 1.1.1.271) Capsular heptose biosynthesis
fig|6666666.230104.peg.3689 CDS JNHN01000179.1 449511 448447 -3 - 1065 UDP-glucuronate 5@1-epimerase (EC 5.1.3.12) CBSS-296591.1.peg.2330
fig|6666666.230104.peg.3690 CDS JNHN01000179.1 450858 449515 -3 - 1344 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.230104.peg.3691 CDS JNHN01000179.1 451375 450887 -1 - 489 UpdZ protein - none -
fig|6666666.230104.peg.3692 CDS JNHN01000179.1 451976 451446 -2 - 531 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230104.peg.3693 CDS JNHN01000179.1 452598 452957 3 + 360 hypothetical protein - none -
fig|6666666.230104.peg.3694 CDS JNHN01000179.1 453138 453503 3 + 366 hypothetical protein - none -
fig|6666666.230104.peg.3695 CDS JNHN01000179.1 453529 454230 1 + 702 DnaD domain protein - none -
fig|6666666.230104.peg.3696 CDS JNHN01000179.1 454290 455054 3 + 765 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) - none -
fig|6666666.230104.peg.3697 CDS JNHN01000179.1 455395 456243 1 + 849 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230104.peg.3698 CDS JNHN01000179.1 456271 457503 1 + 1233 L,L-diaminopimelate aminotransferase (EC 2.6.1.83) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230104.peg.3699 CDS JNHN01000179.1 457589 458314 2 + 726 FrrB - none -
fig|6666666.230104.peg.3700 CDS JNHN01000179.1 458386 458742 1 + 357 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.230104.peg.3701 CDS JNHN01000179.1 458801 460069 2 + 1269 Ammonium transporter family Ammonia assimilation
fig|6666666.230104.peg.3702 CDS JNHN01000179.1 460115 462304 2 + 2190 Glutamine synthetase type III, GlnN (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.230104.peg.3703 CDS JNHN01000179.1 462486 462337 -3 - 150 hypothetical protein - none -
fig|6666666.230104.peg.3704 CDS JNHN01000179.1 462485 463783 2 + 1299 putative secreted tripeptidyl aminopeptidase - none -
fig|6666666.230104.peg.3705 CDS JNHN01000179.1 464444 463869 -2 - 576 FIG00412396: hypothetical protein - none -
fig|6666666.230104.peg.3706 CDS JNHN01000179.1 464683 464510 -1 - 174 hypothetical protein - none -
fig|6666666.230104.peg.3707 CDS JNHN01000179.1 465073 466251 1 + 1179 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230104.peg.3708 CDS JNHN01000179.1 466311 467711 3 + 1401 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230104.peg.3709 CDS JNHN01000179.1 467811 468437 3 + 627 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.230104.peg.3710 CDS JNHN01000179.1 468502 469497 1 + 996 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230104.peg.3711 CDS JNHN01000179.1 469502 470329 2 + 828 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230104.peg.3712 CDS JNHN01000179.1 470467 471063 1 + 597 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230104.peg.3713 CDS JNHN01000179.1 471253 471071 -1 - 183 hypothetical protein - none -
fig|6666666.230104.peg.3714 CDS JNHN01000179.1 471233 472012 2 + 780 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230104.peg.3715 CDS JNHN01000179.1 472208 473194 2 + 987 L-asparaginase I, cytoplasmic (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230104.peg.3716 CDS JNHN01000179.1 473375 475657 2 + 2283 FIG00403729: hypothetical protein - none -
fig|6666666.230104.peg.3717 CDS JNHN01000179.1 475683 476042 3 + 360 putative two-component system response regulator - none -
fig|6666666.230104.peg.3718 CDS JNHN01000179.1 476061 477227 3 + 1167 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) CBSS-258594.1.peg.3339
fig|6666666.230104.peg.3719 CDS JNHN01000179.1 477220 478098 1 + 879 FIG00898846: hypothetical protein - none -
fig|6666666.230104.peg.3720 CDS JNHN01000179.1 478105 480264 1 + 2160 Tyrosine-protein kinase Wzc (EC 2.7.10.2) CBSS-258594.1.peg.3339
fig|6666666.230104.peg.3721 CDS JNHN01000179.1 480264 481733 3 + 1470 Teichuronic acid biosynthesis protein TuaE, putative secreted polysaccharide polymerase Teichuronic acid biosynthesis
fig|6666666.230104.peg.3722 CDS JNHN01000179.1 481748 482974 2 + 1227 FIG00897759: hypothetical protein - none -
fig|6666666.230104.peg.3723 CDS JNHN01000179.1 482958 484094 3 + 1137 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230104.peg.3724 CDS JNHN01000179.1 484110 485309 3 + 1200 Glycosyl transferase, group 1 CBSS-258594.1.peg.3339
fig|6666666.230104.peg.3725 CDS JNHN01000179.1 485306 486253 2 + 948 Biotin carboxylase (EC 6.3.4.14) - none -
fig|6666666.230104.peg.3726 CDS JNHN01000179.1 486606 487226 3 + 621 FIG00418196: hypothetical protein - none -
fig|6666666.230104.peg.3727 CDS JNHN01000179.1 487453 487899 1 + 447 FIG00418196: hypothetical protein - none -
fig|6666666.230104.peg.3728 CDS JNHN01000179.1 487967 489502 2 + 1536 DNA primase/helicase (EC 2.7.7.-) - none -
fig|6666666.230104.peg.3729 CDS JNHN01000179.1 489474 489602 3 + 129 hypothetical protein - none -
fig|6666666.230104.peg.3730 CDS JNHN01000179.1 489633 489881 3 + 249 FIG00417360: hypothetical protein - none -
fig|6666666.230104.peg.3731 CDS JNHN01000179.1 489972 489856 -3 - 117 hypothetical protein - none -
fig|6666666.230104.peg.3732 CDS JNHN01000179.1 490271 490131 -2 - 141 hypothetical protein - none -
fig|6666666.230104.peg.3733 CDS JNHN01000179.1 490287 490802 3 + 516 FIG00416394: hypothetical protein - none -
fig|6666666.230104.peg.3734 CDS JNHN01000179.1 490836 490949 3 + 114 hypothetical protein - none -
fig|6666666.230104.peg.3735 CDS JNHN01000179.1 490983 491426 3 + 444 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230104.peg.3736 CDS JNHN01000179.1 491420 491593 2 + 174 hypothetical protein - none -
fig|6666666.230104.peg.3737 CDS JNHN01000179.1 491590 491853 1 + 264 Conserved protein, with a weak D-galactarate dehydratase/altronate hydrolase domain - none -
fig|6666666.230104.peg.3738 CDS JNHN01000179.1 492794 491877 -2 - 918 Glycosyl transferase, family 2 - none -
fig|6666666.230104.peg.3739 CDS JNHN01000179.1 492729 492863 3 + 135 hypothetical protein - none -
fig|6666666.230104.peg.3740 CDS JNHN01000179.1 493915 492929 -1 - 987 FIG00410152: hypothetical protein - none -
fig|6666666.230104.peg.3741 CDS JNHN01000179.1 495102 493924 -3 - 1179 Alpha-1,4-N-acetylgalactosamine transferase PglH (EC 2.4.1.-) N-linked Glycosylation in Bacteria
fig|6666666.230104.peg.3742 CDS JNHN01000179.1 496766 495237 -2 - 1530 O-antigen flippase Wzx - none -
fig|6666666.230104.peg.3743 CDS JNHN01000179.1 497701 496760 -1 - 942 glycosyl transferase, family 2 - none -
fig|6666666.230104.peg.3744 CDS JNHN01000179.1 498747 497719 -3 - 1029 glycosyltransferase family 2 protein - none -
fig|6666666.230104.peg.3745 CDS JNHN01000179.1 499800 498754 -3 - 1047 Beta-1,3-glucosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.230104.peg.3746 CDS JNHN01000179.1 501706 499805 -1 - 1902 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230104.peg.3747 CDS JNHN01000179.1 502923 501751 -3 - 1173 FIG00418002: hypothetical protein - none -
fig|6666666.230104.peg.3748 CDS JNHN01000179.1 504231 503563 -3 - 669 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230104.peg.3749 CDS JNHN01000179.1 504656 504318 -2 - 339 FIG00416149: hypothetical protein - none -
fig|6666666.230104.peg.3750 CDS JNHN01000179.1 505760 504735 -2 - 1026 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230104.peg.3751 CDS JNHN01000179.1 506102 507157 2 + 1056 Transcriptional regulator - none -
fig|6666666.230104.peg.3752 CDS JNHN01000179.1 507272 508783 2 + 1512 Altronate dehydratase (EC 4.2.1.7) - none -
fig|6666666.230104.peg.3753 CDS JNHN01000179.1 508960 510270 1 + 1311 Methionine transporter MetT Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230104.peg.3754 CDS JNHN01000179.1 510446 510994 2 + 549 SSU ribosomal protein S16p - none -
fig|6666666.230104.peg.3755 CDS JNHN01000179.1 511118 512215 2 + 1098 Thiol:disulfide interchange protein - none -
fig|6666666.230104.peg.3756 CDS JNHN01000179.1 513336 512371 -3 - 966 Methionine synthase II (cobalamin-independent) - none -
fig|6666666.230104.peg.3757 CDS JNHN01000179.1 513335 513454 2 + 120 hypothetical protein - none -
fig|6666666.230104.peg.3758 CDS JNHN01000179.1 513762 515969 3 + 2208 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Inteins;
Ribonucleotide reduction
fig|6666666.230104.peg.3759 CDS JNHN01000179.1 516107 516613 2 + 507 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.230104.peg.3760 CDS JNHN01000179.1 518124 516778 -3 - 1347 FIG00899271: hypothetical protein - none -
fig|6666666.230104.peg.3761 CDS JNHN01000179.1 518236 518958 1 + 723 FIG00408327: hypothetical protein - none -
fig|6666666.230104.peg.3762 CDS JNHN01000179.1 519733 518987 -1 - 747 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.230104.peg.3763 CDS JNHN01000179.1 520021 519770 -1 - 252 hypothetical protein - none -
fig|6666666.230104.peg.3764 CDS JNHN01000179.1 520310 520816 2 + 507 Flavodoxin 1 Flavodoxin
fig|6666666.230104.peg.3765 CDS JNHN01000179.1 523505 520941 -2 - 2565 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.3766 CDS JNHN01000179.1 525197 523536 -2 - 1662 Glycogen - none -
fig|6666666.230104.peg.3767 CDS JNHN01000179.1 525912 525493 -3 - 420 V-type ATP synthase subunit K (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230104.peg.3768 CDS JNHN01000179.1 527772 525946 -3 - 1827 V-type ATP synthase subunit I (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230104.peg.3769 CDS JNHN01000179.1 528374 527769 -2 - 606 V-type ATP synthase subunit D (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230104.peg.3770 CDS JNHN01000179.1 529820 528495 -2 - 1326 V-type ATP synthase subunit B (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230104.peg.3771 CDS JNHN01000179.1 531715 529961 -1 - 1755 V-type ATP synthase subunit A (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230104.peg.3772 CDS JNHN01000179.1 532556 531735 -2 - 822 V-type ATP synthase subunit C (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230104.peg.3773 CDS JNHN01000179.1 533181 532591 -3 - 591 V-type ATP synthase subunit E (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230104.peg.3774 CDS JNHN01000179.1 533276 533410 2 + 135 hypothetical protein - none -
fig|6666666.230104.peg.3775 CDS JNHN01000180.1 105 953 3 + 849 hypothetical protein - none -
fig|6666666.230104.peg.3776 CDS JNHN01000180.1 2118 1447 -3 - 672 Similar to tRNA pseudouridine synthase C, group TruC1 RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.230104.peg.3777 CDS JNHN01000180.1 2957 2211 -2 - 747 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.230104.peg.3778 CDS JNHN01000180.1 3573 2989 -3 - 585 Transcriptional regulator, TetR family - none -
fig|6666666.230104.peg.3779 CDS JNHN01000180.1 3985 4110 1 + 126 hypothetical protein - none -
fig|6666666.230104.peg.3780 CDS JNHN01000180.1 5837 4527 -2 - 1311 Anaerobic C4-dicarboxylate transporter - none -
fig|6666666.230104.peg.3781 CDS JNHN01000180.1 6723 5890 -3 - 834 FIG00402879: hypothetical protein - none -
fig|6666666.230104.peg.3782 CDS JNHN01000180.1 7104 6736 -3 - 369 Transcriptional regulator, GntR family - none -
fig|6666666.230104.peg.3783 CDS JNHN01000180.1 7937 7107 -2 - 831 FIG00403434: hypothetical protein - none -
fig|6666666.230104.peg.3784 CDS JNHN01000180.1 8788 7937 -1 - 852 ABC transporter, ATP-binding protein - none -
fig|6666666.230104.peg.3785 CDS JNHN01000180.1 9035 9958 2 + 924 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.3786 CDS JNHN01000180.1 11451 10006 -3 - 1446 Tetratricopeptide repeat family protein - none -
fig|6666666.230104.peg.3787 CDS JNHN01000180.1 12407 11457 -2 - 951 Putative phosphate ABC transporter, phosphate-binding component - none -
fig|6666666.230104.peg.3788 CDS JNHN01000180.1 13234 12419 -1 - 816 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.230104.peg.3789 CDS JNHN01000180.1 13913 13263 -2 - 651 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.230104.peg.3790 CDS JNHN01000180.1 14558 13953 -2 - 606 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.230104.peg.3791 CDS JNHN01000180.1 15464 14652 -2 - 813 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.230104.peg.3792 CDS JNHN01000180.1 16110 15664 -3 - 447 FIG00403079: hypothetical protein - none -
fig|6666666.230104.peg.3793 CDS JNHN01000181.1 5550 5347 -3 - 204 hypothetical protein - none -
fig|6666666.230104.peg.3794 CDS JNHN01000181.1 5674 5814 1 + 141 hypothetical protein - none -
fig|6666666.230104.peg.3795 CDS JNHN01000181.1 6556 5948 -1 - 609 putative DNA-binding protein - none -
fig|6666666.230104.peg.3796 CDS JNHN01000181.1 6621 6767 3 + 147 hypothetical protein - none -
fig|6666666.230104.peg.3797 CDS JNHN01000181.1 7520 6801 -2 - 720 FIG00402811: hypothetical protein - none -
fig|6666666.230104.peg.3798 CDS JNHN01000181.1 7543 7668 1 + 126 hypothetical protein - none -
fig|6666666.230104.peg.3799 CDS JNHN01000181.1 9107 7707 -2 - 1401 Outer membrane protein oprM - none -
fig|6666666.230104.peg.3800 CDS JNHN01000181.1 12330 9139 -3 - 3192 RND efflux system, inner membrane transporter CmeB Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.3801 CDS JNHN01000181.1 13466 12351 -2 - 1116 Multidrug resistance protein - none -
fig|6666666.230104.peg.3802 CDS JNHN01000181.1 13658 14494 2 + 837 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.3803 CDS JNHN01000181.1 14603 16252 2 + 1650 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230104.peg.3804 CDS JNHN01000181.1 17761 16253 -1 - 1509 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) - none -
fig|6666666.230104.peg.3805 CDS JNHN01000181.1 18452 17748 -2 - 705 putative periplasmic protein - none -
fig|6666666.230104.peg.3806 CDS JNHN01000181.1 18453 18644 3 + 192 hypothetical protein - none -
fig|6666666.230104.peg.3807 CDS JNHN01000181.1 20100 18667 -3 - 1434 putative periplasmic protein - none -
fig|6666666.230104.peg.3808 CDS JNHN01000181.1 20410 20165 -1 - 246 FIG00936253: hypothetical protein - none -
fig|6666666.230104.peg.3809 CDS JNHN01000181.1 23644 20510 -1 - 3135 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA Cobalt-zinc-cadmium resistance;
Cobalt-zinc-cadmium resistance
fig|6666666.230104.peg.3810 CDS JNHN01000181.1 24826 23783 -1 - 1044 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.230104.peg.3811 CDS JNHN01000181.1 26195 24837 -2 - 1359 Outer membrane efflux protein precursor - none -
fig|6666666.230104.peg.3812 CDS JNHN01000181.1 26852 26223 -2 - 630 Transcriptional regulator, TetR family - none -
fig|6666666.230104.peg.3813 CDS JNHN01000181.1 28537 27041 -1 - 1497 Histidine ammonia-lyase (EC 4.3.1.3) Histidine Degradation
fig|6666666.230104.peg.3814 CDS JNHN01000181.1 29163 28534 -3 - 630 Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4) One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.230104.peg.3815 CDS JNHN01000181.1 30465 29212 -3 - 1254 Imidazolonepropionase (EC 3.5.2.7) Histidine Degradation
fig|6666666.230104.peg.3816 CDS JNHN01000181.1 31419 30529 -3 - 891 Glutamate formiminotransferase (EC 2.1.2.5) @ Glutamate formyltransferase Histidine Degradation
fig|6666666.230104.peg.3817 CDS JNHN01000181.1 33548 31566 -2 - 1983 Urocanate hydratase (EC 4.2.1.49) Histidine Degradation
fig|6666666.230104.peg.3818 CDS JNHN01000181.1 33844 33686 -1 - 159 hypothetical protein - none -
fig|6666666.230104.peg.3819 CDS JNHN01000181.1 34345 33869 -1 - 477 FIG00406490: hypothetical protein - none -
fig|6666666.230104.peg.3820 CDS JNHN01000181.1 34778 35056 2 + 279 FIG00417315: hypothetical protein - none -
fig|6666666.230104.peg.3821 CDS JNHN01000181.1 35053 35673 1 + 621 putative surface protein - none -
fig|6666666.230104.peg.3822 CDS JNHN01000181.1 35728 35868 1 + 141 hypothetical protein - none -
fig|6666666.230104.peg.3823 CDS JNHN01000181.1 36346 35903 -1 - 444 FIG00414833: hypothetical protein - none -
fig|6666666.230104.peg.3824 CDS JNHN01000181.1 37062 36367 -3 - 696 FIG00405371: hypothetical protein - none -
fig|6666666.230104.peg.3825 CDS JNHN01000181.1 37138 39036 1 + 1899 MutS-related protein, family 1 DNA repair, bacterial MutL-MutS system
fig|6666666.230104.peg.3826 CDS JNHN01000181.1 39616 39077 -1 - 540 FIG00404196: hypothetical protein - none -
fig|6666666.230104.peg.3827 CDS JNHN01000181.1 40151 39726 -2 - 426 FIG00404648: hypothetical protein - none -
fig|6666666.230104.peg.3828 CDS JNHN01000181.1 40727 40281 -2 - 447 LSU ribosomal protein L17p - none -
fig|6666666.230104.peg.3829 CDS JNHN01000181.1 41741 40788 -2 - 954 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.230104.peg.3830 CDS JNHN01000181.1 42397 41792 -1 - 606 SSU ribosomal protein S4p (S9e) - none -
fig|6666666.230104.peg.3831 CDS JNHN01000181.1 42904 42515 -1 - 390 SSU ribosomal protein S11p (S14e) - none -
fig|6666666.230104.peg.3832 CDS JNHN01000181.1 43296 42916 -3 - 381 SSU ribosomal protein S13p (S18e) - none -
fig|6666666.230104.peg.3833 CDS JNHN01000181.1 43675 43457 -1 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.230104.peg.3834 CDS JNHN01000181.1 44485 43685 -1 - 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.230104.peg.3835 CDS JNHN01000181.1 45842 44499 -2 - 1344 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.230104.peg.3836 CDS JNHN01000181.1 46293 45847 -3 - 447 LSU ribosomal protein L15p (L27Ae) - none -
fig|6666666.230104.peg.3837 CDS JNHN01000181.1 47030 46512 -2 - 519 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation
fig|6666666.230104.peg.3838 CDS JNHN01000182.1 4302 7 -3 - 4296 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.230104.peg.3839 CDS JNHN01000182.1 8223 4411 -3 - 3813 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.230104.peg.3840 CDS JNHN01000182.1 8706 8329 -3 - 378 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster
fig|6666666.230104.peg.3841 CDS JNHN01000182.1 9289 8768 -1 - 522 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster
fig|6666666.230104.peg.3842 CDS JNHN01000182.1 10003 9305 -1 - 699 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster
fig|6666666.230104.peg.3843 CDS JNHN01000182.1 10462 10019 -1 - 444 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster
fig|6666666.230104.peg.3844 CDS JNHN01000182.1 11064 10522 -3 - 543 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.230104.peg.3845 CDS JNHN01000182.1 11265 11077 -3 - 189 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.230104.peg.3846 CDS JNHN01000182.1 12593 11409 -2 - 1185 Translation elongation factor Tu - none -
fig|6666666.230104.peg.3847 CDS JNHN01000182.1 13328 13107 -2 - 222 Ribosome hibernation protein YhbH Ribosome activity modulation
fig|6666666.230104.peg.3848 CDS JNHN01000182.1 14309 13425 -2 - 885 Integrase, site-specific recombinase - none -
fig|6666666.230104.peg.3849 CDS JNHN01000182.1 14574 14383 -3 - 192 SSU ribosomal protein S21p Macromolecular synthesis operon
fig|6666666.230104.peg.3850 CDS JNHN01000182.1 14788 16647 1 + 1860 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-)
fig|6666666.230104.peg.3851 CDS JNHN01000182.1 16652 17164 2 + 513 N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230104.peg.3852 CDS JNHN01000182.1 18476 17256 -2 - 1221 Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase (EC 2.4.99.12) [often with (EC 2.4.99.13) also] - none -
fig|6666666.230104.peg.3853 CDS JNHN01000182.1 20034 18508 -3 - 1527 Glutamyl-tRNA synthetase (EC 6.1.1.17) tRNA aminoacylation, Glu and Gln
fig|6666666.230104.peg.3854 CDS JNHN01000182.1 20093 22192 2 + 2100 Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog CBSS-56780.10.peg.1536
fig|6666666.230104.peg.3855 CDS JNHN01000182.1 22198 22971 1 + 774 FIG00412745: hypothetical protein - none -
fig|6666666.230104.peg.3856 CDS JNHN01000182.1 23105 24058 2 + 954 Mobile element protein - none -
fig|6666666.230104.peg.3857 CDS JNHN01000182.1 24538 27594 1 + 3057 hypothetical protein - none -
fig|6666666.230104.peg.3858 CDS JNHN01000182.1 27782 30247 2 + 2466 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.230104.peg.3859 CDS JNHN01000182.1 30269 30730 2 + 462 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster
fig|6666666.230104.peg.3860 CDS JNHN01000182.1 32868 30727 -3 - 2142 putative helicase - none -
fig|6666666.230104.peg.3861 CDS JNHN01000182.1 33068 33214 2 + 147 hypothetical protein - none -
fig|6666666.230104.peg.3862 CDS JNHN01000182.1 33218 33841 2 + 624 putative DNA-binding protein - none -
fig|6666666.230104.peg.3863 CDS JNHN01000182.1 33864 33977 3 + 114 hypothetical protein - none -
fig|6666666.230104.peg.3864 CDS JNHN01000182.1 36663 34141 -3 - 2523 FIG00408361: hypothetical protein - none -
fig|6666666.230104.peg.3865 CDS JNHN01000183.1 403 975 1 + 573 hypothetical protein - none -
fig|6666666.230104.peg.3866 CDS JNHN01000183.1 4202 1464 -2 - 2739 FIG00415464: hypothetical protein - none -
fig|6666666.230104.peg.3867 CDS JNHN01000183.1 5861 4419 -2 - 1443 FIG00415875: hypothetical protein - none -
fig|6666666.230104.peg.3868 CDS JNHN01000183.1 7710 5971 -3 - 1740 Putative carboxy-terminal processing protease (EC 3.4.21.102) - none -
fig|6666666.230104.peg.3869 CDS JNHN01000183.1 8910 7846 -3 - 1065 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.230104.peg.3870 CDS JNHN01000183.1 10501 11106 1 + 606 hypothetical protein - none -
fig|6666666.230104.peg.3871 CDS JNHN01000183.1 11812 11108 -1 - 705 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
CBSS-216591.1.peg.168
fig|6666666.230104.peg.3872 CDS JNHN01000183.1 12641 11844 -2 - 798 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.230104.peg.3873 CDS JNHN01000183.1 13118 12651 -2 - 468 hypothetical protein - none -
fig|6666666.230104.peg.3874 CDS JNHN01000183.1 13962 13360 -3 - 603 putative DNA-binding protein - none -
fig|6666666.230104.peg.3875 CDS JNHN01000183.1 14267 15379 2 + 1113 COG0457: FOG: TPR repeat - none -
fig|6666666.230104.peg.3876 CDS JNHN01000183.1 15390 17459 3 + 2070 hypothetical protein - none -
fig|6666666.230104.peg.3877 CDS JNHN01000183.1 17679 18158 3 + 480 FIG00413911: hypothetical protein - none -
fig|6666666.230104.peg.3878 CDS JNHN01000183.1 18721 18230 -1 - 492 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.230104.peg.3879 CDS JNHN01000183.1 18828 19367 3 + 540 Nudix hydrolase family protein - none -
fig|6666666.230104.peg.3880 CDS JNHN01000183.1 19496 22516 2 + 3021 TPR-domain containing protein - none -
fig|6666666.230104.peg.3881 CDS JNHN01000183.1 22532 24163 2 + 1632 putative TonB-dependent receptor - none -
fig|6666666.230104.peg.3882 CDS JNHN01000183.1 24309 26711 3 + 2403 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent;
Inteins
fig|6666666.230104.peg.3883 CDS JNHN01000183.1 28670 26853 -2 - 1818 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.230104.peg.3884 CDS JNHN01000183.1 29092 28826 -1 - 267 DNA-binding protein HU-beta DNA structural proteins, bacterial
fig|6666666.230104.peg.3885 CDS JNHN01000183.1 29300 29133 -2 - 168 FIG00416267: hypothetical protein - none -
fig|6666666.230104.peg.3886 CDS JNHN01000183.1 29324 30022 2 + 699 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.230104.peg.3887 CDS JNHN01000183.1 30003 30893 3 + 891 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.230104.peg.3888 CDS JNHN01000183.1 30986 32086 2 + 1101 AP endonuclease domain protein - none -
fig|6666666.230104.peg.3889 CDS JNHN01000183.1 32122 34206 1 + 2085 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.230104.peg.3890 CDS JNHN01000183.1 34290 37286 3 + 2997 Protein-export membrane protein SecD (TC 3.A.5.1.1) / Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832;
CBSS-211586.1.peg.2832
fig|6666666.230104.peg.3891 CDS JNHN01000184.1 48 1022 3 + 975 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230104.peg.3892 CDS JNHN01000184.1 1036 4389 1 + 3354 heparin lyase I precursor( EC:4.2.2.7 ) - none -
fig|6666666.230104.peg.3893 CDS JNHN01000184.1 4801 6648 1 + 1848 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) - none -
fig|6666666.230104.peg.3894 CDS JNHN01000184.1 6748 7752 1 + 1005 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) - none -
fig|6666666.230104.peg.3895 CDS JNHN01000184.1 8117 8284 2 + 168 FIG00418218: hypothetical protein - none -
fig|6666666.230104.peg.3896 CDS JNHN01000184.1 8446 11763 1 + 3318 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.3897 CDS JNHN01000184.1 11750 13477 2 + 1728 FIG00416872: hypothetical protein - none -
fig|6666666.230104.peg.3898 CDS JNHN01000184.1 13779 15287 3 + 1509 D-alanine--poly(phosphoribitol) ligase subunit 1 (EC 6.1.1.13) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230104.peg.3899 CDS JNHN01000184.1 15296 15538 2 + 243 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230104.peg.3900 CDS JNHN01000184.1 15758 16930 2 + 1173 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) - none -
fig|6666666.230104.peg.3901 CDS JNHN01000184.1 16943 18031 2 + 1089 FIG00416332: hypothetical protein - none -
fig|6666666.230104.peg.3902 CDS JNHN01000184.1 18926 20533 2 + 1608 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) Pyruvate metabolism I: anaplerotic reactions, PEP;
Serine-glyoxylate cycle
fig|6666666.230104.peg.3903 CDS JNHN01000184.1 20803 21318 1 + 516 putative NADH dehydrogenase/NAD(P)H nitroreductase - none -
fig|6666666.230104.peg.3904 CDS JNHN01000184.1 23208 21409 -3 - 1800 GTP-binding protein TypA/BipA - none -
fig|6666666.230104.peg.3905 CDS JNHN01000184.1 23367 23636 3 + 270 SSU ribosomal protein S15p (S13e) CBSS-350688.3.peg.1509
fig|6666666.230104.peg.3906 CDS JNHN01000184.1 23772 23656 -3 - 117 hypothetical protein - none -
fig|6666666.230104.peg.3907 CDS JNHN01000184.1 23780 24616 2 + 837 FIG00415662: hypothetical protein - none -
fig|6666666.230104.peg.3908 CDS JNHN01000184.1 24681 25118 3 + 438 FIG00416879: hypothetical protein - none -
fig|6666666.230104.peg.3909 CDS JNHN01000184.1 25175 27586 2 + 2412 putative TonB-dependent receptor - none -
fig|6666666.230104.peg.3910 CDS JNHN01000184.1 27763 28338 1 + 576 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.230104.peg.3911 CDS JNHN01000184.1 28371 30065 3 + 1695 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.230104.peg.3912 CDS JNHN01000184.1 30653 30162 -2 - 492 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230104.peg.3913 CDS JNHN01000184.1 31358 30678 -2 - 681 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.230104.peg.3914 CDS JNHN01000184.1 31527 31414 -3 - 114 hypothetical protein - none -
fig|6666666.230104.peg.3915 CDS JNHN01000184.1 31627 34137 1 + 2511 FIG00896840: hypothetical protein - none -
fig|6666666.230104.peg.3916 CDS JNHN01000184.1 34545 34670 3 + 126 hypothetical protein - none -
fig|6666666.230104.peg.3917 CDS JNHN01000184.1 34824 35165 3 + 342 Ribosome-binding factor A CBSS-138119.3.peg.2719;
CBSS-350688.3.peg.1509;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.230104.peg.3918 CDS JNHN01000184.1 35165 36400 2 + 1236 Lipoprotein releasing system transmembrane protein LolC Lipoprotein sorting system
fig|6666666.230104.peg.3919 CDS JNHN01000184.1 37039 36410 -1 - 630 O-methyltransferase family protein [C1] - none -
fig|6666666.230104.peg.3920 CDS JNHN01000184.1 38615 37158 -2 - 1458 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230104.peg.3921 CDS JNHN01000184.1 39055 38636 -1 - 420 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.230104.peg.3922 CDS JNHN01000184.1 39174 40127 3 + 954 Phage integrase - none -
fig|6666666.230104.peg.3923 CDS JNHN01000184.1 40264 41958 1 + 1695 Immunoreactive 53 kDa antigen PG123 - none -
fig|6666666.230104.peg.3924 CDS JNHN01000184.1 42070 43143 1 + 1074 Thiol:disulfide interchange protein - none -
fig|6666666.230104.peg.3925 CDS JNHN01000184.1 43181 44149 2 + 969 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.230104.peg.3926 CDS JNHN01000184.1 44583 44762 3 + 180 hypothetical protein - none -
fig|6666666.230104.peg.3927 CDS JNHN01000184.1 45108 44884 -3 - 225 hypothetical protein - none -
fig|6666666.230104.peg.3928 CDS JNHN01000184.1 45844 45719 -1 - 126 hypothetical protein - none -
fig|6666666.230104.peg.3929 CDS JNHN01000184.1 46003 46152 1 + 150 hypothetical protein - none -
fig|6666666.230104.peg.3930 CDS JNHN01000184.1 46462 46644 1 + 183 hypothetical protein - none -
fig|6666666.230104.peg.3931 CDS JNHN01000184.1 46598 47143 2 + 546 hypothetical protein - none -
fig|6666666.230104.peg.3932 CDS JNHN01000184.1 47253 48416 3 + 1164 Mobile element protein - none -
fig|6666666.230104.peg.3933 CDS JNHN01000184.1 48631 48837 1 + 207 hypothetical protein - none -
fig|6666666.230104.peg.3934 CDS JNHN01000184.1 49388 48897 -2 - 492 hypothetical protein - none -
fig|6666666.230104.peg.3935 CDS JNHN01000184.1 49678 50652 1 + 975 hypothetical protein - none -
fig|6666666.230104.peg.3936 CDS JNHN01000184.1 51119 51544 2 + 426 Integrase - none -
fig|6666666.230104.peg.3937 CDS JNHN01000184.1 52110 52505 3 + 396 hypothetical protein - none -
fig|6666666.230104.peg.3938 CDS JNHN01000184.1 52592 52870 2 + 279 hypothetical protein - none -
fig|6666666.230104.peg.3939 CDS JNHN01000184.1 53529 53389 -3 - 141 hypothetical protein - none -
fig|6666666.230104.peg.3940 CDS JNHN01000184.1 53701 54336 1 + 636 hypothetical protein - none -
fig|6666666.230104.peg.3941 CDS JNHN01000184.1 54409 54825 1 + 417 hypothetical protein - none -
fig|6666666.230104.peg.3942 CDS JNHN01000184.1 57166 55295 -1 - 1872 putative conjugative transposon recombinase - none -
fig|6666666.230104.peg.3943 CDS JNHN01000184.1 57295 57888 1 + 594 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.230104.peg.3944 CDS JNHN01000184.1 60015 57955 -3 - 2061 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.230104.peg.3945 CDS JNHN01000184.1 60184 61116 1 + 933 FIG00413160: hypothetical protein - none -
fig|6666666.230104.peg.3946 CDS JNHN01000184.1 62011 61103 -1 - 909 two-component sensor kinase - none -
fig|6666666.230104.peg.3947 CDS JNHN01000184.1 62891 62133 -2 - 759 Two-component system response regulator - none -
fig|6666666.230104.peg.3948 CDS JNHN01000184.1 63877 62957 -1 - 921 FIG00418272: hypothetical protein - none -
fig|6666666.230104.peg.3949 CDS JNHN01000184.1 64109 64552 2 + 444 FIG00414833: hypothetical protein - none -
fig|6666666.230104.peg.3950 CDS JNHN01000184.1 64819 65001 1 + 183 hypothetical protein - none -
fig|6666666.230104.peg.3951 CDS JNHN01000184.1 65037 65984 3 + 948 Mobile element protein - none -
fig|6666666.230104.peg.3952 CDS JNHN01000184.1 67267 66416 -1 - 852 hypothetical protein - none -
fig|6666666.230104.peg.3953 CDS JNHN01000184.1 67434 69476 3 + 2043 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.230104.peg.3954 CDS JNHN01000184.1 69569 71014 2 + 1446 Lipopolysaccharide biosynthesis protein WzxC - none -
fig|6666666.230104.peg.3955 CDS JNHN01000184.1 71011 71922 1 + 912 FIG00417891: hypothetical protein - none -
fig|6666666.230104.peg.3956 CDS JNHN01000184.1 71924 72856 2 + 933 licD family protein - none -
fig|6666666.230104.peg.3957 CDS JNHN01000184.1 72872 73888 2 + 1017 protein containing nucleotide-diphospho-sugar transferase domain - none -
fig|6666666.230104.peg.3958 CDS JNHN01000184.1 73929 75194 3 + 1266 Glycosyl transferase, group 1 family protein - none -
fig|6666666.230104.peg.3959 CDS JNHN01000184.1 75187 75933 1 + 747 Glycosyl transferase, group 2 family protein - none -
fig|6666666.230104.peg.3960 CDS JNHN01000184.1 75981 76103 3 + 123 hypothetical protein - none -
fig|6666666.230104.peg.3961 CDS JNHN01000184.1 76915 76199 -1 - 717 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.230104.peg.3962 CDS JNHN01000184.1 77098 77691 1 + 594 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.230104.peg.3963 CDS JNHN01000184.1 77710 78576 1 + 867 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.230104.peg.3964 CDS JNHN01000184.1 78807 79271 3 + 465 Transcriptional regulator, AsnC family - none -
fig|6666666.230104.peg.3965 CDS JNHN01000184.1 79281 79592 3 + 312 conserved hypothetical protein, putative membrane protein - none -
fig|6666666.230104.peg.3966 CDS JNHN01000184.1 79900 81168 1 + 1269 transposase - none -
fig|6666666.230104.peg.3967 CDS JNHN01000184.1 81239 82081 2 + 843 hypothetical protein - none -
fig|6666666.230104.peg.3968 CDS JNHN01000184.1 82431 83456 3 + 1026 hypothetical protein - none -
fig|6666666.230104.peg.3969 CDS JNHN01000184.1 83854 84045 1 + 192 hypothetical protein - none -
fig|6666666.230104.peg.3970 CDS JNHN01000184.1 84359 84622 2 + 264 hypothetical protein - none -
fig|6666666.230104.peg.3971 CDS JNHN01000184.1 85092 86111 3 + 1020 hypothetical protein - none -
fig|6666666.230104.peg.3972 CDS JNHN01000184.1 86794 87381 1 + 588 Mobile element protein - none -
fig|6666666.230104.peg.3973 CDS JNHN01000184.1 88559 89767 2 + 1209 hypothetical protein - none -
fig|6666666.230104.peg.3974 CDS JNHN01000184.1 90187 91455 1 + 1269 transposase - none -
fig|6666666.230104.peg.3975 CDS JNHN01000184.1 92774 91662 -2 - 1113 hypothetical protein - none -
fig|6666666.230104.peg.3976 CDS JNHN01000184.1 93080 92967 -2 - 114 hypothetical protein - none -
fig|6666666.230104.peg.3977 CDS JNHN01000184.1 95189 93090 -2 - 2100 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230104.peg.3978 CDS JNHN01000184.1 97093 95525 -1 - 1569 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230104.peg.3979 CDS JNHN01000184.1 98126 97104 -2 - 1023 L-rhamnose-proton symporter - none -
fig|6666666.230104.peg.3980 CDS JNHN01000184.1 99053 98157 -2 - 897 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.230104.peg.3981 CDS JNHN01000184.1 101828 99087 -2 - 2742 Beta-mannosidase (EC 3.2.1.25) Mannose Metabolism
fig|6666666.230104.peg.3982 CDS JNHN01000184.1 102758 101874 -2 - 885 Glucokinase (EC 2.7.1.2) Glycolysis and Gluconeogenesis
fig|6666666.230104.peg.3983 CDS JNHN01000184.1 103822 102761 -1 - 1062 Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) - none -
fig|6666666.230104.peg.3984 CDS JNHN01000184.1 105516 103897 -3 - 1620 hypothetical protein - none -
fig|6666666.230104.peg.3985 CDS JNHN01000184.1 107024 105513 -2 - 1512 FIG00897450: hypothetical protein - none -
fig|6666666.230104.peg.3986 CDS JNHN01000184.1 108088 107021 -1 - 1068 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230104.peg.3987 CDS JNHN01000184.1 109213 108110 -1 - 1104 endoglucanase E precursor (EGE) - none -
fig|6666666.230104.peg.3988 CDS JNHN01000184.1 110591 109224 -2 - 1368 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230104.peg.3989 CDS JNHN01000184.1 111628 110636 -1 - 993 Putative phosphohydrolase, Icc family - none -
fig|6666666.230104.peg.3990 CDS JNHN01000184.1 113153 111738 -2 - 1416 hypothetical protein - none -
fig|6666666.230104.peg.3991 CDS JNHN01000184.1 114792 113203 -3 - 1590 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.3992 CDS JNHN01000184.1 117921 114805 -3 - 3117 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.3993 CDS JNHN01000184.1 119150 117960 -2 - 1191 N-acylglucosamine 2-epimerase (EC 5.1.3.8) Sialic Acid Metabolism
fig|6666666.230104.peg.3994 CDS JNHN01000184.1 120739 119219 -1 - 1521 FIG00897450: hypothetical protein - none -
fig|6666666.230104.peg.3995 CDS JNHN01000184.1 122163 120757 -3 - 1407 D-xylose proton-symporter XylE Xylose utilization
fig|6666666.230104.peg.3996 CDS JNHN01000184.1 123625 122192 -1 - 1434 FIG00908930: hypothetical protein - none -
fig|6666666.230104.peg.3997 CDS JNHN01000184.1 124569 123628 -3 - 942 FIG00938776: hypothetical protein - none -
fig|6666666.230104.peg.3998 CDS JNHN01000184.1 125057 126235 2 + 1179 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.230104.peg.3999 CDS JNHN01000184.1 126605 127861 2 + 1257 FIG00414220: hypothetical protein - none -
fig|6666666.230104.peg.4000 CDS JNHN01000184.1 127863 128630 3 + 768 D-alanyl-D-alanine dipeptidase (EC 3.4.13.22) - none -
fig|6666666.230104.peg.4001 CDS JNHN01000184.1 128683 128823 1 + 141 hypothetical protein - none -
fig|6666666.230104.peg.4002 CDS JNHN01000184.1 128832 130079 3 + 1248 SAM-dependent methyltransferases - none -
fig|6666666.230104.peg.4003 CDS JNHN01000184.1 130353 133121 3 + 2769 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.4004 CDS JNHN01000184.1 133182 134111 3 + 930 Tartrate-resistant acid phosphatase type 5 precursor (EC 3.1.3.2) - none -
fig|6666666.230104.peg.4005 CDS JNHN01000184.1 134294 135583 2 + 1290 FIG00407002: hypothetical protein - none -
fig|6666666.230104.peg.4006 CDS JNHN01000184.1 137398 135593 -1 - 1806 Mechanosensitive ion channel family protein - none -
fig|6666666.230104.peg.4007 CDS JNHN01000184.1 137567 138547 2 + 981 Sodium-calcium exchanger - none -
fig|6666666.230104.peg.4008 CDS JNHN01000184.1 138698 139834 2 + 1137 FIG00935709: hypothetical protein - none -
fig|6666666.230104.peg.4009 CDS JNHN01000184.1 139952 141886 2 + 1935 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.230104.peg.4010 CDS JNHN01000184.1 141883 142341 1 + 459 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.230104.peg.4011 CDS JNHN01000184.1 142370 143986 2 + 1617 Carboxy-terminal processing protease - none -
fig|6666666.230104.peg.4012 CDS JNHN01000184.1 144671 144069 -2 - 603 Membrane-associated phospholipid phosphatase - none -
fig|6666666.230104.peg.4013 CDS JNHN01000184.1 144777 145679 3 + 903 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.4014 CDS JNHN01000184.1 145881 146540 3 + 660 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.230104.peg.4015 CDS JNHN01000184.1 146577 148523 3 + 1947 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.230104.peg.4016 CDS JNHN01000184.1 148557 149312 3 + 756 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.230104.peg.4017 CDS JNHN01000184.1 149990 149451 -2 - 540 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.4018 CDS JNHN01000184.1 149994 150359 3 + 366 hypothetical protein - none -
fig|6666666.230104.peg.4019 CDS JNHN01000184.1 151431 150463 -3 - 969 FIG00405468: hypothetical protein - none -
fig|6666666.230104.peg.4020 CDS JNHN01000184.1 152433 151477 -3 - 957 FIG00406595: hypothetical protein - none -
fig|6666666.230104.peg.4021 CDS JNHN01000184.1 152786 152457 -2 - 330 FIG00403496: hypothetical protein - none -
fig|6666666.230104.peg.4022 CDS JNHN01000184.1 153509 154312 2 + 804 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) - none -
fig|6666666.230104.peg.4023 CDS JNHN01000184.1 155450 154332 -2 - 1119 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.230104.peg.4024 CDS JNHN01000184.1 155854 155462 -1 - 393 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.230104.peg.4025 CDS JNHN01000184.1 157195 155903 -1 - 1293 Collagenase precursor (EC 3.4.-.-) - none -
fig|6666666.230104.peg.4026 CDS JNHN01000184.1 157265 158245 2 + 981 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.230104.peg.4027 CDS JNHN01000184.1 158651 158499 -2 - 153 hypothetical protein - none -
fig|6666666.230104.peg.4028 CDS JNHN01000184.1 158604 158729 3 + 126 hypothetical protein - none -
fig|6666666.230104.peg.4029 CDS JNHN01000184.1 159691 158726 -1 - 966 FIG00403590: hypothetical protein - none -
fig|6666666.230104.peg.4030 CDS JNHN01000184.1 160689 159682 -3 - 1008 NAD-dependent epimerase/dehydratase family protein CBSS-296591.1.peg.2330
fig|6666666.230104.peg.4031 CDS JNHN01000184.1 161773 160751 -1 - 1023 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.230104.peg.4032 CDS JNHN01000184.1 161916 164060 3 + 2145 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.230104.peg.4033 CDS JNHN01000184.1 164226 164702 3 + 477 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230104.peg.4034 CDS JNHN01000184.1 165713 164766 -2 - 948 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.230104.peg.4035 CDS JNHN01000184.1 165933 166832 3 + 900 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.230104.peg.4036 CDS JNHN01000184.1 166972 168471 1 + 1500 Methyltransferase (EC 2.1.1.-) - none -
fig|6666666.230104.peg.4037 CDS JNHN01000184.1 168480 170717 3 + 2238 Dipeptidyl peptidase IV - none -
fig|6666666.230104.peg.4038 CDS JNHN01000184.1 170908 172182 1 + 1275 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.230104.peg.4039 CDS JNHN01000184.1 172183 173178 1 + 996 FIG00936973: hypothetical protein - none -
fig|6666666.230104.peg.4040 CDS JNHN01000184.1 173163 173642 3 + 480 probable integral membrane protein Cj0341c - none -
fig|6666666.230104.peg.4041 CDS JNHN01000184.1 173805 174485 3 + 681 putative peptidase - none -
fig|6666666.230104.peg.4042 CDS JNHN01000184.1 174563 175465 2 + 903 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.230104.peg.4043 CDS JNHN01000184.1 175500 176309 3 + 810 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.230104.peg.4044 CDS JNHN01000184.1 178287 176392 -3 - 1896 FIG00402961: hypothetical protein - none -
fig|6666666.230104.peg.4045 CDS JNHN01000184.1 180799 178271 -1 - 2529 FIG00412616: hypothetical protein - none -
fig|6666666.230104.peg.4046 CDS JNHN01000184.1 182037 180805 -3 - 1233 N-acylglucosamine 2-epimerase (EC 5.1.3.8) Sialic Acid Metabolism
fig|6666666.230104.peg.4047 CDS JNHN01000184.1 183931 182252 -1 - 1680 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230104.peg.4048 CDS JNHN01000184.1 187117 183956 -1 - 3162 Regulatory sensor-transducer, BlaR1/MecR1 family / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230104.peg.4049 CDS JNHN01000184.1 189716 187341 -2 - 2376 Alpha-xylosidase (EC 3.2.1.-) Xylose utilization
fig|6666666.230104.peg.4050 CDS JNHN01000184.1 189973 193884 1 + 3912 DNA-binding response regulator, AraC family - none -
fig|6666666.230104.peg.4051 CDS JNHN01000184.1 195620 193890 -2 - 1731 cellulase - none -
fig|6666666.230104.peg.4052 CDS JNHN01000184.1 197562 195661 -3 - 1902 FIG00416521: hypothetical protein - none -
fig|6666666.230104.peg.4053 CDS JNHN01000184.1 198812 197559 -2 - 1254 N-acylglucosamine 2-epimerase (EC 5.1.3.8) Sialic Acid Metabolism
fig|6666666.230104.peg.4054 CDS JNHN01000184.1 199152 201686 3 + 2535 FIG00412616: hypothetical protein - none -
fig|6666666.230104.peg.4055 CDS JNHN01000184.1 203261 201840 -2 - 1422 sialic acid-specific 9-O-acetylesterase - none -
fig|6666666.230104.peg.4056 CDS JNHN01000184.1 203455 204582 1 + 1128 hypothetical protein - none -
fig|6666666.230104.peg.4057 CDS JNHN01000184.1 206009 205374 -2 - 636 ATPase - none -
fig|6666666.230104.peg.4058 CDS JNHN01000184.1 206291 206019 -2 - 273 ATPase - none -
fig|6666666.230104.peg.4059 CDS JNHN01000184.1 206712 210056 3 + 3345 membrane protein, putative - none -
fig|6666666.230104.peg.4060 CDS JNHN01000184.1 210251 210847 2 + 597 Polysaccharide deacetylase - none -
fig|6666666.230104.peg.4061 CDS JNHN01000184.1 211019 210882 -2 - 138 hypothetical protein - none -
fig|6666666.230104.peg.4062 CDS JNHN01000184.1 211872 210991 -3 - 882 FIG00414726: hypothetical protein - none -
fig|6666666.230104.peg.4063 CDS JNHN01000184.1 212299 214098 1 + 1800 sensor histidine kinase - none -
fig|6666666.230104.peg.4064 CDS JNHN01000184.1 214095 214727 3 + 633 DNA-binding response regulator, LuxR family - none -
fig|6666666.230104.peg.4065 CDS JNHN01000184.1 216038 214806 -2 - 1233 FIG00405395: hypothetical protein - none -
fig|6666666.230104.peg.4066 CDS JNHN01000184.1 216046 216210 1 + 165 hypothetical protein - none -
fig|6666666.230104.peg.4067 CDS JNHN01000184.1 217016 216213 -2 - 804 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230104.peg.4068 CDS JNHN01000184.1 217207 217055 -1 - 153 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230104.peg.4069 CDS JNHN01000184.1 218948 217656 -2 - 1293 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.230104.peg.4070 CDS JNHN01000184.1 219535 219056 -1 - 480 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.230104.peg.4071 CDS JNHN01000184.1 219939 219718 -3 - 222 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.230104.peg.4072 CDS JNHN01000184.1 220352 219936 -2 - 417 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.230104.peg.4073 CDS JNHN01000184.1 221296 220544 -1 - 753 uroporphyrinogen-III synthase HemD, putative - none -
fig|6666666.230104.peg.4074 CDS JNHN01000184.1 222032 221301 -2 - 732 FIG00938392: hypothetical protein - none -
fig|6666666.230104.peg.4075 CDS JNHN01000184.1 222682 222029 -1 - 654 Lysine decarboxylase family - none -
fig|6666666.230104.peg.4076 CDS JNHN01000184.1 222878 222690 -2 - 189 hypothetical protein - none -
fig|6666666.230104.peg.4077 CDS JNHN01000184.1 223006 223425 1 + 420 putative membrane protein - none -
fig|6666666.230104.peg.4078 CDS JNHN01000184.1 225904 224351 -1 - 1554 Mobile element protein - none -
fig|6666666.230104.peg.4079 CDS JNHN01000184.1 226486 226187 -1 - 300 hypothetical protein - none -
fig|6666666.230104.peg.4080 CDS JNHN01000184.1 228472 226607 -1 - 1866 Mobile element protein - none -
fig|6666666.230104.peg.4081 CDS JNHN01000184.1 229013 228561 -2 - 453 hypothetical protein - none -
fig|6666666.230104.peg.4082 CDS JNHN01000184.1 230868 229015 -3 - 1854 Mobile element protein - none -
fig|6666666.230104.peg.4083 CDS JNHN01000184.1 233451 231427 -3 - 2025 Mobile element protein - none -
fig|6666666.230104.peg.4084 CDS JNHN01000184.1 235308 233893 -3 - 1416 Mobile element protein - none -
fig|6666666.230104.peg.4085 CDS JNHN01000184.1 242134 235763 -1 - 6372 Mobile element protein - none -
fig|6666666.230104.peg.4086 CDS JNHN01000184.1 242773 242354 -1 - 420 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230104.peg.4087 CDS JNHN01000184.1 243451 242957 -1 - 495 putative non-specific DNA-binding protein - none -
fig|6666666.230104.peg.4088 CDS JNHN01000184.1 243613 243491 -1 - 123 hypothetical protein - none -
fig|6666666.230104.peg.4089 CDS JNHN01000184.1 244501 243638 -1 - 864 FIG00403097: hypothetical protein - none -
fig|6666666.230104.peg.4090 CDS JNHN01000184.1 244857 244549 -3 - 309 hypothetical protein - none -
fig|6666666.230104.peg.4091 CDS JNHN01000184.1 245107 244964 -1 - 144 hypothetical protein - none -
fig|6666666.230104.peg.4092 CDS JNHN01000184.1 245288 246010 2 + 723 FIG00409286: hypothetical protein - none -
fig|6666666.230104.peg.4093 CDS JNHN01000184.1 246241 248112 1 + 1872 Two-component system sensor histidine kinase - none -
fig|6666666.230104.peg.4094 CDS JNHN01000184.1 249434 248217 -2 - 1218 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230104.peg.4095 CDS JNHN01000184.1 250287 249811 -3 - 477 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.230104.peg.4096 CDS JNHN01000184.1 251348 250290 -2 - 1059 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230104.peg.4097 CDS JNHN01000184.1 252172 251465 -1 - 708 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
CBSS-350688.3.peg.1509;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.230104.peg.4098 CDS JNHN01000184.1 253079 252288 -2 - 792 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.230104.peg.4099 CDS JNHN01000184.1 253475 253236 -2 - 240 FIG00936924: hypothetical protein - none -
fig|6666666.230104.peg.4100 CDS JNHN01000184.1 254434 253559 -1 - 876 Cell division protein FtsX Bacterial Cell Division
fig|6666666.230104.peg.4101 CDS JNHN01000184.1 255416 254517 -2 - 900 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) - none -
fig|6666666.230104.peg.4102 CDS JNHN01000184.1 255789 256292 3 + 504 FIG00410772: hypothetical protein - none -
fig|6666666.230104.peg.4103 CDS JNHN01000184.1 257768 256395 -2 - 1374 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.230104.peg.4104 CDS JNHN01000184.1 258163 258543 1 + 381 FIG00402837: hypothetical protein - none -
fig|6666666.230104.peg.4105 CDS JNHN01000184.1 258617 260113 2 + 1497 Acetyl-CoA hydrolase (EC 3.1.2.1) - none -
fig|6666666.230104.peg.4106 CDS JNHN01000184.1 261951 260545 -3 - 1407 Outer membrane protein oprM - none -
fig|6666666.230104.peg.4107 CDS JNHN01000184.1 265160 261981 -2 - 3180 RND efflux system, inner membrane transporter CmeB Multidrug Resistance Efflux Pumps
fig|6666666.230104.peg.4108 CDS JNHN01000184.1 266367 265198 -3 - 1170 Multidrug resistance protein - none -
fig|6666666.230104.peg.4109 CDS JNHN01000184.1 266527 267438 1 + 912 Transcriptional regulator, AraC family - none -
fig|6666666.230104.peg.4110 CDS JNHN01000184.1 269029 267536 -1 - 1494 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.230104.peg.4111 CDS JNHN01000184.1 269207 270424 2 + 1218 peptidase M1, membrane alanine aminopeptidase - none -
fig|6666666.230104.peg.4112 CDS JNHN01000184.1 270855 270433 -3 - 423 hypothetical protein - none -
fig|6666666.230104.peg.4113 CDS JNHN01000184.1 272248 270890 -1 - 1359 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) Glycine cleavage system;
TCA Cycle
fig|6666666.230104.peg.4114 CDS JNHN01000184.1 272411 273385 2 + 975 FIG00403751: hypothetical protein - none -
fig|6666666.230104.peg.4115 CDS JNHN01000184.1 273714 273382 -3 - 333 hypothetical protein - none -
fig|6666666.230104.peg.4116 CDS JNHN01000184.1 274819 273740 -1 - 1080 FIG00410465: hypothetical protein - none -
fig|6666666.230104.peg.4117 CDS JNHN01000184.1 275062 276378 1 + 1317 FIG00407157: hypothetical protein - none -
fig|6666666.230104.peg.4118 CDS JNHN01000184.1 276336 277586 3 + 1251 putative outer membrane protein - none -
fig|6666666.230104.peg.4119 CDS JNHN01000184.1 278486 277740 -2 - 747 Two-component system response regulator - none -
fig|6666666.230104.peg.4120 CDS JNHN01000184.1 278565 278678 3 + 114 hypothetical protein - none -
fig|6666666.230104.peg.4121 CDS JNHN01000184.1 279074 278712 -2 - 363 FIG00413241: hypothetical protein - none -
fig|6666666.230104.peg.4122 CDS JNHN01000184.1 279512 279138 -2 - 375 FIG00406980: hypothetical protein - none -
fig|6666666.230104.peg.4123 CDS JNHN01000184.1 279703 281652 1 + 1950 FIG00409736: hypothetical protein - none -
fig|6666666.230104.peg.4124 CDS JNHN01000184.1 281729 283300 2 + 1572 L-aspartate oxidase (EC 1.4.3.16) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.230104.peg.4125 CDS JNHN01000184.1 283319 285067 2 + 1749 FIG00412221: hypothetical protein - none -
fig|6666666.230104.peg.4126 CDS JNHN01000184.1 285098 287281 2 + 2184 FIG00412200: hypothetical protein - none -
fig|6666666.230104.peg.4127 CDS JNHN01000184.1 287418 287278 -3 - 141 hypothetical protein - none -
fig|6666666.230104.peg.4128 CDS JNHN01000184.1 288153 287575 -3 - 579 Rubrerythrin Oxidative stress;
Rubrerythrin
fig|6666666.230104.peg.4129 CDS JNHN01000184.1 288541 290157 1 + 1617 Sulfate permease Cysteine Biosynthesis
fig|6666666.230104.peg.4130 CDS JNHN01000184.1 290165 291004 2 + 840 DNA/RNA endonuclease G - none -
fig|6666666.230104.peg.4131 CDS JNHN01000184.1 291519 291010 -3 - 510 FIG00403759: hypothetical protein - none -
fig|6666666.230104.peg.4132 CDS JNHN01000184.1 292303 291530 -1 - 774 Fe-S OXIDOREDUCTASE (1.8.-.-) - none -
fig|6666666.230104.peg.4133 CDS JNHN01000184.1 294459 292456 -3 - 2004 FIG00898434: hypothetical protein - none -
fig|6666666.230104.peg.4134 CDS JNHN01000184.1 294650 295231 2 + 582 FIG00896812: hypothetical protein - none -
fig|6666666.230104.peg.4135 CDS JNHN01000184.1 295966 295226 -1 - 741 FIG00413590: hypothetical protein - none -
fig|6666666.230104.peg.4136 CDS JNHN01000184.1 297058 296096 -1 - 963 Protein of unknown function DUF161 - none -
fig|6666666.230104.peg.4137 CDS JNHN01000184.1 297909 297382 -3 - 528 23S rRNA methyltransferase (EC 2.1.1.-) - none -
fig|6666666.230104.peg.4138 CDS JNHN01000184.1 298374 299312 3 + 939 Quinolinate synthetase (EC 2.5.1.72) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.230104.peg.4139 CDS JNHN01000184.1 299984 299406 -2 - 579 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.230104.peg.4140 CDS JNHN01000184.1 300924 300022 -3 - 903 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.230104.peg.4141 CDS JNHN01000184.1 303767 300930 -2 - 2838 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.230104.peg.4142 CDS JNHN01000184.1 304097 304219 2 + 123 hypothetical protein - none -
fig|6666666.230104.rna.1 RNA JNHN01000001.1 35918 35845 -2 - 74 tRNA-Pro-GGG tRNAs
fig|6666666.230104.rna.2 RNA JNHN01000033.1 247 172 -1 - 76 tRNA-Thr-CGT - none -
fig|6666666.230104.rna.3 RNA JNHN01000037.1 1 915 1 + 915 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.230104.rna.4 RNA JNHN01000037.1 1 915 1 + 915 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.230104.rna.5 RNA JNHN01000042.1 28769 28697 -2 - 73 tRNA-Lys-TTT - none -
fig|6666666.230104.rna.6 RNA JNHN01000065.1 1669 1741 1 + 73 tRNA-Trp-CCA tRNAs
fig|6666666.230104.rna.7 RNA JNHN01000067.1 21954 22026 3 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.8 RNA JNHN01000067.1 22048 22131 1 + 84 tRNA-Leu-TAA - none -
fig|6666666.230104.rna.9 RNA JNHN01000070.1 81 155 3 + 75 tRNA-Pseudo-TTC - none -
fig|6666666.230104.rna.10 RNA JNHN01000077.1 17394 17319 -3 - 76 tRNA-Phe-GAA tRNAs
fig|6666666.230104.rna.11 RNA JNHN01000090.1 29175 29264 3 + 90 tRNA-Ser-GCT - none -
fig|6666666.230104.rna.12 RNA JNHN01000090.1 29268 29343 3 + 76 tRNA-Lys-CTT - none -
fig|6666666.230104.rna.13 RNA JNHN01000090.1 29356 29430 1 + 75 tRNA-Glu-CTC - none -
fig|6666666.230104.rna.14 RNA JNHN01000102.1 107 35 -2 - 73 tRNA-His-GTG - none -
fig|6666666.230104.rna.15 RNA JNHN01000102.1 690 618 -3 - 73 tRNA-Arg-TCG - none -
fig|6666666.230104.rna.16 RNA JNHN01000111.1 902 1 -2 - 902 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.230104.rna.17 RNA JNHN01000115.1 20965 21040 1 + 76 tRNA-Met-CAT - none -
fig|6666666.230104.rna.18 RNA JNHN01000117.1 270 1 -3 - 270 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.230104.rna.19 RNA JNHN01000120.1 29937 29864 -3 - 74 tRNA-Gln-CTG - none -
fig|6666666.230104.rna.20 RNA JNHN01000147.1 19924 20008 1 + 85 tRNA-Leu-TAG - none -
fig|6666666.230104.rna.21 RNA JNHN01000155.1 551 479 -2 - 73 tRNA-Lys-TTT - none -
fig|6666666.230104.rna.22 RNA JNHN01000158.1 1 403 1 + 403 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.230104.rna.23 RNA JNHN01000160.1 63424 63338 -1 - 87 tRNA-Leu-CAA tRNAs
fig|6666666.230104.rna.24 RNA JNHN01000161.1 26970 26896 -3 - 75 tRNA-Glu-TTC - none -
fig|6666666.230104.rna.25 RNA JNHN01000163.1 17872 17797 -1 - 76 tRNA-Pro-CGG tRNAs
fig|6666666.230104.rna.26 RNA JNHN01000163.1 17960 17888 -2 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.230104.rna.27 RNA JNHN01000164.1 14988 14912 -3 - 77 tRNA-Met-CAT - none -
fig|6666666.230104.rna.28 RNA JNHN01000164.1 38227 38316 1 + 90 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.230104.rna.29 RNA JNHN01000166.1 14134 14062 -1 - 73 tRNA-Gly-TCC - none -
fig|6666666.230104.rna.30 RNA JNHN01000166.1 14226 14141 -3 - 86 tRNA-Tyr-GTA - none -
fig|6666666.230104.rna.31 RNA JNHN01000168.1 66626 66550 -2 - 77 tRNA-Thr-TGT - none -
fig|6666666.230104.rna.32 RNA JNHN01000170.1 39550 39475 -1 - 76 tRNA-Thr-CGT - none -
fig|6666666.230104.rna.33 RNA JNHN01000171.1 60582 60507 -3 - 76 tRNA-Lys-TTT - none -
fig|6666666.230104.rna.34 RNA JNHN01000172.1 50 131 2 + 82 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.35 RNA JNHN01000172.1 164 236 2 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.36 RNA JNHN01000172.1 264 348 3 + 85 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.37 RNA JNHN01000172.1 389 472 2 + 84 tRNA-Leu-GAG tRNAs
fig|6666666.230104.rna.38 RNA JNHN01000172.1 487 559 1 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.39 RNA JNHN01000172.1 10645 10721 1 + 77 tRNA-Asp-GTC - none -
fig|6666666.230104.rna.40 RNA JNHN01000173.1 203 119 -2 - 85 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.41 RNA JNHN01000173.1 304 229 -1 - 76 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.42 RNA JNHN01000173.1 418 337 -1 - 82 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.43 RNA JNHN01000173.1 519 444 -3 - 76 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.44 RNA JNHN01000173.1 617 534 -2 - 84 tRNA-Leu-GAG tRNAs
fig|6666666.230104.rna.45 RNA JNHN01000173.1 717 645 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.46 RNA JNHN01000173.1 831 750 -3 - 82 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.47 RNA JNHN01000173.1 932 857 -2 - 76 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.48 RNA JNHN01000173.1 1046 965 -2 - 82 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.49 RNA JNHN01000173.1 1146 1074 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.50 RNA JNHN01000173.1 1260 1179 -3 - 82 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.51 RNA JNHN01000173.1 1361 1286 -2 - 76 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.52 RNA JNHN01000173.1 1475 1394 -2 - 82 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.53 RNA JNHN01000173.1 1576 1501 -1 - 76 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.54 RNA JNHN01000173.1 1686 1602 -3 - 85 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.55 RNA JNHN01000173.1 1787 1712 -2 - 76 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.56 RNA JNHN01000173.1 1901 1820 -2 - 82 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.57 RNA JNHN01000173.1 2002 1927 -1 - 76 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.58 RNA JNHN01000173.1 2116 2035 -1 - 82 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.59 RNA JNHN01000173.1 2217 2142 -3 - 76 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.60 RNA JNHN01000173.1 2331 2250 -3 - 82 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.61 RNA JNHN01000173.1 2431 2359 -1 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.62 RNA JNHN01000173.1 2545 2464 -1 - 82 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.63 RNA JNHN01000173.1 2646 2571 -3 - 76 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.64 RNA JNHN01000173.1 2760 2679 -3 - 82 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.65 RNA JNHN01000173.1 2860 2788 -1 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.66 RNA JNHN01000173.1 2974 2893 -1 - 82 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.67 RNA JNHN01000173.1 3075 3000 -3 - 76 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.68 RNA JNHN01000173.1 3189 3108 -3 - 82 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.69 RNA JNHN01000173.1 3290 3215 -2 - 76 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.70 RNA JNHN01000173.1 3404 3323 -2 - 82 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.71 RNA JNHN01000173.1 3506 3434 -2 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.72 RNA JNHN01000173.1 3620 3539 -2 - 82 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.73 RNA JNHN01000173.1 3720 3648 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.74 RNA JNHN01000173.1 3834 3753 -3 - 82 tRNA-Pseudo-GAG - none -
fig|6666666.230104.rna.75 RNA JNHN01000173.1 3959 3875 -2 - 85 tRNA-Leu-CAG tRNAs
fig|6666666.230104.rna.76 RNA JNHN01000173.1 4060 3985 -1 - 76 tRNA-Gly-GCC tRNAs
fig|6666666.230104.rna.77 RNA JNHN01000174.1 84984 84910 -3 - 75 tRNA-Val-TAC - none -
fig|6666666.230104.rna.78 RNA JNHN01000174.1 85090 85016 -1 - 75 tRNA-Val-TAC - none -
fig|6666666.230104.rna.79 RNA JNHN01000174.1 85196 85122 -2 - 75 tRNA-Val-TAC - none -
fig|6666666.230104.rna.80 RNA JNHN01000174.1 85302 85228 -3 - 75 tRNA-Val-TAC - none -
fig|6666666.230104.rna.81 RNA JNHN01000174.1 85408 85334 -1 - 75 tRNA-Val-TAC - none -
fig|6666666.230104.rna.82 RNA JNHN01000174.1 85514 85440 -2 - 75 tRNA-Val-TAC - none -
fig|6666666.230104.rna.83 RNA JNHN01000174.1 116693 116584 -2 - 110 5S RNA - none -
fig|6666666.230104.rna.84 RNA JNHN01000174.1 119637 116817 -3 - 2821 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.230104.rna.85 RNA JNHN01000174.1 119832 119759 -3 - 74 tRNA-Ala-TGC - none -
fig|6666666.230104.rna.86 RNA JNHN01000174.1 119996 119923 -2 - 74 tRNA-Ile-GAT - none -
fig|6666666.230104.rna.87 RNA JNHN01000174.1 121664 120130 -2 - 1535 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.230104.rna.88 RNA JNHN01000174.1 373351 373427 1 + 77 tRNA-Asp-GTC - none -
fig|6666666.230104.rna.89 RNA JNHN01000174.1 422756 422682 -2 - 75 tRNA-Cys-GCA tRNAs
fig|6666666.230104.rna.90 RNA JNHN01000174.1 435566 435639 2 + 74 tRNA-His-GTG - none -
fig|6666666.230104.rna.91 RNA JNHN01000174.1 444614 444530 -2 - 85 tRNA-Ser-TGA - none -
fig|6666666.230104.rna.92 RNA JNHN01000174.1 458987 458897 -2 - 91 tRNA-Ser-GGA tRNAs
fig|6666666.230104.rna.93 RNA JNHN01000174.1 465140 465056 -2 - 85 tRNA-Ser-TGA - none -
fig|6666666.230104.rna.94 RNA JNHN01000175.1 144727 144618 -1 - 110 5S RNA - none -
fig|6666666.230104.rna.95 RNA JNHN01000175.1 147671 144851 -2 - 2821 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.230104.rna.96 RNA JNHN01000175.1 147866 147793 -2 - 74 tRNA-Ala-TGC - none -
fig|6666666.230104.rna.97 RNA JNHN01000175.1 148030 147957 -1 - 74 tRNA-Ile-GAT - none -
fig|6666666.230104.rna.98 RNA JNHN01000175.1 149576 148164 -2 - 1413 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.230104.rna.99 RNA JNHN01000177.1 6640 6564 -1 - 77 tRNA-Ala-GGC tRNAs
fig|6666666.230104.rna.100 RNA JNHN01000177.1 35104 35032 -1 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.230104.rna.101 RNA JNHN01000178.1 66390 66303 -3 - 88 tRNA-Ser-GGA tRNAs
fig|6666666.230104.rna.102 RNA JNHN01000178.1 118697 118622 -2 - 76 tRNA-Arg-CCG tRNAs
fig|6666666.230104.rna.103 RNA JNHN01000179.1 37480 37552 1 + 73 tRNA-Gly-CCC tRNAs
fig|6666666.230104.rna.104 RNA JNHN01000179.1 129972 130048 3 + 77 tRNA-Arg-TCT - none -
fig|6666666.230104.rna.105 RNA JNHN01000179.1 186197 186125 -2 - 73 tRNA-Lys-CTT - none -
fig|6666666.230104.rna.106 RNA JNHN01000179.1 210667 210741 1 + 75 tRNA-Pro-TGG - none -
fig|6666666.230104.rna.107 RNA JNHN01000179.1 267011 266935 -2 - 77 tRNA-Arg-ACG tRNAs
fig|6666666.230104.rna.108 RNA JNHN01000179.1 267108 267032 -3 - 77 tRNA-Arg-ACG tRNAs
fig|6666666.230104.rna.109 RNA JNHN01000179.1 533603 533494 -2 - 110 5S RNA - none -
fig|6666666.230104.rna.110 RNA JNHN01000179.1 536547 533727 -3 - 2821 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.230104.rna.111 RNA JNHN01000179.1 536742 536669 -3 - 74 tRNA-Ala-TGC - none -
fig|6666666.230104.rna.112 RNA JNHN01000179.1 536906 536833 -2 - 74 tRNA-Ile-GAT - none -
fig|6666666.230104.rna.113 RNA JNHN01000179.1 538433 537040 -2 - 1394 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.230104.rna.114 RNA JNHN01000180.1 3812 3887 2 + 76 tRNA-Met-CAT - none -
fig|6666666.230104.rna.115 RNA JNHN01000180.1 16586 16477 -2 - 110 5S RNA - none -
fig|6666666.230104.rna.116 RNA JNHN01000180.1 19530 16710 -3 - 2821 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.230104.rna.117 RNA JNHN01000180.1 19725 19652 -3 - 74 tRNA-Ala-TGC - none -
fig|6666666.230104.rna.118 RNA JNHN01000180.1 19889 19816 -2 - 74 tRNA-Ile-GAT - none -
fig|6666666.230104.rna.119 RNA JNHN01000180.1 21416 20023 -2 - 1394 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.230104.rna.120 RNA JNHN01000181.1 160 51 -1 - 110 5S RNA - none -
fig|6666666.230104.rna.121 RNA JNHN01000181.1 3104 284 -2 - 2821 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.230104.rna.122 RNA JNHN01000181.1 3299 3226 -2 - 74 tRNA-Ala-TGC - none -
fig|6666666.230104.rna.123 RNA JNHN01000181.1 3463 3390 -1 - 74 tRNA-Ile-GAT - none -
fig|6666666.230104.rna.124 RNA JNHN01000181.1 5131 3597 -1 - 1535 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.230104.rna.125 RNA JNHN01000182.1 11352 11277 -3 - 76 tRNA-Trp-CCA tRNAs
fig|6666666.230104.rna.126 RNA JNHN01000182.1 12715 12644 -1 - 72 tRNA-Thr-GGT - none -
fig|6666666.230104.rna.127 RNA JNHN01000182.1 12815 12730 -2 - 86 tRNA-Tyr-GTA - none -
fig|6666666.230104.rna.128 RNA JNHN01000182.1 13013 12940 -2 - 74 tRNA-Thr-TGT - none -
fig|6666666.230104.rna.129 RNA JNHN01000183.1 8911 8987 1 + 77 tRNA-Asn-GTT - none -
fig|6666666.230104.rna.130 RNA JNHN01000183.1 9006 9082 3 + 77 tRNA-Asn-GTT - none -
fig|6666666.230104.rna.131 RNA JNHN01000183.1 9101 9177 2 + 77 tRNA-Asn-GTT - none -
fig|6666666.230104.rna.132 RNA JNHN01000183.1 9196 9272 1 + 77 tRNA-Asn-GTT - none -
fig|6666666.230104.rna.133 RNA JNHN01000183.1 9291 9367 3 + 77 tRNA-Asn-GTT - none -
fig|6666666.230104.rna.134 RNA JNHN01000183.1 9386 9462 2 + 77 tRNA-Asn-GTT - none -
fig|6666666.230104.rna.135 RNA JNHN01000183.1 9481 9557 1 + 77 tRNA-Asn-GTT - none -
fig|6666666.230104.rna.136 RNA JNHN01000183.1 9576 9652 3 + 77 tRNA-Asn-GTT - none -
fig|6666666.230104.rna.137 RNA JNHN01000183.1 9671 9747 2 + 77 tRNA-Asn-GTT - none -
fig|6666666.230104.rna.138 RNA JNHN01000183.1 9766 9842 1 + 77 tRNA-Asn-GTT - none -
fig|6666666.230104.rna.139 RNA JNHN01000183.1 9861 9937 3 + 77 tRNA-Asn-GTT - none -
fig|6666666.230104.rna.140 RNA JNHN01000183.1 9956 10032 2 + 77 tRNA-Asn-GTT - none -
fig|6666666.230104.rna.141 RNA JNHN01000183.1 10051 10127 1 + 77 tRNA-Asn-GTT - none -
fig|6666666.230104.rna.142 RNA JNHN01000183.1 10146 10222 3 + 77 tRNA-Asn-GTT - none -
fig|6666666.230104.rna.143 RNA JNHN01000183.1 10241 10317 2 + 77 tRNA-Asn-GTT - none -
fig|6666666.230104.rna.144 RNA JNHN01000184.1 4596 4525 -3 - 72 tRNA-Arg-CCT - none -
fig|6666666.230104.rna.145 RNA JNHN01000184.1 79685 79761 2 + 77 tRNA-Met-CAT - none -
fig|6666666.230104.rna.146 RNA JNHN01000184.1 217531 217458 -1 - 74 tRNA-Gln-TTG - none -
fig|6666666.230104.rna.147 RNA JNHN01000185.1 333 1 -3 - 333 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -