fig|6666666.230106.peg.1 CDS DS362217.1 431 24 -2 - 408 FIG00414131: hypothetical protein - none -
fig|6666666.230106.peg.2 CDS DS362217.1 1191 1307 3 + 117 Esterase - none -
fig|6666666.230106.peg.3 CDS DS362218.1 2101 1277 -1 - 825 ATPase - none -
fig|6666666.230106.peg.4 CDS DS362218.1 2615 5368 2 + 2754 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.230106.peg.5 CDS DS362219.1 998 1369 2 + 372 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) N-linked Glycosylation in Bacteria
fig|6666666.230106.peg.6 CDS DS362220.1 2121 4427 3 + 2307 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.7 CDS DS362220.1 4535 6181 2 + 1647 FIG00407931: hypothetical protein - none -
fig|6666666.230106.peg.8 CDS DS362220.1 6599 6246 -2 - 354 Aspartate 1-decarboxylase (EC 4.1.1.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.230106.peg.9 CDS DS362220.1 7489 6632 -1 - 858 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.230106.peg.10 CDS DS362220.1 7868 8560 2 + 693 Similar to glycogen synthase (EC 2.4.1.21) - none -
fig|6666666.230106.peg.11 CDS DS362220.1 8584 10167 1 + 1584 FIG00898509: hypothetical protein - none -
fig|6666666.230106.peg.12 CDS DS362220.1 11663 10248 -2 - 1416 Alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.230106.peg.13 CDS DS362220.1 12937 11681 -1 - 1257 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230106.peg.14 CDS DS362220.1 14760 12964 -3 - 1797 Putative glycogen debranching enzyme, archaeal type, TIGR01561 Glycogen metabolism
fig|6666666.230106.peg.15 CDS DS362220.1 14725 14895 1 + 171 FIG00417011: hypothetical protein - none -
fig|6666666.230106.peg.16 CDS DS362220.1 15075 15764 3 + 690 PROBABLE INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.230106.peg.17 CDS DS362220.1 15875 16528 2 + 654 Hcp transcriptional regulator HcpR (Crp/Fnr family) Nitrosative stress
fig|6666666.230106.peg.18 CDS DS362220.1 17235 16549 -3 - 687 Lipolytic enzyme, G-D-S-L precursor - none -
fig|6666666.230106.peg.19 CDS DS362220.1 18624 17317 -3 - 1308 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.230106.peg.20 CDS DS362220.1 20217 18664 -3 - 1554 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.230106.peg.21 CDS DS362220.1 20546 20424 -2 - 123 hypothetical protein - none -
fig|6666666.230106.peg.22 CDS DS362220.1 21114 20680 -3 - 435 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.230106.peg.23 CDS DS362220.1 21099 22265 3 + 1167 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.230106.peg.24 CDS DS362220.1 22367 24463 2 + 2097 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.230106.peg.25 CDS DS362220.1 24499 24975 1 + 477 FIG00405147: hypothetical protein - none -
fig|6666666.230106.peg.26 CDS DS362220.1 24985 25446 1 + 462 dCMP deaminase (EC 3.5.4.12) - none -
fig|6666666.230106.peg.27 CDS DS362220.1 25504 27243 1 + 1740 Carboxy-terminal processing protease - none -
fig|6666666.230106.peg.28 CDS DS362220.1 27197 27691 2 + 495 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.230106.peg.29 CDS DS362220.1 27688 28473 1 + 786 Histidinol-phosphatase (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.230106.peg.30 CDS DS362220.1 28756 28466 -1 - 291 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.230106.peg.31 CDS DS362220.1 29865 28753 -3 - 1113 DNA recombination and repair protein RecF CBSS-226186.1.peg.4253;
Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.230106.peg.32 CDS DS362220.1 30103 30786 1 + 684 FIG170660: TPR domain protein CBSS-226186.1.peg.4253
fig|6666666.230106.peg.33 CDS DS362220.1 30852 31424 3 + 573 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.230106.peg.34 CDS DS362220.1 32092 31796 -1 - 297 hypothetical protein - none -
fig|6666666.230106.peg.35 CDS DS362220.1 32266 32829 1 + 564 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230106.peg.36 CDS DS362220.1 32834 34084 2 + 1251 Acyltransferase - none -
fig|6666666.230106.peg.37 CDS DS362220.1 34545 34180 -3 - 366 FIG00406892: hypothetical protein - none -
fig|6666666.230106.peg.38 CDS DS362220.1 37313 34737 -2 - 2577 FIG00405611: hypothetical protein - none -
fig|6666666.230106.peg.39 CDS DS362220.1 39027 37318 -3 - 1710 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230106.peg.40 CDS DS362220.1 41737 39128 -1 - 2610 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.41 CDS DS362220.1 42962 41775 -2 - 1188 FIG00411772: hypothetical protein - none -
fig|6666666.230106.peg.42 CDS DS362220.1 44177 42981 -2 - 1197 FIG00417587: hypothetical protein - none -
fig|6666666.230106.peg.43 CDS DS362220.1 45751 44261 -1 - 1491 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.44 CDS DS362220.1 49015 45764 -1 - 3252 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.45 CDS DS362220.1 51666 49105 -3 - 2562 FIG00405611: hypothetical protein - none -
fig|6666666.230106.peg.46 CDS DS362220.1 53102 51678 -2 - 1425 Arabinose-proton symporter L-Arabinose utilization
fig|6666666.230106.peg.47 CDS DS362220.1 53902 53117 -1 - 786 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.230106.peg.48 CDS DS362220.1 55658 53895 -2 - 1764 mannose-6-phosphate isomerase, class I - none -
fig|6666666.230106.peg.49 CDS DS362220.1 56595 55642 -3 - 954 Glucokinase (EC 2.7.1.2) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.230106.peg.50 CDS DS362220.1 57170 56598 -2 - 573 Glucose-6-phosphate isomerase, archaeal (EC 5.3.1.9) - none -
fig|6666666.230106.peg.51 CDS DS362220.1 58234 57344 -1 - 891 transcriptional regulator - none -
fig|6666666.230106.peg.52 CDS DS362220.1 58416 59306 3 + 891 putative transporter - none -
fig|6666666.230106.peg.53 CDS DS362220.1 59952 59293 -3 - 660 FIG00408484: hypothetical protein - none -
fig|6666666.230106.peg.54 CDS DS362220.1 60419 59949 -2 - 471 GAF domain-containing protein, involved in signal transduction - none -
fig|6666666.230106.peg.55 CDS DS362220.1 61330 60431 -1 - 900 putative permease - none -
fig|6666666.230106.peg.56 CDS DS362220.1 62152 61400 -1 - 753 tRNA pseudouridine synthase A (EC 4.2.1.70) Colicin V and Bacteriocin Production Cluster;
RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.230106.peg.57 CDS DS362220.1 62388 62266 -3 - 123 hypothetical protein - none -
fig|6666666.230106.peg.58 CDS DS362220.1 62360 62956 2 + 597 FIG00937167: hypothetical protein - none -
fig|6666666.230106.peg.59 CDS DS362220.1 63537 62974 -3 - 564 hypothetical protein - none -
fig|6666666.230106.peg.60 CDS DS362220.1 65078 63567 -2 - 1512 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.230106.peg.61 CDS DS362220.1 65211 65086 -3 - 126 hypothetical protein - none -
fig|6666666.230106.peg.62 CDS DS362220.1 65468 67006 2 + 1539 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.230106.peg.63 CDS DS362220.1 67048 67584 1 + 537 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.230106.peg.64 CDS DS362220.1 67627 68199 1 + 573 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.230106.peg.65 CDS DS362220.1 68214 69395 3 + 1182 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.230106.peg.66 CDS DS362220.1 69419 70219 2 + 801 COG1496: Uncharacterized conserved protein - none -
fig|6666666.230106.peg.67 CDS DS362220.1 70219 70884 1 + 666 FIG00935912: hypothetical protein - none -
fig|6666666.230106.peg.68 CDS DS362220.1 70885 71604 1 + 720 Cell wall endopeptidase, family M23/M37 - none -
fig|6666666.230106.peg.69 CDS DS362220.1 71614 72615 1 + 1002 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.230106.peg.70 CDS DS362220.1 72643 73584 1 + 942 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.230106.peg.71 CDS DS362220.1 73585 74322 1 + 738 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) - none -
fig|6666666.230106.peg.72 CDS DS362220.1 74354 74908 2 + 555 FIG00406579: hypothetical protein - none -
fig|6666666.230106.peg.73 CDS DS362220.1 74957 75703 2 + 747 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.230106.peg.74 CDS DS362220.1 75703 76698 1 + 996 Hydrolases of the alpha/beta superfamily - none -
fig|6666666.230106.peg.75 CDS DS362220.1 76739 77647 2 + 909 Beta-propeller domains of methanol dehydrogenase type - none -
fig|6666666.230106.peg.76 CDS DS362220.1 77819 78400 2 + 582 LemA family protein - none -
fig|6666666.230106.peg.77 CDS DS362220.1 78531 79682 3 + 1152 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.230106.peg.78 CDS DS362220.1 79687 80799 1 + 1113 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.230106.peg.79 CDS DS362220.1 80834 81664 2 + 831 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.230106.peg.80 CDS DS362220.1 81671 82897 2 + 1227 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.230106.peg.81 CDS DS362220.1 82982 84022 2 + 1041 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.191) - none -
fig|6666666.230106.peg.82 CDS DS362220.1 84026 85411 2 + 1386 N-acetylglucosamine deacetylase (EC 3.5.1.-) / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.230106.peg.83 CDS DS362220.1 85549 86325 1 + 777 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) Llipid A biosynthesis cluster
fig|6666666.230106.peg.84 CDS DS362220.1 86374 86928 1 + 555 FIG00897033: hypothetical protein - none -
fig|6666666.230106.peg.85 CDS DS362220.1 87037 87942 1 + 906 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.230106.peg.86 CDS DS362220.1 88919 87918 -2 - 1002 FIG00407219: hypothetical protein - none -
fig|6666666.230106.peg.87 CDS DS362220.1 89349 89501 3 + 153 hypothetical protein - none -
fig|6666666.230106.peg.88 CDS DS362220.1 89794 89666 -1 - 129 hypothetical protein - none -
fig|6666666.230106.peg.89 CDS DS362220.1 90294 90437 3 + 144 hypothetical protein - none -
fig|6666666.230106.peg.90 CDS DS362220.1 90450 90689 3 + 240 hypothetical protein - none -
fig|6666666.230106.peg.91 CDS DS362220.1 90713 91138 2 + 426 FIG00899057: hypothetical protein - none -
fig|6666666.230106.peg.92 CDS DS362220.1 91210 92412 1 + 1203 hypothetical protein - none -
fig|6666666.230106.peg.93 CDS DS362220.1 93227 92730 -2 - 498 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.94 CDS DS362220.1 93477 93310 -3 - 168 hypothetical protein - none -
fig|6666666.230106.peg.95 CDS DS362220.1 94147 93497 -1 - 651 TraD - none -
fig|6666666.230106.peg.96 CDS DS362220.1 94613 94167 -2 - 447 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.97 CDS DS362220.1 95376 94618 -3 - 759 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.98 CDS DS362220.1 96127 96546 1 + 420 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.99 CDS DS362220.1 96531 97784 3 + 1254 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.100 CDS DS362220.1 97822 98106 1 + 285 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.101 CDS DS362220.1 98162 98287 2 + 126 hypothetical protein - none -
fig|6666666.230106.peg.102 CDS DS362220.1 99178 98363 -1 - 816 hypothetical protein - none -
fig|6666666.230106.peg.103 CDS DS362220.1 100061 99192 -2 - 870 hypothetical protein - none -
fig|6666666.230106.peg.104 CDS DS362220.1 102100 100061 -1 - 2040 hypothetical protein - none -
fig|6666666.230106.peg.105 CDS DS362220.1 103706 102090 -2 - 1617 hypothetical protein - none -
fig|6666666.230106.peg.106 CDS DS362220.1 104647 103709 -1 - 939 hypothetical protein - none -
fig|6666666.230106.peg.107 CDS DS362220.1 107367 104650 -3 - 2718 Protease - none -
fig|6666666.230106.peg.108 CDS DS362220.1 110182 107372 -1 - 2811 Putative virulence factor - none -
fig|6666666.230106.peg.109 CDS DS362220.1 113274 110200 -3 - 3075 SrfB - none -
fig|6666666.230106.peg.110 CDS DS362220.1 114020 113289 -2 - 732 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230106.peg.111 CDS DS362220.1 115172 114777 -2 - 396 hypothetical protein - none -
fig|6666666.230106.peg.112 CDS DS362220.1 116082 115174 -3 - 909 Mobile element protein - none -
fig|6666666.230106.peg.113 CDS DS362220.1 117012 116644 -3 - 369 FIG00407219: hypothetical protein - none -
fig|6666666.230106.peg.114 CDS DS362220.1 117884 117114 -2 - 771 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes
fig|6666666.230106.peg.115 CDS DS362220.1 119978 117897 -2 - 2082 Regulatory sensor-transducer, BlaR1/MecR1 family / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.116 CDS DS362220.1 121894 120029 -1 - 1866 Thiol:disulfide interchange protein tlpA - none -
fig|6666666.230106.peg.117 CDS DS362220.1 122286 121924 -3 - 363 Transcriptional repressor, BlaI/MecI family - none -
fig|6666666.230106.peg.118 CDS DS362220.1 122497 123201 1 + 705 FIG00898025: hypothetical protein - none -
fig|6666666.230106.peg.119 CDS DS362220.1 123191 123805 2 + 615 Transcriptional regulator - none -
fig|6666666.230106.peg.120 CDS DS362220.1 126063 124237 -3 - 1827 Putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes
fig|6666666.230106.peg.121 CDS DS362220.1 127483 126317 -1 - 1167 RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein - none -
fig|6666666.230106.peg.122 CDS DS362220.1 128253 127537 -3 - 717 FIG00896915: hypothetical protein - none -
fig|6666666.230106.peg.123 CDS DS362220.1 129489 128278 -3 - 1212 FIG00897404: hypothetical protein - none -
fig|6666666.230106.peg.124 CDS DS362220.1 130955 129519 -2 - 1437 Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites - none -
fig|6666666.230106.peg.125 CDS DS362220.1 132213 131062 -3 - 1152 FIG00405865: hypothetical protein - none -
fig|6666666.230106.peg.126 CDS DS362220.1 133625 132243 -2 - 1383 FIG00896529: hypothetical protein - none -
fig|6666666.230106.peg.127 CDS DS362220.1 133914 133801 -3 - 114 hypothetical protein - none -
fig|6666666.230106.peg.128 CDS DS362220.1 134149 133943 -1 - 207 FIG00418171: hypothetical protein - none -
fig|6666666.230106.peg.129 CDS DS362220.1 135574 134216 -1 - 1359 Hydrolase (HAD superfamily) - none -
fig|6666666.230106.peg.130 CDS DS362220.1 136543 135587 -1 - 957 Membrane protease subunits, stomatin/prohibitin homologs - none -
fig|6666666.230106.peg.131 CDS DS362220.1 139338 136741 -3 - 2598 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.132 CDS DS362220.1 141829 139424 -1 - 2406 FIG00409332: hypothetical protein - none -
fig|6666666.230106.peg.133 CDS DS362220.1 143636 142002 -2 - 1635 FIG00414760: hypothetical protein - none -
fig|6666666.230106.peg.134 CDS DS362220.1 144831 143662 -3 - 1170 Cystathionine beta-lyase, Bsu PatB (EC 4.4.1.8) - none -
fig|6666666.230106.peg.135 CDS DS362220.1 145531 144917 -1 - 615 FIG00415643: hypothetical protein - none -
fig|6666666.230106.peg.136 CDS DS362220.1 146421 145528 -3 - 894 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.230106.peg.137 CDS DS362220.1 146509 147309 1 + 801 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.230106.peg.138 CDS DS362220.1 147322 149064 1 + 1743 putative helicase - none -
fig|6666666.230106.peg.139 CDS DS362220.1 149133 149747 3 + 615 Hypothetical YciO protein, TsaC/YrdC paralog - none -
fig|6666666.230106.peg.140 CDS DS362220.1 149824 150846 1 + 1023 membrane protein, putative - none -
fig|6666666.230106.peg.141 CDS DS362220.1 152056 150851 -1 - 1206 FIG00403110: hypothetical protein - none -
fig|6666666.230106.peg.142 CDS DS362220.1 152963 152115 -2 - 849 serine/threonine kinase - none -
fig|6666666.230106.peg.143 CDS DS362220.1 154372 153062 -1 - 1311 putative hemolysin secretion protein - none -
fig|6666666.230106.peg.144 CDS DS362220.1 156310 154376 -1 - 1935 ABC transporter ATP-binding protein - none -
fig|6666666.230106.peg.145 CDS DS362220.1 157816 156581 -1 - 1236 FIG00414945: hypothetical protein - none -
fig|6666666.230106.peg.146 CDS DS362220.1 159288 157837 -3 - 1452 putative Fe-S oxidoreductase - none -
fig|6666666.230106.peg.147 CDS DS362220.1 160620 159292 -3 - 1329 FIG00411283: hypothetical protein - none -
fig|6666666.230106.peg.148 CDS DS362220.1 162078 161065 -3 - 1014 FIG00415953: hypothetical protein - none -
fig|6666666.230106.peg.149 CDS DS362220.1 163129 162080 -1 - 1050 FIG00408819: hypothetical protein - none -
fig|6666666.230106.peg.150 CDS DS362220.1 163480 163178 -1 - 303 hypothetical protein - none -
fig|6666666.230106.peg.151 CDS DS362220.1 163479 163619 3 + 141 hypothetical protein - none -
fig|6666666.230106.peg.152 CDS DS362220.1 165428 163734 -2 - 1695 FIG00414546: hypothetical protein - none -
fig|6666666.230106.peg.153 CDS DS362220.1 165541 165425 -1 - 117 hypothetical protein - none -
fig|6666666.230106.peg.154 CDS DS362220.1 166879 166229 -1 - 651 FIG00415953: hypothetical protein - none -
fig|6666666.230106.peg.155 CDS DS362220.1 170134 166928 -1 - 3207 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.156 CDS DS362220.1 171606 170134 -3 - 1473 outer membrane protein TolC, putative - none -
fig|6666666.230106.peg.157 CDS DS362220.1 174674 171603 -2 - 3072 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA Cobalt-zinc-cadmium resistance;
Cobalt-zinc-cadmium resistance
fig|6666666.230106.peg.158 CDS DS362220.1 175790 174711 -2 - 1080 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.230106.peg.159 CDS DS362220.1 177603 175909 -3 - 1695 FIG00896341: hypothetical protein - none -
fig|6666666.230106.peg.160 CDS DS362220.1 179584 177626 -1 - 1959 FIG00403120: hypothetical protein - none -
fig|6666666.230106.peg.161 CDS DS362220.1 181549 179630 -1 - 1920 FIG00403120: hypothetical protein - none -
fig|6666666.230106.peg.162 CDS DS362220.1 182441 181551 -2 - 891 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.230106.peg.163 CDS DS362220.1 183341 182454 -2 - 888 FIG00899164: hypothetical protein - none -
fig|6666666.230106.peg.164 CDS DS362220.1 184453 183386 -1 - 1068 hypothetical protein - none -
fig|6666666.230106.peg.165 CDS DS362220.1 184990 184757 -1 - 234 hypothetical protein - none -
fig|6666666.230106.peg.166 CDS DS362220.1 186327 185260 -3 - 1068 FIG00898411: hypothetical protein - none -
fig|6666666.230106.peg.167 CDS DS362220.1 187687 186671 -1 - 1017 hypothetical protein - none -
fig|6666666.230106.peg.168 CDS DS362220.1 189400 187835 -1 - 1566 FIG00417169: hypothetical protein - none -
fig|6666666.230106.peg.169 CDS DS362220.1 190678 189866 -1 - 813 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Sialic Acid Metabolism
fig|6666666.230106.peg.170 CDS DS362220.1 191956 190757 -1 - 1200 Alkyldihydroxyacetonephosphate synthase (EC 2.5.1.26) - none -
fig|6666666.230106.peg.171 CDS DS362220.1 192948 192019 -3 - 930 COG1242: Predicted Fe-S oxidoreductase - none -
fig|6666666.230106.peg.172 CDS DS362220.1 192938 193069 2 + 132 hypothetical protein - none -
fig|6666666.230106.peg.173 CDS DS362220.1 193264 194223 1 + 960 Glucokinase (EC 2.7.1.2) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.230106.peg.174 CDS DS362220.1 194216 195367 2 + 1152 FIG00406514: hypothetical protein - none -
fig|6666666.230106.peg.175 CDS DS362220.1 195400 196161 1 + 762 UPF0309 protein SCO4393 - none -
fig|6666666.230106.peg.176 CDS DS362220.1 196363 198576 1 + 2214 Dipeptidyl peptidase IV - none -
fig|6666666.230106.peg.177 CDS DS362220.1 198576 199457 3 + 882 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.230106.peg.178 CDS DS362220.1 199504 200622 1 + 1119 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions
fig|6666666.230106.peg.179 CDS DS362220.1 201292 200588 -1 - 705 Tetrapyrrole methylase family protein - none -
fig|6666666.230106.peg.180 CDS DS362220.1 202149 201292 -3 - 858 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.230106.peg.181 CDS DS362220.1 202511 203164 2 + 654 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.230106.peg.182 CDS DS362220.1 204483 203320 -3 - 1164 Protein-tyrosine-phosphatase (EC 3.1.3.48) - none -
fig|6666666.230106.peg.183 CDS DS362220.1 205968 204502 -3 - 1467 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.184 CDS DS362220.1 209297 205989 -2 - 3309 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.230106.peg.185 CDS DS362220.1 210539 209364 -2 - 1176 putative anti-sigma factor - none -
fig|6666666.230106.peg.186 CDS DS362220.1 211210 210644 -1 - 567 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.230106.peg.187 CDS DS362220.1 211678 213069 1 + 1392 PTS system, galactitol-specific IIC component (EC 2.7.1.69) - none -
fig|6666666.230106.peg.188 CDS DS362220.1 213097 214053 1 + 957 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230106.peg.189 CDS DS362220.1 214225 215685 1 + 1461 Hexuronate transporter D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230106.peg.190 CDS DS362220.1 219441 216007 -3 - 3435 DNA helicase - none -
fig|6666666.230106.peg.191 CDS DS362220.1 220259 219438 -2 - 822 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.230106.peg.192 CDS DS362220.1 220612 220397 -1 - 216 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.230106.peg.193 CDS DS362220.1 223249 220724 -1 - 2526 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) / Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
Pyruvate Alanine Serine Interconversions
fig|6666666.230106.peg.194 CDS DS362220.1 224214 223225 -3 - 990 FIG00404313: hypothetical protein - none -
fig|6666666.230106.peg.195 CDS DS362220.1 225483 224377 -3 - 1107 FIG00410004: hypothetical protein - none -
fig|6666666.230106.peg.196 CDS DS362220.1 225769 225981 1 + 213 hypothetical protein - none -
fig|6666666.230106.peg.197 CDS DS362220.1 226041 227945 3 + 1905 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.230106.peg.198 CDS DS362220.1 228012 229352 3 + 1341 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.230106.peg.199 CDS DS362220.1 229374 230825 3 + 1452 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.230106.peg.200 CDS DS362220.1 231175 231300 1 + 126 hypothetical protein - none -
fig|6666666.230106.peg.201 CDS DS362220.1 231519 231761 3 + 243 NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230106.peg.202 CDS DS362220.1 231752 232333 2 + 582 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230106.peg.203 CDS DS362220.1 232349 233938 2 + 1590 NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
NADH ubiquinone oxidoreductase;
Respiratory Complex I;
Respiratory Complex I
fig|6666666.230106.peg.204 CDS DS362220.1 234114 233980 -3 - 135 hypothetical protein - none -
fig|6666666.230106.peg.205 CDS DS362220.1 234070 235155 1 + 1086 NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230106.peg.206 CDS DS362220.1 235213 235716 1 + 504 NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230106.peg.207 CDS DS362220.1 235747 236259 1 + 513 NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230106.peg.208 CDS DS362220.1 236274 236573 3 + 300 NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230106.peg.209 CDS DS362220.1 236632 238545 1 + 1914 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230106.peg.210 CDS DS362220.1 238597 240081 1 + 1485 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230106.peg.211 CDS DS362220.1 240203 241642 2 + 1440 NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230106.peg.212 CDS DS362220.1 244600 241778 -1 - 2823 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.213 CDS DS362220.1 244802 247501 2 + 2700 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.214 CDS DS362220.1 247621 248802 1 + 1182 FIG00403577: hypothetical protein - none -
fig|6666666.230106.peg.215 CDS DS362220.1 249348 248923 -3 - 426 FIG00410367: hypothetical protein - none -
fig|6666666.230106.peg.216 CDS DS362220.1 249482 249607 2 + 126 hypothetical protein - none -
fig|6666666.230106.peg.217 CDS DS362220.1 250961 249684 -2 - 1278 Small-conductance mechanosensitive channel - none -
fig|6666666.230106.peg.218 CDS DS362220.1 252002 250989 -2 - 1014 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230106.peg.219 CDS DS362220.1 252844 252014 -1 - 831 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230106.peg.220 CDS DS362220.1 252985 253896 1 + 912 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.230106.peg.221 CDS DS362220.1 254479 253913 -1 - 567 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230106.peg.222 CDS DS362220.1 255625 254522 -1 - 1104 putative periplasmic protein kinase ArgK and related GTPases of G3E family G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.230106.peg.223 CDS DS362220.1 256748 255675 -2 - 1074 FIG00897161: hypothetical protein - none -
fig|6666666.230106.peg.224 CDS DS362220.1 262757 256890 -2 - 5868 FIG00403134: hypothetical protein - none -
fig|6666666.230106.peg.225 CDS DS362220.1 264948 263491 -3 - 1458 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.230106.peg.226 CDS DS362220.1 266305 265319 -1 - 987 putative dolichol-P-glucose synthetase - none -
fig|6666666.230106.peg.227 CDS DS362220.1 266441 267235 2 + 795 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) ECSIG4-SIG7;
RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.230106.peg.228 CDS DS362220.1 267262 268608 1 + 1347 Magnesium transporter - none -
fig|6666666.230106.peg.229 CDS DS362220.1 268726 270579 1 + 1854 FIG00896368: hypothetical protein - none -
fig|6666666.230106.peg.230 CDS DS362220.1 271843 270665 -1 - 1179 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.230106.peg.231 CDS DS362220.1 272315 272674 2 + 360 Ribosomal silencing factor RsfA (former Iojap) - none -
fig|6666666.230106.peg.232 CDS DS362220.1 272684 274696 2 + 2013 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.230106.peg.233 CDS DS362220.1 274686 275528 3 + 843 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230106.peg.234 CDS DS362220.1 276350 275646 -2 - 705 FIG00411266: hypothetical protein - none -
fig|6666666.230106.peg.235 CDS DS362220.1 276447 276328 -3 - 120 hypothetical protein - none -
fig|6666666.230106.peg.236 CDS DS362220.1 277639 276494 -1 - 1146 Lipid-A-disaccharide synthase (EC 2.4.1.182) Llipid A biosynthesis cluster
fig|6666666.230106.peg.237 CDS DS362220.1 278428 277664 -1 - 765 5-nucleotidase SurE (EC 3.1.3.5) Housecleaning nucleoside triphosphate pyrophosphatases;
Stationary phase repair cluster
fig|6666666.230106.peg.238 CDS DS362220.1 278579 278460 -2 - 120 hypothetical protein - none -
fig|6666666.230106.peg.239 CDS DS362220.1 278586 280022 3 + 1437 FIG00897336: hypothetical protein - none -
fig|6666666.230106.peg.240 CDS DS362220.1 280068 280541 3 + 474 probable membrane protein NMA1128 - none -
fig|6666666.230106.peg.241 CDS DS362220.1 280499 280615 2 + 117 hypothetical protein - none -
fig|6666666.230106.peg.242 CDS DS362220.1 280981 281733 1 + 753 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.230106.peg.243 CDS DS362220.1 281841 282725 3 + 885 Chromosome (plasmid) partitioning protein ParB Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.230106.peg.244 CDS DS362220.1 282726 283505 3 + 780 FIG00937393: hypothetical protein - none -
fig|6666666.230106.peg.245 CDS DS362220.1 283537 284853 1 + 1317 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.230106.peg.246 CDS DS362220.1 284930 287188 2 + 2259 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.230106.peg.247 CDS DS362220.1 287595 287206 -3 - 390 Transcriptional regulator - none -
fig|6666666.230106.peg.248 CDS DS362220.1 288593 287625 -2 - 969 Peptidase, family M23 (EC 3.4.24.-) CBSS-226186.1.peg.3994
fig|6666666.230106.peg.249 CDS DS362220.1 288765 291383 3 + 2619 Alanyl-tRNA synthetase (EC 6.1.1.7) CBSS-226186.1.peg.3994;
Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.230106.peg.250 CDS DS362220.1 292646 291837 -2 - 810 FIG00410196: hypothetical protein - none -
fig|6666666.230106.peg.251 CDS DS362220.1 294015 292723 -3 - 1293 RecD-like DNA helicase Atu2026 - none -
fig|6666666.230106.peg.252 CDS DS362220.1 294309 294923 3 + 615 FIG036016: hypothetical protein CBSS-226186.1.peg.3978
fig|6666666.230106.peg.253 CDS DS362220.1 294942 295721 3 + 780 FIG032012: hypothetical protein CBSS-226186.1.peg.3978
fig|6666666.230106.peg.254 CDS DS362220.1 295754 296245 2 + 492 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-226186.1.peg.3978;
CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.230106.peg.255 CDS DS362220.1 297745 296306 -1 - 1440 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230106.peg.256 CDS DS362220.1 300940 298016 -1 - 2925 FIG00897756: hypothetical protein - none -
fig|6666666.230106.peg.257 CDS DS362220.1 301461 301048 -3 - 414 FIG00404342: hypothetical protein - none -
fig|6666666.230106.peg.258 CDS DS362220.1 301621 301475 -1 - 147 hypothetical protein - none -
fig|6666666.230106.peg.259 CDS DS362220.1 301669 302730 1 + 1062 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.230106.peg.260 CDS DS362220.1 303089 302706 -2 - 384 FIG00407350: hypothetical protein - none -
fig|6666666.230106.peg.261 CDS DS362220.1 303623 303093 -2 - 531 FIG00414200: hypothetical protein - none -
fig|6666666.230106.peg.262 CDS DS362220.1 303760 303620 -1 - 141 hypothetical protein - none -
fig|6666666.230106.peg.263 CDS DS362220.1 303997 304746 1 + 750 FIG00417123: hypothetical protein - none -
fig|6666666.230106.peg.264 CDS DS362220.1 306004 305351 -1 - 654 hypothetical protein - none -
fig|6666666.230106.peg.265 CDS DS362220.1 307350 306568 -3 - 783 Mobile element protein - none -
fig|6666666.230106.peg.266 CDS DS362220.1 308455 307337 -1 - 1119 Mobile element protein - none -
fig|6666666.230106.peg.267 CDS DS362220.1 308918 308442 -2 - 477 Mobile element protein - none -
fig|6666666.230106.peg.268 CDS DS362220.1 309589 309035 -1 - 555 Tyrosine type site-specific recombinase - none -
fig|6666666.230106.peg.269 CDS DS362220.1 312581 310413 -2 - 2169 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230106.peg.270 CDS DS362220.1 313377 312673 -3 - 705 hypothetical protein - none -
fig|6666666.230106.peg.271 CDS DS362220.1 313486 313370 -1 - 117 hypothetical protein - none -
fig|6666666.230106.peg.272 CDS DS362220.1 314702 313476 -2 - 1227 FIG00937589: hypothetical protein - none -
fig|6666666.230106.peg.273 CDS DS362220.1 315612 314920 -3 - 693 hypothetical protein - none -
fig|6666666.230106.peg.274 CDS DS362220.1 317530 315629 -1 - 1902 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.275 CDS DS362220.1 320769 317542 -3 - 3228 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.276 CDS DS362220.1 322083 321061 -3 - 1023 putative anti-sigma factor - none -
fig|6666666.230106.peg.277 CDS DS362220.1 322588 322085 -1 - 504 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.278 CDS DS362220.1 323371 322703 -1 - 669 putative acylhydrolase - none -
fig|6666666.230106.peg.279 CDS DS362220.1 324144 324545 3 + 402 hypothetical protein - none -
fig|6666666.230106.peg.280 CDS DS362220.1 324565 325011 1 + 447 hypothetical protein - none -
fig|6666666.230106.peg.281 CDS DS362220.1 325017 325925 3 + 909 hypothetical protein - none -
fig|6666666.230106.peg.282 CDS DS362220.1 325953 326624 3 + 672 hypothetical protein - none -
fig|6666666.230106.peg.283 CDS DS362220.1 328463 327462 -2 - 1002 hypothetical protein - none -
fig|6666666.230106.peg.284 CDS DS362220.1 328499 328630 2 + 132 hypothetical protein - none -
fig|6666666.230106.peg.285 CDS DS362220.1 328815 328651 -3 - 165 hypothetical protein - none -
fig|6666666.230106.peg.286 CDS DS362220.1 329696 330475 2 + 780 DnaJ-like protein DjlA - none -
fig|6666666.230106.peg.287 CDS DS362220.1 330552 333824 3 + 3273 putative Tricorn-like protease - none -
fig|6666666.230106.peg.288 CDS DS362220.1 334068 335603 3 + 1536 Predicted cobalt transporter in Bacteroides_Porphyromonas Coenzyme B12 biosynthesis
fig|6666666.230106.peg.289 CDS DS362220.1 335607 336614 3 + 1008 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.230106.peg.290 CDS DS362220.1 336598 337209 1 + 612 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.230106.peg.291 CDS DS362220.1 337604 337215 -2 - 390 FIG00413250: hypothetical protein - none -
fig|6666666.230106.peg.292 CDS DS362220.1 337782 339098 3 + 1317 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.230106.peg.293 CDS DS362220.1 339329 339781 2 + 453 FIG00935916: hypothetical protein - none -
fig|6666666.230106.peg.294 CDS DS362220.1 339832 340644 1 + 813 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.230106.peg.295 CDS DS362220.1 340658 341083 2 + 426 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA YjeE
fig|6666666.230106.peg.296 CDS DS362220.1 341131 341349 1 + 219 FIG00406966: hypothetical protein - none -
fig|6666666.230106.peg.297 CDS DS362220.1 341743 341411 -1 - 333 FIG00403617: hypothetical protein - none -
fig|6666666.230106.peg.298 CDS DS362220.1 342106 341855 -1 - 252 Thioredoxin CBSS-315749.4.peg.3658
fig|6666666.230106.peg.299 CDS DS362220.1 346133 342336 -2 - 3798 DNA polymerase III alpha subunit (EC 2.7.7.7) CBSS-350688.3.peg.1509
fig|6666666.230106.peg.300 CDS DS362220.1 346304 346990 2 + 687 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230106.peg.301 CDS DS362220.1 347004 347711 3 + 708 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230106.peg.302 CDS DS362220.1 347779 348078 1 + 300 FIG00405557: hypothetical protein - none -
fig|6666666.230106.peg.303 CDS DS362220.1 348543 348103 -3 - 441 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing
fig|6666666.230106.peg.304 CDS DS362220.1 348733 348563 -1 - 171 FIG00406074: hypothetical protein - none -
fig|6666666.230106.peg.305 CDS DS362220.1 349293 349084 -3 - 210 hypothetical protein - none -
fig|6666666.230106.peg.306 CDS DS362220.1 349370 350779 2 + 1410 Carboxyl-terminal protease - none -
fig|6666666.230106.peg.307 CDS DS362220.1 350779 351144 1 + 366 Endonuclease (EC 3.1.-.-) - none -
fig|6666666.230106.peg.308 CDS DS362220.1 351214 351570 1 + 357 FIG00898592: hypothetical protein - none -
fig|6666666.230106.peg.309 CDS DS362220.1 351554 352327 2 + 774 Biotin--protein ligase (EC 6.3.4.9, EC 6.3.4.10, EC 6.3.4.11, EC 6.3.4.15) - none -
fig|6666666.230106.peg.310 CDS DS362220.1 354896 352449 -2 - 2448 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.311 CDS DS362220.1 356534 354927 -2 - 1608 putative xylanase - none -
fig|6666666.230106.peg.312 CDS DS362220.1 358315 356654 -1 - 1662 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.313 CDS DS362220.1 361379 358329 -2 - 3051 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.314 CDS DS362220.1 363075 361402 -3 - 1674 FIG00405830: hypothetical protein - none -
fig|6666666.230106.peg.315 CDS DS362220.1 363126 365054 3 + 1929 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.316 CDS DS362220.1 365105 367066 2 + 1962 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.317 CDS DS362220.1 367829 367107 -2 - 723 TPR-domain containing protein - none -
fig|6666666.230106.peg.318 CDS DS362220.1 367931 369304 2 + 1374 DNA-damage-inducible protein F - none -
fig|6666666.230106.peg.319 CDS DS362220.1 369568 372090 1 + 2523 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.230106.peg.320 CDS DS362220.1 372179 373117 2 + 939 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.230106.peg.321 CDS DS362220.1 373140 373655 3 + 516 FIG00897869: hypothetical protein - none -
fig|6666666.230106.peg.322 CDS DS362220.1 373739 374449 2 + 711 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.230106.peg.323 CDS DS362220.1 374521 375123 1 + 603 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.230106.peg.324 CDS DS362220.1 375353 376162 2 + 810 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.230106.peg.325 CDS DS362220.1 376284 377366 3 + 1083 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.230106.peg.326 CDS DS362220.1 377407 380439 1 + 3033 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.327 CDS DS362220.1 380436 381761 3 + 1326 Agglutination protein - none -
fig|6666666.230106.peg.328 CDS DS362220.1 381810 383450 3 + 1641 Amino acid permease - none -
fig|6666666.230106.peg.329 CDS DS362220.1 384655 383498 -1 - 1158 Integral membrane protein - none -
fig|6666666.230106.peg.330 CDS DS362220.1 386667 385027 -3 - 1641 Fumarate hydratase class I, anaerobic (EC 4.2.1.2) Serine-glyoxylate cycle
fig|6666666.230106.peg.331 CDS DS362220.1 388792 386801 -1 - 1992 FIG00898950: hypothetical protein - none -
fig|6666666.230106.peg.332 CDS DS362220.1 390157 388901 -1 - 1257 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.230106.peg.333 CDS DS362220.1 391121 390345 -2 - 777 FIG00405392: hypothetical protein - none -
fig|6666666.230106.peg.334 CDS DS362220.1 392787 391153 -3 - 1635 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.335 CDS DS362220.1 395737 392807 -1 - 2931 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.336 CDS DS362220.1 396251 397471 2 + 1221 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.230106.peg.337 CDS DS362220.1 398520 397567 -3 - 954 hypothetical protein - none -
fig|6666666.230106.peg.338 CDS DS362220.1 400107 398551 -3 - 1557 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.339 CDS DS362220.1 403339 400172 -1 - 3168 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.340 CDS DS362221.1 1738 47 -1 - 1692 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.341 CDS DS362221.1 2423 1875 -2 - 549 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.342 CDS DS362221.1 3757 3614 -1 - 144 hypothetical protein - none -
fig|6666666.230106.peg.343 CDS DS362221.1 5272 4082 -1 - 1191 Integrase - none -
fig|6666666.230106.peg.344 CDS DS362221.1 5741 6472 2 + 732 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.345 CDS DS362221.1 7320 7493 3 + 174 Integrase - none -
fig|6666666.230106.peg.346 CDS DS362221.1 7692 8036 3 + 345 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.347 CDS DS362222.1 41 625 2 + 585 FIG00405000: hypothetical protein - none -
fig|6666666.230106.peg.348 CDS DS362222.1 612 803 3 + 192 hypothetical protein - none -
fig|6666666.230106.peg.349 CDS DS362222.1 2358 3497 3 + 1140 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.350 CDS DS362223.1 76 513 1 + 438 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.351 CDS DS362223.1 984 1451 3 + 468 FIG000325: clustered with transcription termination protein NusA CBSS-350688.3.peg.1509;
NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.230106.peg.352 CDS DS362223.1 1456 2721 1 + 1266 Transcription termination protein NusA CBSS-350688.3.peg.1509;
NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.230106.peg.353 CDS DS362223.1 2845 5892 1 + 3048 Translation initiation factor 2 CBSS-138119.3.peg.2719;
CBSS-350688.3.peg.1509;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.230106.peg.354 CDS DS362223.1 6046 6558 1 + 513 Colicin V production protein Colicin V and Bacteriocin Production Cluster
fig|6666666.230106.peg.355 CDS DS362223.1 6607 8061 1 + 1455 Iron-sulfur cluster assembly protein SufB Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.230106.peg.356 CDS DS362223.1 8180 8935 2 + 756 Iron-sulfur cluster assembly ATPase protein SufC Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.230106.peg.357 CDS DS362223.1 8953 10296 1 + 1344 Iron-sulfur cluster assembly protein SufD Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.230106.peg.358 CDS DS362223.1 10349 11584 2 + 1236 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.230106.peg.359 CDS DS362223.1 11655 11975 3 + 321 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.230106.peg.360 CDS DS362223.1 13145 12069 -2 - 1077 hypothetical protein - none -
fig|6666666.230106.peg.361 CDS DS362223.1 14152 13184 -1 - 969 hypothetical protein - none -
fig|6666666.230106.peg.362 CDS DS362223.1 14219 16423 2 + 2205 Pyrophosphate-energized proton pump (EC 3.6.1.1) Phosphate metabolism
fig|6666666.230106.peg.363 CDS DS362223.1 18021 16420 -3 - 1602 FIG00897230: hypothetical protein - none -
fig|6666666.230106.peg.364 CDS DS362223.1 21144 18034 -3 - 3111 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.365 CDS DS362223.1 22488 21547 -3 - 942 putative anti-sigma factor - none -
fig|6666666.230106.peg.366 CDS DS362223.1 23124 22579 -3 - 546 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.367 CDS DS362223.1 23290 23165 -1 - 126 hypothetical protein - none -
fig|6666666.230106.peg.368 CDS DS362223.1 25468 23324 -1 - 2145 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-1806.1.peg.3045;
CBSS-350688.3.peg.1509
fig|6666666.230106.peg.369 CDS DS362223.1 25676 26827 2 + 1152 FIG00897677: hypothetical protein - none -
fig|6666666.230106.peg.370 CDS DS362223.1 27027 27482 3 + 456 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.230106.peg.371 CDS DS362223.1 27532 27924 1 + 393 HIT family protein - none -
fig|6666666.230106.peg.372 CDS DS362223.1 29110 28025 -1 - 1086 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) Mannose Metabolism
fig|6666666.230106.peg.373 CDS DS362223.1 29527 30336 1 + 810 FIG00414340: hypothetical protein - none -
fig|6666666.230106.peg.374 CDS DS362223.1 31102 30362 -1 - 741 NERD domain protein - none -
fig|6666666.230106.peg.375 CDS DS362223.1 31555 31112 -1 - 444 hypothetical protein - none -
fig|6666666.230106.peg.376 CDS DS362223.1 32330 31611 -2 - 720 FIG00412337: hypothetical protein - none -
fig|6666666.230106.peg.377 CDS DS362223.1 34052 32649 -2 - 1404 mobilization protein - none -
fig|6666666.230106.peg.378 CDS DS362223.1 35220 34264 -3 - 957 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230106.peg.379 CDS DS362223.1 35243 35377 2 + 135 hypothetical protein - none -
fig|6666666.230106.peg.380 CDS DS362223.1 36642 35452 -3 - 1191 FIG00897594: hypothetical protein - none -
fig|6666666.230106.peg.381 CDS DS362223.1 36961 36647 -1 - 315 hypothetical protein - none -
fig|6666666.230106.peg.382 CDS DS362223.1 38072 37131 -2 - 942 hypothetical protein - none -
fig|6666666.230106.peg.383 CDS DS362223.1 39417 38080 -3 - 1338 Integrase IntN1 - none -
fig|6666666.230106.peg.384 CDS DS362223.1 39659 40516 2 + 858 FIG00416635: hypothetical protein - none -
fig|6666666.230106.peg.385 CDS DS362223.1 40928 40791 -2 - 138 hypothetical protein - none -
fig|6666666.230106.peg.386 CDS DS362223.1 40935 42134 3 + 1200 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.387 CDS DS362223.1 43104 42145 -3 - 960 FIG00414698: hypothetical protein - none -
fig|6666666.230106.peg.388 CDS DS362223.1 43453 46647 1 + 3195 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.389 CDS DS362223.1 46661 48340 2 + 1680 SusD, outer membrane protein Cellulosome
fig|6666666.230106.peg.390 CDS DS362223.1 48382 50352 1 + 1971 FIG00412438: hypothetical protein - none -
fig|6666666.230106.peg.391 CDS DS362223.1 50361 52982 3 + 2622 FIG01287877: hypothetical protein - none -
fig|6666666.230106.peg.392 CDS DS362223.1 54933 53377 -3 - 1557 Beta-xylosidase (EC 3.2.1.37) Xylose utilization
fig|6666666.230106.peg.393 CDS DS362223.1 55202 56980 2 + 1779 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230106.peg.394 CDS DS362223.1 57201 61283 3 + 4083 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.230106.peg.395 CDS DS362223.1 61422 64304 3 + 2883 Alpha-xylosidase (EC 3.2.1.-) Xylose utilization
fig|6666666.230106.peg.396 CDS DS362223.1 64467 66965 3 + 2499 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.397 CDS DS362223.1 67013 69226 2 + 2214 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.398 CDS DS362223.1 69432 69301 -3 - 132 hypothetical protein - none -
fig|6666666.230106.peg.399 CDS DS362223.1 69423 71885 3 + 2463 putative large secreted protein - none -
fig|6666666.230106.peg.400 CDS DS362223.1 71982 73478 3 + 1497 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.230106.peg.401 CDS DS362223.1 73495 74115 1 + 621 FIG00412153: hypothetical protein - none -
fig|6666666.230106.peg.402 CDS DS362223.1 74220 74774 3 + 555 ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17) - none -
fig|6666666.230106.peg.403 CDS DS362223.1 74845 75066 1 + 222 FIG00935798: hypothetical protein - none -
fig|6666666.230106.peg.404 CDS DS362223.1 75200 77635 2 + 2436 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.230106.peg.405 CDS DS362223.1 78065 77706 -2 - 360 probable uroporphyrin-III c-methyltransferase (EC 2.1.1.107) - none -
fig|6666666.230106.peg.406 CDS DS362223.1 78790 78062 -1 - 729 Nitric oxide-dependent regulator DnrN or NorA Iron-sulfur cluster assembly;
Nitrosative stress
fig|6666666.230106.peg.407 CDS DS362223.1 79568 79071 -2 - 498 FIG01201438: hypothetical protein - none -
fig|6666666.230106.peg.408 CDS DS362223.1 79730 80290 2 + 561 FIG00937641: hypothetical protein - none -
fig|6666666.230106.peg.409 CDS DS362223.1 80924 80364 -2 - 561 hypothetical protein - none -
fig|6666666.230106.peg.410 CDS DS362223.1 84257 81036 -2 - 3222 hypothetical protein - none -
fig|6666666.230106.peg.411 CDS DS362223.1 85688 84735 -2 - 954 Mobile element protein - none -
fig|6666666.230106.peg.412 CDS DS362223.1 85850 86956 2 + 1107 hypothetical protein - none -
fig|6666666.230106.peg.413 CDS DS362223.1 87926 86985 -2 - 942 HipA protein Persister Cells
fig|6666666.230106.peg.414 CDS DS362223.1 88258 87929 -1 - 330 FIG00406133: hypothetical protein - none -
fig|6666666.230106.peg.415 CDS DS362223.1 88479 88255 -3 - 225 transcriptional regulator, XRE family - none -
fig|6666666.230106.peg.416 CDS DS362223.1 89164 88937 -1 - 228 hypothetical protein - none -
fig|6666666.230106.peg.417 CDS DS362223.1 92493 89362 -3 - 3132 putative cell surface protein - none -
fig|6666666.230106.peg.418 CDS DS362223.1 93904 92957 -1 - 948 Mobile element protein - none -
fig|6666666.230106.peg.419 CDS DS362223.1 94242 96590 3 + 2349 putative cell surface protein - none -
fig|6666666.230106.peg.420 CDS DS362223.1 97323 96547 -3 - 777 hypothetical protein - none -
fig|6666666.230106.peg.421 CDS DS362223.1 97668 98822 3 + 1155 hypothetical protein - none -
fig|6666666.230106.peg.422 CDS DS362224.1 2847 2452 -3 - 396 hypothetical protein - none -
fig|6666666.230106.peg.423 CDS DS362224.1 3206 2868 -2 - 339 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.424 CDS DS362224.1 3371 3219 -2 - 153 hypothetical protein - none -
fig|6666666.230106.peg.425 CDS DS362224.1 4977 3625 -3 - 1353 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.426 CDS DS362224.1 5466 5140 -3 - 327 FIG00405000: hypothetical protein - none -
fig|6666666.230106.peg.427 CDS DS362224.1 5967 6368 3 + 402 ATPase - none -
fig|6666666.230106.peg.428 CDS DS362224.1 7003 6659 -1 - 345 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.429 CDS DS362225.1 1059 388 -3 - 672 FIG00417592: hypothetical protein - none -
fig|6666666.230106.peg.430 CDS DS362225.1 1588 1872 1 + 285 FIG00410851: hypothetical protein - none -
fig|6666666.230106.peg.431 CDS DS362225.1 2434 3036 1 + 603 FIG00410851: hypothetical protein - none -
fig|6666666.230106.peg.432 CDS DS362225.1 3357 4304 3 + 948 Ribulokinase (EC 2.7.1.16) L-Arabinose utilization
fig|6666666.230106.peg.433 CDS DS362225.1 4354 5514 1 + 1161 FIG00411978: hypothetical protein - none -
fig|6666666.230106.peg.434 CDS DS362225.1 5615 8833 2 + 3219 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.435 CDS DS362225.1 8895 10655 3 + 1761 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.436 CDS DS362225.1 10782 11093 3 + 312 hypothetical protein - none -
fig|6666666.230106.peg.437 CDS DS362225.1 11188 12558 1 + 1371 FIG00413844: hypothetical protein - none -
fig|6666666.230106.peg.438 CDS DS362225.1 12616 14712 1 + 2097 FIG00415226: hypothetical protein - none -
fig|6666666.230106.peg.439 CDS DS362225.1 14806 17718 1 + 2913 FIG00405611: hypothetical protein - none -
fig|6666666.230106.peg.440 CDS DS362226.1 280 2208 1 + 1929 hypothetical protein - none -
fig|6666666.230106.peg.441 CDS DS362227.1 260 48 -2 - 213 Mobile element protein - none -
fig|6666666.230106.peg.442 CDS DS362227.1 698 495 -2 - 204 hypothetical protein - none -
fig|6666666.230106.peg.443 CDS DS362227.1 874 1413 1 + 540 FIG00898398: hypothetical protein - none -
fig|6666666.230106.peg.444 CDS DS362227.1 1809 2222 3 + 414 hypothetical protein - none -
fig|6666666.230106.peg.445 CDS DS362227.1 2387 2770 2 + 384 FIG00899114: hypothetical protein - none -
fig|6666666.230106.peg.446 CDS DS362227.1 2929 3495 1 + 567 Mobile element protein - none -
fig|6666666.230106.peg.447 CDS DS362228.1 680 3553 2 + 2874 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.448 CDS DS362228.1 3574 5172 1 + 1599 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.449 CDS DS362228.1 6865 9240 1 + 2376 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.450 CDS DS362228.1 9259 10719 1 + 1461 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.451 CDS DS362228.1 10996 10868 -1 - 129 hypothetical protein - none -
fig|6666666.230106.peg.452 CDS DS362228.1 11354 10953 -2 - 402 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.230106.peg.453 CDS DS362228.1 11855 12439 2 + 585 FIG00405000: hypothetical protein - none -
fig|6666666.230106.peg.454 CDS DS362228.1 12426 12617 3 + 192 hypothetical protein - none -
fig|6666666.230106.peg.455 CDS DS362229.1 33 428 3 + 396 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.456 CDS DS362229.1 425 1165 2 + 741 Conjugative transposon protein TraD Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.457 CDS DS362229.1 1227 1529 3 + 303 Conjugative transposon protein TraE Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.458 CDS DS362229.1 1568 1885 2 + 318 Conjugative transposon protein TraF Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.459 CDS DS362229.1 1882 4386 1 + 2505 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.460 CDS DS362229.1 4388 4747 2 + 360 Conjugative transposon protein TraH Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.461 CDS DS362229.1 4754 5026 2 + 273 Conjugative transposon protein TraH Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.462 CDS DS362229.1 5085 5714 3 + 630 Conjugative transposon protein TraI Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.463 CDS DS362229.1 5721 6722 3 + 1002 Conjugative transposon protein TraJ Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.464 CDS DS362229.1 6752 7375 2 + 624 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.465 CDS DS362229.1 7378 7668 1 + 291 Conjugative transposon protein TraL Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.466 CDS DS362229.1 7674 9098 3 + 1425 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.467 CDS DS362229.1 9149 10153 2 + 1005 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.468 CDS DS362229.1 10155 10739 3 + 585 Conjugative transposon protein TraO Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.469 CDS DS362229.1 10749 11192 3 + 444 Conjugative transposon protein TraQ Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.470 CDS DS362229.1 11189 11755 2 + 567 Phage protein - none -
fig|6666666.230106.peg.471 CDS DS362229.1 11758 11871 1 + 114 hypothetical protein - none -
fig|6666666.230106.peg.472 CDS DS362229.1 12527 11934 -2 - 594 hypothetical protein - none -
fig|6666666.230106.peg.473 CDS DS362229.1 12777 12547 -3 - 231 hypothetical protein - none -
fig|6666666.230106.peg.474 CDS DS362229.1 13355 13639 2 + 285 hypothetical protein - none -
fig|6666666.230106.peg.475 CDS DS362229.1 14801 13968 -2 - 834 hypothetical protein - none -
fig|6666666.230106.peg.476 CDS DS362229.1 15746 14823 -2 - 924 Putative ribose phosphate pyrophosphokinase - none -
fig|6666666.230106.peg.477 CDS DS362229.1 16175 15828 -2 - 348 hypothetical protein - none -
fig|6666666.230106.peg.478 CDS DS362229.1 16164 16280 3 + 117 hypothetical protein - none -
fig|6666666.230106.peg.479 CDS DS362229.1 16897 16304 -1 - 594 Transposase - none -
fig|6666666.230106.peg.480 CDS DS362229.1 18131 16911 -2 - 1221 transposase - none -
fig|6666666.230106.peg.481 CDS DS362229.1 18775 18963 1 + 189 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230106.peg.482 CDS DS362229.1 18972 20090 3 + 1119 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230106.peg.483 CDS DS362229.1 21671 20118 -2 - 1554 FIG00897230: hypothetical protein - none -
fig|6666666.230106.peg.484 CDS DS362229.1 24751 21719 -1 - 3033 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.485 CDS DS362229.1 25114 25560 1 + 447 Transcriptional regulator, ArsR family - none -
fig|6666666.230106.peg.486 CDS DS362229.1 26089 25553 -1 - 537 Spermidine N1-acetyltransferase (EC 2.3.1.57) Polyamine Metabolism
fig|6666666.230106.peg.487 CDS DS362229.1 26558 26103 -2 - 456 FIG01255190: hypothetical protein - none -
fig|6666666.230106.peg.488 CDS DS362229.1 27225 26608 -3 - 618 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.230106.peg.489 CDS DS362230.1 988 119 -1 - 870 Ribulokinase (EC 2.7.1.16) L-Arabinose utilization
fig|6666666.230106.peg.490 CDS DS362230.1 2430 1000 -3 - 1431 Fucose permease - none -
fig|6666666.230106.peg.491 CDS DS362230.1 3679 2456 -1 - 1224 FIG00412973: hypothetical protein - none -
fig|6666666.230106.peg.492 CDS DS362230.1 5481 3694 -3 - 1788 L-fucose isomerase (EC 5.3.1.25) - none -
fig|6666666.230106.peg.493 CDS DS362230.1 6563 5559 -2 - 1005 FIG00417592: hypothetical protein - none -
fig|6666666.230106.peg.494 CDS DS362230.1 6794 7858 2 + 1065 FIG00410851: hypothetical protein - none -
fig|6666666.230106.peg.495 CDS DS362230.1 8179 9126 1 + 948 Ribulokinase (EC 2.7.1.16) L-Arabinose utilization
fig|6666666.230106.peg.496 CDS DS362230.1 9156 10331 3 + 1176 FIG01197961: hypothetical protein - none -
fig|6666666.230106.peg.497 CDS DS362230.1 10434 13358 3 + 2925 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.498 CDS DS362230.1 13377 14951 3 + 1575 RagB/SusD domain protein - none -
fig|6666666.230106.peg.499 CDS DS362231.1 60 839 3 + 780 FIG00412864: hypothetical protein - none -
fig|6666666.230106.peg.500 CDS DS362231.1 2209 836 -1 - 1374 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.230106.peg.501 CDS DS362231.1 2394 3827 3 + 1434 Response regulator of zinc sigma-54-dependent two-component system Zinc resistance
fig|6666666.230106.peg.502 CDS DS362231.1 4297 6018 1 + 1722 Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) Potassium homeostasis
fig|6666666.230106.peg.503 CDS DS362231.1 6049 8097 1 + 2049 Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) Potassium homeostasis
fig|6666666.230106.peg.504 CDS DS362231.1 8110 8682 1 + 573 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) Potassium homeostasis
fig|6666666.230106.peg.505 CDS DS362231.1 8829 9584 3 + 756 FrrB - none -
fig|6666666.230106.peg.506 CDS DS362231.1 9697 10818 1 + 1122 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.230106.peg.507 CDS DS362231.1 10839 12278 3 + 1440 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.230106.peg.508 CDS DS362231.1 13151 12285 -2 - 867 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.509 CDS DS362231.1 14829 13189 -3 - 1641 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.230106.peg.510 CDS DS362231.1 15958 14864 -1 - 1095 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.230106.peg.511 CDS DS362231.1 17369 16035 -2 - 1335 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.230106.peg.512 CDS DS362231.1 17889 18275 3 + 387 FIG00937093: hypothetical protein - none -
fig|6666666.230106.peg.513 CDS DS362231.1 18353 20254 2 + 1902 membrane protein, putative - none -
fig|6666666.230106.peg.514 CDS DS362231.1 20269 21483 1 + 1215 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.230106.peg.515 CDS DS362231.1 21565 22758 1 + 1194 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230106.peg.516 CDS DS362231.1 25510 23549 -1 - 1962 two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.517 CDS DS362231.1 27366 25507 -3 - 1860 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.518 CDS DS362231.1 27311 27430 2 + 120 hypothetical protein - none -
fig|6666666.230106.peg.519 CDS DS362231.1 29335 27521 -1 - 1815 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.230106.peg.520 CDS DS362231.1 29478 29786 3 + 309 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.230106.peg.521 CDS DS362231.1 29783 30127 2 + 345 FIG00408297: hypothetical protein - none -
fig|6666666.230106.peg.522 CDS DS362231.1 31528 30221 -1 - 1308 FIG01093408: hypothetical protein - none -
fig|6666666.230106.peg.523 CDS DS362231.1 33091 31580 -1 - 1512 glycoside hydrolase family 30, candidate beta-glycosidase - none -
fig|6666666.230106.peg.524 CDS DS362231.1 34649 33123 -2 - 1527 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.525 CDS DS362231.1 37583 34668 -2 - 2916 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.526 CDS DS362231.1 38024 39739 2 + 1716 Regulatory protein SusR Cellulosome
fig|6666666.230106.peg.527 CDS DS362231.1 40329 40189 -3 - 141 hypothetical protein - none -
fig|6666666.230106.peg.528 CDS DS362231.1 43271 42675 -2 - 597 Chloramphenicol acetyltransferase (EC 2.3.1.28) - none -
fig|6666666.230106.peg.529 CDS DS362232.1 189 1637 3 + 1449 FIG01093382: hypothetical protein - none -
fig|6666666.230106.peg.530 CDS DS362232.1 1669 2862 1 + 1194 FIG00414347: hypothetical protein - none -
fig|6666666.230106.peg.531 CDS DS362232.1 3042 6128 3 + 3087 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.532 CDS DS362232.1 6145 8067 1 + 1923 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.533 CDS DS362232.1 8118 8966 3 + 849 FIG00414252: hypothetical protein - none -
fig|6666666.230106.peg.534 CDS DS362232.1 9089 11032 2 + 1944 FIG00939684: hypothetical protein - none -
fig|6666666.230106.peg.535 CDS DS362232.1 11127 12200 3 + 1074 carbohydrate-binding protein - none -
fig|6666666.230106.peg.536 CDS DS362232.1 12218 13396 2 + 1179 putative alpha-1,6-mannanase - none -
fig|6666666.230106.peg.537 CDS DS362232.1 13437 13580 3 + 144 Alpha-mannosidase (EC 3.2.1.24) Mannose Metabolism
fig|6666666.230106.peg.538 CDS DS362232.1 13623 17048 3 + 3426 Alpha-mannosidase (EC 3.2.1.24) Mannose Metabolism
fig|6666666.230106.peg.539 CDS DS362232.1 17060 19144 2 + 2085 FIG00411497: hypothetical protein - none -
fig|6666666.230106.peg.540 CDS DS362232.1 19281 21506 3 + 2226 two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.541 CDS DS362232.1 21982 21509 -1 - 474 hypothetical protein - none -
fig|6666666.230106.peg.542 CDS DS362232.1 22100 22852 2 + 753 Transcriptional regulatory protein rprY - none -
fig|6666666.230106.peg.543 CDS DS362232.1 22963 23829 1 + 867 FIG00418058: hypothetical protein - none -
fig|6666666.230106.peg.544 CDS DS362232.1 24120 24545 3 + 426 FIG00411736: hypothetical protein - none -
fig|6666666.230106.peg.545 CDS DS362232.1 25896 24631 -3 - 1266 FIG00413271: hypothetical protein - none -
fig|6666666.230106.peg.546 CDS DS362232.1 26096 26452 2 + 357 FIG00418096: hypothetical protein - none -
fig|6666666.230106.peg.547 CDS DS362232.1 26724 26864 3 + 141 hypothetical protein - none -
fig|6666666.230106.peg.548 CDS DS362232.1 27076 27570 1 + 495 hypothetical protein - none -
fig|6666666.230106.peg.549 CDS DS362232.1 28073 28804 2 + 732 Prohibitin - none -
fig|6666666.230106.peg.550 CDS DS362232.1 29513 32128 2 + 2616 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.230106.peg.551 CDS DS362232.1 36359 32223 -2 - 4137 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.552 CDS DS362232.1 40560 36493 -3 - 4068 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.553 CDS DS362232.1 42670 40721 -1 - 1950 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.554 CDS DS362232.1 43023 46631 3 + 3609 Alpha-mannosidase (EC 3.2.1.24) Mannose Metabolism
fig|6666666.230106.peg.555 CDS DS362232.1 46779 48845 3 + 2067 Putative glycosyl hydrolase of unknown function (DUF1680) - none -
fig|6666666.230106.peg.556 CDS DS362232.1 49071 50300 3 + 1230 putative alpha-1,6-mannanase - none -
fig|6666666.230106.peg.557 CDS DS362232.1 50320 51783 1 + 1464 FIG00937589: hypothetical protein - none -
fig|6666666.230106.peg.558 CDS DS362232.1 51941 55102 2 + 3162 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.559 CDS DS362232.1 55118 56728 2 + 1611 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.560 CDS DS362232.1 56762 57910 2 + 1149 hypothetical protein - none -
fig|6666666.230106.peg.561 CDS DS362232.1 57925 59058 1 + 1134 putative alpha-1,6-mannanase - none -
fig|6666666.230106.peg.562 CDS DS362232.1 59201 61351 2 + 2151 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230106.peg.563 CDS DS362232.1 61367 63994 2 + 2628 alpha-rhamnosidase - none -
fig|6666666.230106.peg.564 CDS DS362232.1 66268 64106 -1 - 2163 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.565 CDS DS362232.1 68654 66318 -2 - 2337 Alpha-xylosidase (EC 3.2.1.-) Xylose utilization
fig|6666666.230106.peg.566 CDS DS362232.1 69661 68756 -1 - 906 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.230106.peg.567 CDS DS362232.1 70668 69748 -3 - 921 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.230106.peg.568 CDS DS362232.1 71495 70683 -2 - 813 FIG00403719: hypothetical protein - none -
fig|6666666.230106.peg.569 CDS DS362232.1 72673 71570 -1 - 1104 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.230106.peg.570 CDS DS362233.1 136 447 1 + 312 probably aromatic ring hydroxylating enzyme, evidenced by COGnitor; PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.230106.peg.571 CDS DS362233.1 487 1251 1 + 765 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) Llipid A biosynthesis cluster
fig|6666666.230106.peg.572 CDS DS362233.1 1293 3149 3 + 1857 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.230106.peg.573 CDS DS362233.1 3249 3461 3 + 213 FIG00410184: hypothetical protein - none -
fig|6666666.230106.peg.574 CDS DS362233.1 4968 3568 -3 - 1401 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.230106.peg.575 CDS DS362233.1 6288 5149 -3 - 1140 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.230106.peg.576 CDS DS362233.1 7386 6367 -3 - 1020 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.230106.peg.577 CDS DS362233.1 7692 7573 -3 - 120 hypothetical protein - none -
fig|6666666.230106.peg.578 CDS DS362233.1 7709 8047 2 + 339 Antiholin-like protein LrgA Murein hydrolase regulation and cell death
fig|6666666.230106.peg.579 CDS DS362233.1 8044 8739 1 + 696 LrgA-associated membrane protein LrgB Murein hydrolase regulation and cell death
fig|6666666.230106.peg.580 CDS DS362233.1 8792 9706 2 + 915 FIG00406100: hypothetical protein - none -
fig|6666666.230106.peg.581 CDS DS362233.1 9749 10765 2 + 1017 PhnO protein - none -
fig|6666666.230106.peg.582 CDS DS362233.1 12087 10768 -3 - 1320 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.230106.peg.583 CDS DS362233.1 13648 12110 -1 - 1539 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.230106.peg.584 CDS DS362233.1 14492 13728 -2 - 765 Diadenylate cyclase spyDAC; Bacterial checkpoint controller DisA with nucleotide-binding domain Bacterial checkpoint-control-related cluster;
Bacterial checkpoint-control-related cluster
fig|6666666.230106.peg.585 CDS DS362233.1 15370 14519 -1 - 852 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.230106.peg.586 CDS DS362233.1 15555 16853 3 + 1299 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.230106.peg.587 CDS DS362233.1 17239 16856 -1 - 384 FIG00405104: hypothetical protein - none -
fig|6666666.230106.peg.588 CDS DS362233.1 17343 18710 3 + 1368 Putative sodium-dependent transporter - none -
fig|6666666.230106.peg.589 CDS DS362233.1 18717 19667 3 + 951 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.590 CDS DS362233.1 19804 22116 1 + 2313 FIG00404599: hypothetical protein - none -
fig|6666666.230106.peg.591 CDS DS362233.1 22778 22119 -2 - 660 Lipoprotein releasing system ATP-binding protein LolD Lipoprotein sorting system
fig|6666666.230106.peg.592 CDS DS362233.1 23553 22843 -3 - 711 Molybdopterin biosynthesis protein MoeB - none -
fig|6666666.230106.peg.593 CDS DS362233.1 25684 23555 -1 - 2130 Na+/H+ antiporter - none -
fig|6666666.230106.peg.594 CDS DS362233.1 25839 26846 3 + 1008 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.230106.peg.595 CDS DS362233.1 28465 27047 -1 - 1419 putative pyrogenic exotoxin B - none -
fig|6666666.230106.peg.596 CDS DS362233.1 30423 28609 -3 - 1815 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.597 CDS DS362233.1 33754 30431 -1 - 3324 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.598 CDS DS362233.1 34038 34187 3 + 150 hypothetical protein - none -
fig|6666666.230106.peg.599 CDS DS362233.1 34844 34167 -2 - 678 hypothetical protein - none -
fig|6666666.230106.peg.600 CDS DS362233.1 35419 38814 1 + 3396 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.601 CDS DS362233.1 38837 40522 2 + 1686 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.602 CDS DS362233.1 40707 40576 -3 - 132 hypothetical protein - none -
fig|6666666.230106.peg.603 CDS DS362233.1 40731 42284 3 + 1554 hypothetical protein - none -
fig|6666666.230106.peg.604 CDS DS362233.1 42375 42647 3 + 273 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.230106.peg.605 CDS DS362233.1 42651 42959 3 + 309 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.230106.peg.606 CDS DS362233.1 43731 43108 -3 - 624 putative DNA-binding protein - none -
fig|6666666.230106.peg.607 CDS DS362233.1 44103 46196 3 + 2094 putative helicase - none -
fig|6666666.230106.peg.608 CDS DS362233.1 46427 47593 2 + 1167 alternate gene name: yzbB - none -
fig|6666666.230106.peg.609 CDS DS362233.1 47752 49206 1 + 1455 sodium/iodide co-transporter - none -
fig|6666666.230106.peg.610 CDS DS362233.1 49222 52332 1 + 3111 Xanthan lyase - none -
fig|6666666.230106.peg.611 CDS DS362233.1 52382 54211 2 + 1830 Serine/threonine protein kinase related protein - none -
fig|6666666.230106.peg.612 CDS DS362233.1 54236 55696 2 + 1461 Putative glycosyltransferase - none -
fig|6666666.230106.peg.613 CDS DS362233.1 55698 56630 3 + 933 putative glycosyltransferase - possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide Rhamnose containing glycans
fig|6666666.230106.peg.614 CDS DS362233.1 56672 57991 2 + 1320 Amidase enhancer - none -
fig|6666666.230106.peg.615 CDS DS362233.1 58019 59341 2 + 1323 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.230106.peg.616 CDS DS362233.1 59441 60631 2 + 1191 alternate gene name: yzbB - none -
fig|6666666.230106.peg.617 CDS DS362233.1 60809 63769 2 + 2961 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing - none -
fig|6666666.230106.peg.618 CDS DS362233.1 63803 64987 2 + 1185 N-acetylglucosamine related transporter, NagX - none -
fig|6666666.230106.peg.619 CDS DS362233.1 65117 65956 2 + 840 FIG00404118: hypothetical protein - none -
fig|6666666.230106.peg.620 CDS DS362233.1 66003 66812 3 + 810 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.230106.peg.621 CDS DS362233.1 66841 68736 1 + 1896 Beta-lactamase (Cephalosporinase) (EC 3.5.2.6) Beta-lactamase
fig|6666666.230106.peg.622 CDS DS362233.1 69525 68881 -3 - 645 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.230106.peg.623 CDS DS362233.1 71135 69594 -2 - 1542 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.230106.peg.624 CDS DS362233.1 73710 71374 -3 - 2337 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.625 CDS DS362233.1 74920 73724 -1 - 1197 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230106.peg.626 CDS DS362233.1 76497 74956 -3 - 1542 hypothetical protein-signal peptide and transmembrane prediction - none -
fig|6666666.230106.peg.627 CDS DS362233.1 76833 76519 -3 - 315 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.628 CDS DS362234.1 1445 66 -2 - 1380 Xyloside transporter XynT Xylose utilization
fig|6666666.230106.peg.629 CDS DS362234.1 2635 1463 -1 - 1173 COG2152 predicted glycoside hydrolase - none -
fig|6666666.230106.peg.630 CDS DS362234.1 3608 2658 -2 - 951 Mannan endo-1,4-beta-mannosidase - none -
fig|6666666.230106.peg.631 CDS DS362234.1 3597 3854 3 + 258 hypothetical protein - none -
fig|6666666.230106.peg.632 CDS DS362234.1 5373 3904 -3 - 1470 FIG00899022: hypothetical protein - none -
fig|6666666.230106.peg.633 CDS DS362234.1 7141 5375 -1 - 1767 FIG00897120: hypothetical protein - none -
fig|6666666.230106.peg.634 CDS DS362234.1 8667 7192 -3 - 1476 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.230106.peg.635 CDS DS362234.1 10122 8671 -3 - 1452 FIG00897658: hypothetical protein - none -
fig|6666666.230106.peg.636 CDS DS362234.1 10708 10094 -1 - 615 FIG00896332: hypothetical protein - none -
fig|6666666.230106.peg.637 CDS DS362234.1 11945 10788 -2 - 1158 RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein - none -
fig|6666666.230106.peg.638 CDS DS362234.1 13504 12176 -1 - 1329 putative helicase - none -
fig|6666666.230106.peg.639 CDS DS362234.1 13837 14505 1 + 669 putative DNA-binding protein - none -
fig|6666666.230106.peg.640 CDS DS362234.1 14548 14661 1 + 114 hypothetical protein - none -
fig|6666666.230106.peg.641 CDS DS362234.1 15549 14827 -3 - 723 hypothetical protein - none -
fig|6666666.230106.peg.642 CDS DS362234.1 16516 15620 -1 - 897 FIG00416167: hypothetical protein - none -
fig|6666666.230106.peg.643 CDS DS362234.1 18273 16504 -3 - 1770 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.644 CDS DS362234.1 21534 18286 -3 - 3249 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.645 CDS DS362234.1 23637 21940 -3 - 1698 Mannan endo-1,4-beta-mannosidase B precursor (EC 3.2.1.78) - none -
fig|6666666.230106.peg.646 CDS DS362234.1 25690 23705 -1 - 1986 FIG00410329: hypothetical protein - none -
fig|6666666.230106.peg.647 CDS DS362234.1 27025 25712 -1 - 1314 FIG00417257: hypothetical protein - none -
fig|6666666.230106.peg.648 CDS DS362234.1 28751 27030 -2 - 1722 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.649 CDS DS362234.1 32038 28772 -1 - 3267 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.650 CDS DS362234.1 33223 32264 -1 - 960 Endoglucanase 5A (EC 3.2.1.4) (Endo-1,4-beta-glucanase 5A) (Alkaline cellulase) - none -
fig|6666666.230106.peg.651 CDS DS362234.1 34649 33357 -2 - 1293 Endo-1,4-beta-mannosidase Mannose Metabolism
fig|6666666.230106.peg.652 CDS DS362234.1 36024 34741 -3 - 1284 FIG00937556: hypothetical protein - none -
fig|6666666.230106.peg.653 CDS DS362234.1 36990 36097 -3 - 894 Transcriptional regulator of various polyols utilization, AraC family - none -
fig|6666666.230106.peg.654 CDS DS362234.1 39733 37289 -1 - 2445 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.655 CDS DS362234.1 39787 39921 1 + 135 hypothetical protein - none -
fig|6666666.230106.peg.656 CDS DS362234.1 39956 42442 2 + 2487 Cellobiose phosphorylase (EC 2.4.1.-) - none -
fig|6666666.230106.peg.657 CDS DS362234.1 42461 43465 2 + 1005 Putative ion-channel protein - none -
fig|6666666.230106.peg.658 CDS DS362234.1 43472 45487 2 + 2016 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.659 CDS DS362234.1 45679 46317 1 + 639 FIG00404238: hypothetical protein - none -
fig|6666666.230106.peg.660 CDS DS362234.1 46441 46614 1 + 174 FIG00404706: hypothetical protein - none -
fig|6666666.230106.peg.661 CDS DS362234.1 46611 47069 3 + 459 FIG00404706: hypothetical protein - none -
fig|6666666.230106.peg.662 CDS DS362234.1 50221 47177 -1 - 3045 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230106.peg.663 CDS DS362234.1 53256 50242 -3 - 3015 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230106.peg.664 CDS DS362234.1 54175 53258 -1 - 918 5@1-nucleotidase (EC 3.1.3.5) Purine conversions
fig|6666666.230106.peg.665 CDS DS362234.1 54974 54198 -2 - 777 5@1-nucleotidase (EC 3.1.3.5) Purine conversions
fig|6666666.230106.peg.666 CDS DS362234.1 55228 55581 1 + 354 LSU ribosomal protein L19p - none -
fig|6666666.230106.peg.667 CDS DS362234.1 55864 55977 1 + 114 hypothetical protein - none -
fig|6666666.230106.peg.668 CDS DS362234.1 57307 56339 -1 - 969 Glucokinase (EC 2.7.1.2) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.230106.peg.669 CDS DS362234.1 57496 58212 1 + 717 ABC transporter ATP-binding protein YvcR - none -
fig|6666666.230106.peg.670 CDS DS362234.1 58267 59526 1 + 1260 ABC transporter permease protein - none -
fig|6666666.230106.peg.671 CDS DS362234.1 59532 60773 3 + 1242 ABC transporter permease protein - none -
fig|6666666.230106.peg.672 CDS DS362234.1 60852 61955 3 + 1104 Membrane fusion efflux protein - none -
fig|6666666.230106.peg.673 CDS DS362234.1 61986 63314 3 + 1329 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.674 CDS DS362234.1 64316 63399 -2 - 918 FIG00410951: hypothetical protein - none -
fig|6666666.230106.peg.675 CDS DS362234.1 64600 64331 -1 - 270 hypothetical protein - none -
fig|6666666.230106.peg.676 CDS DS362234.1 64827 64651 -3 - 177 hypothetical protein - none -
fig|6666666.230106.peg.677 CDS DS362234.1 65960 65124 -2 - 837 FIG00938655: hypothetical protein - none -
fig|6666666.230106.peg.678 CDS DS362234.1 66154 67155 1 + 1002 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.230106.peg.679 CDS DS362234.1 67300 67178 -1 - 123 hypothetical protein - none -
fig|6666666.230106.peg.680 CDS DS362234.1 68139 67495 -3 - 645 Transcriptional regulator of rhamnose utilization, AraC family - none -
fig|6666666.230106.peg.681 CDS DS362234.1 69687 68533 -3 - 1155 Lactaldehyde reductase (EC 1.1.1.77) - none -
fig|6666666.230106.peg.682 CDS DS362234.1 70522 69713 -1 - 810 Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) - none -
fig|6666666.230106.peg.683 CDS DS362234.1 71559 70570 -3 - 990 L-rhamnose-proton symporter - none -
fig|6666666.230106.peg.684 CDS DS362234.1 72856 71603 -1 - 1254 L-rhamnose isomerase (EC 5.3.1.14) - none -
fig|6666666.230106.peg.685 CDS DS362234.1 74370 72898 -3 - 1473 Rhamnulokinase (EC 2.7.1.5) - none -
fig|6666666.230106.peg.686 CDS DS362234.1 74628 74482 -3 - 147 hypothetical protein - none -
fig|6666666.230106.peg.687 CDS DS362234.1 74685 75158 3 + 474 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine and Ornithine Degradation
fig|6666666.230106.peg.688 CDS DS362234.1 75219 75752 3 + 534 FIG00651573: hypothetical protein - none -
fig|6666666.230106.peg.689 CDS DS362234.1 75766 76971 1 + 1206 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230106.peg.690 CDS DS362234.1 77183 78151 2 + 969 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230106.peg.691 CDS DS362234.1 78157 79278 1 + 1122 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230106.peg.692 CDS DS362234.1 79408 80181 1 + 774 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.230106.peg.693 CDS DS362234.1 80303 80857 2 + 555 Transcriptional regulator - none -
fig|6666666.230106.peg.694 CDS DS362234.1 80865 82520 3 + 1656 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases - none -
fig|6666666.230106.peg.695 CDS DS362234.1 82740 83990 3 + 1251 FIG00414882: hypothetical protein - none -
fig|6666666.230106.peg.696 CDS DS362234.1 85959 84619 -3 - 1341 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230106.peg.697 CDS DS362234.1 86398 85988 -1 - 411 FIG00938009: hypothetical protein - none -
fig|6666666.230106.peg.698 CDS DS362234.1 87130 86492 -1 - 639 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.230106.peg.699 CDS DS362234.1 87692 87213 -2 - 480 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.230106.peg.700 CDS DS362234.1 88525 87689 -1 - 837 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.230106.peg.701 CDS DS362234.1 88600 89655 1 + 1056 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.230106.peg.702 CDS DS362234.1 89790 91154 3 + 1365 FIG00936986: hypothetical protein - none -
fig|6666666.230106.peg.703 CDS DS362234.1 91157 91894 2 + 738 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.230106.peg.704 CDS DS362234.1 91947 94586 3 + 2640 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.230106.peg.705 CDS DS362234.1 94628 95143 2 + 516 Outer membrane protein H precursor Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.230106.peg.706 CDS DS362234.1 95377 95778 1 + 402 Outer membrane protein H precursor Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.230106.peg.707 CDS DS362234.1 95888 96727 2 + 840 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.230106.peg.708 CDS DS362234.1 96803 97042 2 + 240 FIG00405789: hypothetical protein - none -
fig|6666666.230106.peg.709 CDS DS362234.1 97032 98111 3 + 1080 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.230106.peg.710 CDS DS362234.1 98178 99425 3 + 1248 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.230106.peg.711 CDS DS362234.1 99470 100423 2 + 954 N-acetylornithine carbamoyltransferase (EC 2.1.3.9) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230106.peg.712 CDS DS362234.1 100951 100565 -1 - 387 FIG00403504: hypothetical protein - none -
fig|6666666.230106.peg.713 CDS DS362234.1 101633 100965 -2 - 669 FIG00402748: hypothetical protein - none -
fig|6666666.230106.peg.714 CDS DS362234.1 102795 101638 -3 - 1158 FIG00938859: hypothetical protein - none -
fig|6666666.230106.peg.715 CDS DS362234.1 103788 102808 -3 - 981 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.230106.peg.716 CDS DS362234.1 104855 103785 -2 - 1071 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.230106.peg.717 CDS DS362234.1 105556 104909 -1 - 648 FIG00938099: hypothetical protein - none -
fig|6666666.230106.peg.718 CDS DS362234.1 105975 105727 -3 - 249 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.230106.peg.719 CDS DS362234.1 106083 106649 3 + 567 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.230106.peg.720 CDS DS362234.1 106795 107784 1 + 990 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230106.peg.721 CDS DS362234.1 107816 108502 2 + 687 DNA repair protein RadC Bacterial cell division cluster;
DNA repair, bacterial
fig|6666666.230106.peg.722 CDS DS362235.1 66 1604 3 + 1539 Maltodextrin glucosidase (EC 3.2.1.20) Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.723 CDS DS362235.1 1611 3044 3 + 1434 FIG00413844: hypothetical protein - none -
fig|6666666.230106.peg.724 CDS DS362235.1 3984 3115 -3 - 870 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.230106.peg.725 CDS DS362235.1 4542 7379 3 + 2838 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.230106.peg.726 CDS DS362235.1 7385 8287 2 + 903 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.230106.peg.727 CDS DS362235.1 8325 8903 3 + 579 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.230106.peg.728 CDS DS362235.1 9935 8997 -2 - 939 Quinolinate synthetase (EC 2.5.1.72) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.230106.peg.729 CDS DS362235.1 10400 10927 2 + 528 23S rRNA methyltransferase (EC 2.1.1.-) - none -
fig|6666666.230106.peg.730 CDS DS362235.1 11251 12213 1 + 963 Protein of unknown function DUF161 - none -
fig|6666666.230106.peg.731 CDS DS362235.1 12370 13083 1 + 714 FIG00413590: hypothetical protein - none -
fig|6666666.230106.peg.732 CDS DS362235.1 13659 13078 -3 - 582 FIG00896812: hypothetical protein - none -
fig|6666666.230106.peg.733 CDS DS362235.1 13859 15853 2 + 1995 FIG00898434: hypothetical protein - none -
fig|6666666.230106.peg.734 CDS DS362235.1 15992 16765 2 + 774 Fe-S OXIDOREDUCTASE (1.8.-.-) - none -
fig|6666666.230106.peg.735 CDS DS362235.1 16776 17285 3 + 510 FIG00403759: hypothetical protein - none -
fig|6666666.230106.peg.736 CDS DS362235.1 18130 17291 -1 - 840 DNA/RNA endonuclease G - none -
fig|6666666.230106.peg.737 CDS DS362235.1 19754 18138 -2 - 1617 Sulfate permease Cysteine Biosynthesis
fig|6666666.230106.peg.738 CDS DS362235.1 20142 20720 3 + 579 Rubrerythrin Oxidative stress;
Rubrerythrin
fig|6666666.230106.peg.739 CDS DS362235.1 20877 21017 3 + 141 hypothetical protein - none -
fig|6666666.230106.peg.740 CDS DS362235.1 23197 21014 -1 - 2184 FIG00412200: hypothetical protein - none -
fig|6666666.230106.peg.741 CDS DS362235.1 24976 23228 -1 - 1749 FIG00412221: hypothetical protein - none -
fig|6666666.230106.peg.742 CDS DS362235.1 26566 24995 -1 - 1572 L-aspartate oxidase (EC 1.4.3.16) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.230106.peg.743 CDS DS362235.1 28592 26643 -2 - 1950 FIG00409736: hypothetical protein - none -
fig|6666666.230106.peg.744 CDS DS362235.1 28783 29157 1 + 375 FIG00406980: hypothetical protein - none -
fig|6666666.230106.peg.745 CDS DS362235.1 29191 29583 1 + 393 FIG00413241: hypothetical protein - none -
fig|6666666.230106.peg.746 CDS DS362235.1 29730 29617 -3 - 114 hypothetical protein - none -
fig|6666666.230106.peg.747 CDS DS362235.1 29809 30555 1 + 747 Two-component system response regulator - none -
fig|6666666.230106.peg.748 CDS DS362235.1 31920 30709 -3 - 1212 putative outer membrane protein - none -
fig|6666666.230106.peg.749 CDS DS362235.1 33233 31917 -2 - 1317 FIG00407157: hypothetical protein - none -
fig|6666666.230106.peg.750 CDS DS362235.1 33476 34555 2 + 1080 FIG00410465: hypothetical protein - none -
fig|6666666.230106.peg.751 CDS DS362235.1 34581 34913 3 + 333 hypothetical protein - none -
fig|6666666.230106.peg.752 CDS DS362235.1 35182 34910 -1 - 273 FIG00403751: hypothetical protein - none -
fig|6666666.230106.peg.753 CDS DS362235.1 35856 35185 -3 - 672 FIG00403751: hypothetical protein - none -
fig|6666666.230106.peg.754 CDS DS362235.1 36045 37403 3 + 1359 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.230106.peg.755 CDS DS362235.1 37438 37860 1 + 423 hypothetical protein - none -
fig|6666666.230106.peg.756 CDS DS362235.1 39140 37869 -2 - 1272 peptidase M1, membrane alanine aminopeptidase - none -
fig|6666666.230106.peg.757 CDS DS362235.1 39267 40757 3 + 1491 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.230106.peg.758 CDS DS362235.1 41766 40855 -3 - 912 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.759 CDS DS362235.1 41926 43095 1 + 1170 Multidrug resistance protein - none -
fig|6666666.230106.peg.760 CDS DS362235.1 43133 46312 2 + 3180 RND efflux system, inner membrane transporter CmeB Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.761 CDS DS362235.1 46342 47748 1 + 1407 Outer membrane protein oprM - none -
fig|6666666.230106.peg.762 CDS DS362235.1 49676 48180 -2 - 1497 Acetyl-CoA hydrolase (EC 3.1.2.1) - none -
fig|6666666.230106.peg.763 CDS DS362235.1 50130 49750 -3 - 381 FIG00402837: hypothetical protein - none -
fig|6666666.230106.peg.764 CDS DS362235.1 50525 51898 2 + 1374 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.230106.peg.765 CDS DS362235.1 52504 52001 -1 - 504 FIG00410772: hypothetical protein - none -
fig|6666666.230106.peg.766 CDS DS362235.1 52877 53776 2 + 900 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) - none -
fig|6666666.230106.peg.767 CDS DS362235.1 53859 54734 3 + 876 Cell division protein FtsX Bacterial Cell Division
fig|6666666.230106.peg.768 CDS DS362235.1 54818 55057 2 + 240 FIG00936924: hypothetical protein - none -
fig|6666666.230106.peg.769 CDS DS362235.1 55214 56005 2 + 792 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.230106.peg.770 CDS DS362235.1 56121 56828 3 + 708 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
CBSS-350688.3.peg.1509;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.230106.peg.771 CDS DS362235.1 56952 58010 3 + 1059 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230106.peg.772 CDS DS362235.1 58013 58489 2 + 477 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.230106.peg.773 CDS DS362235.1 58791 60083 3 + 1293 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230106.peg.774 CDS DS362235.1 62059 60188 -1 - 1872 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.775 CDS DS362235.1 63012 62290 -3 - 723 FIG00409286: hypothetical protein - none -
fig|6666666.230106.peg.776 CDS DS362235.1 63193 63336 1 + 144 hypothetical protein - none -
fig|6666666.230106.peg.777 CDS DS362235.1 63444 63752 3 + 309 hypothetical protein - none -
fig|6666666.230106.peg.778 CDS DS362235.1 63800 64663 2 + 864 FIG00403097: hypothetical protein - none -
fig|6666666.230106.peg.779 CDS DS362235.1 64687 64809 1 + 123 hypothetical protein - none -
fig|6666666.230106.peg.780 CDS DS362235.1 64849 65337 1 + 489 Putative non-specific DNA-binding protein - none -
fig|6666666.230106.peg.781 CDS DS362235.1 65318 65443 2 + 126 hypothetical protein - none -
fig|6666666.230106.peg.782 CDS DS362235.1 65496 65936 3 + 441 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230106.peg.783 CDS DS362235.1 66172 69432 1 + 3261 hypothetical protein - none -
fig|6666666.230106.peg.784 CDS DS362235.1 69447 72428 3 + 2982 Mobile element protein - none -
fig|6666666.230106.peg.785 CDS DS362235.1 73122 74462 3 + 1341 Mobile element protein - none -
fig|6666666.230106.peg.786 CDS DS362235.1 75246 74914 -3 - 333 hypothetical protein - none -
fig|6666666.230106.peg.787 CDS DS362235.1 75148 77646 1 + 2499 Mobile element protein - none -
fig|6666666.230106.peg.788 CDS DS362235.1 78153 78290 3 + 138 Mobile element protein - none -
fig|6666666.230106.peg.789 CDS DS362236.1 907 371 -1 - 537 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230106.peg.790 CDS DS362236.1 2559 1450 -3 - 1110 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.791 CDS DS362236.1 2962 2636 -1 - 327 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.230106.peg.792 CDS DS362236.1 4368 3178 -3 - 1191 [FeFe]-hydrogenase maturation GTPase HydF - none -
fig|6666666.230106.peg.793 CDS DS362236.1 5798 4380 -2 - 1419 2-iminoacetate synthase (ThiH) (EC 4.1.99.19) - none -
fig|6666666.230106.peg.794 CDS DS362236.1 6909 5851 -3 - 1059 [FeFe]-hydrogenase maturation protein HydE - none -
fig|6666666.230106.peg.795 CDS DS362236.1 8386 6926 -1 - 1461 Periplasmic [Fe] hydrogenase (EC 1.12.7.2) - none -
fig|6666666.230106.peg.796 CDS DS362236.1 8494 8991 1 + 498 GCN5-related N-acetyltransferase - none -
fig|6666666.230106.peg.797 CDS DS362236.1 10601 9081 -2 - 1521 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.230106.peg.798 CDS DS362236.1 11198 10719 -2 - 480 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.230106.peg.799 CDS DS362236.1 14055 11224 -3 - 2832 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.230106.peg.800 CDS DS362236.1 14245 16035 1 + 1791 LysM-repeat proteins and domains - none -
fig|6666666.230106.peg.801 CDS DS362236.1 16116 16817 3 + 702 FIG00897535: hypothetical protein - none -
fig|6666666.230106.peg.802 CDS DS362236.1 17448 16987 -3 - 462 FIG00897728: hypothetical protein - none -
fig|6666666.230106.peg.803 CDS DS362236.1 17783 17448 -2 - 336 FIG00936941: hypothetical protein - none -
fig|6666666.230106.peg.804 CDS DS362236.1 18626 17808 -2 - 819 lipoprotein protein, putative - none -
fig|6666666.230106.peg.805 CDS DS362236.1 19241 18816 -2 - 426 Amino acid-binding ACT Aromatic amino acid interconversions with aryl acids
fig|6666666.230106.peg.806 CDS DS362236.1 20565 19294 -3 - 1272 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) Aromatic amino acid interconversions with aryl acids
fig|6666666.230106.peg.807 CDS DS362236.1 20709 22769 3 + 2061 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.230106.peg.808 CDS DS362236.1 22857 23912 3 + 1056 Choloylglycine hydrolase (EC 3.5.1.24) Bile hydrolysis
fig|6666666.230106.peg.809 CDS DS362236.1 24045 27344 3 + 3300 Helicase - none -
fig|6666666.230106.peg.810 CDS DS362236.1 27388 30279 1 + 2892 FIG00403299: hypothetical protein - none -
fig|6666666.230106.peg.811 CDS DS362236.1 31528 30401 -1 - 1128 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.812 CDS DS362236.1 32505 31570 -3 - 936 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230106.peg.813 CDS DS362236.1 33204 32671 -3 - 534 Co-activator of prophage gene expression IbrB IbrA and IbrB: co-activators of prophage gene expression
fig|6666666.230106.peg.814 CDS DS362236.1 34490 33201 -2 - 1290 Co-activator of prophage gene expression IbrA IbrA and IbrB: co-activators of prophage gene expression
fig|6666666.230106.peg.815 CDS DS362236.1 34888 34493 -1 - 396 FIG00406930: hypothetical protein - none -
fig|6666666.230106.peg.816 CDS DS362236.1 35081 35632 2 + 552 Chromate transport protein - none -
fig|6666666.230106.peg.817 CDS DS362236.1 35671 36153 1 + 483 Chromate transport protein - none -
fig|6666666.230106.peg.818 CDS DS362236.1 37362 36145 -3 - 1218 Fucose permease - none -
fig|6666666.230106.peg.819 CDS DS362236.1 37366 37512 1 + 147 hypothetical protein - none -
fig|6666666.230106.peg.820 CDS DS362236.1 37516 38400 1 + 885 transcriptional regulator - none -
fig|6666666.230106.peg.821 CDS DS362236.1 38495 38914 2 + 420 FIG00407325: hypothetical protein - none -
fig|6666666.230106.peg.822 CDS DS362236.1 40060 38891 -1 - 1170 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230106.peg.823 CDS DS362236.1 41497 40064 -1 - 1434 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.824 CDS DS362236.1 42383 41517 -2 - 867 FIG00898920: hypothetical protein - none -
fig|6666666.230106.peg.825 CDS DS362236.1 42969 42406 -3 - 564 Maltose O-acetyltransferase (EC 2.3.1.79) Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.826 CDS DS362236.1 43617 42991 -3 - 627 Flavodoxin Flavodoxin
fig|6666666.230106.peg.827 CDS DS362236.1 44526 43711 -3 - 816 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) - none -
fig|6666666.230106.peg.828 CDS DS362236.1 45533 44538 -2 - 996 Flavoredoxin - none -
fig|6666666.230106.peg.829 CDS DS362236.1 46242 46571 3 + 330 hypothetical protein - none -
fig|6666666.230106.peg.830 CDS DS362236.1 46549 48633 1 + 2085 Toprim domain protein CBSS-315749.4.peg.3658
fig|6666666.230106.peg.831 CDS DS362236.1 48630 49010 3 + 381 hypothetical protein - none -
fig|6666666.230106.peg.832 CDS DS362236.1 49144 50505 1 + 1362 hypothetical protein - none -
fig|6666666.230106.peg.833 CDS DS362236.1 50489 51574 2 + 1086 hypothetical protein - none -
fig|6666666.230106.peg.834 CDS DS362236.1 53836 51779 -1 - 2058 hypothetical protein - none -
fig|6666666.230106.peg.835 CDS DS362236.1 53848 53979 1 + 132 hypothetical protein - none -
fig|6666666.230106.peg.836 CDS DS362236.1 54376 54110 -1 - 267 hypothetical protein - none -
fig|6666666.230106.peg.837 CDS DS362236.1 54570 54848 3 + 279 hypothetical protein - none -
fig|6666666.230106.peg.838 CDS DS362236.1 56732 54963 -2 - 1770 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.230106.peg.839 CDS DS362236.1 58810 56735 -1 - 2076 FIG131328: Predicted ATP-dependent endonuclease of the OLD family - none -
fig|6666666.230106.peg.840 CDS DS362236.1 64926 58984 -3 - 5943 putative DNA methylase - none -
fig|6666666.230106.peg.841 CDS DS362236.1 65434 64913 -1 - 522 hypothetical protein - none -
fig|6666666.230106.peg.842 CDS DS362236.1 67515 65434 -3 - 2082 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.230106.peg.843 CDS DS362236.1 69024 67543 -3 - 1482 hypothetical protein - none -
fig|6666666.230106.peg.844 CDS DS362236.1 69257 71113 2 + 1857 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.845 CDS DS362236.1 71569 72759 1 + 1191 hypothetical protein - none -
fig|6666666.230106.peg.846 CDS DS362236.1 72833 73759 2 + 927 hypothetical protein - none -
fig|6666666.230106.peg.847 CDS DS362236.1 73817 74728 2 + 912 hypothetical protein - none -
fig|6666666.230106.peg.848 CDS DS362236.1 74759 74914 2 + 156 hypothetical protein - none -
fig|6666666.230106.peg.849 CDS DS362236.1 74899 75933 1 + 1035 hypothetical protein - none -
fig|6666666.230106.peg.850 CDS DS362236.1 76101 76556 3 + 456 putative non-specific DNA-binding protein - none -
fig|6666666.230106.peg.851 CDS DS362236.1 76728 78629 3 + 1902 Large exoproteins involved in heme utilization or adhesion CBSS-316057.3.peg.3521
fig|6666666.230106.peg.852 CDS DS362236.1 78641 80194 2 + 1554 FIG00414938: hypothetical protein - none -
fig|6666666.230106.peg.853 CDS DS362236.1 80318 80638 2 + 321 hypothetical protein - none -
fig|6666666.230106.peg.854 CDS DS362236.1 80619 80744 3 + 126 hypothetical protein - none -
fig|6666666.230106.peg.855 CDS DS362236.1 80815 82197 1 + 1383 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) Group II intron-associated genes
fig|6666666.230106.peg.856 CDS DS362236.1 82194 82652 3 + 459 hypothetical protein - none -
fig|6666666.230106.peg.857 CDS DS362236.1 82676 83533 2 + 858 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.858 CDS DS362236.1 83635 84237 1 + 603 tetracycline resistance element mobilization regulatory protein RteC - none -
fig|6666666.230106.peg.859 CDS DS362236.1 86285 84270 -2 - 2016 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.860 CDS DS362236.1 87584 86328 -2 - 1257 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.861 CDS DS362236.1 88000 87569 -1 - 432 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.862 CDS DS362236.1 88246 88383 1 + 138 hypothetical protein - none -
fig|6666666.230106.peg.863 CDS DS362236.1 89307 88645 -3 - 663 hypothetical protein - none -
fig|6666666.230106.peg.864 CDS DS362237.1 129 611 3 + 483 Mobile element protein - none -
fig|6666666.230106.peg.865 CDS DS362237.1 828 706 -3 - 123 integrase - none -
fig|6666666.230106.peg.866 CDS DS362237.1 1881 1174 -3 - 708 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.230106.peg.867 CDS DS362237.1 2053 4533 1 + 2481 ATP-dependent protease La (EC 3.4.21.53) Type I Proteolysis in bacteria, ATP-dependent
fig|6666666.230106.peg.868 CDS DS362237.1 4530 5660 3 + 1131 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230106.peg.869 CDS DS362237.1 5657 6793 2 + 1137 membrane protein, putative - none -
fig|6666666.230106.peg.870 CDS DS362237.1 7567 7067 -1 - 501 FIG00402940: hypothetical protein - none -
fig|6666666.230106.peg.871 CDS DS362237.1 7844 9070 2 + 1227 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.230106.peg.872 CDS DS362237.1 9128 10414 2 + 1287 ATP-dependent RNA helicase - none -
fig|6666666.230106.peg.873 CDS DS362237.1 11251 10451 -1 - 801 FIG00406495: hypothetical protein - none -
fig|6666666.230106.peg.874 CDS DS362237.1 12602 11289 -2 - 1314 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.230106.peg.875 CDS DS362237.1 13154 12606 -2 - 549 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Capsular heptose biosynthesis;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230106.peg.876 CDS DS362237.1 14577 13159 -3 - 1419 FIG00403031: hypothetical protein - none -
fig|6666666.230106.peg.877 CDS DS362237.1 14811 15965 3 + 1155 FIG00403302: hypothetical protein - none -
fig|6666666.230106.peg.878 CDS DS362237.1 16016 16549 2 + 534 FHA domain protein - none -
fig|6666666.230106.peg.879 CDS DS362237.1 18106 16658 -1 - 1449 Altronate oxidoreductase (EC 1.1.1.58) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230106.peg.880 CDS DS362237.1 19195 18134 -1 - 1062 hypothetical protein - none -
fig|6666666.230106.peg.881 CDS DS362237.1 19429 20835 1 + 1407 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230106.peg.882 CDS DS362237.1 21567 20878 -3 - 690 Hydrolase, haloacid delahogenase-like family - none -
fig|6666666.230106.peg.883 CDS DS362237.1 21775 23157 1 + 1383 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.230106.peg.884 CDS DS362237.1 23240 24043 2 + 804 metallo-beta-lactamase family protein - none -
fig|6666666.230106.peg.885 CDS DS362237.1 24425 24541 2 + 117 hypothetical protein - none -
fig|6666666.230106.peg.886 CDS DS362237.1 24534 25091 3 + 558 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.230106.peg.887 CDS DS362237.1 25209 25075 -3 - 135 hypothetical protein - none -
fig|6666666.230106.peg.888 CDS DS362237.1 25198 27486 1 + 2289 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) / Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis;
Trehalose Biosynthesis
fig|6666666.230106.peg.889 CDS DS362237.1 27492 29282 3 + 1791 Glucoamylase (EC 3.2.1.3) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.230106.peg.890 CDS DS362237.1 29528 29412 -2 - 117 hypothetical protein - none -
fig|6666666.230106.peg.891 CDS DS362237.1 29479 30975 1 + 1497 Ferredoxin-type protein NapG (periplasmic nitrate reductase) Nitrate and nitrite ammonification
fig|6666666.230106.peg.892 CDS DS362237.1 30997 32397 1 + 1401 Fe-S oxidoreductase - none -
fig|6666666.230106.peg.893 CDS DS362237.1 32399 32815 2 + 417 FIG00407892: hypothetical protein - none -
fig|6666666.230106.peg.894 CDS DS362237.1 34540 32840 -1 - 1701 Integral membrane protein - none -
fig|6666666.230106.peg.895 CDS DS362237.1 35681 34527 -2 - 1155 Outer membrane protein/protective antigen OMA87 - none -
fig|6666666.230106.peg.896 CDS DS362237.1 35941 37215 1 + 1275 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.230106.peg.897 CDS DS362237.1 37272 37709 3 + 438 DoxX family protein - none -
fig|6666666.230106.peg.898 CDS DS362237.1 37842 38402 3 + 561 FIG00406097: hypothetical protein - none -
fig|6666666.230106.peg.899 CDS DS362237.1 40793 38484 -2 - 2310 FIG00898528: hypothetical protein - none -
fig|6666666.230106.peg.900 CDS DS362237.1 40937 41698 2 + 762 tRNA (guanosine(18)-2@1-O)-methyltransferase (EC 2.1.1.34) RNA methylation;
tRNA modification Bacteria
fig|6666666.230106.peg.901 CDS DS362237.1 42904 41978 -1 - 927 FIG00405766: hypothetical protein - none -
fig|6666666.230106.peg.902 CDS DS362237.1 43533 42901 -3 - 633 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.230106.peg.903 CDS DS362237.1 43916 43536 -2 - 381 DnaK suppressor protein, putative - none -
fig|6666666.230106.peg.904 CDS DS362237.1 47438 43950 -2 - 3489 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.230106.peg.905 CDS DS362237.1 47758 48672 1 + 915 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.230106.peg.906 CDS DS362237.1 48679 49539 1 + 861 Type II restriction enzyme DpnII (EC 3.1.21.4) (Endonuclease DpnII) (R.DpnII) - none -
fig|6666666.230106.peg.907 CDS DS362237.1 49548 50069 3 + 522 hypothetical protein - none -
fig|6666666.230106.peg.908 CDS DS362237.1 50066 50938 2 + 873 DNA modification methyltransferase (EC 2.1.1.-) - none -
fig|6666666.230106.peg.909 CDS DS362237.1 51150 51019 -3 - 132 hypothetical protein - none -
fig|6666666.230106.peg.910 CDS DS362237.1 52019 51213 -2 - 807 hypothetical protein - none -
fig|6666666.230106.peg.911 CDS DS362237.1 52240 52073 -1 - 168 hypothetical protein - none -
fig|6666666.230106.peg.912 CDS DS362237.1 53769 52237 -3 - 1533 Aliphatic amidase AmiE (EC 3.5.1.4) - none -
fig|6666666.230106.peg.913 CDS DS362237.1 55449 53962 -3 - 1488 D-xylose proton-symporter XylE Xylose utilization
fig|6666666.230106.peg.914 CDS DS362237.1 56880 55564 -3 - 1317 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.230106.peg.915 CDS DS362237.1 58464 56986 -3 - 1479 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.230106.peg.916 CDS DS362237.1 59243 58512 -2 - 732 Hypothetical Nudix-like regulator - none -
fig|6666666.230106.peg.917 CDS DS362237.1 59558 59430 -2 - 129 hypothetical protein - none -
fig|6666666.230106.peg.918 CDS DS362237.1 59642 60529 2 + 888 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.230106.peg.919 CDS DS362237.1 60628 61179 1 + 552 FIG00403486: hypothetical protein - none -
fig|6666666.230106.peg.920 CDS DS362237.1 61372 61611 1 + 240 Sulfur carrier protein ThiS Thiamin biosynthesis
fig|6666666.230106.peg.921 CDS DS362237.1 61608 62267 3 + 660 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.230106.peg.922 CDS DS362237.1 62279 63070 2 + 792 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.230106.peg.923 CDS DS362237.1 63228 64910 3 + 1683 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) - none -
fig|6666666.230106.peg.924 CDS DS362237.1 64931 66064 2 + 1134 2-iminoacetate synthase (ThiH) (EC 4.1.99.19) - none -
fig|6666666.230106.peg.925 CDS DS362237.1 66100 66795 1 + 696 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.230106.peg.926 CDS DS362237.1 66814 67416 1 + 603 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.230106.peg.927 CDS DS362237.1 67438 68265 1 + 828 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.230106.peg.928 CDS DS362237.1 69021 68374 -3 - 648 hypothetical protein - none -
fig|6666666.230106.peg.929 CDS DS362237.1 69190 70311 1 + 1122 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.230106.peg.930 CDS DS362237.1 70363 70737 1 + 375 hypothetical protein - none -
fig|6666666.230106.peg.931 CDS DS362237.1 71489 72454 2 + 966 putative transposable insertion element - none -
fig|6666666.230106.peg.932 CDS DS362237.1 72814 73626 1 + 813 hypothetical protein - none -
fig|6666666.230106.peg.933 CDS DS362237.1 73697 73906 2 + 210 hypothetical protein - none -
fig|6666666.230106.peg.934 CDS DS362237.1 73927 74688 1 + 762 hypothetical protein - none -
fig|6666666.230106.peg.935 CDS DS362237.1 74929 75345 1 + 417 hypothetical protein - none -
fig|6666666.230106.peg.936 CDS DS362237.1 75467 75637 2 + 171 hypothetical protein - none -
fig|6666666.230106.peg.937 CDS DS362237.1 75923 76732 2 + 810 UPF0028 protein YchK Broadly distributed proteins not in subsystems
fig|6666666.230106.peg.938 CDS DS362237.1 76765 78462 1 + 1698 Alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.230106.peg.939 CDS DS362237.1 78797 78567 -2 - 231 FIG00412253: hypothetical protein - none -
fig|6666666.230106.peg.940 CDS DS362237.1 79133 79798 2 + 666 FIG00403581: hypothetical protein - none -
fig|6666666.230106.peg.941 CDS DS362237.1 79833 80279 3 + 447 probable beta-D-galactosidase Galactosylceramide and Sulfatide metabolism
fig|6666666.230106.peg.942 CDS DS362237.1 80311 82320 1 + 2010 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.230106.peg.943 CDS DS362237.1 83104 82391 -1 - 714 FIG00414131: hypothetical protein - none -
fig|6666666.230106.peg.944 CDS DS362237.1 83314 83547 1 + 234 FIG00413734: hypothetical protein - none -
fig|6666666.230106.peg.945 CDS DS362237.1 83859 84818 3 + 960 Esterase - none -
fig|6666666.230106.peg.946 CDS DS362237.1 85328 86719 2 + 1392 Integrase IntN1 - none -
fig|6666666.230106.peg.947 CDS DS362237.1 87092 86811 -2 - 282 hypothetical protein - none -
fig|6666666.230106.peg.948 CDS DS362237.1 87473 87306 -2 - 168 hypothetical protein - none -
fig|6666666.230106.peg.949 CDS DS362237.1 89908 88418 -1 - 1491 hypothetical protein - none -
fig|6666666.230106.peg.950 CDS DS362237.1 90465 90007 -3 - 459 hypothetical protein - none -
fig|6666666.230106.peg.951 CDS DS362237.1 90863 90462 -2 - 402 Phage protein inside capsid D - none -
fig|6666666.230106.peg.952 CDS DS362237.1 91211 90891 -2 - 321 hypothetical protein - none -
fig|6666666.230106.peg.953 CDS DS362237.1 91683 91243 -3 - 441 hypothetical protein - none -
fig|6666666.230106.peg.954 CDS DS362237.1 92327 91743 -2 - 585 hypothetical protein - none -
fig|6666666.230106.peg.955 CDS DS362237.1 93181 92333 -1 - 849 hypothetical protein - none -
fig|6666666.230106.peg.956 CDS DS362237.1 93943 93344 -1 - 600 Mobile element protein - none -
fig|6666666.230106.peg.957 CDS DS362238.1 2530 2670 1 + 141 hypothetical protein - none -
fig|6666666.230106.peg.958 CDS DS362238.1 3412 2804 -1 - 609 putative DNA-binding protein - none -
fig|6666666.230106.peg.959 CDS DS362238.1 3477 3623 3 + 147 hypothetical protein - none -
fig|6666666.230106.peg.960 CDS DS362238.1 4376 3657 -2 - 720 FIG00402811: hypothetical protein - none -
fig|6666666.230106.peg.961 CDS DS362238.1 4399 4524 1 + 126 hypothetical protein - none -
fig|6666666.230106.peg.962 CDS DS362238.1 5963 4563 -2 - 1401 Outer membrane protein oprM - none -
fig|6666666.230106.peg.963 CDS DS362238.1 9186 5995 -3 - 3192 RND efflux system, inner membrane transporter CmeB Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.964 CDS DS362238.1 10304 9207 -2 - 1098 Multidrug resistance protein - none -
fig|6666666.230106.peg.965 CDS DS362238.1 10513 11349 1 + 837 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.966 CDS DS362238.1 11440 13107 1 + 1668 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230106.peg.967 CDS DS362238.1 14616 13108 -3 - 1509 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) - none -
fig|6666666.230106.peg.968 CDS DS362238.1 15307 14603 -1 - 705 putative periplasmic protein - none -
fig|6666666.230106.peg.969 CDS DS362238.1 15308 15499 2 + 192 hypothetical protein - none -
fig|6666666.230106.peg.970 CDS DS362238.1 16901 15522 -2 - 1380 putative periplasmic protein - none -
fig|6666666.230106.peg.971 CDS DS362238.1 17318 17025 -2 - 294 FIG00936253: hypothetical protein - none -
fig|6666666.230106.peg.972 CDS DS362238.1 20540 17370 -2 - 3171 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA Cobalt-zinc-cadmium resistance;
Cobalt-zinc-cadmium resistance
fig|6666666.230106.peg.973 CDS DS362238.1 21686 20643 -2 - 1044 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.230106.peg.974 CDS DS362238.1 23055 21697 -3 - 1359 Outer membrane efflux protein precursor - none -
fig|6666666.230106.peg.975 CDS DS362238.1 23640 23083 -3 - 558 Transcriptional regulator, TetR family - none -
fig|6666666.230106.peg.976 CDS DS362238.1 25397 23901 -2 - 1497 Histidine ammonia-lyase (EC 4.3.1.3) Histidine Degradation
fig|6666666.230106.peg.977 CDS DS362238.1 26023 25394 -1 - 630 Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.230106.peg.978 CDS DS362238.1 27324 26062 -3 - 1263 Imidazolonepropionase (EC 3.5.2.7) Histidine Degradation
fig|6666666.230106.peg.979 CDS DS362238.1 28278 27388 -3 - 891 Glutamate formiminotransferase (EC 2.1.2.5) @ Glutamate formyltransferase 5-FCL-like protein;
Histidine Degradation
fig|6666666.230106.peg.980 CDS DS362238.1 30407 28425 -2 - 1983 Urocanate hydratase (EC 4.2.1.49) Histidine Degradation
fig|6666666.230106.peg.981 CDS DS362238.1 30759 30631 -3 - 129 hypothetical protein - none -
fig|6666666.230106.peg.982 CDS DS362238.1 30788 31456 2 + 669 hypothetical protein - none -
fig|6666666.230106.peg.983 CDS DS362238.1 31834 31484 -1 - 351 FIG00406490: hypothetical protein - none -
fig|6666666.230106.peg.984 CDS DS362238.1 31956 31831 -3 - 126 hypothetical protein - none -
fig|6666666.230106.peg.985 CDS DS362238.1 32268 32546 3 + 279 FIG00417315: hypothetical protein - none -
fig|6666666.230106.peg.986 CDS DS362238.1 32543 33163 2 + 621 putative surface protein - none -
fig|6666666.230106.peg.987 CDS DS362238.1 33845 33393 -2 - 453 FIG00414833: hypothetical protein - none -
fig|6666666.230106.peg.988 CDS DS362238.1 34552 33857 -1 - 696 FIG00405371: hypothetical protein - none -
fig|6666666.230106.peg.989 CDS DS362238.1 34598 36526 2 + 1929 MutS-related protein, family 1 DNA repair, bacterial MutL-MutS system
fig|6666666.230106.peg.990 CDS DS362238.1 37106 36567 -2 - 540 FIG00404196: hypothetical protein - none -
fig|6666666.230106.peg.991 CDS DS362238.1 37599 37216 -3 - 384 FIG00404648: hypothetical protein - none -
fig|6666666.230106.peg.992 CDS DS362238.1 38217 37771 -3 - 447 LSU ribosomal protein L17p - none -
fig|6666666.230106.peg.993 CDS DS362238.1 39270 38278 -3 - 993 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.230106.peg.994 CDS DS362238.1 39887 39282 -2 - 606 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.230106.peg.995 CDS DS362238.1 40394 40005 -2 - 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.230106.peg.996 CDS DS362238.1 40786 40406 -1 - 381 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.230106.peg.997 CDS DS362238.1 41165 40947 -2 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.230106.peg.998 CDS DS362238.1 41975 41175 -2 - 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.230106.peg.999 CDS DS362238.1 43143 41989 -3 - 1155 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.230106.peg.1000 CDS DS362238.1 43783 43337 -1 - 447 LSU ribosomal protein L15p (L27Ae) - none -
fig|6666666.230106.peg.1001 CDS DS362238.1 44520 44002 -3 - 519 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation;
Ribosome SSU bacterial
fig|6666666.230106.peg.1002 CDS DS362238.1 44789 44526 -2 - 264 LSU ribosomal protein L18p (L5e) - none -
fig|6666666.230106.peg.1003 CDS DS362238.1 45460 44891 -1 - 570 LSU ribosomal protein L6p (L9e) - none -
fig|6666666.230106.peg.1004 CDS DS362238.1 45805 45476 -1 - 330 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.230106.peg.1005 CDS DS362238.1 46226 45927 -2 - 300 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.230106.peg.1006 CDS DS362238.1 46788 46231 -3 - 558 LSU ribosomal protein L5p (L11e) - none -
fig|6666666.230106.peg.1007 CDS DS362238.1 47108 46788 -2 - 321 LSU ribosomal protein L24p (L26e) - none -
fig|6666666.230106.peg.1008 CDS DS362238.1 47494 47129 -1 - 366 LSU ribosomal protein L14p (L23e) - none -
fig|6666666.230106.peg.1009 CDS DS362238.1 47754 47497 -3 - 258 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.230106.peg.1010 CDS DS362238.1 47960 47763 -2 - 198 LSU ribosomal protein L29p (L35e) - none -
fig|6666666.230106.peg.1011 CDS DS362238.1 48292 47966 -1 - 327 LSU ribosomal protein L16p (L10e) - none -
fig|6666666.230106.peg.1012 CDS DS362238.1 49153 48422 -1 - 732 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.230106.peg.1013 CDS DS362238.1 49440 49159 -3 - 282 LSU ribosomal protein L22p (L17e) - none -
fig|6666666.230106.peg.1014 CDS DS362238.1 49568 49449 -2 - 120 LSU ribosomal protein L22p (L17e) - none -
fig|6666666.230106.peg.1015 CDS DS362238.1 49811 49605 -2 - 207 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.230106.peg.1016 CDS DS362238.1 50719 49895 -1 - 825 LSU ribosomal protein L2p (L8e) - none -
fig|6666666.230106.peg.1017 CDS DS362238.1 50982 50725 -3 - 258 LSU ribosomal protein L23p (L23Ae) - none -
fig|6666666.230106.peg.1018 CDS DS362238.1 51541 51035 -1 - 507 LSU ribosomal protein L4p (L1e) - none -
fig|6666666.230106.peg.1019 CDS DS362238.1 52248 51661 -3 - 588 LSU ribosomal protein L3p (L3e) - none -
fig|6666666.230106.peg.1020 CDS DS362238.1 52603 52298 -1 - 306 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.230106.peg.1021 CDS DS362238.1 54787 52691 -1 - 2097 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.230106.peg.1022 CDS DS362238.1 55256 54867 -2 - 390 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.230106.peg.1023 CDS DS362238.1 55900 55499 -1 - 402 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.230106.peg.1024 CDS DS362238.1 56329 56018 -1 - 312 FIG00649583: hypothetical protein - none -
fig|6666666.230106.peg.1025 CDS DS362238.1 60893 56598 -2 - 4296 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.230106.peg.1026 CDS DS362238.1 64814 61002 -2 - 3813 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.230106.peg.1027 CDS DS362238.1 65297 64920 -2 - 378 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster
fig|6666666.230106.peg.1028 CDS DS362238.1 65880 65359 -3 - 522 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster
fig|6666666.230106.peg.1029 CDS DS362238.1 66594 65896 -3 - 699 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster
fig|6666666.230106.peg.1030 CDS DS362238.1 67053 66610 -3 - 444 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster
fig|6666666.230106.peg.1031 CDS DS362238.1 67655 67113 -2 - 543 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.230106.peg.1032 CDS DS362238.1 67856 67668 -2 - 189 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.230106.peg.1033 CDS DS362238.1 69184 68000 -1 - 1185 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.230106.peg.1034 CDS DS362238.1 69919 69698 -1 - 222 Ribosome hibernation protein YhbH Ribosome activity modulation
fig|6666666.230106.peg.1035 CDS DS362238.1 70900 70016 -1 - 885 Integrase, site-specific recombinase - none -
fig|6666666.230106.peg.1036 CDS DS362238.1 71165 70974 -2 - 192 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.230106.peg.1037 CDS DS362238.1 71379 73238 3 + 1860 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-)
fig|6666666.230106.peg.1038 CDS DS362238.1 73243 73755 1 + 513 N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230106.peg.1039 CDS DS362238.1 75068 73848 -2 - 1221 Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase (EC 2.4.99.12) [often with (EC 2.4.99.13) also] - none -
fig|6666666.230106.peg.1040 CDS DS362238.1 76626 75100 -3 - 1527 Glutamyl-tRNA synthetase (EC 6.1.1.17) tRNA aminoacylation, Glu and Gln
fig|6666666.230106.peg.1041 CDS DS362238.1 76724 78784 2 + 2061 Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog CBSS-56780.10.peg.1536
fig|6666666.230106.peg.1042 CDS DS362238.1 78790 79554 1 + 765 FIG00412745: hypothetical protein - none -
fig|6666666.230106.peg.1043 CDS DS362238.1 79688 80641 2 + 954 Mobile element protein - none -
fig|6666666.230106.peg.1044 CDS DS362238.1 81120 84389 3 + 3270 putative cell surface protein - none -
fig|6666666.230106.peg.1045 CDS DS362238.1 84480 84821 3 + 342 hypothetical protein - none -
fig|6666666.230106.peg.1046 CDS DS362238.1 84986 86113 2 + 1128 hypothetical protein - none -
fig|6666666.230106.peg.1047 CDS DS362238.1 86070 86249 3 + 180 hypothetical protein - none -
fig|6666666.230106.peg.1048 CDS DS362238.1 86511 86624 3 + 114 hypothetical protein - none -
fig|6666666.230106.peg.1049 CDS DS362238.1 87241 88194 1 + 954 Mobile element protein - none -
fig|6666666.230106.peg.1050 CDS DS362238.1 88650 91796 3 + 3147 putative cell surface protein - none -
fig|6666666.230106.peg.1051 CDS DS362238.1 91872 92219 3 + 348 hypothetical protein - none -
fig|6666666.230106.peg.1052 CDS DS362238.1 92331 92203 -3 - 129 hypothetical protein - none -
fig|6666666.230106.peg.1053 CDS DS362238.1 92489 92373 -2 - 117 hypothetical protein - none -
fig|6666666.230106.peg.1054 CDS DS362238.1 92650 92522 -1 - 129 hypothetical protein - none -
fig|6666666.230106.peg.1055 CDS DS362238.1 93001 93795 1 + 795 Mobile element protein - none -
fig|6666666.230106.peg.1056 CDS DS362238.1 94109 93969 -2 - 141 hypothetical protein - none -
fig|6666666.230106.peg.1057 CDS DS362238.1 94474 94292 -1 - 183 FIG00409677: hypothetical protein - none -
fig|6666666.230106.peg.1058 CDS DS362238.1 94979 95353 2 + 375 Thiamin biosynthesis lipoprotein ApbE Iron-sulfur cluster assembly
fig|6666666.230106.peg.1059 CDS DS362238.1 95455 95691 1 + 237 hypothetical protein - none -
fig|6666666.230106.peg.1060 CDS DS362238.1 96002 96307 2 + 306 FIG00416767: hypothetical protein - none -
fig|6666666.230106.peg.1061 CDS DS362238.1 96662 96546 -2 - 117 hypothetical protein - none -
fig|6666666.230106.peg.1062 CDS DS362238.1 96691 97116 1 + 426 Mobile element protein - none -
fig|6666666.230106.peg.1063 CDS DS362238.1 97092 97529 3 + 438 Mobile element protein - none -
fig|6666666.230106.peg.1064 CDS DS362238.1 97565 97951 2 + 387 Mobile element protein - none -
fig|6666666.230106.peg.1065 CDS DS362238.1 98230 98093 -1 - 138 hypothetical protein - none -
fig|6666666.230106.peg.1066 CDS DS362238.1 98349 98483 3 + 135 hypothetical protein - none -
fig|6666666.230106.peg.1067 CDS DS362238.1 98694 98515 -3 - 180 hypothetical protein - none -
fig|6666666.230106.peg.1068 CDS DS362238.1 99213 99371 3 + 159 FIG00409095: hypothetical protein - none -
fig|6666666.230106.peg.1069 CDS DS362238.1 99397 99984 1 + 588 ferritin A - none -
fig|6666666.230106.peg.1070 CDS DS362238.1 100138 100734 1 + 597 Multiple antibiotic resistance protein marC - none -
fig|6666666.230106.peg.1071 CDS DS362238.1 100785 101267 3 + 483 Ferritin-like protein 2 Iron-sulfur cluster assembly
fig|6666666.230106.peg.1072 CDS DS362238.1 101296 102345 1 + 1050 Fructose-bisphosphate aldolase class I (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.230106.peg.1073 CDS DS362238.1 102359 103108 2 + 750 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.230106.peg.1074 CDS DS362238.1 103184 103612 2 + 429 Small heat shock protein - none -
fig|6666666.230106.peg.1075 CDS DS362238.1 103714 104211 1 + 498 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.1076 CDS DS362238.1 104234 105220 2 + 987 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.230106.peg.1077 CDS DS362238.1 105234 107480 3 + 2247 POTASSIUM/PROTON ANTIPORTER ROSB Potassium homeostasis
fig|6666666.230106.peg.1078 CDS DS362238.1 107508 110066 3 + 2559 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.1079 CDS DS362238.1 110098 110892 1 + 795 Arginase (EC 3.5.3.1) Arginine and Ornithine Degradation
fig|6666666.230106.peg.1080 CDS DS362238.1 110945 111481 2 + 537 Methylglyoxal synthase (EC 4.2.3.3) Methylglyoxal Metabolism
fig|6666666.230106.peg.1081 CDS DS362238.1 112632 112495 -3 - 138 hypothetical protein - none -
fig|6666666.230106.peg.1082 CDS DS362238.1 112815 113027 3 + 213 FIG00405850: hypothetical protein - none -
fig|6666666.230106.peg.1083 CDS DS362238.1 113295 113414 3 + 120 hypothetical protein - none -
fig|6666666.230106.peg.1084 CDS DS362238.1 113631 113924 3 + 294 hypothetical protein - none -
fig|6666666.230106.peg.1085 CDS DS362238.1 115201 113990 -1 - 1212 Mobile element protein - none -
fig|6666666.230106.peg.1086 CDS DS362238.1 116531 115221 -2 - 1311 Mobile element protein - none -
fig|6666666.230106.peg.1087 CDS DS362238.1 116765 116929 2 + 165 Mobile element protein - none -
fig|6666666.230106.peg.1088 CDS DS362238.1 117098 117265 2 + 168 hypothetical protein - none -
fig|6666666.230106.peg.1089 CDS DS362238.1 117407 120349 2 + 2943 hypothetical protein - none -
fig|6666666.230106.peg.1090 CDS DS362238.1 120563 120450 -2 - 114 hypothetical protein - none -
fig|6666666.230106.peg.1091 CDS DS362238.1 120807 123272 3 + 2466 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.230106.peg.1092 CDS DS362238.1 123294 123755 3 + 462 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster
fig|6666666.230106.peg.1093 CDS DS362238.1 125893 123752 -1 - 2142 putative helicase - none -
fig|6666666.230106.peg.1094 CDS DS362238.1 126243 126866 3 + 624 FIG00416553: hypothetical protein - none -
fig|6666666.230106.peg.1095 CDS DS362238.1 127380 127042 -3 - 339 hypothetical protein - none -
fig|6666666.230106.peg.1096 CDS DS362238.1 130688 127479 -2 - 3210 putative cell surface protein - none -
fig|6666666.230106.peg.1097 CDS DS362238.1 132078 131125 -3 - 954 Mobile element protein - none -
fig|6666666.230106.peg.1098 CDS DS362238.1 132344 132159 -2 - 186 hypothetical protein - none -
fig|6666666.230106.peg.1099 CDS DS362239.1 958 1938 1 + 981 hypothetical protein - none -
fig|6666666.230106.peg.1100 CDS DS362239.1 4441 2114 -1 - 2328 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.1101 CDS DS362239.1 5642 4446 -2 - 1197 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230106.peg.1102 CDS DS362239.1 6893 5688 -2 - 1206 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230106.peg.1103 CDS DS362239.1 7809 6925 -3 - 885 Endo-1,4-beta-xylanase Z - none -
fig|6666666.230106.peg.1104 CDS DS362239.1 10263 7897 -3 - 2367 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.1105 CDS DS362239.1 11967 10417 -3 - 1551 FIG00411172: hypothetical protein - none -
fig|6666666.230106.peg.1106 CDS DS362239.1 15150 12019 -3 - 3132 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.1107 CDS DS362239.1 16834 15200 -1 - 1635 Carboxylesterase type B - none -
fig|6666666.230106.peg.1108 CDS DS362239.1 17142 21167 3 + 4026 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.1109 CDS DS362239.1 21230 21628 2 + 399 FIG00402719: hypothetical protein - none -
fig|6666666.230106.peg.1110 CDS DS362239.1 22653 21943 -3 - 711 Putative predicted metal-dependent hydrolase Restriction-Modification System
fig|6666666.230106.peg.1111 CDS DS362239.1 22941 23801 3 + 861 FIG00402937: hypothetical protein - none -
fig|6666666.230106.peg.1112 CDS DS362239.1 26287 23951 -1 - 2337 FIG00413484: hypothetical protein - none -
fig|6666666.230106.peg.1113 CDS DS362239.1 26704 26300 -1 - 405 hypothetical protein - none -
fig|6666666.230106.peg.1114 CDS DS362239.1 28503 26860 -3 - 1644 TPR-repeat-containing proteins - none -
fig|6666666.230106.peg.1115 CDS DS362239.1 29301 28819 -3 - 483 FIG00404769: hypothetical protein - none -
fig|6666666.230106.peg.1116 CDS DS362239.1 29698 29291 -1 - 408 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.1117 CDS DS362239.1 30631 29861 -1 - 771 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230106.peg.1118 CDS DS362239.1 32525 30633 -2 - 1893 Biosynthetic arginine decarboxylase (EC 4.1.1.19) Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.230106.peg.1119 CDS DS362239.1 33188 32661 -2 - 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.230106.peg.1120 CDS DS362239.1 33888 33286 -3 - 603 Nitroreductase family protein - none -
fig|6666666.230106.peg.1121 CDS DS362239.1 34616 33966 -2 - 651 hypothetical protein - none -
fig|6666666.230106.peg.1122 CDS DS362239.1 34784 34969 2 + 186 hypothetical protein - none -
fig|6666666.230106.peg.1123 CDS DS362239.1 35243 34983 -2 - 261 hypothetical protein - none -
fig|6666666.230106.peg.1124 CDS DS362239.1 36157 35240 -1 - 918 ISSpo3, transposase - none -
fig|6666666.230106.peg.1125 CDS DS362239.1 36678 37349 3 + 672 Ribonuclease HI-related protein 3 Ribonuclease H
fig|6666666.230106.peg.1126 CDS DS362239.1 37313 37429 2 + 117 hypothetical protein - none -
fig|6666666.230106.peg.1127 CDS DS362239.1 38330 37443 -2 - 888 Sugar phosphate isomerase/epimerase - none -
fig|6666666.230106.peg.1128 CDS DS362239.1 39243 38368 -3 - 876 Probable secreted glycosyl hydrolase - none -
fig|6666666.230106.peg.1129 CDS DS362239.1 40802 39315 -2 - 1488 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) - none -
fig|6666666.230106.peg.1130 CDS DS362239.1 41948 40869 -2 - 1080 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) - none -
fig|6666666.230106.peg.1131 CDS DS362239.1 44210 42372 -2 - 1839 ABC transporter, ATP-binding protein - none -
fig|6666666.230106.peg.1132 CDS DS362239.1 44519 46099 2 + 1581 FIG00414179: hypothetical protein - none -
fig|6666666.230106.peg.1133 CDS DS362239.1 46592 46732 2 + 141 hypothetical protein - none -
fig|6666666.230106.peg.1134 CDS DS362239.1 46692 48641 3 + 1950 FIG00413783: hypothetical protein - none -
fig|6666666.230106.peg.1135 CDS DS362239.1 48769 49392 1 + 624 FIG00408365: hypothetical protein - none -
fig|6666666.230106.peg.1136 CDS DS362239.1 50434 49523 -1 - 912 FIG00416846: hypothetical protein - none -
fig|6666666.230106.peg.1137 CDS DS362239.1 51323 50439 -2 - 885 Beta-1,3-glucosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.230106.peg.1138 CDS DS362239.1 52568 51429 -2 - 1140 Glycosyl transferase, group 1 CBSS-258594.1.peg.3339
fig|6666666.230106.peg.1139 CDS DS362239.1 53455 52580 -1 - 876 Streptomycin biosynthesis StrF domain protein - none -
fig|6666666.230106.peg.1140 CDS DS362239.1 54751 53468 -1 - 1284 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230106.peg.1141 CDS DS362239.1 55695 54751 -3 - 945 Putative N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase Teichuronic acid biosynthesis
fig|6666666.230106.peg.1142 CDS DS362239.1 56696 55692 -2 - 1005 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230106.peg.1143 CDS DS362239.1 57732 56788 -3 - 945 Glycosyl transferase, family 2 - none -
fig|6666666.230106.peg.1144 CDS DS362239.1 58704 57811 -3 - 894 CDP-glycerol: N-acetyl-beta-D-mannosaminyl-1,4-N-acetyl-D-glucosaminyldiphosphoundecaprenyl glycerophosphotransferase Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230106.peg.1145 CDS DS362239.1 58720 58860 1 + 141 hypothetical protein - none -
fig|6666666.230106.peg.1146 CDS DS362239.1 59175 59047 -3 - 129 hypothetical protein - none -
fig|6666666.230106.peg.1147 CDS DS362239.1 59137 60951 1 + 1815 Phosphoglycerol transferase MdoB related protein, alkaline phosphatase superfamily - none -
fig|6666666.230106.peg.1148 CDS DS362239.1 61035 61784 3 + 750 FIG00414762: hypothetical protein - none -
fig|6666666.230106.peg.1149 CDS DS362239.1 61821 62402 3 + 582 Phosphoheptose isomerase 1 (EC 5.3.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.230106.peg.1150 CDS DS362239.1 62395 62883 1 + 489 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.230106.peg.1151 CDS DS362239.1 62880 64310 3 + 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.230106.peg.1152 CDS DS362239.1 65289 64291 -3 - 999 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.230106.peg.1153 CDS DS362239.1 65598 66515 3 + 918 PUTATIVE SIGNAL PEPTIDE PROTEIN - none -
fig|6666666.230106.peg.1154 CDS DS362239.1 67364 66537 -2 - 828 Lipopolysaccharide cholinephosphotransferase LicD1 (EC 2.7.8.-) - none -
fig|6666666.230106.peg.1155 CDS DS362239.1 68113 67382 -1 - 732 Choline permease LicB - none -
fig|6666666.230106.peg.1156 CDS DS362239.1 69147 68110 -3 - 1038 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.230106.peg.1157 CDS DS362239.1 70296 69151 -3 - 1146 mannosyltransferase - none -
fig|6666666.230106.peg.1158 CDS DS362239.1 70540 70382 -1 - 159 hypothetical protein - none -
fig|6666666.230106.peg.1159 CDS DS362239.1 70926 71969 3 + 1044 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230106.peg.1160 CDS DS362239.1 72086 73939 2 + 1854 FIG00416859: hypothetical protein - none -
fig|6666666.230106.peg.1161 CDS DS362239.1 74517 73930 -3 - 588 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
De Novo Purine Biosynthesis
fig|6666666.230106.peg.1162 CDS DS362239.1 74667 74903 3 + 237 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230106.peg.1163 CDS DS362239.1 74925 76190 3 + 1266 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) - none -
fig|6666666.230106.peg.1164 CDS DS362239.1 76326 76201 -3 - 126 hypothetical protein - none -
fig|6666666.230106.peg.1165 CDS DS362239.1 76231 77076 1 + 846 Ribonuclease III (EC 3.1.26.3) RNA processing and degradation, bacterial
fig|6666666.230106.peg.1166 CDS DS362239.1 78045 77035 -3 - 1011 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.230106.peg.1167 CDS DS362239.1 78168 79679 3 + 1512 putative auxin-regulated protein - none -
fig|6666666.230106.peg.1168 CDS DS362239.1 80685 79825 -3 - 861 FIG00897142: hypothetical protein - none -
fig|6666666.230106.peg.1169 CDS DS362239.1 81897 80806 -3 - 1092 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.230106.peg.1170 CDS DS362239.1 81984 83459 3 + 1476 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.230106.peg.1171 CDS DS362239.1 85654 83618 -1 - 2037 putative patatin-like phospholipase - none -
fig|6666666.230106.peg.1172 CDS DS362239.1 86678 85794 -2 - 885 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230106.peg.1173 CDS DS362239.1 87337 86666 -1 - 672 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230106.peg.1174 CDS DS362239.1 88533 87334 -3 - 1200 Glucuronyl hydrolase - none -
fig|6666666.230106.peg.1175 CDS DS362239.1 88712 89155 2 + 444 Phenylacetic acid degradation protein PaaD, thioesterase - none -
fig|6666666.230106.peg.1176 CDS DS362239.1 89208 89804 3 + 597 hypothetical protein - none -
fig|6666666.230106.peg.1177 CDS DS362239.1 91884 89929 -3 - 1956 FIG00899092: hypothetical protein - none -
fig|6666666.230106.peg.1178 CDS DS362239.1 92193 93371 3 + 1179 Membrane fusion protein of RND family multidrug efflux pump Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.1179 CDS DS362239.1 93426 96845 3 + 3420 RND efflux system, inner membrane transporter CmeB Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.1180 CDS DS362239.1 96886 98250 1 + 1365 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.1181 CDS DS362239.1 98350 99117 1 + 768 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) Llipid A biosynthesis cluster
fig|6666666.230106.peg.1182 CDS DS362239.1 100410 99676 -3 - 735 FIG00406137: hypothetical protein - none -
fig|6666666.230106.peg.1183 CDS DS362239.1 101483 100401 -2 - 1083 MdsC protein - none -
fig|6666666.230106.peg.1184 CDS DS362239.1 101715 105746 3 + 4032 FIG00939280: hypothetical protein - none -
fig|6666666.230106.peg.1185 CDS DS362239.1 105884 105756 -2 - 129 hypothetical protein - none -
fig|6666666.230106.peg.1186 CDS DS362239.1 105876 107435 3 + 1560 Arylsulfatase (EC 3.1.6.1) Galactosylceramide and Sulfatide metabolism
fig|6666666.230106.peg.1187 CDS DS362239.1 107606 110686 2 + 3081 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.1188 CDS DS362239.1 110752 112203 1 + 1452 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.1189 CDS DS362239.1 115254 112609 -3 - 2646 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.1190 CDS DS362239.1 117743 115263 -2 - 2481 chondroitinase AC precursor - none -
fig|6666666.230106.peg.1191 CDS DS362239.1 117883 117722 -1 - 162 hypothetical protein - none -
fig|6666666.230106.peg.1192 CDS DS362239.1 117938 119071 2 + 1134 FIG01093326: hypothetical protein - none -
fig|6666666.230106.peg.1193 CDS DS362239.1 119074 120042 1 + 969 Probable transcriptional regulator - none -
fig|6666666.230106.peg.1194 CDS DS362239.1 123337 120251 -1 - 3087 Chondroitinase (chondroitin lyase) - none -
fig|6666666.230106.peg.1195 CDS DS362239.1 124033 123344 -1 - 690 FIG00411032: hypothetical protein - none -
fig|6666666.230106.peg.1196 CDS DS362239.1 124660 124148 -1 - 513 FIG00407889: hypothetical protein - none -
fig|6666666.230106.peg.1197 CDS DS362239.1 126012 124738 -3 - 1275 FIG00937754: hypothetical protein - none -
fig|6666666.230106.peg.1198 CDS DS362239.1 126109 126873 1 + 765 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230106.peg.1199 CDS DS362239.1 126880 128373 1 + 1494 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.230106.peg.1200 CDS DS362239.1 128370 129305 3 + 936 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.230106.peg.1201 CDS DS362239.1 129395 130036 2 + 642 FIG00649844: hypothetical protein - none -
fig|6666666.230106.peg.1202 CDS DS362239.1 130040 131272 2 + 1233 Glucuronyl hydrolase - none -
fig|6666666.230106.peg.1203 CDS DS362239.1 131395 132207 1 + 813 D-mannonate oxidoreductase (EC 1.1.1.57) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230106.peg.1204 CDS DS362239.1 132242 133414 2 + 1173 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230106.peg.1205 CDS DS362239.1 134202 133549 -3 - 654 Aquaporin Z Osmoregulation
fig|6666666.230106.peg.1206 CDS DS362239.1 136698 134473 -3 - 2226 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.1207 CDS DS362239.1 138309 137059 -3 - 1251 Endoglucanase C (EC 3.2.1.4) - none -
fig|6666666.230106.peg.1208 CDS DS362239.1 140113 138515 -1 - 1599 Regulatory protein SusR Cellulosome
fig|6666666.230106.peg.1209 CDS DS362239.1 140271 141398 3 + 1128 N-acetylglucosamine related transporter, NagX - none -
fig|6666666.230106.peg.1210 CDS DS362239.1 141398 141997 2 + 600 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.230106.peg.1211 CDS DS362239.1 143231 141984 -2 - 1248 FIG007959: peptidase, M16 family CBSS-1806.1.peg.3045;
CBSS-350688.3.peg.1509
fig|6666666.230106.peg.1212 CDS DS362239.1 143415 144020 3 + 606 Arabinose 5-phosphate isomerase (EC 5.3.1.13) - none -
fig|6666666.230106.peg.1213 CDS DS362239.1 144008 144937 2 + 930 Fructokinase (EC 2.7.1.4) Sucrose utilization
fig|6666666.230106.peg.1214 CDS DS362239.1 145101 146483 3 + 1383 FIG00415543: hypothetical protein - none -
fig|6666666.230106.peg.1215 CDS DS362239.1 146480 147094 2 + 615 hypothetical protein - none -
fig|6666666.230106.peg.1216 CDS DS362239.1 147131 147748 2 + 618 hypothetical protein - none -
fig|6666666.230106.peg.1217 CDS DS362239.1 147913 148962 1 + 1050 Possible protein-tyrosine-phosphatase (EC 3.1.3.48) - none -
fig|6666666.230106.peg.1218 CDS DS362239.1 149107 150963 1 + 1857 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.230106.peg.1219 CDS DS362239.1 151638 151150 -3 - 489 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.230106.peg.1220 CDS DS362239.1 151779 152705 3 + 927 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.230106.peg.1221 CDS DS362239.1 152901 153467 3 + 567 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.230106.peg.1222 CDS DS362239.1 153681 155240 3 + 1560 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.230106.peg.1223 CDS DS362239.1 157417 155279 -1 - 2139 FIG00936757: hypothetical protein - none -
fig|6666666.230106.peg.1224 CDS DS362239.1 158804 157434 -2 - 1371 FIG00761799: membrane protein - none -
fig|6666666.230106.peg.1225 CDS DS362239.1 159492 158821 -3 - 672 DNA-damage-inducible protein D - none -
fig|6666666.230106.peg.1226 CDS DS362239.1 161154 159670 -3 - 1485 Polysaccharide biosynthesis protein - none -
fig|6666666.230106.peg.1227 CDS DS362239.1 162403 161225 -1 - 1179 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.230106.peg.1228 CDS DS362239.1 164030 162504 -2 - 1527 FIG00411211: hypothetical protein - none -
fig|6666666.230106.peg.1229 CDS DS362239.1 165637 164066 -1 - 1572 RagB/SusD domain protein - none -
fig|6666666.230106.peg.1230 CDS DS362239.1 168531 165646 -3 - 2886 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.1231 CDS DS362239.1 169657 168653 -1 - 1005 FIG00761799: membrane protein - none -
fig|6666666.230106.peg.1232 CDS DS362239.1 170604 169669 -3 - 936 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.230106.peg.1233 CDS DS362239.1 171570 170644 -3 - 927 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.230106.peg.1234 CDS DS362239.1 173298 171787 -3 - 1512 FIG00413071: hypothetical protein - none -
fig|6666666.230106.peg.1235 CDS DS362239.1 174255 173488 -3 - 768 probable DNA alkylation repair enzyme - none -
fig|6666666.230106.peg.1236 CDS DS362239.1 174387 175391 3 + 1005 Aminopeptidase - none -
fig|6666666.230106.peg.1237 CDS DS362239.1 175417 176649 1 + 1233 Spore maturation protein A-like protein Spore Core Dehydration
fig|6666666.230106.peg.1238 CDS DS362239.1 176717 177130 2 + 414 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.230106.peg.1239 CDS DS362239.1 177738 177202 -3 - 537 FIG00405963: hypothetical protein - none -
fig|6666666.230106.peg.1240 CDS DS362239.1 178953 177829 -3 - 1125 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.1241 CDS DS362239.1 181025 178995 -2 - 2031 FIG00938305: hypothetical protein - none -
fig|6666666.230106.peg.1242 CDS DS362239.1 181327 181058 -1 - 270 Alfa-L-rhamnosidase (EC 3.2.1.40) - none -
fig|6666666.230106.peg.1243 CDS DS362239.1 183684 181327 -3 - 2358 Alfa-L-rhamnosidase (EC 3.2.1.40) - none -
fig|6666666.230106.peg.1244 CDS DS362239.1 184796 183789 -2 - 1008 Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99) L-Arabinose utilization
fig|6666666.230106.peg.1245 CDS DS362239.1 185792 184824 -2 - 969 endo-1,4-beta-xylanase - none -
fig|6666666.230106.peg.1246 CDS DS362239.1 186743 185796 -2 - 948 Endo-1,4-beta-xylanase D - none -
fig|6666666.230106.peg.1247 CDS DS362239.1 189651 187009 -3 - 2643 Endo-1,4-beta-xylanase D - none -
fig|6666666.230106.peg.1248 CDS DS362239.1 191313 189736 -3 - 1578 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.1249 CDS DS362239.1 194347 191336 -1 - 3012 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.1250 CDS DS362239.1 198601 194648 -1 - 3954 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.1251 CDS DS362239.1 200494 198707 -1 - 1788 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.1252 CDS DS362239.1 200793 200650 -3 - 144 hypothetical protein - none -
fig|6666666.230106.peg.1253 CDS DS362239.1 202346 200856 -2 - 1491 FIG00408294: hypothetical protein - none -
fig|6666666.230106.peg.1254 CDS DS362239.1 205527 202366 -3 - 3162 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.1255 CDS DS362239.1 205823 207697 2 + 1875 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.230106.peg.1256 CDS DS362239.1 207754 208278 1 + 525 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.230106.peg.1257 CDS DS362239.1 208401 210221 3 + 1821 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.230106.peg.1258 CDS DS362239.1 210311 210754 2 + 444 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.230106.peg.1259 CDS DS362239.1 210754 211092 1 + 339 FIG00649439: hypothetical protein - none -
fig|6666666.230106.peg.1260 CDS DS362239.1 211079 211981 2 + 903 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.230106.peg.1261 CDS DS362239.1 213041 212067 -2 - 975 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.230106.peg.1262 CDS DS362239.1 213129 215984 3 + 2856 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.230106.peg.1263 CDS DS362239.1 216263 216655 2 + 393 FIG00405367: hypothetical protein - none -
fig|6666666.230106.peg.1264 CDS DS362239.1 216789 217412 3 + 624 FIG00406942: hypothetical protein - none -
fig|6666666.230106.peg.1265 CDS DS362239.1 219299 217683 -2 - 1617 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230106.peg.1266 CDS DS362240.1 942 1178 3 + 237 hypothetical protein - none -
fig|6666666.230106.peg.1267 CDS DS362240.1 1545 3041 3 + 1497 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.230106.peg.1268 CDS DS362240.1 3084 4478 3 + 1395 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.230106.peg.1269 CDS DS362240.1 4588 5187 1 + 600 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.230106.peg.1270 CDS DS362240.1 5177 6718 2 + 1542 (R)-citramalate synthase (EC 2.3.1.182) Branched-Chain Amino Acid Biosynthesis
fig|6666666.230106.peg.1271 CDS DS362240.1 6731 6988 2 + 258 FIG00415981: hypothetical protein - none -
fig|6666666.230106.peg.1272 CDS DS362240.1 6978 8039 3 + 1062 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.230106.peg.1273 CDS DS362240.1 8361 8248 -3 - 114 hypothetical protein - none -
fig|6666666.230106.peg.1274 CDS DS362240.1 8416 9399 1 + 984 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.230106.peg.1275 CDS DS362240.1 9415 10266 1 + 852 TPR-repeat-containing protein - none -
fig|6666666.230106.peg.1276 CDS DS362240.1 12081 10270 -3 - 1812 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.230106.peg.1277 CDS DS362240.1 12363 12836 3 + 474 Transcriptional regulator, AraC/XylS family - none -
fig|6666666.230106.peg.1278 CDS DS362240.1 12938 14986 2 + 2049 Dipeptidyl-peptidase III (EC 3.4.14.4) - none -
fig|6666666.230106.peg.1279 CDS DS362240.1 14993 15667 2 + 675 Peptidase, M49 family - none -
fig|6666666.230106.peg.1280 CDS DS362240.1 15768 16283 3 + 516 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.230106.peg.1281 CDS DS362240.1 16280 17551 2 + 1272 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.230106.peg.1282 CDS DS362240.1 17669 18958 2 + 1290 Alpha-L-fucosidase (EC 3.2.1.51) - none -
fig|6666666.230106.peg.1283 CDS DS362240.1 19100 19795 2 + 696 FIG00897182: hypothetical protein - none -
fig|6666666.230106.peg.1284 CDS DS362240.1 21064 19901 -1 - 1164 hypothetical protein - none -
fig|6666666.230106.peg.1285 CDS DS362240.1 21298 21140 -1 - 159 hypothetical protein - none -
fig|6666666.230106.peg.1286 CDS DS362240.1 21332 22558 2 + 1227 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.230106.peg.1287 CDS DS362240.1 22594 22863 1 + 270 FIG00411025: hypothetical protein - none -
fig|6666666.230106.peg.1288 CDS DS362240.1 22912 23673 1 + 762 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.230106.peg.1289 CDS DS362240.1 24497 23643 -2 - 855 FIG00406457: hypothetical protein - none -
fig|6666666.230106.peg.1290 CDS DS362240.1 24681 24953 3 + 273 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.230106.peg.1291 CDS DS362240.1 24991 26628 1 + 1638 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.230106.peg.1292 CDS DS362240.1 26883 27101 3 + 219 hypothetical protein - none -
fig|6666666.230106.peg.1293 CDS DS362240.1 27257 28276 2 + 1020 Low-specificity L-threonine aldolase (EC 4.1.2.48) - none -
fig|6666666.230106.peg.1294 CDS DS362240.1 30958 28448 -1 - 2511 Endoglucanase D precursor (EC 3.2.1.4) - none -
fig|6666666.230106.peg.1295 CDS DS362240.1 31267 32235 1 + 969 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.230106.peg.1296 CDS DS362240.1 32235 32546 3 + 312 FIG00403615: hypothetical protein - none -
fig|6666666.230106.peg.1297 CDS DS362240.1 33950 32736 -2 - 1215 transposase - none -
fig|6666666.230106.peg.1298 CDS DS362240.1 35782 34076 -1 - 1707 Acyl-CoA dehydrogenase (EC 1.3.8.7) - none -
fig|6666666.230106.peg.1299 CDS DS362240.1 36614 35793 -2 - 822 Regulatory sensor-transducer, BlaR1/MecR1 family / TonB family protein - none -
fig|6666666.230106.peg.1300 CDS DS362240.1 37648 36629 -1 - 1020 Electron transfer flavoprotein, alpha subunit - none -
fig|6666666.230106.peg.1301 CDS DS362240.1 38546 37653 -2 - 894 Electron transfer flavoprotein, beta subunit - none -
fig|6666666.230106.peg.1302 CDS DS362240.1 38883 40643 3 + 1761 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.230106.peg.1303 CDS DS362240.1 41890 40688 -1 - 1203 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.230106.peg.1304 CDS DS362240.1 41983 42834 1 + 852 Patatin-like phospholipase - none -
fig|6666666.230106.peg.1305 CDS DS362240.1 43093 46164 1 + 3072 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.1306 CDS DS362240.1 46184 47968 2 + 1785 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.1307 CDS DS362240.1 48042 50177 3 + 2136 Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) - none -
fig|6666666.230106.peg.1308 CDS DS362240.1 50177 51661 2 + 1485 Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) - none -
fig|6666666.230106.peg.1309 CDS DS362240.1 51658 53730 1 + 2073 hypothetical protein - none -
fig|6666666.230106.peg.1310 CDS DS362240.1 53735 55915 2 + 2181 Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) - none -
fig|6666666.230106.peg.1311 CDS DS362240.1 56157 57863 3 + 1707 Levanase (EC 3.2.1.65) - none -
fig|6666666.230106.peg.1312 CDS DS362240.1 57882 59048 3 + 1167 Predicted glucose transporter in maltodextrin utilization gene cluster Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.1313 CDS DS362240.1 59304 60191 3 + 888 Fructokinase (EC 2.7.1.4) Sucrose utilization
fig|6666666.230106.peg.1314 CDS DS362240.1 60257 63022 2 + 2766 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.1315 CDS DS362240.1 63273 63085 -3 - 189 FIG00416554: hypothetical protein - none -
fig|6666666.230106.peg.1316 CDS DS362240.1 66921 63364 -3 - 3558 Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) Methionine Degradation;
Pyruvate:ferredoxin oxidoreductase
fig|6666666.230106.peg.1317 CDS DS362240.1 68141 66963 -2 - 1179 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.230106.peg.1318 CDS DS362240.1 68270 69478 2 + 1209 FIG00403009: hypothetical protein - none -
fig|6666666.230106.peg.1319 CDS DS362240.1 70970 69462 -2 - 1509 COG1649 predicted glycoside hydrolase - none -
fig|6666666.230106.peg.1320 CDS DS362240.1 71042 72472 2 + 1431 Carbon starvation protein A Carbon Starvation
fig|6666666.230106.peg.1321 CDS DS362240.1 72472 72693 1 + 222 FIG00404951: hypothetical protein - none -
fig|6666666.230106.peg.1322 CDS DS362240.1 72719 73207 2 + 489 FIG00403605: hypothetical protein - none -
fig|6666666.230106.peg.1323 CDS DS362240.1 73639 73331 -1 - 309 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.230106.peg.1324 CDS DS362240.1 74019 73648 -3 - 372 FIG00417077: hypothetical protein - none -
fig|6666666.230106.peg.1325 CDS DS362240.1 74158 75336 1 + 1179 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.230106.peg.1326 CDS DS362240.1 78220 75437 -1 - 2784 Excinuclease ABC subunit A paralog in greater Bacteroides group DNA repair, UvrABC system
fig|6666666.230106.peg.1327 CDS DS362240.1 78405 80354 3 + 1950 two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.1328 CDS DS362240.1 80395 81906 1 + 1512 COG1649 predicted glycoside hydrolase - none -
fig|6666666.230106.peg.1329 CDS DS362240.1 82528 81959 -1 - 570 Chromate transport protein - none -
fig|6666666.230106.peg.1330 CDS DS362240.1 83134 82592 -1 - 543 Chromate transport protein - none -
fig|6666666.230106.peg.1331 CDS DS362240.1 87249 83152 -3 - 4098 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.1332 CDS DS362240.1 91070 87366 -2 - 3705 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.230106.peg.1333 CDS DS362240.1 91122 91244 3 + 123 hypothetical protein - none -
fig|6666666.230106.peg.1334 CDS DS362240.1 93511 91259 -1 - 2253 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230106.peg.1335 CDS DS362240.1 93760 94305 1 + 546 Transporter, LysE family - none -
fig|6666666.230106.peg.1336 CDS DS362240.1 94343 94888 2 + 546 FIG00937849: hypothetical protein - none -
fig|6666666.230106.peg.1337 CDS DS362240.1 94949 95803 2 + 855 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230106.peg.1338 CDS DS362240.1 95825 97399 2 + 1575 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.230106.peg.1339 CDS DS362240.1 97621 97755 1 + 135 Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal - none -
fig|6666666.230106.peg.1340 CDS DS362240.1 98206 98697 1 + 492 FIG00407890: hypothetical protein - none -
fig|6666666.230106.peg.1341 CDS DS362240.1 98890 99147 1 + 258 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230106.peg.1342 CDS DS362240.1 99187 101025 1 + 1839 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230106.peg.1343 CDS DS362240.1 101025 102260 3 + 1236 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230106.peg.1344 CDS DS362240.1 103624 102350 -1 - 1275 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.230106.peg.1345 CDS DS362240.1 106688 103659 -2 - 3030 AcrB/D/F family transporter - none -
fig|6666666.230106.peg.1346 CDS DS362240.1 107791 106739 -1 - 1053 RND efflux system membrane fusion protein - none -
fig|6666666.230106.peg.1347 CDS DS362240.1 110267 107949 -2 - 2319 Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis;
Trehalose Uptake and Utilization
fig|6666666.230106.peg.1348 CDS DS362240.1 111859 110492 -1 - 1368 Sugar transporter - none -
fig|6666666.230106.peg.1349 CDS DS362240.1 112883 111879 -2 - 1005 Maltose operon transcriptional repressor MalR, LacI family Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.1350 CDS DS362240.1 113099 114274 2 + 1176 arabinogalactan endo-1,4-beta-galactosidase - none -
fig|6666666.230106.peg.1351 CDS DS362240.1 114303 116780 3 + 2478 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.1352 CDS DS362240.1 117560 120502 2 + 2943 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.1353 CDS DS362240.1 120514 122133 1 + 1620 SusD, outer membrane protein Cellulosome
fig|6666666.230106.peg.1354 CDS DS362240.1 122158 123768 1 + 1611 FIG00411445: hypothetical protein - none -
fig|6666666.230106.peg.1355 CDS DS362240.1 123850 125175 1 + 1326 Sucrose phosphorylase (EC 2.4.1.7) Sucrose utilization
fig|6666666.230106.peg.1356 CDS DS362240.1 125352 127931 3 + 2580 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) Cellulosome
fig|6666666.230106.peg.1357 CDS DS362240.1 128969 127944 -2 - 1026 FIG00405090: hypothetical protein - none -
fig|6666666.230106.peg.1358 CDS DS362240.1 129030 130310 3 + 1281 Bacillus cereus group-specific protein, uncharacterized - none -
fig|6666666.230106.peg.1359 CDS DS362240.1 130404 130940 3 + 537 Nitroreductase family protein - none -
fig|6666666.230106.peg.1360 CDS DS362240.1 130943 131278 2 + 336 FIG00407938: hypothetical protein - none -
fig|6666666.230106.peg.1361 CDS DS362240.1 131283 132080 3 + 798 FIG137884: hypothetical protein Coenzyme A Biosynthesis cluster
fig|6666666.230106.peg.1362 CDS DS362240.1 132160 132690 1 + 531 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) - none -
fig|6666666.230106.peg.1363 CDS DS362240.1 132734 133318 2 + 585 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.230106.peg.1364 CDS DS362240.1 135507 133315 -3 - 2193 TPR domain protein - none -
fig|6666666.230106.peg.1365 CDS DS362240.1 136656 135589 -3 - 1068 FIG00405727: hypothetical protein - none -
fig|6666666.230106.peg.1366 CDS DS362240.1 137945 136689 -2 - 1257 Phosphoglycerate kinase (EC 2.7.2.3) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.230106.peg.1367 CDS DS362240.1 138711 138037 -3 - 675 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.230106.peg.1368 CDS DS362240.1 139904 138708 -2 - 1197 Major facilitator family transporter - none -
fig|6666666.230106.peg.1369 CDS DS362240.1 141045 140011 -3 - 1035 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.230106.peg.1370 CDS DS362240.1 141105 141239 3 + 135 hypothetical protein - none -
fig|6666666.230106.peg.1371 CDS DS362240.1 141450 144044 3 + 2595 FIG00938541: hypothetical protein - none -
fig|6666666.230106.peg.1372 CDS DS362240.1 144088 147381 1 + 3294 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.1373 CDS DS362240.1 147401 148738 2 + 1338 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.1374 CDS DS362240.1 149063 150052 2 + 990 Fosmidomycin resistance protein - none -
fig|6666666.230106.peg.1375 CDS DS362240.1 150902 150123 -2 - 780 Eukaryotic-type low-affinity urea transporter - none -
fig|6666666.230106.peg.1376 CDS DS362240.1 151174 151479 1 + 306 FIG00412493: hypothetical protein - none -
fig|6666666.230106.peg.1377 CDS DS362240.1 151476 152045 3 + 570 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.230106.peg.1378 CDS DS362240.1 152080 154077 1 + 1998 Glycogen debranching enzyme (EC 3.2.1.-) / Pullulanase (EC 3.2.1.41) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.230106.peg.1379 CDS DS362240.1 154085 155560 2 + 1476 Putative molybdenum transport ATP-binding protein modF - none -
fig|6666666.230106.peg.1380 CDS DS362240.1 155664 156320 3 + 657 Transaldolase (EC 2.2.1.2) Pentose phosphate pathway
fig|6666666.230106.peg.1381 CDS DS362240.1 156514 158334 1 + 1821 putative sulfatase - none -
fig|6666666.230106.peg.1382 CDS DS362240.1 158350 159015 1 + 666 putative membrane-associated phospholipid phosphatase - none -
fig|6666666.230106.peg.1383 CDS DS362240.1 161623 159026 -1 - 2598 FIG00898317: hypothetical protein - none -
fig|6666666.230106.peg.1384 CDS DS362240.1 162509 161643 -2 - 867 FIG00898464: hypothetical protein - none -
fig|6666666.230106.peg.1385 CDS DS362240.1 162708 164162 3 + 1455 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.230106.peg.1386 CDS DS362240.1 164201 164884 2 + 684 Transcriptional regulatory protein rprY - none -
fig|6666666.230106.peg.1387 CDS DS362240.1 164943 166112 3 + 1170 Small-conductance mechanosensitive channel - none -
fig|6666666.230106.peg.1388 CDS DS362240.1 167167 166109 -1 - 1059 FIG00897204: hypothetical protein - none -
fig|6666666.230106.peg.1389 CDS DS362240.1 168664 167207 -1 - 1458 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.230106.peg.1390 CDS DS362240.1 168897 169136 3 + 240 FIG00415025: hypothetical protein - none -
fig|6666666.230106.peg.1391 CDS DS362240.1 169162 169764 1 + 603 Outer membrane protein H precursor Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.230106.peg.1392 CDS DS362240.1 170672 169902 -2 - 771 Cytoplasmic copper homeostasis protein cutC - none -
fig|6666666.230106.peg.1393 CDS DS362240.1 172296 170758 -3 - 1539 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) CBSS-226186.1.peg.4416;
Purine conversions
fig|6666666.230106.peg.1394 CDS DS362240.1 172712 172422 -2 - 291 Cell division ZapA family protein CBSS-226186.1.peg.4416
fig|6666666.230106.peg.1395 CDS DS362240.1 173041 172727 -1 - 315 FIG034863: hypothetical protein CBSS-226186.1.peg.4416
fig|6666666.230106.peg.1396 CDS DS362240.1 173596 173946 1 + 351 hypothetical protein - none -
fig|6666666.230106.peg.1397 CDS DS362240.1 173959 174543 1 + 585 membrane protein, putative - none -
fig|6666666.230106.peg.1398 CDS DS362240.1 174560 174850 2 + 291 Transcriptional regulators, marR/emrR family - none -
fig|6666666.230106.peg.1399 CDS DS362240.1 175009 175587 1 + 579 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.230106.peg.1400 CDS DS362240.1 176083 175724 -1 - 360 Hypothetical protein DUF454 - none -
fig|6666666.230106.peg.1401 CDS DS362240.1 176119 176991 1 + 873 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230106.peg.1402 CDS DS362240.1 177007 177840 1 + 834 hypothetical protein - none -
fig|6666666.230106.peg.1403 CDS DS362240.1 177967 178278 1 + 312 Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230106.peg.1404 CDS DS362240.1 178265 178810 2 + 546 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230106.peg.1405 CDS DS362240.1 179591 179016 -2 - 576 G:T/U mismatch-specific uracil/thymine DNA-glycosylase DNA repair, bacterial;
Uracil-DNA glycosylase
fig|6666666.230106.peg.1406 CDS DS362240.1 181742 179646 -2 - 2097 Lysine 2,3-aminomutase (EC 5.4.3.2) - none -
fig|6666666.230106.peg.1407 CDS DS362240.1 182532 181906 -3 - 627 FIG00404554: hypothetical protein - none -
fig|6666666.230106.peg.1408 CDS DS362240.1 184007 182619 -2 - 1389 Amino acid carrier protein - none -
fig|6666666.230106.peg.1409 CDS DS362240.1 184937 184230 -2 - 708 putative ATP-dependent DNA helicase - none -
fig|6666666.230106.peg.1410 CDS DS362240.1 185021 185197 2 + 177 FIG00404335: hypothetical protein - none -
fig|6666666.230106.peg.1411 CDS DS362240.1 185250 186557 3 + 1308 Biotin synthase related domain containing protein - none -
fig|6666666.230106.peg.1412 CDS DS362240.1 186554 187327 2 + 774 Domain often clustered or fused with uracil-DNA glycosylase Uracil-DNA glycosylase
fig|6666666.230106.peg.1413 CDS DS362240.1 188005 187334 -1 - 672 Mg(2+) transport ATPase protein C Magnesium transport
fig|6666666.230106.peg.1414 CDS DS362240.1 189008 188028 -2 - 981 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.230106.peg.1415 CDS DS362240.1 189776 189051 -2 - 726 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.230106.peg.1416 CDS DS362240.1 190199 189789 -2 - 411 FIG004064: hypothetical protein - none -
fig|6666666.230106.peg.1417 CDS DS362240.1 192094 190223 -1 - 1872 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.1418 CDS DS362240.1 192516 192355 -3 - 162 hypothetical protein - none -
fig|6666666.230106.peg.1419 CDS DS362240.1 192469 193053 1 + 585 lipase/acylhydrolase family protein - none -
fig|6666666.230106.peg.1420 CDS DS362240.1 193076 193540 2 + 465 MaoC family protein - none -
fig|6666666.230106.peg.1421 CDS DS362240.1 194051 193695 -2 - 357 FIG00404860: hypothetical protein - none -
fig|6666666.230106.peg.1422 CDS DS362240.1 194332 194054 -1 - 279 Zinc finger domain-containing protein - none -
fig|6666666.230106.peg.1423 CDS DS362240.1 194827 194369 -1 - 459 IAA acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.230106.peg.1424 CDS DS362240.1 194973 195455 3 + 483 FIG00414117: hypothetical protein - none -
fig|6666666.230106.peg.1425 CDS DS362240.1 195514 195831 1 + 318 putative methylated-DNA methyltransferase - none -
fig|6666666.230106.peg.1426 CDS DS362240.1 195836 196678 2 + 843 Endonuclease IV (EC 3.1.21.2) DNA repair, bacterial
fig|6666666.230106.peg.1427 CDS DS362240.1 197072 196683 -2 - 390 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation;
Ribosome biogenesis bacterial
fig|6666666.230106.peg.1428 CDS DS362240.1 197555 197085 -2 - 471 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.230106.peg.1429 CDS DS362240.1 199222 197594 -1 - 1629 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.230106.peg.1430 CDS DS362240.1 199674 199946 3 + 273 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.1431 CDS DS362240.1 199930 201270 1 + 1341 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.1432 CDS DS362240.1 201329 202186 2 + 858 FIG00412737: hypothetical protein - none -
fig|6666666.230106.peg.1433 CDS DS362240.1 202927 202277 -1 - 651 Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6) Protein degradation
fig|6666666.230106.peg.1434 CDS DS362240.1 205172 202932 -2 - 2241 ATP-dependent Clp protease ATP-binding subunit ClpA ClpAS cluster;
Proteolysis in bacteria, ATP-dependent;
Ribosome recycling related cluster
fig|6666666.230106.peg.1435 CDS DS362240.1 205496 205185 -2 - 312 ATP-dependent Clp protease adaptor protein ClpS ClpAS cluster;
Proteolysis in bacteria, ATP-dependent
fig|6666666.230106.peg.1436 CDS DS362240.1 206218 205529 -1 - 690 FIG00405132: hypothetical protein - none -
fig|6666666.230106.peg.1437 CDS DS362240.1 207118 206261 -1 - 858 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230106.peg.1438 CDS DS362240.1 207279 207133 -3 - 147 hypothetical protein - none -
fig|6666666.230106.peg.1439 CDS DS362240.1 207580 207350 -1 - 231 hypothetical protein - none -
fig|6666666.230106.peg.1440 CDS DS362240.1 208677 207577 -3 - 1101 hypothetical protein - none -
fig|6666666.230106.peg.1441 CDS DS362240.1 209868 208795 -3 - 1074 FIG074102: hypothetical protein - none -
fig|6666666.230106.peg.1442 CDS DS362240.1 210829 210395 -1 - 435 hypothetical protein - none -
fig|6666666.230106.peg.1443 CDS DS362240.1 211454 210990 -2 - 465 FIG00405194: hypothetical protein - none -
fig|6666666.230106.peg.1444 CDS DS362240.1 212806 211514 -1 - 1293 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.230106.peg.1445 CDS DS362240.1 212901 213713 3 + 813 Acetyl esterase - none -
fig|6666666.230106.peg.1446 CDS DS362240.1 214627 213722 -1 - 906 FIG00405844: hypothetical protein - none -
fig|6666666.230106.peg.1447 CDS DS362240.1 216023 214641 -2 - 1383 Carboxyl-terminal protease - none -
fig|6666666.230106.peg.1448 CDS DS362240.1 216247 217533 1 + 1287 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.230106.peg.1449 CDS DS362240.1 217556 218620 2 + 1065 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.230106.peg.1450 CDS DS362240.1 219273 218611 -3 - 663 DNA-binding response regulator, LuxR family - none -
fig|6666666.230106.peg.1451 CDS DS362240.1 219954 219364 -3 - 591 FIG00403648: hypothetical protein - none -
fig|6666666.230106.peg.1452 CDS DS362240.1 221457 220021 -3 - 1437 Na(+)/H(+) antiporter - none -
fig|6666666.230106.peg.1453 CDS DS362240.1 222801 221626 -3 - 1176 Putative transport protein - none -
fig|6666666.230106.peg.1454 CDS DS362240.1 222940 223053 1 + 114 hypothetical protein - none -
fig|6666666.230106.peg.1455 CDS DS362240.1 223209 224066 3 + 858 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.1456 CDS DS362241.1 1043 78 -2 - 966 FIG00897664: hypothetical protein - none -
fig|6666666.230106.peg.1457 CDS DS362241.1 2175 1069 -3 - 1107 FIG00896523: hypothetical protein - none -
fig|6666666.230106.peg.1458 CDS DS362241.1 3711 2239 -3 - 1473 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) Cysteine Biosynthesis
fig|6666666.230106.peg.1459 CDS DS362241.1 4663 3752 -1 - 912 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) Cysteine Biosynthesis
fig|6666666.230106.peg.1460 CDS DS362241.1 5275 4670 -1 - 606 Adenylylsulfate kinase (EC 2.7.1.25) Cysteine Biosynthesis
fig|6666666.230106.peg.1461 CDS DS362241.1 6851 5298 -2 - 1554 Sulfate permease Cysteine Biosynthesis
fig|6666666.230106.peg.1462 CDS DS362241.1 7683 6859 -3 - 825 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.230106.peg.1463 CDS DS362241.1 8719 8219 -1 - 501 FIG00936940: hypothetical protein - none -
fig|6666666.230106.peg.1464 CDS DS362241.1 9172 8768 -1 - 405 FIG00407519: hypothetical protein - none -
fig|6666666.230106.peg.1465 CDS DS362241.1 9347 10624 2 + 1278 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.230106.peg.1466 CDS DS362241.1 10718 10927 2 + 210 FIG00403582: hypothetical protein - none -
fig|6666666.230106.peg.1467 CDS DS362241.1 10947 11300 3 + 354 FIG00405237: hypothetical protein - none -
fig|6666666.230106.peg.1468 CDS DS362241.1 11313 11573 3 + 261 FIG00402836: hypothetical protein - none -
fig|6666666.230106.peg.1469 CDS DS362241.1 12620 11649 -2 - 972 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.230106.peg.1470 CDS DS362241.1 12813 13916 3 + 1104 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.1471 CDS DS362241.1 14004 15269 3 + 1266 Predicted glucose transporter in maltodextrin utilization gene cluster Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.1472 CDS DS362241.1 15319 16473 1 + 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.230106.peg.1473 CDS DS362241.1 16593 16480 -3 - 114 hypothetical protein - none -
fig|6666666.230106.peg.1474 CDS DS362241.1 16740 17879 3 + 1140 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.1475 CDS DS362241.1 17907 19601 3 + 1695 Predicted sodium-dependent galactose transporter - none -
fig|6666666.230106.peg.1476 CDS DS362241.1 19661 20338 2 + 678 Hypothetical Nudix-like regulator - none -
fig|6666666.230106.peg.1477 CDS DS362241.1 20381 21067 2 + 687 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-Arabinose utilization
fig|6666666.230106.peg.1478 CDS DS362241.1 21106 22614 1 + 1509 L-arabinose isomerase (EC 5.3.1.4) L-Arabinose utilization
fig|6666666.230106.peg.1479 CDS DS362241.1 22739 24337 2 + 1599 Ribulokinase (EC 2.7.1.16) L-Arabinose utilization
fig|6666666.230106.peg.1480 CDS DS362241.1 24361 25905 1 + 1545 Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55) L-Arabinose utilization
fig|6666666.230106.peg.1481 CDS DS362241.1 26096 28105 2 + 2010 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.230106.peg.1482 CDS DS362241.1 28197 28634 3 + 438 Ribose 5-phosphate isomerase B (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.230106.peg.1483 CDS DS362241.1 28810 29085 1 + 276 FIG00403100: hypothetical protein - none -
fig|6666666.230106.peg.1484 CDS DS362241.1 29102 29329 2 + 228 2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3) - none -
fig|6666666.230106.peg.1485 CDS DS362241.1 29349 30434 3 + 1086 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) - none -
fig|6666666.230106.peg.1486 CDS DS362241.1 30431 30604 2 + 174 FIG00404525: hypothetical protein - none -
fig|6666666.230106.peg.1487 CDS DS362241.1 30616 31377 1 + 762 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) - none -
fig|6666666.230106.peg.1488 CDS DS362241.1 31400 31945 2 + 546 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) - none -
fig|6666666.230106.peg.1489 CDS DS362241.1 32281 34410 1 + 2130 FIG00936866: hypothetical protein - none -
fig|6666666.230106.peg.1490 CDS DS362241.1 34422 35252 3 + 831 Transglycosylase - none -
fig|6666666.230106.peg.1491 CDS DS362241.1 37451 35526 -2 - 1926 NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.230106.peg.1492 CDS DS362241.1 37748 38182 2 + 435 Peroxide stress regulator; Ferric uptake regulation protein; Fe2+/Zn2+ uptake regulation proteins Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.230106.peg.1493 CDS DS362241.1 38209 38766 1 + 558 Rubrerythrin Oxidative stress;
Rubrerythrin
fig|6666666.230106.peg.1494 CDS DS362241.1 38891 39415 2 + 525 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.1495 CDS DS362241.1 39412 39870 1 + 459 FIG00406179: hypothetical protein - none -
fig|6666666.230106.peg.1496 CDS DS362241.1 39883 40353 1 + 471 hypothetical protein - none -
fig|6666666.230106.peg.1497 CDS DS362241.1 40374 41279 3 + 906 FIG00896412: hypothetical protein - none -
fig|6666666.230106.peg.1498 CDS DS362241.1 43049 41391 -2 - 1659 FIG00937714: hypothetical protein - none -
fig|6666666.230106.peg.1499 CDS DS362241.1 44468 43086 -2 - 1383 Vitellogenin II precursor - none -
fig|6666666.230106.peg.1500 CDS DS362241.1 44633 44499 -2 - 135 hypothetical protein - none -
fig|6666666.230106.peg.1501 CDS DS362241.1 44750 45592 2 + 843 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.230106.peg.1502 CDS DS362241.1 46519 45647 -1 - 873 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) (EC 3.2.1.17) - none -
fig|6666666.230106.peg.1503 CDS DS362241.1 48235 46589 -1 - 1647 Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90) Glycolysis and Gluconeogenesis
fig|6666666.230106.peg.1504 CDS DS362241.1 48687 48848 3 + 162 putative RNA-binding protein rbpA - none -
fig|6666666.230106.peg.1505 CDS DS362241.1 48928 49425 1 + 498 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.230106.peg.1506 CDS DS362241.1 50892 49516 -3 - 1377 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.1507 CDS DS362241.1 54020 50910 -2 - 3111 RND efflux system, inner membrane transporter CmeB Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.1508 CDS DS362241.1 55302 54028 -3 - 1275 RND efflux system, membrane fusion protein CmeA Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.1509 CDS DS362241.1 55606 55875 1 + 270 FIG00405699: hypothetical protein - none -
fig|6666666.230106.peg.1510 CDS DS362241.1 55877 56431 2 + 555 Acyltransferase family protein - none -
fig|6666666.230106.peg.1511 CDS DS362241.1 56454 57260 3 + 807 Possible hydrolase - none -
fig|6666666.230106.peg.1512 CDS DS362241.1 57933 57232 -3 - 702 PUTATIVE PERIPLASMIC PROTEIN - none -
fig|6666666.230106.peg.1513 CDS DS362241.1 58518 60422 3 + 1905 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Sialic Acid Metabolism
fig|6666666.230106.peg.1514 CDS DS362241.1 60592 61470 1 + 879 hypothetical protein-signal peptide and transmembrane prediction - none -
fig|6666666.230106.peg.1515 CDS DS362241.1 61619 64549 2 + 2931 Xanthan lyase - none -
fig|6666666.230106.peg.1516 CDS DS362241.1 64666 64980 1 + 315 FIG00937687: hypothetical protein - none -
fig|6666666.230106.peg.1517 CDS DS362241.1 64981 65199 1 + 219 FIG00404338: hypothetical protein - none -
fig|6666666.230106.peg.1518 CDS DS362241.1 65196 67034 3 + 1839 putative Fe-S oxidoreductase - none -
fig|6666666.230106.peg.1519 CDS DS362241.1 67070 67714 2 + 645 FIG00407628: hypothetical protein - none -
fig|6666666.230106.peg.1520 CDS DS362241.1 71123 67734 -2 - 3390 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.230106.peg.1521 CDS DS362241.1 71778 72533 3 + 756 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.230106.peg.1522 CDS DS362241.1 72578 73924 2 + 1347 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.230106.peg.1523 CDS DS362241.1 73958 74872 2 + 915 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Methionine Biosynthesis
fig|6666666.230106.peg.1524 CDS DS362241.1 75082 75567 1 + 486 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.1525 CDS DS362241.1 75572 76198 2 + 627 FIG00402738: hypothetical protein - none -
fig|6666666.230106.peg.1526 CDS DS362241.1 76186 77361 1 + 1176 putative phosphoesterase - none -
fig|6666666.230106.peg.1527 CDS DS362241.1 77411 78169 2 + 759 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230106.peg.1528 CDS DS362241.1 79002 78253 -3 - 750 FIG00937518: hypothetical protein - none -
fig|6666666.230106.peg.1529 CDS DS362241.1 79136 80371 2 + 1236 Putative arylsulfatase regulatory protein - none -
fig|6666666.230106.peg.1530 CDS DS362241.1 80424 82589 3 + 2166 FIG00403185: hypothetical protein - none -
fig|6666666.230106.peg.1531 CDS DS362241.1 82729 84888 1 + 2160 FIG00899111: hypothetical protein - none -
fig|6666666.230106.peg.1532 CDS DS362241.1 84918 85256 3 + 339 TRX family - none -
fig|6666666.230106.peg.1533 CDS DS362241.1 85284 85694 3 + 411 Thioredoxin CBSS-315749.4.peg.3658
fig|6666666.230106.peg.1534 CDS DS362241.1 86610 85768 -3 - 843 Histidinol-phosphatase (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.230106.peg.1535 CDS DS362241.1 88517 86655 -2 - 1863 COG0488: ATPase components of ABC transporters with duplicated ATPase domains - none -
fig|6666666.230106.peg.1536 CDS DS362241.1 89450 88608 -2 - 843 FIG00407332: hypothetical protein - none -
fig|6666666.230106.peg.1537 CDS DS362241.1 91593 89746 -3 - 1848 FIG00409833: hypothetical protein - none -
fig|6666666.230106.peg.1538 CDS DS362241.1 94824 91615 -3 - 3210 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.1539 CDS DS362241.1 95329 95538 1 + 210 hypothetical protein - none -
fig|6666666.230106.peg.1540 CDS DS362241.1 96834 95638 -3 - 1197 FIG00406664: hypothetical protein - none -
fig|6666666.230106.peg.1541 CDS DS362241.1 97122 97811 3 + 690 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.230106.peg.1542 CDS DS362241.1 97786 99579 1 + 1794 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.230106.peg.1543 CDS DS362241.1 100381 101754 1 + 1374 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.230106.peg.1544 CDS DS362241.1 102305 101760 -2 - 546 Siderophore (Surfactin) biosynthesis regulatory protein - none -
fig|6666666.230106.peg.1545 CDS DS362241.1 103768 102419 -1 - 1350 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.230106.peg.1546 CDS DS362241.1 104247 103792 -3 - 456 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.230106.peg.1547 CDS DS362241.1 105360 104320 -3 - 1041 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.230106.peg.1548 CDS DS362241.1 105518 105793 2 + 276 DNA-binding protein HU DNA structural proteins, bacterial
fig|6666666.230106.peg.1549 CDS DS362241.1 106029 107603 3 + 1575 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.230106.peg.1550 CDS DS362241.1 108856 107684 -1 - 1173 NADH-dependent butanol dehydrogenase A (EC 1.1.1.-) - none -
fig|6666666.230106.peg.1551 CDS DS362241.1 109797 108865 -3 - 933 FIG00939867: hypothetical protein - none -
fig|6666666.230106.peg.1552 CDS DS362241.1 110447 109794 -2 - 654 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230106.peg.1553 CDS DS362241.1 110931 110437 -3 - 495 FIG00403675: hypothetical protein - none -
fig|6666666.230106.peg.1554 CDS DS362241.1 111422 110949 -2 - 474 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.230106.peg.1555 CDS DS362241.1 112856 111561 -2 - 1296 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.230106.peg.1556 CDS DS362241.1 115495 112958 -1 - 2538 FIG00407069: hypothetical protein - none -
fig|6666666.230106.peg.1557 CDS DS362241.1 115684 117378 1 + 1695 putative transport protein - none -
fig|6666666.230106.peg.1558 CDS DS362241.1 117655 119289 1 + 1635 L-aspartate beta-decarboxylase (EC 4.1.1.12) - none -
fig|6666666.230106.peg.1559 CDS DS362241.1 120636 119323 -3 - 1314 Sensor histidine kinase - none -
fig|6666666.230106.peg.1560 CDS DS362241.1 121988 120627 -2 - 1362 Two-component system response regulator - none -
fig|6666666.230106.peg.1561 CDS DS362241.1 123619 122132 -1 - 1488 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.230106.peg.1562 CDS DS362241.1 123813 124325 3 + 513 Methylmalonyl-CoA epimerase (EC 5.1.99.1) Propionyl-CoA to Succinyl-CoA Module
fig|6666666.230106.peg.1563 CDS DS362241.1 124384 125937 1 + 1554 Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Propionyl-CoA to Succinyl-CoA Module
fig|6666666.230106.peg.1564 CDS DS362241.1 125969 126901 2 + 933 Membrane protein associated with methylmalonyl-CoA decarboxylase Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.230106.peg.1565 CDS DS362241.1 126925 127359 1 + 435 Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.230106.peg.1566 CDS DS362241.1 127361 128521 2 + 1161 Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Propionyl-CoA to Succinyl-CoA Module
fig|6666666.230106.peg.1567 CDS DS362241.1 128691 130043 3 + 1353 TPR-domain containing protein - none -
fig|6666666.230106.peg.1568 CDS DS362241.1 130214 132004 2 + 1791 Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135) Cellulosome
fig|6666666.230106.peg.1569 CDS DS362241.1 133443 132475 -3 - 969 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.230106.peg.1570 CDS DS362241.1 134775 133768 -3 - 1008 FIG00405867: hypothetical protein - none -
fig|6666666.230106.peg.1571 CDS DS362241.1 134964 135215 3 + 252 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent - none -
fig|6666666.230106.peg.1572 CDS DS362241.1 135393 136916 3 + 1524 FIG00409921: hypothetical protein - none -
fig|6666666.230106.peg.1573 CDS DS362241.1 138095 137007 -2 - 1089 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.230106.peg.1574 CDS DS362241.1 139350 138127 -3 - 1224 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.230106.peg.1575 CDS DS362241.1 140959 139547 -1 - 1413 Amidophosphoribosyltransferase (EC 2.4.2.14) Colicin V and Bacteriocin Production Cluster;
De Novo Purine Biosynthesis
fig|6666666.230106.peg.1576 CDS DS362241.1 141131 141937 2 + 807 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.1577 CDS DS362241.1 142882 141941 -1 - 942 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.230106.peg.1578 CDS DS362241.1 145242 143089 -3 - 2154 Alpha-glucosidase SusB (EC 3.2.1.20) Cellulosome
fig|6666666.230106.peg.1579 CDS DS362241.1 145607 145470 -2 - 138 FIG00416107: hypothetical protein - none -
fig|6666666.230106.peg.1580 CDS DS362241.1 145956 145612 -3 - 345 FIG00416107: hypothetical protein - none -
fig|6666666.230106.peg.1581 CDS DS362241.1 146682 147059 3 + 378 Protein crcB homolog - none -
fig|6666666.230106.peg.1582 CDS DS362241.1 147073 147741 1 + 669 Quinolone resistance protein - none -
fig|6666666.230106.peg.1583 CDS DS362241.1 147807 149096 3 + 1290 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.230106.peg.1584 CDS DS362241.1 151452 149200 -3 - 2253 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.1585 CDS DS362241.1 152744 151455 -2 - 1290 FIG00409141: hypothetical protein - none -
fig|6666666.230106.peg.1586 CDS DS362241.1 154194 152833 -3 - 1362 Beta-glucanase precursor (EC 3.2.1.73) - none -
fig|6666666.230106.peg.1587 CDS DS362241.1 155706 154333 -3 - 1374 FIG00412289: hypothetical protein - none -
fig|6666666.230106.peg.1588 CDS DS362241.1 157327 155738 -1 - 1590 RagB/SusD domain protein - none -
fig|6666666.230106.peg.1589 CDS DS362241.1 160549 157346 -1 - 3204 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.1590 CDS DS362241.1 163732 160841 -1 - 2892 FIG00417103: hypothetical protein - none -
fig|6666666.230106.peg.1591 CDS DS362241.1 164528 165037 2 + 510 FIG00896350: hypothetical protein - none -
fig|6666666.230106.peg.1592 CDS DS362241.1 165092 166045 2 + 954 Glycosyl transferase - none -
fig|6666666.230106.peg.1593 CDS DS362241.1 166141 166533 1 + 393 FIG00404794: hypothetical protein - none -
fig|6666666.230106.peg.1594 CDS DS362241.1 166502 167269 2 + 768 FIG00937024: hypothetical protein - none -
fig|6666666.230106.peg.1595 CDS DS362241.1 167382 167855 3 + 474 Integral membrane protein - none -
fig|6666666.230106.peg.1596 CDS DS362241.1 167882 168898 2 + 1017 Thiamin biosynthesis lipoprotein ApbE Iron-sulfur cluster assembly
fig|6666666.230106.peg.1597 CDS DS362241.1 169288 168920 -1 - 369 membrane protein, putative - none -
fig|6666666.230106.peg.1598 CDS DS362241.1 170059 169310 -1 - 750 tRNA(Cytosine32)-2-thiocytidine synthetase tRNA modification Bacteria
fig|6666666.230106.peg.1599 CDS DS362241.1 170225 171655 2 + 1431 FIG00898772: hypothetical protein - none -
fig|6666666.230106.peg.1600 CDS DS362241.1 171664 172134 1 + 471 FIG00898184: hypothetical protein - none -
fig|6666666.230106.peg.1601 CDS DS362241.1 172201 173187 1 + 987 DUF1432 domain-containing protein - none -
fig|6666666.230106.peg.1602 CDS DS362241.1 173281 174159 1 + 879 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions
fig|6666666.230106.peg.1603 CDS DS362241.1 174441 175835 3 + 1395 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.230106.peg.1604 CDS DS362241.1 176107 176985 1 + 879 putative transposase - none -
fig|6666666.230106.peg.1605 CDS DS362241.1 177205 178218 1 + 1014 Integrase - none -
fig|6666666.230106.peg.1606 CDS DS362241.1 178386 179159 3 + 774 putative protein involved in transposition - none -
fig|6666666.230106.peg.1607 CDS DS362241.1 179259 179633 3 + 375 Excisionase - none -
fig|6666666.230106.peg.1608 CDS DS362241.1 179636 180706 2 + 1071 hypothetical protein - none -
fig|6666666.230106.peg.1609 CDS DS362241.1 181021 181440 1 + 420 hypothetical protein - none -
fig|6666666.230106.peg.1610 CDS DS362241.1 181437 182648 3 + 1212 conserved hypothetical protein with relaxase/mobilization nuclease domain - none -
fig|6666666.230106.peg.1611 CDS DS362241.1 182653 183192 1 + 540 FIG00896676: hypothetical protein - none -
fig|6666666.230106.peg.1612 CDS DS362241.1 185013 183313 -3 - 1701 DNA-binding protein - none -
fig|6666666.230106.peg.1613 CDS DS362241.1 185141 185028 -2 - 114 hypothetical protein - none -
fig|6666666.230106.peg.1614 CDS DS362241.1 186931 185243 -1 - 1689 DNA-binding protein - none -
fig|6666666.230106.peg.1615 CDS DS362241.1 188805 186985 -3 - 1821 protein of unknown function DUF262 - none -
fig|6666666.230106.peg.1616 CDS DS362241.1 191759 188829 -2 - 2931 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.230106.peg.1617 CDS DS362241.1 192949 191792 -1 - 1158 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.230106.peg.1618 CDS DS362241.1 193871 192951 -2 - 921 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.230106.peg.1619 CDS DS362241.1 195122 193992 -2 - 1131 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.230106.peg.1620 CDS DS362241.1 196647 195115 -3 - 1533 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.230106.peg.1621 CDS DS362241.1 198146 196653 -2 - 1494 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.230106.peg.1622 CDS DS362241.1 199556 198183 -2 - 1374 archaeal ATPase, fused to C-terminal DUF234 domain - none -
fig|6666666.230106.peg.1623 CDS DS362241.1 199979 199674 -2 - 306 transcriptional regulator, putative - none -
fig|6666666.230106.peg.1624 CDS DS362241.1 200150 200031 -2 - 120 hypothetical protein - none -
fig|6666666.230106.peg.1625 CDS DS362241.1 201348 200716 -3 - 633 FIG00413360: hypothetical protein - none -
fig|6666666.230106.peg.1626 CDS DS362241.1 202411 201899 -1 - 513 hypothetical protein - none -
fig|6666666.230106.peg.1627 CDS DS362241.1 202861 202529 -1 - 333 hypothetical protein - none -
fig|6666666.230106.peg.1628 CDS DS362241.1 203634 202882 -3 - 753 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.230106.peg.1629 CDS DS362241.1 204524 204018 -2 - 507 hypothetical protein - none -
fig|6666666.230106.peg.1630 CDS DS362241.1 204975 204625 -3 - 351 hypothetical protein - none -
fig|6666666.230106.peg.1631 CDS DS362241.1 205663 205286 -1 - 378 hypothetical protein - none -
fig|6666666.230106.peg.1632 CDS DS362241.1 206829 207638 3 + 810 hypothetical protein - none -
fig|6666666.230106.peg.1633 CDS DS362241.1 207628 208701 1 + 1074 FIG00409689: hypothetical protein - none -
fig|6666666.230106.peg.1634 CDS DS362241.1 210168 209935 -3 - 234 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.1635 CDS DS362242.1 42 200 3 + 159 putative helicase - none -
fig|6666666.230106.peg.1636 CDS DS362242.1 284 820 2 + 537 FIG00898259: hypothetical protein - none -
fig|6666666.230106.peg.1637 CDS DS362242.1 824 1447 2 + 624 3@1-5@1 exonuclease domain protein - none -
fig|6666666.230106.peg.1638 CDS DS362242.1 1487 2668 2 + 1182 LSU m5C1962 methyltransferase RlmI RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.230106.peg.1639 CDS DS362242.1 2983 4239 1 + 1257 Nucleoside permease NupG - none -
fig|6666666.230106.peg.1640 CDS DS362242.1 4266 4850 3 + 585 FIG00402727: hypothetical protein - none -
fig|6666666.230106.peg.1641 CDS DS362242.1 4852 5550 1 + 699 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.230106.peg.1642 CDS DS362242.1 5573 7126 2 + 1554 FIG00405862: hypothetical protein - none -
fig|6666666.230106.peg.1643 CDS DS362242.1 7204 7812 1 + 609 ABC transporter ATP-binding protein - none -
fig|6666666.230106.peg.1644 CDS DS362242.1 7824 9029 3 + 1206 FIG00936964: hypothetical protein - none -
fig|6666666.230106.peg.1645 CDS DS362242.1 9065 11338 2 + 2274 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.1646 CDS DS362242.1 11424 13775 3 + 2352 Alpha-xylosidase (EC 3.2.1.-) Xylose utilization
fig|6666666.230106.peg.1647 CDS DS362242.1 15782 13923 -2 - 1860 Putative transport protein - none -
fig|6666666.230106.peg.1648 CDS DS362242.1 16136 15861 -2 - 276 FIG00413640: hypothetical protein - none -
fig|6666666.230106.peg.1649 CDS DS362242.1 16303 16596 1 + 294 FIG00417535: hypothetical protein - none -
fig|6666666.230106.peg.1650 CDS DS362242.1 17116 16766 -1 - 351 Transcriptional regulator, HxlR family - none -
fig|6666666.230106.peg.1651 CDS DS362242.1 17330 17992 2 + 663 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.230106.peg.1652 CDS DS362242.1 18704 17997 -2 - 708 FIG00415273: hypothetical protein - none -
fig|6666666.230106.peg.1653 CDS DS362242.1 18843 18688 -3 - 156 hypothetical protein - none -
fig|6666666.230106.peg.1654 CDS DS362242.1 18898 19755 1 + 858 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.1655 CDS DS362242.1 20098 20994 1 + 897 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.230106.peg.1656 CDS DS362242.1 22014 21001 -3 - 1014 putative N-acetylmuramoyl-L-alanine amidase - none -
fig|6666666.230106.peg.1657 CDS DS362242.1 22155 23435 3 + 1281 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.230106.peg.1658 CDS DS362242.1 26052 23548 -3 - 2505 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230106.peg.1659 CDS DS362242.1 26228 28516 2 + 2289 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230106.peg.1660 CDS DS362242.1 28880 30217 2 + 1338 NAD-specific glutamate dehydrogenase (EC 1.4.1.2) / NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.230106.peg.1661 CDS DS362242.1 30404 31585 2 + 1182 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.230106.peg.1662 CDS DS362242.1 33885 31681 -3 - 2205 Hyaluronidase - none -
fig|6666666.230106.peg.1663 CDS DS362242.1 34583 34005 -2 - 579 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.230106.peg.1664 CDS DS362242.1 34824 34606 -3 - 219 FIG00408312: hypothetical protein - none -
fig|6666666.230106.peg.1665 CDS DS362242.1 35402 34839 -2 - 564 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.230106.peg.1666 CDS DS362242.1 36311 35439 -2 - 873 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.230106.peg.1667 CDS DS362242.1 36415 37107 1 + 693 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE
fig|6666666.230106.peg.1668 CDS DS362242.1 37229 37849 2 + 621 FIG00936255: hypothetical protein - none -
fig|6666666.230106.peg.1669 CDS DS362242.1 37941 39248 3 + 1308 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.230106.peg.1670 CDS DS362242.1 39250 39786 1 + 537 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.230106.peg.1671 CDS DS362242.1 39783 40640 3 + 858 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.230106.peg.1672 CDS DS362242.1 40677 41822 3 + 1146 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.230106.peg.1673 CDS DS362242.1 41935 43266 1 + 1332 Membrane-associated zinc metalloprotease - none -
fig|6666666.230106.peg.1674 CDS DS362242.1 44298 43399 -3 - 900 Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230106.peg.1675 CDS DS362242.1 44494 45096 1 + 603 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.230106.peg.1676 CDS DS362242.1 45120 46112 3 + 993 FIG00411761: hypothetical protein - none -
fig|6666666.230106.peg.1677 CDS DS362242.1 47423 46308 -2 - 1116 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-)
fig|6666666.230106.peg.1678 CDS DS362242.1 48946 47609 -1 - 1338 NAD-specific glutamate dehydrogenase (EC 1.4.1.2) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.1679 CDS DS362242.1 51471 49324 -3 - 2148 Alpha-glucosidase SusB (EC 3.2.1.20) Cellulosome
fig|6666666.230106.peg.1680 CDS DS362242.1 52734 51475 -3 - 1260 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) Cellulosome
fig|6666666.230106.peg.1681 CDS DS362242.1 53096 52962 -2 - 135 hypothetical protein - none -
fig|6666666.230106.peg.1682 CDS DS362242.1 54301 53123 -1 - 1179 FIG00409457: hypothetical protein - none -
fig|6666666.230106.peg.1683 CDS DS362242.1 56126 54324 -2 - 1803 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.1684 CDS DS362242.1 59071 56150 -1 - 2922 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.1685 CDS DS362242.1 60876 59317 -3 - 1560 Regulatory protein SusR Cellulosome
fig|6666666.230106.peg.1686 CDS DS362242.1 61183 63678 1 + 2496 glycosyl hydrolase, family 9 - none -
fig|6666666.230106.peg.1687 CDS DS362242.1 63630 64517 3 + 888 40-residue YVTN beta-propeller repeat protein - none -
fig|6666666.230106.peg.1688 CDS DS362242.1 66664 65102 -1 - 1563 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.1689 CDS DS362242.1 69796 66686 -1 - 3111 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.1690 CDS DS362242.1 71759 70050 -2 - 1710 Chitinase (EC 3.2.1.14) - none -
fig|6666666.230106.peg.1691 CDS DS362242.1 73055 71790 -2 - 1266 Predicted glucose transporter in maltodextrin utilization gene cluster Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.1692 CDS DS362242.1 73852 73109 -1 - 744 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Sialic Acid Metabolism
fig|6666666.230106.peg.1693 CDS DS362242.1 74804 73863 -2 - 942 Sugar kinase and transcription regulator (EC 2.7.1.-) - none -
fig|6666666.230106.peg.1694 CDS DS362242.1 78867 74935 -3 - 3933 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.1695 CDS DS362242.1 78993 81962 3 + 2970 Phosphoenolpyruvate synthase / Pyruvate phosphate dikinase - none -
fig|6666666.230106.peg.1696 CDS DS362242.1 83034 81964 -3 - 1071 hypothetical protein - none -
fig|6666666.230106.peg.1697 CDS DS362242.1 83102 84013 2 + 912 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.230106.peg.1698 CDS DS362242.1 85202 84060 -2 - 1143 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230106.peg.1699 CDS DS362242.1 86162 85290 -2 - 873 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230106.peg.1700 CDS DS362242.1 87021 86527 -3 - 495 FIG00937838: hypothetical protein - none -
fig|6666666.230106.peg.1701 CDS DS362242.1 87113 89179 2 + 2067 Polyphosphate kinase (EC 2.7.4.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism;
Polyphosphate;
Purine conversions
fig|6666666.230106.peg.1702 CDS DS362242.1 89302 91560 1 + 2259 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.230106.peg.1703 CDS DS362242.1 93034 91604 -1 - 1431 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.230106.peg.1704 CDS DS362242.1 93164 93994 2 + 831 FIG00414501: hypothetical protein - none -
fig|6666666.230106.peg.1705 CDS DS362242.1 94464 94063 -3 - 402 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.1706 CDS DS362242.1 94551 96185 3 + 1635 ABC transporter ATP-binding protein uup - none -
fig|6666666.230106.peg.1707 CDS DS362242.1 96269 97645 2 + 1377 Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4); Mercuric ion reductase (EC 1.16.1.1); PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase Mercuric reductase;
Mercuric reductase;
Mercury resistance operon;
TCA Cycle
fig|6666666.230106.peg.1708 CDS DS362242.1 97708 98118 1 + 411 FIG00403272: hypothetical protein - none -
fig|6666666.230106.peg.1709 CDS DS362242.1 98238 99458 3 + 1221 Cation efflux system protein - none -
fig|6666666.230106.peg.1710 CDS DS362242.1 99627 102749 3 + 3123 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA Cobalt-zinc-cadmium resistance;
Cobalt-zinc-cadmium resistance
fig|6666666.230106.peg.1711 CDS DS362242.1 102742 103968 1 + 1227 FIG00406501: hypothetical protein - none -
fig|6666666.230106.peg.1712 CDS DS362242.1 105257 104025 -2 - 1233 proteinase inhibitor I4, serpin - none -
fig|6666666.230106.peg.1713 CDS DS362242.1 106992 105535 -3 - 1458 tRNA and rRNA cytosine-C5-methylases - none -
fig|6666666.230106.peg.1714 CDS DS362242.1 109506 107083 -3 - 2424 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.230106.peg.1715 CDS DS362242.1 109942 109571 -1 - 372 FIG00410804: hypothetical protein - none -
fig|6666666.230106.peg.1716 CDS DS362242.1 110168 110791 2 + 624 FIG00403458: hypothetical protein - none -
fig|6666666.230106.peg.1717 CDS DS362242.1 110884 111333 1 + 450 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.230106.peg.1718 CDS DS362242.1 111320 111646 2 + 327 FIG00403275: hypothetical protein - none -
fig|6666666.230106.peg.1719 CDS DS362242.1 111790 112938 1 + 1149 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230106.peg.1720 CDS DS362242.1 113013 113807 3 + 795 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis
fig|6666666.230106.peg.1721 CDS DS362242.1 113853 114341 3 + 489 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.230106.peg.1722 CDS DS362242.1 114820 114344 -1 - 477 Transcriptional regulator, AsnC family - none -
fig|6666666.230106.peg.1723 CDS DS362242.1 115060 116337 1 + 1278 Peptidase M64 - none -
fig|6666666.230106.peg.1724 CDS DS362242.1 116362 116898 1 + 537 FIG00897901: hypothetical protein - none -
fig|6666666.230106.peg.1725 CDS DS362242.1 117438 116974 -3 - 465 FIG00935740: hypothetical protein - none -
fig|6666666.230106.peg.1726 CDS DS362242.1 118028 117438 -2 - 591 Biopolymer transport exbD protein. - none -
fig|6666666.230106.peg.1727 CDS DS362242.1 118550 118065 -2 - 486 FIG00404263: hypothetical protein - none -
fig|6666666.230106.peg.1728 CDS DS362242.1 119359 118556 -1 - 804 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.230106.peg.1729 CDS DS362242.1 120466 119687 -1 - 780 Putative deoxyribonuclease YcfH YcfH
fig|6666666.230106.peg.1730 CDS DS362242.1 121176 120475 -3 - 702 FIG00403149: hypothetical protein - none -
fig|6666666.230106.peg.1731 CDS DS362242.1 122235 121195 -3 - 1041 Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.230106.peg.1732 CDS DS362242.1 122936 122250 -2 - 687 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.230106.peg.1733 CDS DS362242.1 123070 123894 1 + 825 Cytidylate kinase (EC 2.7.4.25) - none -
fig|6666666.230106.peg.1734 CDS DS362242.1 123902 124768 2 + 867 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.230106.peg.1735 CDS DS362242.1 124908 125888 3 + 981 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.230106.peg.1736 CDS DS362242.1 126752 125949 -2 - 804 retinol dehydrogenase 13 (all-trans and 9-cis) - none -
fig|6666666.230106.peg.1737 CDS DS362242.1 128048 126825 -2 - 1224 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - none -
fig|6666666.230106.peg.1738 CDS DS362242.1 128891 128121 -2 - 771 3-oxo-5-alpha-steroid 4-dehydrogenase - none -
fig|6666666.230106.peg.1739 CDS DS362242.1 128904 129026 3 + 123 hypothetical protein - none -
fig|6666666.230106.peg.1740 CDS DS362242.1 130481 129138 -2 - 1344 Citrate synthase (si) (EC 2.3.3.1) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.230106.peg.1741 CDS DS362242.1 131654 130494 -2 - 1161 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 5-FCL-like protein;
TCA Cycle
fig|6666666.230106.peg.1742 CDS DS362242.1 133901 131658 -2 - 2244 Aconitate hydratase (EC 4.2.1.3) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.230106.peg.1743 CDS DS362242.1 134016 135929 3 + 1914 putative helicase - none -
fig|6666666.230106.peg.1744 CDS DS362242.1 137034 135991 -3 - 1044 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.230106.peg.1745 CDS DS362242.1 137837 137085 -2 - 753 Acyl-ACP thioesterase - none -
fig|6666666.230106.peg.1746 CDS DS362242.1 138394 137834 -1 - 561 Acetolactate synthase small subunit (EC 2.2.1.6) Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.230106.peg.1747 CDS DS362242.1 140088 138427 -3 - 1662 Acetolactate synthase large subunit (EC 2.2.1.6) Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.230106.peg.1748 CDS DS362242.1 142108 140270 -1 - 1839 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.230106.peg.1749 CDS DS362242.1 142563 143135 3 + 573 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.230106.peg.1750 CDS DS362242.1 144515 143235 -2 - 1281 Putative inner membrane protein - none -
fig|6666666.230106.peg.1751 CDS DS362242.1 145162 144662 -1 - 501 hypothetical protein - none -
fig|6666666.230106.peg.1752 CDS DS362242.1 145934 147010 2 + 1077 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.230106.peg.1753 CDS DS362242.1 147020 148375 2 + 1356 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.230106.peg.1754 CDS DS362242.1 148391 149470 2 + 1080 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.230106.peg.1755 CDS DS362242.1 149572 150039 1 + 468 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.230106.peg.1756 CDS DS362242.1 152240 150051 -2 - 2190 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.230106.peg.1757 CDS DS362242.1 154703 152556 -2 - 2148 Methylmalonyl-CoA mutase (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis);
Propionyl-CoA to Succinyl-CoA Module;
Serine-glyoxylate cycle
fig|6666666.230106.peg.1758 CDS DS362242.1 156648 154750 -3 - 1899 Methylmalonyl-CoA mutase (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis);
Propionyl-CoA to Succinyl-CoA Module;
Serine-glyoxylate cycle
fig|6666666.230106.peg.1759 CDS DS362242.1 156997 158580 1 + 1584 putative membrane protein - none -
fig|6666666.230106.peg.1760 CDS DS362242.1 159298 158657 -1 - 642 Cytidylate kinase (EC 2.7.4.25) - none -
fig|6666666.230106.peg.1761 CDS DS362242.1 160743 159391 -3 - 1353 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230106.peg.1762 CDS DS362242.1 161001 161408 3 + 408 putative non-specific DNA binding protein - none -
fig|6666666.230106.peg.1763 CDS DS362242.1 161503 163233 1 + 1731 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.230106.peg.1764 CDS DS362242.1 163332 164327 3 + 996 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230106.peg.1765 CDS DS362242.1 164376 165713 3 + 1338 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.230106.peg.1766 CDS DS362242.1 165732 166598 3 + 867 Beta-phosphoglucomutase (EC 5.4.2.6) Maltose and Maltodextrin Utilization;
Trehalose Uptake and Utilization
fig|6666666.230106.peg.1767 CDS DS362242.1 167286 166654 -3 - 633 FIG00936531: hypothetical protein - none -
fig|6666666.230106.peg.1768 CDS DS362242.1 167451 167332 -3 - 120 hypothetical protein - none -
fig|6666666.230106.peg.1769 CDS DS362242.1 167498 167920 2 + 423 FIG00638667: hypothetical protein - none -
fig|6666666.230106.peg.1770 CDS DS362242.1 169220 168339 -2 - 882 FIG00406423: hypothetical protein - none -
fig|6666666.230106.peg.1771 CDS DS362242.1 170147 169329 -2 - 819 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.230106.peg.1772 CDS DS362242.1 170723 170250 -2 - 474 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
CBSS-315749.4.peg.3658
fig|6666666.230106.peg.1773 CDS DS362242.1 171371 170730 -2 - 642 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase
fig|6666666.230106.peg.1774 CDS DS362242.1 171778 172815 1 + 1038 Aspartate--ammonia ligase (EC 6.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.1775 CDS DS362242.1 172923 173585 3 + 663 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.230106.peg.1776 CDS DS362242.1 176210 173589 -2 - 2622 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor ECSIG4-SIG7
fig|6666666.230106.peg.1777 CDS DS362242.1 176982 176446 -3 - 537 HDIG domain protein - none -
fig|6666666.230106.peg.1778 CDS DS362242.1 178736 177003 -2 - 1734 Polymyxin resistance protein ArnT, undecaprenyl phosphate-alpha-L-Ara4N transferase; Melittin resistance protein PqaB - none -
fig|6666666.230106.peg.1779 CDS DS362242.1 178924 179301 1 + 378 FIG00407687: hypothetical protein - none -
fig|6666666.230106.peg.1780 CDS DS362242.1 179353 180324 1 + 972 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230106.peg.1781 CDS DS362242.1 180503 180384 -2 - 120 hypothetical protein - none -
fig|6666666.230106.peg.1782 CDS DS362242.1 180683 180970 2 + 288 hypothetical protein - none -
fig|6666666.230106.peg.1783 CDS DS362242.1 181071 180952 -3 - 120 hypothetical protein - none -
fig|6666666.230106.peg.1784 CDS DS362242.1 181188 181709 3 + 522 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.230106.peg.1785 CDS DS362242.1 181737 181865 3 + 129 hypothetical protein - none -
fig|6666666.230106.peg.1786 CDS DS362242.1 182097 182678 3 + 582 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230106.peg.1787 CDS DS362242.1 182846 183097 2 + 252 hypothetical protein - none -
fig|6666666.230106.peg.1788 CDS DS362242.1 184063 183110 -1 - 954 putative sodium-dependent transporter - none -
fig|6666666.230106.peg.1789 CDS DS362242.1 184264 185499 1 + 1236 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230106.peg.1790 CDS DS362242.1 185513 186406 2 + 894 Mce4/Rv3499c/MTV023.06c protein - none -
fig|6666666.230106.peg.1791 CDS DS362242.1 186758 188143 2 + 1386 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.230106.peg.1792 CDS DS362242.1 189004 188222 -1 - 783 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.230106.peg.1793 CDS DS362242.1 189374 191911 2 + 2538 Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.230106.peg.1794 CDS DS362242.1 192043 194736 1 + 2694 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.1795 CDS DS362242.1 195617 195501 -2 - 117 hypothetical protein - none -
fig|6666666.230106.peg.1796 CDS DS362242.1 196023 196331 3 + 309 FIG00937196: hypothetical protein - none -
fig|6666666.230106.peg.1797 CDS DS362242.1 196405 196554 1 + 150 FIG00408583: hypothetical protein - none -
fig|6666666.230106.peg.1798 CDS DS362242.1 196566 196787 3 + 222 FIG00896355: hypothetical protein - none -
fig|6666666.230106.peg.1799 CDS DS362242.1 196811 197230 2 + 420 FIG00899057: hypothetical protein - none -
fig|6666666.230106.peg.1800 CDS DS362242.1 197227 198492 1 + 1266 FIG00937820: hypothetical protein - none -
fig|6666666.230106.peg.1801 CDS DS362242.1 198571 198774 1 + 204 FIG00938992: hypothetical protein - none -
fig|6666666.230106.peg.1802 CDS DS362242.1 198964 199269 1 + 306 FIG00897394: hypothetical protein - none -
fig|6666666.230106.peg.1803 CDS DS362242.1 199323 199631 3 + 309 FIG00403252: hypothetical protein - none -
fig|6666666.230106.peg.1804 CDS DS362242.1 199748 199969 2 + 222 FIG00938196: hypothetical protein - none -
fig|6666666.230106.peg.1805 CDS DS362242.1 200559 200032 -3 - 528 Lysozyme-related protein - none -
fig|6666666.230106.peg.1806 CDS DS362242.1 201062 200556 -2 - 507 Conjugative transposon protein TraQ Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1807 CDS DS362242.1 201961 201062 -1 - 900 Conjugative transposon protein TraP @ DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230106.peg.1808 CDS DS362242.1 202545 201970 -3 - 576 Conjugative transposon protein TraO Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1809 CDS DS362242.1 203534 202548 -2 - 987 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1810 CDS DS362242.1 204959 203604 -2 - 1356 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1811 CDS DS362242.1 205248 204940 -3 - 309 Conjugative transposon protein TraL Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1812 CDS DS362242.1 205878 205255 -3 - 624 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1813 CDS DS362242.1 206914 205910 -1 - 1005 Conjugative transposon protein TraJ Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1814 CDS DS362242.1 207547 206918 -1 - 630 Conjugative transposon protein TraI Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1815 CDS DS362242.1 207940 207578 -1 - 363 Conjugative transposon protein TraH Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1816 CDS DS362242.1 210503 207999 -2 - 2505 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1817 CDS DS362242.1 210832 210500 -1 - 333 Conjugative transposon protein TraF Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1818 CDS DS362242.1 211154 210843 -2 - 312 Mobile element protein - none -
fig|6666666.230106.peg.1819 CDS DS362242.1 212096 211356 -2 - 741 Conjugative transposon protein TraD Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1820 CDS DS362242.1 212209 212093 -1 - 117 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1821 CDS DS362242.1 212928 212479 -3 - 450 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1822 CDS DS362242.1 213689 212934 -2 - 756 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1823 CDS DS362242.1 213914 214057 2 + 144 hypothetical protein - none -
fig|6666666.230106.peg.1824 CDS DS362242.1 214371 214799 3 + 429 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1825 CDS DS362242.1 214778 216028 2 + 1251 Mobile element protein - none -
fig|6666666.230106.peg.1826 CDS DS362242.1 216061 216987 1 + 927 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1827 CDS DS362242.1 217624 219276 1 + 1653 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) Group II intron-associated genes
fig|6666666.230106.peg.1828 CDS DS362242.1 219317 220486 2 + 1170 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.1829 CDS DS362242.1 220994 220581 -2 - 414 hypothetical protein - none -
fig|6666666.230106.peg.1830 CDS DS362242.1 222454 221000 -1 - 1455 ATP-dependent DNA helicase - none -
fig|6666666.230106.peg.1831 CDS DS362242.1 223194 222583 -3 - 612 tetracycline resistance element mobilization regulatory protein RteC - none -
fig|6666666.230106.peg.1832 CDS DS362242.1 223805 223440 -2 - 366 hypothetical protein - none -
fig|6666666.230106.peg.1833 CDS DS362242.1 225453 224146 -3 - 1308 Response regulator of zinc sigma-54-dependent two-component system Zinc resistance
fig|6666666.230106.peg.1834 CDS DS362242.1 227779 225434 -1 - 2346 FIG00939874: hypothetical protein - none -
fig|6666666.230106.peg.1835 CDS DS362242.1 229261 228557 -1 - 705 hypothetical protein - none -
fig|6666666.230106.peg.1836 CDS DS362242.1 229573 229283 -1 - 291 hypothetical protein - none -
fig|6666666.230106.peg.1837 CDS DS362242.1 231687 230008 -3 - 1680 Large exoproteins involved in heme utilization or adhesion CBSS-316057.3.peg.3521
fig|6666666.230106.peg.1838 CDS DS362243.1 1798 1664 -1 - 135 hypothetical protein - none -
fig|6666666.230106.peg.1839 CDS DS362243.1 1893 2483 3 + 591 V-type ATP synthase subunit E (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230106.peg.1840 CDS DS362243.1 2500 3339 1 + 840 V-type ATP synthase subunit C (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230106.peg.1841 CDS DS362243.1 3359 5113 2 + 1755 V-type ATP synthase subunit A (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230106.peg.1842 CDS DS362243.1 5254 6579 1 + 1326 V-type ATP synthase subunit B (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230106.peg.1843 CDS DS362243.1 6700 7305 1 + 606 V-type ATP synthase subunit D (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230106.peg.1844 CDS DS362243.1 7302 9128 3 + 1827 V-type ATP synthase subunit I (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230106.peg.1845 CDS DS362243.1 9162 9581 3 + 420 V-type ATP synthase subunit K (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230106.peg.1846 CDS DS362243.1 9877 11538 1 + 1662 Glycogen - none -
fig|6666666.230106.peg.1847 CDS DS362243.1 11569 14133 1 + 2565 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.1848 CDS DS362243.1 14764 14258 -1 - 507 Flavodoxin 1 Flavodoxin
fig|6666666.230106.peg.1849 CDS DS362243.1 15007 15303 1 + 297 hypothetical protein - none -
fig|6666666.230106.peg.1850 CDS DS362243.1 15340 16086 1 + 747 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.230106.peg.1851 CDS DS362243.1 16837 16115 -1 - 723 FIG00408327: hypothetical protein - none -
fig|6666666.230106.peg.1852 CDS DS362243.1 16950 18296 3 + 1347 FIG00899271: hypothetical protein - none -
fig|6666666.230106.peg.1853 CDS DS362243.1 18967 18461 -1 - 507 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.230106.peg.1854 CDS DS362243.1 21312 19105 -3 - 2208 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.230106.peg.1855 CDS DS362243.1 21739 21620 -1 - 120 hypothetical protein - none -
fig|6666666.230106.peg.1856 CDS DS362243.1 21738 22703 3 + 966 Methionine synthase II (cobalamin-independent) - none -
fig|6666666.230106.peg.1857 CDS DS362243.1 23957 22860 -2 - 1098 Thiol:disulfide interchange protein - none -
fig|6666666.230106.peg.1858 CDS DS362243.1 24584 24081 -2 - 504 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.230106.peg.1859 CDS DS362243.1 26070 24760 -3 - 1311 Methionine transporter MetT Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230106.peg.1860 CDS DS362243.1 27758 26247 -2 - 1512 Altronate dehydratase (EC 4.2.1.7) - none -
fig|6666666.230106.peg.1861 CDS DS362243.1 28928 27873 -2 - 1056 Transcriptional regulator - none -
fig|6666666.230106.peg.1862 CDS DS362243.1 29270 30295 2 + 1026 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.230106.peg.1863 CDS DS362243.1 30356 30706 2 + 351 FIG00416149: hypothetical protein - none -
fig|6666666.230106.peg.1864 CDS DS362243.1 30813 31481 3 + 669 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.230106.peg.1865 CDS DS362243.1 32121 33293 3 + 1173 FIG00418002: hypothetical protein - none -
fig|6666666.230106.peg.1866 CDS DS362243.1 33338 35239 2 + 1902 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.1867 CDS DS362243.1 35244 36290 3 + 1047 Beta-1,3-glucosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.230106.peg.1868 CDS DS362243.1 36297 37337 3 + 1041 glycosyltransferase family 2 protein - none -
fig|6666666.230106.peg.1869 CDS DS362243.1 37757 38533 2 + 777 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230106.peg.1870 CDS DS362243.1 39933 38527 -3 - 1407 O-antigen flippase Wzx - none -
fig|6666666.230106.peg.1871 CDS DS362243.1 40157 41143 2 + 987 FIG00410152: hypothetical protein - none -
fig|6666666.230106.peg.1872 CDS DS362243.1 41278 42195 1 + 918 Glycosyl transferase, family 2 - none -
fig|6666666.230106.peg.1873 CDS DS362243.1 43484 42219 -2 - 1266 Conserved protein, with a weak D-galactarate dehydratase/altronate hydrolase domain - none -
fig|6666666.230106.peg.1874 CDS DS362243.1 43921 43478 -1 - 444 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230106.peg.1875 CDS DS362243.1 44068 43955 -1 - 114 hypothetical protein - none -
fig|6666666.230106.peg.1876 CDS DS362243.1 44659 44144 -1 - 516 FIG00416394: hypothetical protein - none -
fig|6666666.230106.peg.1877 CDS DS362243.1 44966 45091 2 + 126 hypothetical protein - none -
fig|6666666.230106.peg.1878 CDS DS362243.1 45311 45066 -2 - 246 FIG00417360: hypothetical protein - none -
fig|6666666.230106.peg.1879 CDS DS362243.1 47241 45427 -3 - 1815 DNA primase/helicase (EC 2.7.7.-) - none -
fig|6666666.230106.peg.1880 CDS DS362243.1 47459 47253 -2 - 207 hypothetical protein - none -
fig|6666666.230106.peg.1881 CDS DS362243.1 48502 47483 -1 - 1020 FIG00418196: hypothetical protein - none -
fig|6666666.230106.peg.1882 CDS DS362243.1 49033 48824 -1 - 210 hypothetical protein - none -
fig|6666666.230106.peg.1883 CDS DS362243.1 51202 50201 -1 - 1002 Biotin carboxylase (EC 6.3.4.14) - none -
fig|6666666.230106.peg.1884 CDS DS362243.1 52401 51199 -3 - 1203 Glycosyl transferase, group 1 CBSS-258594.1.peg.3339
fig|6666666.230106.peg.1885 CDS DS362243.1 53535 52414 -3 - 1122 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230106.peg.1886 CDS DS362243.1 54737 53532 -2 - 1206 FIG00897759: hypothetical protein - none -
fig|6666666.230106.peg.1887 CDS DS362243.1 56182 54761 -1 - 1422 Teichuronic acid biosynthesis protein TuaE, putative secreted polysaccharide polymerase Teichuronic acid biosynthesis
fig|6666666.230106.peg.1888 CDS DS362243.1 58378 56219 -1 - 2160 Tyrosine-protein kinase Wzc (EC 2.7.10.2) CBSS-258594.1.peg.3339
fig|6666666.230106.peg.1889 CDS DS362243.1 59235 58387 -3 - 849 FIG00898846: hypothetical protein - none -
fig|6666666.230106.peg.1890 CDS DS362243.1 60420 59254 -3 - 1167 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) CBSS-258594.1.peg.3339
fig|6666666.230106.peg.1891 CDS DS362243.1 60798 60439 -3 - 360 putative two-component system response regulator - none -
fig|6666666.230106.peg.1892 CDS DS362243.1 63106 60824 -1 - 2283 FIG00403729: hypothetical protein - none -
fig|6666666.230106.peg.1893 CDS DS362243.1 64327 63287 -1 - 1041 L-asparaginase I, cytoplasmic (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.1894 CDS DS362243.1 65248 64469 -1 - 780 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230106.peg.1895 CDS DS362243.1 66013 65417 -1 - 597 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230106.peg.1896 CDS DS362243.1 66992 66165 -2 - 828 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230106.peg.1897 CDS DS362243.1 67992 66997 -3 - 996 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230106.peg.1898 CDS DS362243.1 68704 68057 -1 - 648 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.230106.peg.1899 CDS DS362243.1 70251 68851 -3 - 1401 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230106.peg.1900 CDS DS362243.1 71484 70306 -3 - 1179 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230106.peg.1901 CDS DS362243.1 71874 72047 3 + 174 hypothetical protein - none -
fig|6666666.230106.peg.1902 CDS DS362243.1 72113 72688 2 + 576 FIG00412396: hypothetical protein - none -
fig|6666666.230106.peg.1903 CDS DS362243.1 74072 72774 -2 - 1299 putative secreted tripeptidyl aminopeptidase - none -
fig|6666666.230106.peg.1904 CDS DS362243.1 76443 74254 -3 - 2190 Glutamine synthetase type III, GlnN (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.230106.peg.1905 CDS DS362243.1 77757 76489 -3 - 1269 Ammonium transporter family Ammonia assimilation
fig|6666666.230106.peg.1906 CDS DS362243.1 78172 77816 -1 - 357 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.230106.peg.1907 CDS DS362243.1 78976 78251 -1 - 726 FrrB - none -
fig|6666666.230106.peg.1908 CDS DS362243.1 80294 79062 -2 - 1233 L,L-diaminopimelate aminotransferase (EC 2.6.1.83) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230106.peg.1909 CDS DS362243.1 81170 80322 -2 - 849 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230106.peg.1910 CDS DS362243.1 82275 81511 -3 - 765 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.230106.peg.1911 CDS DS362243.1 83036 82386 -2 - 651 hypothetical protein - none -
fig|6666666.230106.peg.1912 CDS DS362243.1 83204 83389 2 + 186 hypothetical protein - none -
fig|6666666.230106.peg.1913 CDS DS362243.1 83663 83403 -2 - 261 hypothetical protein - none -
fig|6666666.230106.peg.1914 CDS DS362243.1 84577 83660 -1 - 918 putative transposable insertion element - none -
fig|6666666.230106.peg.1915 CDS DS362243.1 85744 85043 -1 - 702 DnaD domain protein - none -
fig|6666666.230106.peg.1916 CDS DS362243.1 86135 85770 -2 - 366 hypothetical protein - none -
fig|6666666.230106.peg.1917 CDS DS362243.1 86675 86316 -2 - 360 hypothetical protein - none -
fig|6666666.230106.peg.1918 CDS DS362243.1 87296 87826 2 + 531 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230106.peg.1919 CDS DS362243.1 87897 88382 3 + 486 UpdZ protein - none -
fig|6666666.230106.peg.1920 CDS DS362243.1 88456 90024 1 + 1569 hypothetical protein - none -
fig|6666666.230106.peg.1921 CDS DS362243.1 90035 90187 2 + 153 hypothetical protein - none -
fig|6666666.230106.peg.1922 CDS DS362243.1 90514 91131 1 + 618 Mobile element protein - none -
fig|6666666.230106.peg.1923 CDS DS362243.1 91290 92552 3 + 1263 Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids - none -
fig|6666666.230106.peg.1924 CDS DS362243.1 93038 93175 2 + 138 hypothetical protein - none -
fig|6666666.230106.peg.1925 CDS DS362243.1 93159 94046 3 + 888 Probable beta-glycosyltransferase - none -
fig|6666666.230106.peg.1926 CDS DS362243.1 94043 95137 2 + 1095 Glycosyl transferase, group 1 family protein - none -
fig|6666666.230106.peg.1927 CDS DS362243.1 95134 96516 1 + 1383 Putative uncharacterized protein in cluster with two glycosyl transferases - none -
fig|6666666.230106.peg.1928 CDS DS362243.1 96521 97516 2 + 996 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230106.peg.1929 CDS DS362243.1 97513 98889 1 + 1377 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster;
Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230106.peg.1930 CDS DS362243.1 98892 100160 3 + 1269 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230106.peg.1931 CDS DS362243.1 100132 100938 1 + 807 putative glycosyltransferase - none -
fig|6666666.230106.peg.1932 CDS DS362243.1 101133 101543 3 + 411 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) CBSS-258594.1.peg.3339
fig|6666666.230106.peg.1933 CDS DS362243.1 101614 102855 1 + 1242 Lipopolysaccharide biosynthesis protein RffA - none -
fig|6666666.230106.peg.1934 CDS DS362243.1 103125 102928 -3 - 198 hypothetical protein - none -
fig|6666666.230106.peg.1935 CDS DS362243.1 103458 103628 3 + 171 hypothetical protein - none -
fig|6666666.230106.peg.1936 CDS DS362243.1 103701 105494 3 + 1794 Mobile element protein - none -
fig|6666666.230106.peg.1937 CDS DS362243.1 105742 106245 1 + 504 hypothetical protein - none -
fig|6666666.230106.peg.1938 CDS DS362243.1 106273 106386 1 + 114 hypothetical protein - none -
fig|6666666.230106.peg.1939 CDS DS362243.1 108105 106447 -3 - 1659 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.1940 CDS DS362243.1 109574 108216 -2 - 1359 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.1941 CDS DS362243.1 114209 109659 -2 - 4551 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.1942 CDS DS362243.1 114578 116422 2 + 1845 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.230106.peg.1943 CDS DS362243.1 116569 118452 1 + 1884 Amidophosphoribosyltransferase (EC 2.4.2.14) Colicin V and Bacteriocin Production Cluster;
De Novo Purine Biosynthesis
fig|6666666.230106.peg.1944 CDS DS362243.1 118461 119537 3 + 1077 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.230106.peg.1945 CDS DS362243.1 119749 122991 1 + 3243 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.230106.peg.1946 CDS DS362243.1 123029 123577 2 + 549 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.230106.peg.1947 CDS DS362243.1 124506 123580 -3 - 927 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.1948 CDS DS362243.1 124665 125927 3 + 1263 Type I secretion system, outer membrane component LapE - none -
fig|6666666.230106.peg.1949 CDS DS362243.1 125962 126852 1 + 891 FIG00938133: hypothetical protein - none -
fig|6666666.230106.peg.1950 CDS DS362243.1 126830 128287 2 + 1458 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.230106.peg.1951 CDS DS362243.1 128376 128263 -3 - 114 hypothetical protein - none -
fig|6666666.230106.peg.1952 CDS DS362243.1 128335 129438 1 + 1104 ABC transport system, permease component YbhR - none -
fig|6666666.230106.peg.1953 CDS DS362243.1 129448 129570 1 + 123 hypothetical protein - none -
fig|6666666.230106.peg.1954 CDS DS362243.1 129551 130666 2 + 1116 ABC-type multidrug transport system, permease component - none -
fig|6666666.230106.peg.1955 CDS DS362243.1 130979 132115 2 + 1137 Acyltransferase - none -
fig|6666666.230106.peg.1956 CDS DS362243.1 132570 132196 -3 - 375 Small heat shock protein - none -
fig|6666666.230106.peg.1957 CDS DS362243.1 133352 132885 -2 - 468 Ser-tRNA(Ala) deacylase; Gly-tRNA(Ala) deacylase tRNA aminoacylation, Ala;
tRNA aminoacylation, Ala
fig|6666666.230106.peg.1958 CDS DS362243.1 134688 133387 -3 - 1302 FIG00417958: hypothetical protein - none -
fig|6666666.230106.peg.1959 CDS DS362243.1 134698 134820 1 + 123 hypothetical protein - none -
fig|6666666.230106.peg.1960 CDS DS362243.1 134895 136553 3 + 1659 Regulatory protein SusR Cellulosome
fig|6666666.230106.peg.1961 CDS DS362243.1 136839 139805 3 + 2967 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.1962 CDS DS362243.1 139847 141025 2 + 1179 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.1963 CDS DS362243.1 141032 141310 2 + 279 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.1964 CDS DS362243.1 141330 142826 3 + 1497 FIG00403304: hypothetical protein - none -
fig|6666666.230106.peg.1965 CDS DS362243.1 142840 144645 1 + 1806 dextranase precursor - none -
fig|6666666.230106.peg.1966 CDS DS362243.1 144680 147178 2 + 2499 Alpha-xylosidase (EC 3.2.1.-) Xylose utilization
fig|6666666.230106.peg.1967 CDS DS362243.1 147200 149353 2 + 2154 Alpha-glucosidase SusB (EC 3.2.1.20) Cellulosome
fig|6666666.230106.peg.1968 CDS DS362243.1 151364 149697 -2 - 1668 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.230106.peg.1969 CDS DS362243.1 152931 151480 -3 - 1452 Na(+)/H(+) antiporter - none -
fig|6666666.230106.peg.1970 CDS DS362243.1 154333 153026 -1 - 1308 Sensor histidine kinase - none -
fig|6666666.230106.peg.1971 CDS DS362243.1 155693 154323 -2 - 1371 Two-component system response regulator - none -
fig|6666666.230106.peg.1972 CDS DS362243.1 156548 155937 -2 - 612 FIG00403603: hypothetical protein - none -
fig|6666666.230106.peg.1973 CDS DS362243.1 157455 156649 -3 - 807 putative calcineurin superfamily phosphohydrolase - none -
fig|6666666.230106.peg.1974 CDS DS362243.1 157740 160055 3 + 2316 ABC transporter permease protein - none -
fig|6666666.230106.peg.1975 CDS DS362243.1 160080 160763 3 + 684 ABC transporter ATP-binding protein - none -
fig|6666666.230106.peg.1976 CDS DS362243.1 160785 163088 3 + 2304 ABC transporter permease protein - none -
fig|6666666.230106.peg.1977 CDS DS362243.1 163108 165411 1 + 2304 ABC transporter permease protein - none -
fig|6666666.230106.peg.1978 CDS DS362243.1 166918 165563 -1 - 1356 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230106.peg.1979 CDS DS362243.1 166959 167684 3 + 726 putative phosphatase/phosphohexomutase - none -
fig|6666666.230106.peg.1980 CDS DS362243.1 167845 168582 1 + 738 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.230106.peg.1981 CDS DS362243.1 168611 169540 2 + 930 Major facilitator family transporter - none -
fig|6666666.230106.peg.1982 CDS DS362243.1 169887 169516 -3 - 372 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.230106.peg.1983 CDS DS362243.1 172123 169904 -1 - 2220 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I Stringent Response, (p)ppGpp metabolism
fig|6666666.230106.peg.1984 CDS DS362243.1 172229 173746 2 + 1518 Ribosylnicotinamide kinase (EC 2.7.1.22) homolog / Unknown conserved in Flavobacteria - none -
fig|6666666.230106.peg.1985 CDS DS362243.1 173885 175051 2 + 1167 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) De Novo Purine Biosynthesis
fig|6666666.230106.peg.1986 CDS DS362243.1 175615 175121 -1 - 495 hypothetical protein - none -
fig|6666666.230106.peg.1987 CDS DS362243.1 176532 175699 -3 - 834 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.230106.peg.1988 CDS DS362243.1 176645 178402 2 + 1758 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.230106.peg.1989 CDS DS362243.1 183032 178560 -2 - 4473 FIG00937153: hypothetical protein - none -
fig|6666666.230106.peg.1990 CDS DS362243.1 183237 184259 3 + 1023 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ
fig|6666666.230106.peg.1991 CDS DS362243.1 184273 184740 1 + 468 Molybdopterin binding motif, CinA N-terminal domain / C-terminal domain of CinA type S NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.230106.peg.1992 CDS DS362243.1 184898 185122 2 + 225 LSU ribosomal protein L28p - none -
fig|6666666.230106.peg.1993 CDS DS362243.1 185176 185331 1 + 156 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent - none -
fig|6666666.230106.peg.1994 CDS DS362243.1 185346 185504 3 + 159 FIG00402702: hypothetical protein - none -
fig|6666666.230106.peg.1995 CDS DS362243.1 185755 186714 1 + 960 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.230106.peg.1996 CDS DS362243.1 186711 188009 3 + 1299 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.230106.peg.1997 CDS DS362243.1 188139 188360 3 + 222 Integration host factor alpha subunit DNA structural proteins, bacterial
fig|6666666.230106.peg.1998 CDS DS362243.1 188387 189601 2 + 1215 putative integration host factor IHF alpha subunit - none -
fig|6666666.230106.peg.1999 CDS DS362243.1 189763 190758 1 + 996 MoxR-like ATPase in aerotolerance operon Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230106.peg.2000 CDS DS362243.1 190927 191796 1 + 870 hypothetical protein PA3071 Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230106.peg.2001 CDS DS362243.1 191804 192883 2 + 1080 FIG00936810: hypothetical protein - none -
fig|6666666.230106.peg.2002 CDS DS362243.1 192979 193962 1 + 984 BatA (Bacteroides aerotolerance operon) Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230106.peg.2003 CDS DS362243.1 194043 195071 3 + 1029 BatB Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230106.peg.2004 CDS DS362243.1 195077 195688 2 + 612 BatC Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230106.peg.2005 CDS DS362243.1 195658 195777 1 + 120 BatC Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230106.peg.2006 CDS DS362243.1 195800 197644 2 + 1845 BatD Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230106.peg.2007 CDS DS362243.1 197655 198500 3 + 846 BatE Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230106.peg.2008 CDS DS362243.1 199106 200236 2 + 1131 UspA - none -
fig|6666666.230106.peg.2009 CDS DS362243.1 201645 200425 -3 - 1221 putative tetratricopeptide repeat family protein - none -
fig|6666666.230106.peg.2010 CDS DS362243.1 204075 201697 -3 - 2379 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.230106.peg.2011 CDS DS362243.1 204527 207055 2 + 2529 ATP-dependent Clp protease ATP-binding subunit ClpA ClpAS cluster;
Proteolysis in bacteria, ATP-dependent;
Ribosome recycling related cluster
fig|6666666.230106.peg.2012 CDS DS362243.1 207167 209215 2 + 2049 Chaperone protein HtpG Protein chaperones
fig|6666666.230106.peg.2013 CDS DS362243.1 209397 211694 3 + 2298 putative patatin-like phospholipase - none -
fig|6666666.230106.peg.2014 CDS DS362243.1 213328 212435 -1 - 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230106.peg.2015 CDS DS362243.1 215429 213432 -2 - 1998 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.230106.peg.2016 CDS DS362243.1 215519 216196 2 + 678 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.230106.peg.2017 CDS DS362243.1 217201 216290 -1 - 912 Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.230106.peg.2018 CDS DS362243.1 217965 217189 -3 - 777 Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.230106.peg.2019 CDS DS362243.1 218520 218083 -3 - 438 FIG00939128: hypothetical protein - none -
fig|6666666.230106.peg.2020 CDS DS362243.1 220474 219455 -1 - 1020 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.230106.peg.2021 CDS DS362243.1 221292 220516 -3 - 777 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.230106.peg.2022 CDS DS362243.1 221471 221806 2 + 336 FIG00936906: hypothetical protein - none -
fig|6666666.230106.peg.2023 CDS DS362243.1 222727 221837 -1 - 891 Beta-lactamase (EC 3.5.2.6) Beta-lactamase
fig|6666666.230106.peg.2024 CDS DS362243.1 225978 222865 -3 - 3114 RND efflux system, inner membrane transporter CmeB Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.2025 CDS DS362243.1 227107 226004 -1 - 1104 Membrane fusion protein of RND family multidrug efflux pump Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.2026 CDS DS362243.1 228566 227133 -2 - 1434 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.2027 CDS DS362243.1 229454 228660 -2 - 795 FIG00414651: hypothetical protein - none -
fig|6666666.230106.peg.2028 CDS DS362243.1 230634 229468 -3 - 1167 FIG00406678: hypothetical protein - none -
fig|6666666.230106.peg.2029 CDS DS362243.1 231619 230780 -1 - 840 FIG137478: Hypothetical protein tRNA modification Bacteria
fig|6666666.230106.peg.2030 CDS DS362243.1 232719 231625 -3 - 1095 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.230106.peg.2031 CDS DS362243.1 233010 233684 3 + 675 FIG00412714: hypothetical protein - none -
fig|6666666.230106.peg.2032 CDS DS362243.1 233727 234119 3 + 393 FIG00402962: hypothetical protein - none -
fig|6666666.230106.peg.2033 CDS DS362243.1 234931 234122 -1 - 810 YbbM seven transmembrane helix protein Broadly distributed proteins not in subsystems
fig|6666666.230106.peg.2034 CDS DS362243.1 235566 234943 -3 - 624 YbbL ABC transporter ATP-binding protein Broadly distributed proteins not in subsystems
fig|6666666.230106.peg.2035 CDS DS362243.1 235659 236195 3 + 537 Ferredoxin domain containing protein - none -
fig|6666666.230106.peg.2036 CDS DS362243.1 236334 237449 3 + 1116 Agmatine deiminase (EC 3.5.3.12) Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.230106.peg.2037 CDS DS362243.1 237490 238377 1 + 888 N-carbamoylputrescine amidase (3.5.1.53) Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.230106.peg.2038 CDS DS362243.1 238784 238404 -2 - 381 FIG00406468: hypothetical protein - none -
fig|6666666.230106.peg.2039 CDS DS362243.1 240563 238806 -2 - 1758 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.230106.peg.2040 CDS DS362243.1 241738 240695 -1 - 1044 Transcription regulator [contains diacylglycerol kinase catalytic domain] - none -
fig|6666666.230106.peg.2041 CDS DS362243.1 241947 241735 -3 - 213 hypothetical protein - none -
fig|6666666.230106.peg.2042 CDS DS362243.1 241946 243133 2 + 1188 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.230106.peg.2043 CDS DS362243.1 243233 244039 2 + 807 putative lipoprotein - none -
fig|6666666.230106.peg.2044 CDS DS362243.1 244383 245069 3 + 687 FIG00405116: hypothetical protein - none -
fig|6666666.230106.peg.2045 CDS DS362243.1 246153 245047 -3 - 1107 hypothetical protein - none -
fig|6666666.230106.peg.2046 CDS DS362243.1 246416 247177 2 + 762 Mobile element protein - none -
fig|6666666.230106.peg.2047 CDS DS362244.1 1991 1074 -2 - 918 FIG00408816: hypothetical protein - none -
fig|6666666.230106.peg.2048 CDS DS362244.1 2895 2005 -3 - 891 FIG00896374: hypothetical protein - none -
fig|6666666.230106.peg.2049 CDS DS362244.1 3647 3444 -2 - 204 hypothetical protein - none -
fig|6666666.230106.peg.2050 CDS DS362244.1 3889 4992 1 + 1104 Phage integrase precursor - none -
fig|6666666.230106.peg.2051 CDS DS362244.1 5142 5273 3 + 132 hypothetical protein - none -
fig|6666666.230106.peg.2052 CDS DS362244.1 5476 6582 1 + 1107 FIG00896374: hypothetical protein - none -
fig|6666666.230106.peg.2053 CDS DS362244.1 6596 7471 2 + 876 FIG00408816: hypothetical protein - none -
fig|6666666.230106.peg.2054 CDS DS362244.1 7527 8651 3 + 1125 Major outer membrane protein OmpA - none -
fig|6666666.230106.peg.2055 CDS DS362244.1 8779 9531 1 + 753 FIG00897943: hypothetical protein - none -
fig|6666666.230106.peg.2056 CDS DS362244.1 9647 10072 2 + 426 Putative Holliday junction resolvase YqgF - none -
fig|6666666.230106.peg.2057 CDS DS362244.1 10116 10673 3 + 558 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.230106.peg.2058 CDS DS362244.1 10791 12851 3 + 2061 TPR repeat precursor - none -
fig|6666666.230106.peg.2059 CDS DS362244.1 12931 14871 1 + 1941 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.230106.peg.2060 CDS DS362244.1 14947 15594 1 + 648 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.230106.peg.2061 CDS DS362244.1 16017 16310 3 + 294 LSU ribosomal protein L20p - none -
fig|6666666.230106.peg.2062 CDS DS362244.1 16740 16880 3 + 141 hypothetical protein - none -
fig|6666666.230106.peg.2063 CDS DS362244.1 18156 16849 -3 - 1308 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) Aromatic amino acid interconversions with aryl acids
fig|6666666.230106.peg.2064 CDS DS362244.1 18768 18187 -3 - 582 Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8) Aromatic amino acid interconversions with aryl acids;
Indole-pyruvate oxidoreductase complex
fig|6666666.230106.peg.2065 CDS DS362244.1 20365 18773 -1 - 1593 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) Aromatic amino acid interconversions with aryl acids;
Indole-pyruvate oxidoreductase complex
fig|6666666.230106.peg.2066 CDS DS362244.1 21473 20442 -2 - 1032 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.230106.peg.2067 CDS DS362244.1 22649 21540 -2 - 1110 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.230106.peg.2068 CDS DS362244.1 22863 22696 -3 - 168 Sialic acid-specific 9-O-acetylesterase - none -
fig|6666666.230106.peg.2069 CDS DS362244.1 23282 22977 -2 - 306 Sialic acid-specific 9-O-acetylesterase - none -
fig|6666666.230106.peg.2070 CDS DS362244.1 23892 23725 -3 - 168 hypothetical protein - none -
fig|6666666.230106.peg.2071 CDS DS362244.1 23934 25607 3 + 1674 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) N-linked Glycosylation in Bacteria
fig|6666666.230106.peg.2072 CDS DS362244.1 25604 25735 2 + 132 hypothetical protein - none -
fig|6666666.230106.peg.2073 CDS DS362244.1 25859 28216 2 + 2358 Polysialic acid transport protein KpsD precursor - none -
fig|6666666.230106.peg.2074 CDS DS362244.1 28225 29331 1 + 1107 putative protein involved in capsular polysaccharide biosynthesis - none -
fig|6666666.230106.peg.2075 CDS DS362244.1 29328 29657 3 + 330 hypothetical protein - none -
fig|6666666.230106.peg.2076 CDS DS362244.1 29654 30115 2 + 462 Tryptophan synthase beta chain like (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.230106.peg.2077 CDS DS362244.1 31290 30112 -3 - 1179 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.2078 CDS DS362244.1 31727 32659 2 + 933 FIG00938776: hypothetical protein - none -
fig|6666666.230106.peg.2079 CDS DS362244.1 32672 34072 2 + 1401 D-xylose proton-symporter XylE Xylose utilization
fig|6666666.230106.peg.2080 CDS DS362244.1 34096 35271 1 + 1176 N-acylglucosamine 2-epimerase (EC 5.1.3.8) Sialic Acid Metabolism
fig|6666666.230106.peg.2081 CDS DS362244.1 35299 38406 1 + 3108 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.2082 CDS DS362244.1 38441 40132 2 + 1692 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.2083 CDS DS362244.1 40190 41290 2 + 1101 hypothetical protein - none -
fig|6666666.230106.peg.2084 CDS DS362244.1 41367 42044 3 + 678 hypothetical protein - none -
fig|6666666.230106.peg.2085 CDS DS362244.1 42068 45238 2 + 3171 TPR-domain containing protein - none -
fig|6666666.230106.peg.2086 CDS DS362244.1 45274 48099 1 + 2826 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230106.peg.2087 CDS DS362244.1 49339 48164 -1 - 1176 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.230106.peg.2088 CDS DS362244.1 49941 49351 -3 - 591 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.230106.peg.2089 CDS DS362244.1 50205 51824 3 + 1620 ABC transporter ATP-binding protein uup - none -
fig|6666666.230106.peg.2090 CDS DS362244.1 53157 52105 -3 - 1053 FIG00404447: hypothetical protein - none -
fig|6666666.230106.peg.2091 CDS DS362244.1 53270 54166 2 + 897 putative metal-dependent membrane protease - none -
fig|6666666.230106.peg.2092 CDS DS362244.1 56369 54234 -2 - 2136 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.230106.peg.2093 CDS DS362244.1 56358 57065 3 + 708 FIG00406763: hypothetical protein - none -
fig|6666666.230106.peg.2094 CDS DS362244.1 57121 58968 1 + 1848 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.2095 CDS DS362244.1 58995 60740 3 + 1746 5@1-nucleotidase (EC 3.1.3.5); 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16); Putative UDP-sugar hydrolase (EC 3.6.1.45) CBSS-226186.1.peg.4416;
Purine conversions;
Purine conversions
fig|6666666.230106.peg.2096 CDS DS362244.1 61291 63600 1 + 2310 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.230106.peg.2097 CDS DS362244.1 63729 64553 3 + 825 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.2098 CDS DS362244.1 64616 65377 2 + 762 Creatinine amidohydrolase (EC 3.5.2.10) Creatine and Creatinine Degradation
fig|6666666.230106.peg.2099 CDS DS362244.1 65987 65565 -2 - 423 FIG00936914: hypothetical protein - none -
fig|6666666.230106.peg.2100 CDS DS362244.1 67343 66027 -2 - 1317 FIG00410646: hypothetical protein - none -
fig|6666666.230106.peg.2101 CDS DS362244.1 68620 67373 -1 - 1248 FIG00416648: hypothetical protein - none -
fig|6666666.230106.peg.2102 CDS DS362244.1 69372 68662 -3 - 711 FIG00405599: hypothetical protein - none -
fig|6666666.230106.peg.2103 CDS DS362244.1 70475 69366 -2 - 1110 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) Capsular heptose biosynthesis
fig|6666666.230106.peg.2104 CDS DS362244.1 71278 70508 -1 - 771 N-acetylmannosaminyltransferase (EC 2.4.1.187) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230106.peg.2105 CDS DS362244.1 72481 71381 -1 - 1101 GDP-L-fucose synthetase (EC 1.1.1.271) Capsular heptose biosynthesis
fig|6666666.230106.peg.2106 CDS DS362244.1 73564 72518 -1 - 1047 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230106.peg.2107 CDS DS362244.1 74597 73614 -2 - 984 Capsular polysaccharide biosynthesis protein - none -
fig|6666666.230106.peg.2108 CDS DS362244.1 75800 74697 -2 - 1104 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster - none -
fig|6666666.230106.peg.2109 CDS DS362244.1 76798 75797 -1 - 1002 Beta-1,3-glucosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.230106.peg.2110 CDS DS362244.1 77599 76838 -1 - 762 Putative mannosyltransferase involved in polysaccharide biosynthesis - none -
fig|6666666.230106.peg.2111 CDS DS362244.1 78170 77604 -2 - 567 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.230106.peg.2112 CDS DS362244.1 79078 78191 -1 - 888 O-acetyl transferase (EC 2.3.1.-) - none -
fig|6666666.230106.peg.2113 CDS DS362244.1 80135 79236 -2 - 900 hypothetical protein - none -
fig|6666666.230106.peg.2114 CDS DS362244.1 80964 80161 -3 - 804 unknown - none -
fig|6666666.230106.peg.2115 CDS DS362244.1 82109 80961 -2 - 1149 NAD-dependent epimerase/dehydratase family protein - none -
fig|6666666.230106.peg.2116 CDS DS362244.1 83048 82122 -2 - 927 membrane protein, putative - none -
fig|6666666.230106.peg.2117 CDS DS362244.1 83683 83090 -1 - 594 FIG01201438: hypothetical protein - none -
fig|6666666.230106.peg.2118 CDS DS362244.1 84743 83691 -2 - 1053 hypothetical protein - none -
fig|6666666.230106.peg.2119 CDS DS362244.1 85757 84774 -2 - 984 hypothetical protein - none -
fig|6666666.230106.peg.2120 CDS DS362244.1 87532 85982 -1 - 1551 putative flippase - none -
fig|6666666.230106.peg.2121 CDS DS362244.1 88760 87516 -2 - 1245 hypothetical protein - none -
fig|6666666.230106.peg.2122 CDS DS362244.1 90137 88806 -2 - 1332 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.230106.peg.2123 CDS DS362244.1 90734 90579 -2 - 156 hypothetical protein - none -
fig|6666666.230106.peg.2124 CDS DS362244.1 90875 92971 2 + 2097 FIG00414498: hypothetical protein - none -
fig|6666666.230106.peg.2125 CDS DS362244.1 93228 92977 -3 - 252 hypothetical protein - none -
fig|6666666.230106.peg.2126 CDS DS362244.1 93513 94052 3 + 540 FIG00413911: hypothetical protein - none -
fig|6666666.230106.peg.2127 CDS DS362244.1 94144 94257 1 + 114 hypothetical protein - none -
fig|6666666.230106.peg.2128 CDS DS362244.1 94262 94711 2 + 450 N-acetylmuramoyl-L-alanine amidase - none -
fig|6666666.230106.peg.2129 CDS DS362244.1 95240 94701 -2 - 540 Capsular polysaccharide transcription antitermination protein, UpxY family - none -
fig|6666666.230106.peg.2130 CDS DS362244.1 97812 95419 -3 - 2394 Tyrosine-protein kinase Wzc (EC 2.7.10.2) CBSS-258594.1.peg.3339
fig|6666666.230106.peg.2131 CDS DS362244.1 98698 97829 -1 - 870 Polysaccharide export outer membrane protein - none -
fig|6666666.230106.peg.2132 CDS DS362244.1 100098 98695 -3 - 1404 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230106.peg.2133 CDS DS362244.1 101528 100602 -2 - 927 Tyrosine type site-specific recombinase, Mpi regulator - none -
fig|6666666.230106.peg.2134 CDS DS362244.1 102257 101673 -2 - 585 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230106.peg.2135 CDS DS362244.1 103694 102345 -2 - 1350 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230106.peg.2136 CDS DS362244.1 104275 104688 1 + 414 hypothetical protein - none -
fig|6666666.230106.peg.2137 CDS DS362244.1 104784 105431 3 + 648 DedA protein Colicin V and Bacteriocin Production Cluster;
DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.230106.peg.2138 CDS DS362244.1 105460 106107 1 + 648 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.230106.peg.2139 CDS DS362244.1 106120 107133 1 + 1014 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.230106.peg.2140 CDS DS362244.1 107227 108897 1 + 1671 putative membrane protein - none -
fig|6666666.230106.peg.2141 CDS DS362244.1 108952 110940 1 + 1989 Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.230106.peg.2142 CDS DS362244.1 112228 110942 -1 - 1287 FIG00405852: hypothetical protein - none -
fig|6666666.230106.peg.2143 CDS DS362244.1 113718 112237 -3 - 1482 N-acetylgalactosamine-6-sulfatase - none -
fig|6666666.230106.peg.2144 CDS DS362244.1 115498 113840 -1 - 1659 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.230106.peg.2145 CDS DS362244.1 117566 115599 -2 - 1968 putative ferric aerobactin receptor - none -
fig|6666666.230106.peg.2146 CDS DS362244.1 118693 117587 -1 - 1107 GDP-L-fucose synthetase (EC 1.1.1.271) Capsular heptose biosynthesis
fig|6666666.230106.peg.2147 CDS DS362244.1 119766 118690 -3 - 1077 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) Capsular heptose biosynthesis
fig|6666666.230106.peg.2148 CDS DS362244.1 120095 119841 -2 - 255 Na+/H+-dicarboxylate symporter - none -
fig|6666666.230106.peg.2149 CDS DS362244.1 120675 120085 -3 - 591 Na+/H+-dicarboxylate symporter - none -
fig|6666666.230106.peg.2150 CDS DS362244.1 120798 122279 3 + 1482 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) Pentose phosphate pathway
fig|6666666.230106.peg.2151 CDS DS362244.1 122294 123793 2 + 1500 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.230106.peg.2152 CDS DS362244.1 123790 124506 1 + 717 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.230106.peg.2153 CDS DS362244.1 125542 124499 -1 - 1044 FIG00896814: hypothetical protein - none -
fig|6666666.230106.peg.2154 CDS DS362244.1 126286 125642 -1 - 645 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230106.peg.2155 CDS DS362244.1 127289 126603 -2 - 687 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.230106.peg.2156 CDS DS362244.1 128403 127702 -3 - 702 Two-component system response regulator - none -
fig|6666666.230106.peg.2157 CDS DS362244.1 129467 128400 -2 - 1068 putative two-component system sensor protein, no kinase domain - none -
fig|6666666.230106.peg.2158 CDS DS362244.1 129497 129625 2 + 129 hypothetical protein - none -
fig|6666666.230106.peg.2159 CDS DS362244.1 130933 129713 -1 - 1221 ABC transporter, permease protein - none -
fig|6666666.230106.peg.2160 CDS DS362244.1 131733 130987 -3 - 747 ABC transporter ATP-binding protein - none -
fig|6666666.230106.peg.2161 CDS DS362244.1 132978 131749 -3 - 1230 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.2162 CDS DS362244.1 134391 132991 -3 - 1401 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.2163 CDS DS362244.1 134707 134823 1 + 117 hypothetical protein - none -
fig|6666666.230106.peg.2164 CDS DS362244.1 134940 136514 3 + 1575 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.230106.peg.2165 CDS DS362244.1 136542 137690 3 + 1149 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.230106.peg.2166 CDS DS362244.1 138470 137766 -2 - 705 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.230106.peg.2167 CDS DS362244.1 139225 138551 -1 - 675 OmpA family outer membrane protein - none -
fig|6666666.230106.peg.2168 CDS DS362244.1 140654 139326 -2 - 1329 Na+ driven multidrug efflux pump - none -
fig|6666666.230106.peg.2169 CDS DS362244.1 142060 140687 -1 - 1374 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.230106.peg.2170 CDS DS362244.1 142860 142069 -3 - 792 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.230106.peg.2171 CDS DS362244.1 143657 142857 -2 - 801 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.230106.peg.2172 CDS DS362244.1 145053 143647 -3 - 1407 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.230106.peg.2173 CDS DS362244.1 145267 146028 1 + 762 Short chain dehydrogenase - none -
fig|6666666.230106.peg.2174 CDS DS362244.1 146129 148333 2 + 2205 Alpha-galactosidase (EC 3.2.1.22) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization
fig|6666666.230106.peg.2175 CDS DS362244.1 148888 150585 1 + 1698 ABC transporter ATP-binding protein - none -
fig|6666666.230106.peg.2176 CDS DS362244.1 150930 153557 3 + 2628 Thiamin-regulated outer membrane receptor Omr1 Thiamin biosynthesis
fig|6666666.230106.peg.2177 CDS DS362244.1 153599 156061 2 + 2463 hypothetical protein - none -
fig|6666666.230106.peg.2178 CDS DS362244.1 156159 157448 3 + 1290 putative endonuclease precursor - none -
fig|6666666.230106.peg.2179 CDS DS362244.1 157596 158933 3 + 1338 ATP-dependent RNA helicase - none -
fig|6666666.230106.peg.2180 CDS DS362244.1 159208 160275 1 + 1068 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.230106.peg.2181 CDS DS362244.1 160386 161306 3 + 921 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.230106.peg.2182 CDS DS362244.1 161410 162657 1 + 1248 FIG008208: hypothetical protein - none -
fig|6666666.230106.peg.2183 CDS DS362244.1 162842 163363 2 + 522 Iron-sulfur flavoprotein - none -
fig|6666666.230106.peg.2184 CDS DS362244.1 163382 163783 2 + 402 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.230106.peg.2185 CDS DS362244.1 163848 164030 3 + 183 FIG00406415: hypothetical protein - none -
fig|6666666.230106.peg.2186 CDS DS362244.1 164140 165480 1 + 1341 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230106.peg.2187 CDS DS362244.1 166634 165477 -2 - 1158 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.230106.peg.2188 CDS DS362244.1 167211 167714 3 + 504 hypothetical protein - none -
fig|6666666.230106.peg.2189 CDS DS362244.1 167692 167817 1 + 126 hypothetical protein - none -
fig|6666666.230106.peg.2190 CDS DS362244.1 168055 168216 1 + 162 hypothetical protein - none -
fig|6666666.230106.peg.2191 CDS DS362244.1 168520 169116 1 + 597 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.230106.peg.2192 CDS DS362244.1 169274 170398 2 + 1125 Type II restriction enzyme HpaII (EC 3.1.21.4) - none -
fig|6666666.230106.peg.2193 CDS DS362244.1 170463 171026 3 + 564 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.230106.peg.2194 CDS DS362244.1 173468 171138 -2 - 2331 FIG00413484: hypothetical protein - none -
fig|6666666.230106.peg.2195 CDS DS362244.1 174067 173699 -1 - 369 Transcriptional regulator, GntR family - none -
fig|6666666.230106.peg.2196 CDS DS362244.1 174865 174071 -1 - 795 FIG00417121: hypothetical protein - none -
fig|6666666.230106.peg.2197 CDS DS362244.1 175686 174862 -3 - 825 ABC transporter, ATP-binding protein - none -
fig|6666666.230106.peg.2198 CDS DS362244.1 176466 175804 -3 - 663 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.230106.peg.2199 CDS DS362244.1 179315 176466 -2 - 2850 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.230106.peg.2200 CDS DS362244.1 179985 179347 -3 - 639 Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis Glutathione: Non-redox reactions
fig|6666666.230106.peg.2201 CDS DS362244.1 180621 180001 -3 - 621 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.230106.peg.2202 CDS DS362244.1 181525 180659 -1 - 867 FIG00936355: hypothetical protein - none -
fig|6666666.230106.peg.2203 CDS DS362244.1 181807 181637 -1 - 171 hypothetical protein - none -
fig|6666666.230106.peg.2204 CDS DS362244.1 182146 184362 1 + 2217 TonB-dependent outer membrane receptor - none -
fig|6666666.230106.peg.2205 CDS DS362244.1 184391 184702 2 + 312 Possible exported heavy-metal binding protein - none -
fig|6666666.230106.peg.2206 CDS DS362244.1 184773 186467 3 + 1695 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.230106.peg.2207 CDS DS362244.1 187312 186479 -1 - 834 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.2208 CDS DS362244.1 187462 188094 1 + 633 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.230106.peg.2209 CDS DS362244.1 188058 188681 3 + 624 Acyl carrier protein phosphodiesterase (EC 3.1.4.14) Fatty Acid Biosynthesis FASII
fig|6666666.230106.peg.2210 CDS DS362244.1 189648 188815 -3 - 834 DnaD domain protein - none -
fig|6666666.230106.peg.2211 CDS DS362244.1 190004 189723 -2 - 282 FIG00413928: hypothetical protein - none -
fig|6666666.230106.peg.2212 CDS DS362244.1 191233 191769 1 + 537 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230106.peg.2213 CDS DS362244.1 191893 192330 1 + 438 UpdZ protein - none -
fig|6666666.230106.peg.2214 CDS DS362244.1 192554 193708 2 + 1155 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) N-linked Glycosylation in Bacteria
fig|6666666.230106.peg.2215 CDS DS362244.1 193759 194982 1 + 1224 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) - none -
fig|6666666.230106.peg.2216 CDS DS362244.1 194982 195623 3 + 642 4-amino-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) acetyltrasferase N-linked Glycosylation in Bacteria
fig|6666666.230106.peg.2217 CDS DS362244.1 195620 196459 2 + 840 hypothetical protein - none -
fig|6666666.230106.peg.2218 CDS DS362244.1 196463 197512 2 + 1050 N-acetylneuraminate synthase (EC 2.5.1.56) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230106.peg.2219 CDS DS362244.1 197491 198195 1 + 705 N-Acetylneuraminate cytidylyltransferase (EC 2.7.7.43) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230106.peg.2220 CDS DS362244.1 198775 199821 1 + 1047 D-glycero-D-manno-heptose 1-phosphate guanosyltransferase Capsular heptose biosynthesis
fig|6666666.230106.peg.2221 CDS DS362244.1 199823 201136 2 + 1314 hypothetical protein - none -
fig|6666666.230106.peg.2222 CDS DS362244.1 201145 202584 1 + 1440 Polysaccharide biosynthesis protein - none -
fig|6666666.230106.peg.2223 CDS DS362244.1 202562 203872 2 + 1311 hypothetical protein - none -
fig|6666666.230106.peg.2224 CDS DS362244.1 203882 204598 2 + 717 acetyltransferase, CysE/LacA/LpxA/NodL family - none -
fig|6666666.230106.peg.2225 CDS DS362244.1 204610 205740 1 + 1131 hypothetical protein - none -
fig|6666666.230106.peg.2226 CDS DS362244.1 206656 206000 -1 - 657 putative transposable insertion element - none -
fig|6666666.230106.peg.2227 CDS DS362244.1 206721 207893 3 + 1173 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230106.peg.2228 CDS DS362244.1 207925 209148 1 + 1224 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.230106.peg.2229 CDS DS362244.1 209229 210311 3 + 1083 putative glycosyltransferase - none -
fig|6666666.230106.peg.2230 CDS DS362244.1 210723 211505 3 + 783 glycosyl transferase, group 1/2 family protein - none -
fig|6666666.230106.peg.2231 CDS DS362244.1 212145 212924 3 + 780 Colanic acid biosynthesis glycosyl transferase WcaE - none -
fig|6666666.230106.peg.2232 CDS DS362244.1 212926 214026 1 + 1101 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) Capsular heptose biosynthesis
fig|6666666.230106.peg.2233 CDS DS362244.1 214037 214486 2 + 450 GDP-L-fucose synthetase (EC 1.1.1.271) Capsular heptose biosynthesis
fig|6666666.230106.peg.2234 CDS DS362244.1 214479 215252 3 + 774 GDP-L-fucose synthetase (EC 1.1.1.271) Capsular heptose biosynthesis
fig|6666666.230106.peg.2235 CDS DS362244.1 215820 215707 -3 - 114 hypothetical protein - none -
fig|6666666.230106.peg.2236 CDS DS362244.1 216033 216173 3 + 141 hypothetical protein - none -
fig|6666666.230106.peg.2237 CDS DS362244.1 216194 216322 2 + 129 Mobile element protein - none -
fig|6666666.230106.peg.2238 CDS DS362244.1 216409 216588 1 + 180 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) Capsular heptose biosynthesis
fig|6666666.230106.peg.2239 CDS DS362244.1 216766 216882 1 + 117 hypothetical protein - none -
fig|6666666.230106.peg.2240 CDS DS362244.1 217218 218198 3 + 981 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.230106.peg.2241 CDS DS362244.1 218250 219200 3 + 951 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230106.peg.2242 CDS DS362244.1 219407 219907 2 + 501 putative non-specific DNA-binding protein - none -
fig|6666666.230106.peg.2243 CDS DS362244.1 220189 222651 1 + 2463 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.230106.peg.2244 CDS DS362244.1 222697 223434 1 + 738 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.230106.peg.2245 CDS DS362244.1 223434 223679 3 + 246 FIG00409633: hypothetical protein - none -
fig|6666666.230106.peg.2246 CDS DS362244.1 223806 225071 3 + 1266 Manganese transport protein MntH - none -
fig|6666666.230106.peg.2247 CDS DS362244.1 225104 225868 2 + 765 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.230106.peg.2248 CDS DS362244.1 225874 226338 1 + 465 FIG00406685: hypothetical protein - none -
fig|6666666.230106.peg.2249 CDS DS362244.1 226489 226689 1 + 201 FIG00404895: hypothetical protein - none -
fig|6666666.230106.peg.2250 CDS DS362244.1 226808 228595 2 + 1788 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.230106.peg.2251 CDS DS362244.1 228635 229954 2 + 1320 Na+/H+ antiporter NhaA type NhaA, NhaD and Sodium-dependent phosphate transporters
fig|6666666.230106.peg.2252 CDS DS362244.1 230146 232425 1 + 2280 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.2253 CDS DS362244.1 232534 235935 1 + 3402 OmpA-related protein - none -
fig|6666666.230106.peg.2254 CDS DS362244.1 237120 236035 -3 - 1086 FIG00415799: hypothetical protein - none -
fig|6666666.230106.peg.2255 CDS DS362244.1 238086 237130 -3 - 957 glycerate dehydrogenase - none -
fig|6666666.230106.peg.2256 CDS DS362244.1 239382 238177 -3 - 1206 ATPase, AAA family - none -
fig|6666666.230106.peg.2257 CDS DS362244.1 242046 239461 -3 - 2586 FIG00937290: hypothetical protein - none -
fig|6666666.230106.peg.2258 CDS DS362244.1 242233 242087 -1 - 147 hypothetical protein - none -
fig|6666666.230106.peg.2259 CDS DS362244.1 243440 242346 -2 - 1095 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230106.peg.2260 CDS DS362244.1 243593 244219 2 + 627 FIG00405553: hypothetical protein - none -
fig|6666666.230106.peg.2261 CDS DS362244.1 247311 244408 -3 - 2904 FIG00403256: hypothetical protein - none -
fig|6666666.230106.peg.2262 CDS DS362244.1 247585 248088 1 + 504 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.2263 CDS DS362244.1 248232 250010 3 + 1779 Pyruvate carboxylase (EC 6.4.1.1) / Biotin carboxyl carrier protein Fatty Acid Biosynthesis FASII
fig|6666666.230106.peg.2264 CDS DS362244.1 252724 250034 -1 - 2691 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.2265 CDS DS362244.1 253931 252741 -2 - 1191 Glycosyl transferase, group 2 family protein - none -
fig|6666666.230106.peg.2266 CDS DS362244.1 253944 254063 3 + 120 hypothetical protein - none -
fig|6666666.230106.peg.2267 CDS DS362244.1 255381 254179 -3 - 1203 Outer membrane protein/protective antigen OMA87 - none -
fig|6666666.230106.peg.2268 CDS DS362244.1 255531 255415 -3 - 117 hypothetical protein - none -
fig|6666666.230106.peg.2269 CDS DS362244.1 255541 256941 1 + 1401 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.230106.peg.2270 CDS DS362244.1 257046 258518 3 + 1473 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230106.peg.2271 CDS DS362244.1 258572 259741 2 + 1170 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230106.peg.2272 CDS DS362244.1 259756 260445 1 + 690 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230106.peg.2273 CDS DS362244.1 260450 261088 2 + 639 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230106.peg.2274 CDS DS362244.1 261202 261828 1 + 627 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230106.peg.2275 CDS DS362244.1 261852 263120 3 + 1269 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230106.peg.2276 CDS DS362244.1 264617 263385 -2 - 1233 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.230106.peg.2277 CDS DS362244.1 265493 264639 -2 - 855 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.230106.peg.2278 CDS DS362244.1 269017 265595 -1 - 3423 Exonuclease SbcC DNA repair, bacterial;
Rad50-Mre11 DNA repair cluster
fig|6666666.230106.peg.2279 CDS DS362244.1 270244 269033 -1 - 1212 Exonuclease SbcD DNA repair, bacterial;
Rad50-Mre11 DNA repair cluster
fig|6666666.230106.peg.2280 CDS DS362244.1 270901 270272 -1 - 630 hypothetical protein - none -
fig|6666666.230106.peg.2281 CDS DS362244.1 271203 272255 3 + 1053 FIG00415761: hypothetical protein - none -
fig|6666666.230106.peg.2282 CDS DS362244.1 272418 272678 3 + 261 FIG00408424: hypothetical protein - none -
fig|6666666.230106.peg.2283 CDS DS362244.1 272683 273564 1 + 882 aldose epimerase family protein - none -
fig|6666666.230106.peg.2284 CDS DS362244.1 273670 274812 1 + 1143 Protein AraJ precursor L-Arabinose utilization
fig|6666666.230106.peg.2285 CDS DS362244.1 274870 275304 1 + 435 FIG00403019: hypothetical protein - none -
fig|6666666.230106.peg.2286 CDS DS362244.1 275315 275728 2 + 414 hypothetical protein - none -
fig|6666666.230106.peg.2287 CDS DS362244.1 276705 275794 -3 - 912 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.230106.peg.2288 CDS DS362244.1 278187 276766 -3 - 1422 RNA methyltransferase, TrmA family - none -
fig|6666666.230106.peg.2289 CDS DS362244.1 278391 281111 3 + 2721 Pyruvate,phosphate dikinase (EC 2.7.9.1) Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230106.peg.2290 CDS DS362244.1 281279 282163 2 + 885 two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.2291 CDS DS362244.1 282755 282183 -2 - 573 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.230106.peg.2292 CDS DS362244.1 283542 282958 -3 - 585 Superoxide dismutase [Fe] (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.230106.peg.2293 CDS DS362244.1 283723 286077 1 + 2355 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.230106.peg.2294 CDS DS362244.1 286219 287364 1 + 1146 Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) Polyamine Metabolism
fig|6666666.230106.peg.2295 CDS DS362245.1 451 3429 1 + 2979 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.2296 CDS DS362245.1 3448 4941 1 + 1494 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.2297 CDS DS362245.1 5348 5094 -2 - 255 hypothetical protein - none -
fig|6666666.230106.peg.2298 CDS DS362245.1 5633 5355 -2 - 279 hypothetical protein - none -
fig|6666666.230106.peg.2299 CDS DS362245.1 5842 5633 -1 - 210 hypothetical protein - none -
fig|6666666.230106.peg.2300 CDS DS362245.1 7592 6372 -2 - 1221 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.230106.peg.2301 CDS DS362245.1 8106 10859 3 + 2754 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.2302 CDS DS362245.1 10877 12394 2 + 1518 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.2303 CDS DS362245.1 13047 12454 -3 - 594 MarC family integral membrane protein - none -
fig|6666666.230106.peg.2304 CDS DS362245.1 13870 13172 -1 - 699 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230106.peg.2305 CDS DS362245.1 14797 13958 -1 - 840 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1);
Phosphonate metabolism
fig|6666666.230106.peg.2306 CDS DS362245.1 15545 14871 -2 - 675 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.230106.peg.2307 CDS DS362245.1 16047 15559 -3 - 489 FIG00405769: hypothetical protein - none -
fig|6666666.230106.peg.2308 CDS DS362245.1 16212 16817 3 + 606 Thymidine kinase (EC 2.7.1.21) - none -
fig|6666666.230106.peg.2309 CDS DS362245.1 16840 17955 1 + 1116 Transporter - none -
fig|6666666.230106.peg.2310 CDS DS362245.1 18393 18635 3 + 243 Integrase - none -
fig|6666666.230106.peg.2311 CDS DS362245.1 18818 18702 -2 - 117 hypothetical protein - none -
fig|6666666.230106.peg.2312 CDS DS362245.1 19271 19062 -2 - 210 Tetracycline resistance element mobilization regulatory protein rteC - none -
fig|6666666.230106.peg.2313 CDS DS362245.1 20070 19297 -3 - 774 GCN5-related N-acetyltransferase - none -
fig|6666666.230106.peg.2314 CDS DS362245.1 20918 20079 -2 - 840 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.2315 CDS DS362245.1 22434 21058 -3 - 1377 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230106.peg.2316 CDS DS362245.1 22899 23015 3 + 117 hypothetical protein - none -
fig|6666666.230106.peg.2317 CDS DS362245.1 23280 23071 -3 - 210 hypothetical protein - none -
fig|6666666.230106.peg.2318 CDS DS362245.1 23964 23515 -3 - 450 hypothetical protein - none -
fig|6666666.230106.peg.2319 CDS DS362245.1 24950 24408 -2 - 543 hypothetical protein - none -
fig|6666666.230106.peg.2320 CDS DS362245.1 25079 25321 2 + 243 FIG00404225: hypothetical protein - none -
fig|6666666.230106.peg.2321 CDS DS362245.1 26318 25449 -2 - 870 Small-conductance mechanosensitive channel - none -
fig|6666666.230106.peg.2322 CDS DS362245.1 26554 28866 1 + 2313 Thiamin-regulated outer membrane receptor Omr1 Thiamin biosynthesis
fig|6666666.230106.peg.2323 CDS DS362245.1 28866 29516 3 + 651 Predicted thiamin transporter PnuT Thiamin biosynthesis
fig|6666666.230106.peg.2324 CDS DS362245.1 29524 30201 1 + 678 Thiamin pyrophosphokinase (EC 2.7.6.2) Thiamin biosynthesis
fig|6666666.230106.peg.2325 CDS DS362245.1 31069 30161 -1 - 909 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.230106.peg.2326 CDS DS362245.1 31139 31306 2 + 168 hypothetical protein - none -
fig|6666666.230106.peg.2327 CDS DS362245.1 31291 31614 1 + 324 hypothetical protein - none -
fig|6666666.230106.peg.2328 CDS DS362245.1 33401 32100 -2 - 1302 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.230106.peg.2329 CDS DS362245.1 34731 33472 -3 - 1260 Predicted functional analog of homoserine kinase (EC 2.7.1.-) Threonine and Homoserine Biosynthesis
fig|6666666.230106.peg.2330 CDS DS362245.1 37185 34753 -3 - 2433 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230106.peg.2331 CDS DS362245.1 37688 38671 2 + 984 L-asparaginase I, cytoplasmic (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.2332 CDS DS362245.1 39224 38682 -2 - 543 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.230106.peg.2333 CDS DS362245.1 39346 40713 1 + 1368 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.230106.peg.2334 CDS DS362245.1 40719 42341 3 + 1623 NAD-utilizing dehydrogenases - none -
fig|6666666.230106.peg.2335 CDS DS362245.1 42589 46440 1 + 3852 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.2336 CDS DS362245.1 46530 47141 3 + 612 LuxR family transcriptional regulator - none -
fig|6666666.230106.peg.2337 CDS DS362245.1 47408 49864 2 + 2457 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.2338 CDS DS362245.1 50665 50378 -1 - 288 FIG00414669: hypothetical protein - none -
fig|6666666.230106.peg.2339 CDS DS362245.1 51797 50742 -2 - 1056 FIG00406392: hypothetical protein - none -
fig|6666666.230106.peg.2340 CDS DS362245.1 53704 51839 -1 - 1866 Putative collagenase - none -
fig|6666666.230106.peg.2341 CDS DS362245.1 54640 53723 -1 - 918 Homoserine O-succinyltransferase (EC 2.3.1.46) Methionine Biosynthesis
fig|6666666.230106.peg.2342 CDS DS362245.1 55035 54889 -3 - 147 hypothetical protein - none -
fig|6666666.230106.peg.2343 CDS DS362245.1 54980 56887 2 + 1908 FIG00414387: hypothetical protein - none -
fig|6666666.230106.peg.2344 CDS DS362245.1 56979 57932 3 + 954 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.230106.peg.2345 CDS DS362245.1 58005 59132 3 + 1128 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.230106.peg.2346 CDS DS362245.1 59218 60597 1 + 1380 Signal peptidase-like protein Heat shock dnaK gene cluster extended
fig|6666666.230106.peg.2347 CDS DS362245.1 60575 61060 2 + 486 GldH - none -
fig|6666666.230106.peg.2348 CDS DS362245.1 62448 61588 -3 - 861 Mobile element protein - none -
fig|6666666.230106.peg.2349 CDS DS362245.1 62753 62571 -2 - 183 hypothetical protein - none -
fig|6666666.230106.peg.2350 CDS DS362245.1 64448 63033 -2 - 1416 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Bacterial cell division cluster;
Peptidoglycan Biosynthesis
fig|6666666.230106.peg.2351 CDS DS362245.1 66447 64582 -3 - 1866 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
Bacterial cell division cluster;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.230106.peg.2352 CDS DS362245.1 66973 66470 -1 - 504 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.230106.peg.2353 CDS DS362245.1 67814 67080 -2 - 735 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.230106.peg.2354 CDS DS362245.1 68947 67925 -1 - 1023 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster
fig|6666666.230106.peg.2355 CDS DS362245.1 70593 69070 -3 - 1524 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.230106.peg.2356 CDS DS362245.1 72775 70754 -1 - 2022 Endothelin-converting enzyme 1 precursor (EC 3.4.24.71) - none -
fig|6666666.230106.peg.2357 CDS DS362245.1 74772 72811 -3 - 1962 ABC transporter ATP-binding protein - none -
fig|6666666.230106.peg.2358 CDS DS362245.1 76370 74877 -2 - 1494 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.2359 CDS DS362245.1 76591 77439 1 + 849 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.2360 CDS DS362245.1 78326 77514 -2 - 813 Slr1117 protein - none -
fig|6666666.230106.peg.2361 CDS DS362245.1 78859 78524 -1 - 336 FIG00898702: hypothetical protein - none -
fig|6666666.230106.peg.2362 CDS DS362245.1 80180 79206 -2 - 975 hypothetical protein - none -
fig|6666666.230106.peg.2363 CDS DS362245.1 83483 80187 -2 - 3297 hypothetical protein - none -
fig|6666666.230106.peg.2364 CDS DS362245.1 84510 83503 -3 - 1008 hypothetical protein - none -
fig|6666666.230106.peg.2365 CDS DS362245.1 85468 84530 -1 - 939 FIG00407079: hypothetical protein - none -
fig|6666666.230106.peg.2366 CDS DS362245.1 86721 85594 -3 - 1128 FIG00404199: hypothetical protein - none -
fig|6666666.230106.peg.2367 CDS DS362245.1 88258 86795 -1 - 1464 Immunoreactive 53 kDa antigen PG123 - none -
fig|6666666.230106.peg.2368 CDS DS362245.1 88805 88272 -2 - 534 FIG00415902: hypothetical protein - none -
fig|6666666.230106.peg.2369 CDS DS362245.1 90204 89284 -3 - 921 Integrase protein - none -
fig|6666666.230106.peg.2370 CDS DS362245.1 91816 90905 -1 - 912 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.2371 CDS DS362245.1 94296 91942 -3 - 2355 FIG00896779: hypothetical protein - none -
fig|6666666.230106.peg.2372 CDS DS362245.1 98823 94306 -3 - 4518 FIG00938273: hypothetical protein - none -
fig|6666666.230106.peg.2373 CDS DS362245.1 101258 98964 -2 - 2295 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.2374 CDS DS362245.1 102540 101263 -3 - 1278 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog Multidrug Resistance Efflux Pumps
fig|6666666.230106.peg.2375 CDS DS362245.1 103845 102607 -3 - 1239 putative zinc protease - none -
fig|6666666.230106.peg.2376 CDS DS362245.1 104709 103870 -3 - 840 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Queuosine-Archaeosine Biosynthesis
fig|6666666.230106.peg.2377 CDS DS362245.1 104803 106230 1 + 1428 RteB, two-component system response regulator - none -
fig|6666666.230106.peg.2378 CDS DS362245.1 106453 106635 1 + 183 hypothetical protein - none -
fig|6666666.230106.peg.2379 CDS DS362245.1 109259 106722 -2 - 2538 ApeH acylamino-acid-releasing enzyme (EC 3.4.19.1) - none -
fig|6666666.230106.peg.2380 CDS DS362245.1 109941 109270 -3 - 672 Similar to tRNA pseudouridine synthase C, group TruC1 RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.230106.peg.2381 CDS DS362245.1 110780 110034 -2 - 747 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.230106.peg.2382 CDS DS362245.1 111396 110812 -3 - 585 Transcriptional regulator, TetR family - none -
fig|6666666.230106.peg.2383 CDS DS362245.1 111795 111959 3 + 165 hypothetical protein - none -
fig|6666666.230106.peg.2384 CDS DS362245.1 113659 112349 -1 - 1311 Anaerobic C4-dicarboxylate transporter - none -
fig|6666666.230106.peg.2385 CDS DS362245.1 114545 113712 -2 - 834 FIG00402879: hypothetical protein - none -
fig|6666666.230106.peg.2386 CDS DS362245.1 114926 114558 -2 - 369 Transcriptional regulator, GntR family - none -
fig|6666666.230106.peg.2387 CDS DS362245.1 115759 114929 -1 - 831 FIG00403434: hypothetical protein - none -
fig|6666666.230106.peg.2388 CDS DS362245.1 116610 115759 -3 - 852 ABC transporter, ATP-binding protein - none -
fig|6666666.230106.peg.2389 CDS DS362245.1 116851 117780 1 + 930 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.2390 CDS DS362245.1 119273 117828 -2 - 1446 Tetratricopeptide repeat family protein - none -
fig|6666666.230106.peg.2391 CDS DS362245.1 120229 119279 -1 - 951 Putative phosphate ABC transporter, phosphate-binding component - none -
fig|6666666.230106.peg.2392 CDS DS362245.1 121056 120241 -3 - 816 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.230106.peg.2393 CDS DS362245.1 121735 121085 -1 - 651 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.230106.peg.2394 CDS DS362245.1 122380 121775 -1 - 606 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.230106.peg.2395 CDS DS362245.1 123160 122474 -1 - 687 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.230106.peg.2396 CDS DS362245.1 123932 123486 -2 - 447 FIG00403079: hypothetical protein - none -
fig|6666666.230106.peg.2397 CDS DS362245.1 129922 130062 1 + 141 hypothetical protein - none -
fig|6666666.230106.peg.2398 CDS DS362245.1 130794 130633 -3 - 162 hypothetical protein - none -
fig|6666666.230106.peg.2399 CDS DS362245.1 130796 132421 2 + 1626 Protease IV - none -
fig|6666666.230106.peg.2400 CDS DS362245.1 132422 133552 2 + 1131 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) - none -
fig|6666666.230106.peg.2401 CDS DS362245.1 133536 134300 3 + 765 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions
fig|6666666.230106.peg.2402 CDS DS362245.1 134307 135356 3 + 1050 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.230106.peg.2403 CDS DS362245.1 135851 135729 -2 - 123 hypothetical protein - none -
fig|6666666.230106.peg.2404 CDS DS362245.1 136038 137273 3 + 1236 Mobile element protein - none -
fig|6666666.230106.peg.2405 CDS DS362245.1 138741 137452 -3 - 1290 Mobile element protein - none -
fig|6666666.230106.peg.2406 CDS DS362245.1 138901 139023 1 + 123 hypothetical protein - none -
fig|6666666.230106.peg.2407 CDS DS362245.1 140830 139463 -1 - 1368 hypothetical protein - none -
fig|6666666.230106.peg.2408 CDS DS362245.1 141098 142303 2 + 1206 Mobile element protein - none -
fig|6666666.230106.peg.2409 CDS DS362245.1 143613 142300 -3 - 1314 Mobile element protein - none -
fig|6666666.230106.peg.2410 CDS DS362245.1 144386 144126 -2 - 261 hypothetical protein - none -
fig|6666666.230106.peg.2411 CDS DS362245.1 144919 144725 -1 - 195 hypothetical protein - none -
fig|6666666.230106.peg.2412 CDS DS362245.1 144946 145242 1 + 297 hypothetical protein - none -
fig|6666666.230106.peg.2413 CDS DS362245.1 145227 146369 3 + 1143 FIG00898363: hypothetical protein - none -
fig|6666666.230106.peg.2414 CDS DS362245.1 146373 147260 3 + 888 hypothetical protein - none -
fig|6666666.230106.peg.2415 CDS DS362245.1 147330 147581 3 + 252 hypothetical protein - none -
fig|6666666.230106.peg.2416 CDS DS362245.1 147632 148042 2 + 411 FIG00898764: hypothetical protein - none -
fig|6666666.230106.peg.2417 CDS DS362245.1 148165 148776 1 + 612 FIG00897967: hypothetical protein - none -
fig|6666666.230106.peg.2418 CDS DS362245.1 148773 149072 3 + 300 hypothetical protein - none -
fig|6666666.230106.peg.2419 CDS DS362245.1 149048 149257 2 + 210 hypothetical protein - none -
fig|6666666.230106.peg.2420 CDS DS362245.1 149271 150290 3 + 1020 FIG00896987: hypothetical protein - none -
fig|6666666.230106.peg.2421 CDS DS362245.1 150301 151002 1 + 702 hypothetical protein - none -
fig|6666666.230106.peg.2422 CDS DS362245.1 151004 151714 2 + 711 FIG00899242: hypothetical protein - none -
fig|6666666.230106.peg.2423 CDS DS362245.1 152117 151773 -2 - 345 FIG00897117: hypothetical protein - none -
fig|6666666.230106.peg.2424 CDS DS362245.1 152116 152256 1 + 141 hypothetical protein - none -
fig|6666666.230106.peg.2425 CDS DS362245.1 152448 152738 3 + 291 FIG00898875: hypothetical protein - none -
fig|6666666.230106.peg.2426 CDS DS362245.1 152891 152775 -2 - 117 hypothetical protein - none -
fig|6666666.230106.peg.2427 CDS DS362245.1 153020 153298 2 + 279 FIG00411855: hypothetical protein - none -
fig|6666666.230106.peg.2428 CDS DS362245.1 153285 154106 3 + 822 FIG00896576: hypothetical protein - none -
fig|6666666.230106.peg.2429 CDS DS362245.1 154093 154833 1 + 741 Type I restriction enzyme, M subunit - none -
fig|6666666.230106.peg.2430 CDS DS362245.1 154866 156101 3 + 1236 FIG00899322: hypothetical protein - none -
fig|6666666.230106.peg.2431 CDS DS362245.1 156114 156995 3 + 882 Phage protein - none -
fig|6666666.230106.peg.2432 CDS DS362245.1 157024 158178 1 + 1155 FIG00896816: hypothetical protein - none -
fig|6666666.230106.peg.2433 CDS DS362245.1 158705 158247 -2 - 459 Lysozyme-related protein - none -
fig|6666666.230106.peg.2434 CDS DS362245.1 159184 158723 -1 - 462 Conjugative transposon protein TraQ Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2435 CDS DS362245.1 159793 159206 -1 - 588 Conjugative transposon protein TraO Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2436 CDS DS362245.1 160704 159790 -3 - 915 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2437 CDS DS362245.1 162055 160754 -1 - 1302 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2438 CDS DS362245.1 162311 162012 -2 - 300 Conjugative transposon protein TraL Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2439 CDS DS362245.1 162931 162308 -1 - 624 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2440 CDS DS362245.1 164067 163054 -3 - 1014 Conjugative transposon protein TraJ Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2441 CDS DS362245.1 164699 164070 -2 - 630 Conjugative transposon protein TraI Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2442 CDS DS362245.1 165034 164696 -1 - 339 Conjugative transposon protein TraH Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2443 CDS DS362245.1 167583 165049 -3 - 2535 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2444 CDS DS362245.1 167906 167580 -2 - 327 Conjugative transposon protein TraF Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2445 CDS DS362245.1 168214 167912 -1 - 303 Conjugative transposon protein TraE Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2446 CDS DS362245.1 168855 169865 3 + 1011 hypothetical protein - none -
fig|6666666.230106.peg.2447 CDS DS362245.1 169934 171037 2 + 1104 hypothetical protein - none -
fig|6666666.230106.peg.2448 CDS DS362245.1 172172 171504 -2 - 669 Conjugative transposon protein TraD Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2449 CDS DS362245.1 172609 172160 -1 - 450 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2450 CDS DS362245.1 173412 172618 -3 - 795 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2451 CDS DS362245.1 173686 173570 -1 - 117 hypothetical protein - none -
fig|6666666.230106.peg.2452 CDS DS362245.1 174024 173851 -3 - 174 hypothetical protein - none -
fig|6666666.230106.peg.2453 CDS DS362245.1 174131 174559 2 + 429 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2454 CDS DS362245.1 174568 175791 1 + 1224 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2455 CDS DS362245.1 175828 177864 1 + 2037 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2456 CDS DS362245.1 178320 178580 3 + 261 hypothetical protein - none -
fig|6666666.230106.peg.2457 CDS DS362245.1 179875 178586 -1 - 1290 Response regulator of zinc sigma-54-dependent two-component system Zinc resistance
fig|6666666.230106.peg.2458 CDS DS362245.1 182150 179835 -2 - 2316 hypothetical protein - none -
fig|6666666.230106.peg.2459 CDS DS362245.1 184801 182540 -1 - 2262 helicase, putative - none -
fig|6666666.230106.peg.2460 CDS DS362245.1 185294 185160 -2 - 135 hypothetical protein - none -
fig|6666666.230106.peg.2461 CDS DS362245.1 185741 185571 -2 - 171 hypothetical protein - none -
fig|6666666.230106.peg.2462 CDS DS362245.1 187190 186030 -2 - 1161 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230106.peg.2463 CDS DS362245.1 187900 187202 -1 - 699 N-acetylmannosaminyltransferase (EC 2.4.1.187) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230106.peg.2464 CDS DS362245.1 189106 187913 -1 - 1194 FIG00936240: hypothetical protein - none -
fig|6666666.230106.peg.2465 CDS DS362245.1 190218 190084 -3 - 135 Maltose O-acetyltransferase (EC 2.3.1.79) Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.2466 CDS DS362245.1 191675 190494 -2 - 1182 hypothetical protein - none -
fig|6666666.230106.peg.2467 CDS DS362245.1 192888 191707 -3 - 1182 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230106.peg.2468 CDS DS362245.1 193293 192895 -3 - 399 Tryptophan synthase beta chain like (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.230106.peg.2469 CDS DS362245.1 194454 193300 -3 - 1155 Capsular polysaccharide synthesis enzyme Cap5F - none -
fig|6666666.230106.peg.2470 CDS DS362245.1 195339 194629 -3 - 711 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) N-linked Glycosylation in Bacteria
fig|6666666.230106.peg.2471 CDS DS362245.1 195355 195636 1 + 282 hypothetical protein - none -
fig|6666666.230106.peg.2472 CDS DS362245.1 196877 195708 -2 - 1170 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230106.peg.2473 CDS DS362245.1 198086 196884 -2 - 1203 hypothetical protein - none -
fig|6666666.230106.peg.2474 CDS DS362245.1 199348 198074 -1 - 1275 O-antigen flippase Wzx - none -
fig|6666666.230106.peg.2475 CDS DS362245.1 201426 200236 -3 - 1191 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.230106.peg.2476 CDS DS362245.1 202227 201523 -3 - 705 Protein-tyrosine-phosphatase (EC 3.1.3.48) - none -
fig|6666666.230106.peg.2477 CDS DS362245.1 204619 202241 -1 - 2379 Tyrosine-protein kinase Wzc (EC 2.7.10.2) CBSS-258594.1.peg.3339
fig|6666666.230106.peg.2478 CDS DS362245.1 205455 204661 -3 - 795 Polysaccharide export outer membrane protein - none -
fig|6666666.230106.peg.2479 CDS DS362245.1 206588 205482 -2 - 1107 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230106.peg.2480 CDS DS362245.1 207032 206613 -2 - 420 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230106.peg.2481 CDS DS362245.1 208872 207658 -3 - 1215 Mobile element protein - none -
fig|6666666.230106.peg.2482 CDS DS362245.1 209630 209448 -2 - 183 hypothetical protein - none -
fig|6666666.230106.peg.2483 CDS DS362245.1 209725 211560 1 + 1836 FIG00936597: hypothetical protein - none -
fig|6666666.230106.peg.2484 CDS DS362245.1 211582 211890 1 + 309 hypothetical protein - none -
fig|6666666.230106.peg.2485 CDS DS362245.1 212015 213724 2 + 1710 DNA topoisomerase III, Bacteroidales-type (EC 5.99.1.2) DNA topoisomerases, Type I, ATP-independent
fig|6666666.230106.peg.2486 CDS DS362245.1 214036 214248 1 + 213 hypothetical protein - none -
fig|6666666.230106.peg.2487 CDS DS362245.1 214522 215568 1 + 1047 hypothetical protein - none -
fig|6666666.230106.peg.2488 CDS DS362245.1 215588 215809 2 + 222 FIG00408893: hypothetical protein - none -
fig|6666666.230106.peg.2489 CDS DS362245.1 215852 216979 2 + 1128 hypothetical protein - none -
fig|6666666.230106.peg.2490 CDS DS362245.1 217011 217712 3 + 702 hypothetical protein - none -
fig|6666666.230106.peg.2491 CDS DS362245.1 217709 218500 2 + 792 ThiF family protein, ubiquitin-activating enzyme - none -
fig|6666666.230106.peg.2492 CDS DS362245.1 219245 218523 -2 - 723 Maebl - none -
fig|6666666.230106.peg.2493 CDS DS362245.1 219592 219302 -1 - 291 hypothetical protein - none -
fig|6666666.230106.peg.2494 CDS DS362245.1 220301 220603 2 + 303 hypothetical protein - none -
fig|6666666.230106.peg.2495 CDS DS362245.1 222183 220885 -3 - 1299 Predicted ATPase (AAA+ superfamily) - none -
fig|6666666.230106.peg.2496 CDS DS362245.1 222212 222334 2 + 123 hypothetical protein - none -
fig|6666666.230106.peg.2497 CDS DS362245.1 222932 224176 2 + 1245 hypothetical protein - none -
fig|6666666.230106.peg.2498 CDS DS362245.1 224407 224727 1 + 321 hypothetical protein - none -
fig|6666666.230106.peg.2499 CDS DS362245.1 224816 225091 2 + 276 hypothetical protein - none -
fig|6666666.230106.peg.2500 CDS DS362245.1 225457 225230 -1 - 228 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230106.peg.2501 CDS DS362245.1 225985 226275 1 + 291 hypothetical protein - none -
fig|6666666.230106.peg.2502 CDS DS362245.1 226502 227155 2 + 654 Abortive infection protein AbiGII - none -
fig|6666666.230106.peg.2503 CDS DS362245.1 227241 227360 3 + 120 hypothetical protein - none -
fig|6666666.230106.peg.2504 CDS DS362245.1 228118 228882 1 + 765 transcriptional regulator - none -
fig|6666666.230106.peg.2505 CDS DS362245.1 229469 228885 -2 - 585 FIG00407655: hypothetical protein - none -
fig|6666666.230106.peg.2506 CDS DS362245.1 229597 231657 1 + 2061 FIG00403395: hypothetical protein - none -
fig|6666666.230106.peg.2507 CDS DS362245.1 232288 231668 -1 - 621 Chloramphenicol acetyltransferase (EC 2.3.1.28) - none -
fig|6666666.230106.peg.2508 CDS DS362245.1 233595 232303 -3 - 1293 BexA - none -
fig|6666666.230106.peg.2509 CDS DS362245.1 233583 233723 3 + 141 hypothetical protein - none -
fig|6666666.230106.peg.2510 CDS DS362245.1 234223 235140 1 + 918 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.230106.peg.2511 CDS DS362245.1 235207 236133 1 + 927 Transcription regulator [contains diacylglycerol kinase catalytic domain] - none -
fig|6666666.230106.peg.2512 CDS DS362245.1 236157 236957 3 + 801 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation
fig|6666666.230106.peg.2513 CDS DS362245.1 237061 239889 1 + 2829 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.230106.peg.2514 CDS DS362245.1 239916 241460 3 + 1545 FIG00406426: hypothetical protein - none -
fig|6666666.230106.peg.2515 CDS DS362245.1 241486 242289 1 + 804 ATP-binding protein - none -
fig|6666666.230106.peg.2516 CDS DS362245.1 242286 242798 3 + 513 Lipoprotein spr precursor - none -
fig|6666666.230106.peg.2517 CDS DS362245.1 242876 243760 2 + 885 FIG00404457: hypothetical protein - none -
fig|6666666.230106.peg.2518 CDS DS362245.1 244199 245725 2 + 1527 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.2519 CDS DS362245.1 248047 245804 -1 - 2244 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230106.peg.2520 CDS DS362245.1 249314 248343 -2 - 972 COG2152 predicted glycoside hydrolase - none -
fig|6666666.230106.peg.2521 CDS DS362245.1 250594 249338 -1 - 1257 AmpG protein, beta-lactamase induction signal transducer - none -
fig|6666666.230106.peg.2522 CDS DS362245.1 252940 250670 -1 - 2271 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230106.peg.2523 CDS DS362245.1 255095 253107 -2 - 1989 endo-beta-N-acetylglucosaminidase - none -
fig|6666666.230106.peg.2524 CDS DS362245.1 256282 255128 -1 - 1155 Patatin-like protein - none -
fig|6666666.230106.peg.2525 CDS DS362245.1 257305 256292 -1 - 1014 Endo-beta-N-acetylglucosaminidase F2 - none -
fig|6666666.230106.peg.2526 CDS DS362245.1 258917 257328 -2 - 1590 FIG00937161: hypothetical protein - none -
fig|6666666.230106.peg.2527 CDS DS362245.1 262252 258929 -1 - 3324 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.2528 CDS DS362245.1 264876 262618 -3 - 2259 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230106.peg.2529 CDS DS362245.1 265961 264960 -2 - 1002 Putative anti-sigma factor - none -
fig|6666666.230106.peg.2530 CDS DS362245.1 266554 265961 -1 - 594 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.2531 CDS DS362245.1 268773 266566 -3 - 2208 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230106.peg.2532 CDS DS362245.1 268971 270983 3 + 2013 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.230106.peg.2533 CDS DS362245.1 271210 271527 1 + 318 LSU ribosomal protein L21p CBSS-176279.3.peg.868
fig|6666666.230106.peg.2534 CDS DS362245.1 271706 271819 2 + 114 LSU ribosomal protein L27p CBSS-176279.3.peg.868
fig|6666666.230106.peg.2535 CDS DS362245.1 271961 273235 2 + 1275 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.230106.peg.2536 CDS DS362245.1 274084 273383 -1 - 702 two-component system response regulator protein - none -
fig|6666666.230106.peg.2537 CDS DS362245.1 275099 274086 -2 - 1014 putative two-component system sensor protein, no kinase domain - none -
fig|6666666.230106.peg.2538 CDS DS362245.1 275329 275105 -1 - 225 putative TonB-dependent receptor - none -
fig|6666666.230106.peg.2539 CDS DS362246.1 103 585 1 + 483 Mobile element protein - none -
fig|6666666.230106.peg.2540 CDS DS362246.1 861 1544 3 + 684 hypothetical protein - none -
fig|6666666.230106.peg.2541 CDS DS362246.1 1583 3061 2 + 1479 hypothetical protein - none -
fig|6666666.230106.peg.2542 CDS DS362246.1 3249 4031 3 + 783 hypothetical protein - none -
fig|6666666.230106.peg.2543 CDS DS362246.1 4044 4241 3 + 198 hypothetical protein - none -
fig|6666666.230106.peg.2544 CDS DS362246.1 4640 4443 -2 - 198 hypothetical protein - none -
fig|6666666.230106.peg.2545 CDS DS362246.1 5154 5354 3 + 201 hypothetical protein - none -
fig|6666666.230106.peg.2546 CDS DS362246.1 5607 6173 3 + 567 putative transcriptional regulator - none -
fig|6666666.230106.peg.2547 CDS DS362246.1 6197 6556 2 + 360 hypothetical protein - none -
fig|6666666.230106.peg.2548 CDS DS362246.1 6572 6913 2 + 342 hypothetical protein - none -
fig|6666666.230106.peg.2549 CDS DS362246.1 6969 10022 3 + 3054 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230106.peg.2550 CDS DS362246.1 10046 10342 2 + 297 hypothetical protein - none -
fig|6666666.230106.peg.2551 CDS DS362246.1 10402 10731 1 + 330 hypothetical protein - none -
fig|6666666.230106.peg.2552 CDS DS362246.1 10909 10778 -1 - 132 hypothetical protein - none -
fig|6666666.230106.peg.2553 CDS DS362246.1 11311 11895 1 + 585 hypothetical protein - none -
fig|6666666.230106.peg.2554 CDS DS362246.1 11885 12358 2 + 474 hypothetical protein - none -
fig|6666666.230106.peg.2555 CDS DS362246.1 12483 13601 3 + 1119 Prophage Clp protease-like protein cAMP signaling in bacteria
fig|6666666.230106.peg.2556 CDS DS362246.1 13619 14854 2 + 1236 hypothetical protein - none -
fig|6666666.230106.peg.2557 CDS DS362246.1 14866 15468 1 + 603 hypothetical protein - none -
fig|6666666.230106.peg.2558 CDS DS362246.1 15601 16491 1 + 891 hypothetical protein - none -
fig|6666666.230106.peg.2559 CDS DS362246.1 16500 17117 3 + 618 hypothetical protein - none -
fig|6666666.230106.peg.2560 CDS DS362246.1 17092 17376 1 + 285 hypothetical protein - none -
fig|6666666.230106.peg.2561 CDS DS362246.1 17369 17971 2 + 603 hypothetical protein - none -
fig|6666666.230106.peg.2562 CDS DS362246.1 17982 18194 3 + 213 hypothetical protein - none -
fig|6666666.230106.peg.2563 CDS DS362246.1 18207 19934 3 + 1728 hypothetical protein - none -
fig|6666666.230106.peg.2564 CDS DS362246.1 20816 21322 2 + 507 putative ribose phosphate pyrophosphokinase - none -
fig|6666666.230106.peg.2565 CDS DS362246.1 21342 21932 3 + 591 DNA repair protein RadC Bacterial cell division cluster;
DNA repair, bacterial
fig|6666666.230106.peg.2566 CDS DS362246.1 22137 22373 3 + 237 hypothetical protein - none -
fig|6666666.230106.peg.2567 CDS DS362246.1 22407 22814 3 + 408 hypothetical protein - none -
fig|6666666.230106.peg.2568 CDS DS362246.1 23130 23405 3 + 276 hypothetical protein - none -
fig|6666666.230106.peg.2569 CDS DS362246.1 23492 23608 2 + 117 hypothetical protein - none -
fig|6666666.230106.peg.2570 CDS DS362246.1 23605 23850 1 + 246 hypothetical protein - none -
fig|6666666.230106.peg.2571 CDS DS362246.1 23847 24146 3 + 300 hypothetical protein - none -
fig|6666666.230106.peg.2572 CDS DS362246.1 24261 24821 3 + 561 hypothetical protein - none -
fig|6666666.230106.peg.2573 CDS DS362246.1 24826 25305 1 + 480 hypothetical protein - none -
fig|6666666.230106.peg.2574 CDS DS362246.1 25299 26393 3 + 1095 hypothetical protein - none -
fig|6666666.230106.peg.2575 CDS DS362246.1 26403 26681 3 + 279 hypothetical protein - none -
fig|6666666.230106.peg.2576 CDS DS362246.1 26681 28036 2 + 1356 hypothetical protein - none -
fig|6666666.230106.peg.2577 CDS DS362246.1 28036 29070 1 + 1035 hypothetical protein - none -
fig|6666666.230106.peg.2578 CDS DS362246.1 29067 29855 3 + 789 hypothetical protein - none -
fig|6666666.230106.peg.2579 CDS DS362246.1 29852 30328 2 + 477 hypothetical protein - none -
fig|6666666.230106.peg.2580 CDS DS362246.1 30335 32269 2 + 1935 hypothetical protein - none -
fig|6666666.230106.peg.2581 CDS DS362246.1 32330 32476 2 + 147 hypothetical protein - none -
fig|6666666.230106.peg.2582 CDS DS362246.1 32697 35627 3 + 2931 hypothetical protein - none -
fig|6666666.230106.peg.2583 CDS DS362246.1 35652 36176 3 + 525 secretion activator protein, putative - none -
fig|6666666.230106.peg.2584 CDS DS362246.1 36268 36783 1 + 516 hypothetical protein - none -
fig|6666666.230106.peg.2585 CDS DS362246.1 36809 40270 2 + 3462 Phage tail length tape-measure protein Phage tail proteins;
Phage tail proteins 2
fig|6666666.230106.peg.2586 CDS DS362246.1 40267 42042 1 + 1776 hypothetical protein - none -
fig|6666666.230106.peg.2587 CDS DS362246.1 42148 42342 1 + 195 hypothetical protein - none -
fig|6666666.230106.peg.2588 CDS DS362246.1 42381 42809 3 + 429 hypothetical protein - none -
fig|6666666.230106.peg.2589 CDS DS362246.1 43054 44190 1 + 1137 hypothetical protein - none -
fig|6666666.230106.peg.2590 CDS DS362246.1 44168 44467 2 + 300 hypothetical protein - none -
fig|6666666.230106.peg.2591 CDS DS362246.1 44472 45341 3 + 870 DNA-methyltransferase - none -
fig|6666666.230106.peg.2592 CDS DS362246.1 45487 45350 -1 - 138 hypothetical protein - none -
fig|6666666.230106.peg.2593 CDS DS362246.1 45735 45932 3 + 198 hypothetical protein - none -
fig|6666666.230106.peg.2594 CDS DS362246.1 45929 46291 2 + 363 hypothetical protein - none -
fig|6666666.230106.peg.2595 CDS DS362246.1 46284 46529 3 + 246 hypothetical protein - none -
fig|6666666.230106.peg.2596 CDS DS362246.1 46526 46825 2 + 300 hypothetical protein - none -
fig|6666666.230106.peg.2597 CDS DS362246.1 48107 46941 -2 - 1167 putative phage integrase - none -
fig|6666666.230106.peg.2598 CDS DS362246.1 48650 49354 2 + 705 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.230106.peg.2599 CDS DS362246.1 50765 49329 -2 - 1437 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.230106.peg.2600 CDS DS362246.1 51501 50773 -3 - 729 hypothetical protein - none -
fig|6666666.230106.peg.2601 CDS DS362246.1 55770 51505 -3 - 4266 putative two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.2602 CDS DS362246.1 55997 56914 2 + 918 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
De Novo Purine Biosynthesis;
Pentose phosphate pathway
fig|6666666.230106.peg.2603 CDS DS362246.1 58170 57007 -3 - 1164 FIG01057005: hypothetical protein - none -
fig|6666666.230106.peg.2604 CDS DS362246.1 59534 58245 -2 - 1290 ZINC PROTEASE (EC 3.4.99.-) - none -
fig|6666666.230106.peg.2605 CDS DS362246.1 60302 59547 -2 - 756 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) - none -
fig|6666666.230106.peg.2606 CDS DS362246.1 60702 60385 -3 - 318 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.230106.peg.2607 CDS DS362246.1 63152 60822 -2 - 2331 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.230106.peg.2608 CDS DS362246.1 63764 64711 2 + 948 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.230106.peg.2609 CDS DS362246.1 64738 65202 1 + 465 Aspartate carbamoyltransferase regulatory chain (PyrI) De Novo Pyrimidine Synthesis
fig|6666666.230106.peg.2610 CDS DS362246.1 65199 65765 3 + 567 Flavoredoxin - none -
fig|6666666.230106.peg.2611 CDS DS362246.1 65810 66559 2 + 750 FIG00897396: hypothetical protein - none -
fig|6666666.230106.peg.2612 CDS DS362246.1 66662 67942 2 + 1281 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.230106.peg.2613 CDS DS362246.1 69732 68062 -3 - 1671 Formate--tetrahydrofolate ligase (EC 6.3.4.3) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.230106.peg.2614 CDS DS362246.1 72001 69848 -1 - 2154 FIG00406183: hypothetical protein - none -
fig|6666666.230106.peg.2615 CDS DS362246.1 72203 73774 2 + 1572 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.230106.peg.2616 CDS DS362246.1 73848 74570 3 + 723 Two-component system response regulator - none -
fig|6666666.230106.peg.2617 CDS DS362246.1 74592 74879 3 + 288 FIG00408616: hypothetical protein - none -
fig|6666666.230106.peg.2618 CDS DS362246.1 74935 75399 1 + 465 FIG00408616: hypothetical protein - none -
fig|6666666.230106.peg.2619 CDS DS362246.1 75500 76096 2 + 597 FIG00404985: hypothetical protein - none -
fig|6666666.230106.peg.2620 CDS DS362246.1 76122 77024 3 + 903 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230106.peg.2621 CDS DS362246.1 79271 77118 -2 - 2154 DNA repair and recombination protein, putative helicase - none -
fig|6666666.230106.peg.2622 CDS DS362246.1 80329 79439 -1 - 891 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.230106.peg.2623 CDS DS362246.1 82037 80451 -2 - 1587 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.230106.peg.2624 CDS DS362246.1 82707 82168 -3 - 540 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.230106.peg.2625 CDS DS362246.1 83246 82740 -2 - 507 ATP synthase F0 sector subunit b - none -
fig|6666666.230106.peg.2626 CDS DS362246.1 83599 83342 -1 - 258 ATP synthase F0 sector subunit c - none -
fig|6666666.230106.peg.2627 CDS DS362246.1 84726 83656 -3 - 1071 ATP synthase F0 sector subunit a - none -
fig|6666666.230106.peg.2628 CDS DS362246.1 85087 84710 -1 - 378 FIG048548: ATP synthase protein I2 - none -
fig|6666666.230106.peg.2629 CDS DS362246.1 85422 85171 -3 - 252 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.230106.peg.2630 CDS DS362246.1 86974 85439 -1 - 1536 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.230106.peg.2631 CDS DS362246.1 88619 87585 -2 - 1035 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.230106.peg.2632 CDS DS362246.1 89335 88751 -1 - 585 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230106.peg.2633 CDS DS362246.1 89989 89423 -1 - 567 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230106.peg.2634 CDS DS362246.1 90659 90024 -2 - 636 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230106.peg.2635 CDS DS362246.1 91678 90686 -1 - 993 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230106.peg.2636 CDS DS362246.1 93022 91685 -1 - 1338 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230106.peg.2637 CDS DS362246.1 93985 93083 -1 - 903 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230106.peg.2638 CDS DS362246.1 94442 94023 -2 - 420 FIG00937594: hypothetical protein - none -
fig|6666666.230106.peg.2639 CDS DS362246.1 96112 94673 -1 - 1440 FIG00897178: hypothetical protein - none -
fig|6666666.230106.peg.2640 CDS DS362246.1 96383 98002 2 + 1620 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster
fig|6666666.230106.peg.2641 CDS DS362246.1 98034 99887 3 + 1854 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.230106.peg.2642 CDS DS362246.1 99989 101320 2 + 1332 BexA, multidrug efflux pump - none -
fig|6666666.230106.peg.2643 CDS DS362246.1 101358 103481 3 + 2124 Prolyl oligopeptidase family protein - none -
fig|6666666.230106.peg.2644 CDS DS362246.1 103676 105106 2 + 1431 hypothetical protein - none -
fig|6666666.230106.peg.2645 CDS DS362246.1 106068 105121 -3 - 948 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230106.peg.2646 CDS DS362246.1 107100 106120 -3 - 981 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.230106.peg.2647 CDS DS362246.1 107430 107110 -3 - 321 hypothetical protein - none -
fig|6666666.230106.peg.2648 CDS DS362246.1 107618 107427 -2 - 192 hypothetical protein - none -
fig|6666666.230106.peg.2649 CDS DS362246.1 108924 107692 -3 - 1233 Glycosyl transferase, group 1 CBSS-258594.1.peg.3339
fig|6666666.230106.peg.2650 CDS DS362246.1 110115 108934 -3 - 1182 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230106.peg.2651 CDS DS362246.1 111289 110141 -1 - 1149 Capsular polysaccharide synthesis enzyme Cap5F - none -
fig|6666666.230106.peg.2652 CDS DS362246.1 111650 111330 -2 - 321 predicted nucleic acid-binding protein, contains PIN domain - none -
fig|6666666.230106.peg.2653 CDS DS362246.1 111907 111731 -1 - 177 hypothetical protein - none -
fig|6666666.230106.peg.2654 CDS DS362246.1 113126 112053 -2 - 1074 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) N-linked Glycosylation in Bacteria
fig|6666666.230106.peg.2655 CDS DS362246.1 114145 113129 -1 - 1017 Alpha-1,4-N-acetylgalactosamine transferase PglJ (EC 2.4.1.-) N-linked Glycosylation in Bacteria
fig|6666666.230106.peg.2656 CDS DS362246.1 115345 114149 -1 - 1197 Glycosyl transferase, group 1 CBSS-258594.1.peg.3339
fig|6666666.230106.peg.2657 CDS DS362246.1 116407 115367 -1 - 1041 capsular polysaccharide biosynthesis protein Rhamnose containing glycans
fig|6666666.230106.peg.2658 CDS DS362246.1 117214 116435 -1 - 780 Chloramphenicol acetyltransferase (EC 2.3.1.28) - none -
fig|6666666.230106.peg.2659 CDS DS362246.1 117784 117242 -1 - 543 N-Acetylneuraminate cytidylyltransferase (EC 2.7.7.43) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230106.peg.2660 CDS DS362246.1 118830 117943 -3 - 888 Beta-1,3-glucosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.230106.peg.2661 CDS DS362246.1 119979 118867 -3 - 1113 hypothetical protein - none -
fig|6666666.230106.peg.2662 CDS DS362246.1 121950 120193 -3 - 1758 FIG01066073: hypothetical protein - none -
fig|6666666.230106.peg.2663 CDS DS362246.1 123379 122042 -1 - 1338 hypothetical protein - none -
fig|6666666.230106.peg.2664 CDS DS362246.1 124874 123405 -2 - 1470 Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids - none -
fig|6666666.230106.peg.2665 CDS DS362246.1 125992 125459 -1 - 534 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230106.peg.2666 CDS DS362246.1 126257 126388 2 + 132 hypothetical protein - none -
fig|6666666.230106.peg.2667 CDS DS362246.1 126651 126469 -3 - 183 hypothetical protein - none -
fig|6666666.230106.peg.2668 CDS DS362246.1 126754 127077 1 + 324 hypothetical protein - none -
fig|6666666.230106.peg.2669 CDS DS362246.1 127200 129329 3 + 2130 putative helicase - none -
fig|6666666.230106.peg.2670 CDS DS362246.1 129719 129459 -2 - 261 FIG00407477: hypothetical protein - none -
fig|6666666.230106.peg.2671 CDS DS362246.1 129871 129728 -1 - 144 hypothetical protein - none -
fig|6666666.230106.peg.2672 CDS DS362246.1 130003 130512 1 + 510 FIG00403032: hypothetical protein - none -
fig|6666666.230106.peg.2673 CDS DS362246.1 131795 130665 -2 - 1131 FIG00898796: hypothetical protein - none -
fig|6666666.230106.peg.2674 CDS DS362246.1 132207 132025 -3 - 183 hypothetical protein - none -
fig|6666666.230106.peg.2675 CDS DS362246.1 132384 132617 3 + 234 hypothetical protein - none -
fig|6666666.230106.peg.2676 CDS DS362246.1 132683 132943 2 + 261 hypothetical protein - none -
fig|6666666.230106.peg.2677 CDS DS362246.1 132958 133071 1 + 114 hypothetical protein - none -
fig|6666666.230106.peg.2678 CDS DS362246.1 134605 133112 -1 - 1494 Prolyl-tRNA synthetase (EC 6.1.1.15), archaeal/eukaryal type tRNA aminoacylation, Pro
fig|6666666.230106.peg.2679 CDS DS362246.1 135278 134721 -2 - 558 probable beta-D-galactosidase Galactosylceramide and Sulfatide metabolism
fig|6666666.230106.peg.2680 CDS DS362246.1 136405 135326 -1 - 1080 fibronectin type III domain protein - none -
fig|6666666.230106.peg.2681 CDS DS362246.1 137487 136402 -3 - 1086 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.2682 CDS DS362246.1 138161 137493 -2 - 669 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.230106.peg.2683 CDS DS362246.1 139822 138191 -1 - 1632 Sialidase (EC 3.2.1.18) Galactosylceramide and Sulfatide metabolism;
Sialic Acid Metabolism
fig|6666666.230106.peg.2684 CDS DS362246.1 141251 139836 -2 - 1416 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.2685 CDS DS362246.1 144651 141361 -3 - 3291 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.2686 CDS DS362246.1 145519 144707 -1 - 813 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230106.peg.2687 CDS DS362246.1 148130 145662 -2 - 2469 Predicted sialic acid transporter Sialic Acid Metabolism
fig|6666666.230106.peg.2688 CDS DS362246.1 148888 148142 -1 - 747 Transcriptional regulator, GntR family - none -
fig|6666666.230106.peg.2689 CDS DS362246.1 150098 149316 -2 - 783 Mobile element protein - none -
fig|6666666.230106.peg.2690 CDS DS362246.1 151665 150085 -3 - 1581 Mobile element protein - none -
fig|6666666.230106.peg.2691 CDS DS362246.1 152315 151782 -2 - 534 hypothetical protein - none -
fig|6666666.230106.peg.2692 CDS DS362246.1 153534 152386 -3 - 1149 integrase - none -
fig|6666666.230106.peg.2693 CDS DS362246.1 153944 154465 2 + 522 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2694 CDS DS362246.1 154496 155533 2 + 1038 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2695 CDS DS362246.1 155535 156278 3 + 744 Cobalamin synthase (EC 2.7.8.26) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2696 CDS DS362246.1 156343 156834 1 + 492 Alpha-ribazole-5@1-phosphate phosphatase (EC 3.1.3.73) CBSS-216591.1.peg.168;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Phosphoglycerate mutase protein family
fig|6666666.230106.peg.2697 CDS DS362246.1 158776 156821 -1 - 1956 FIG00412932: hypothetical protein - none -
fig|6666666.230106.peg.2698 CDS DS362246.1 160653 158773 -3 - 1881 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.2699 CDS DS362246.1 161730 160762 -3 - 969 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2700 CDS DS362246.1 162768 161734 -3 - 1035 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2701 CDS DS362246.1 164287 162761 -1 - 1527 Cobyric acid synthase (EC 6.3.5.10) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2702 CDS DS362246.1 164456 165883 2 + 1428 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.230106.peg.2703 CDS DS362246.1 165896 166891 2 + 996 FIG00896745: hypothetical protein - none -
fig|6666666.230106.peg.2704 CDS DS362246.1 166888 169278 1 + 2391 ABC-type multidrug transport system, permease component - none -
fig|6666666.230106.peg.2705 CDS DS362246.1 169519 170703 1 + 1185 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.230106.peg.2706 CDS DS362246.1 171304 170735 -1 - 570 ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17) - none -
fig|6666666.230106.peg.2707 CDS DS362246.1 171832 171308 -1 - 525 hypothetical protein - none -
fig|6666666.230106.peg.2708 CDS DS362246.1 172104 171901 -3 - 204 FIG00409255: hypothetical protein - none -
fig|6666666.230106.peg.2709 CDS DS362246.1 173984 172242 -2 - 1743 FIG00414938: hypothetical protein - none -
fig|6666666.230106.peg.2710 CDS DS362246.1 175117 174044 -1 - 1074 FIG00404780: hypothetical protein - none -
fig|6666666.230106.peg.2711 CDS DS362246.1 176268 175129 -3 - 1140 FIG00403315: hypothetical protein - none -
fig|6666666.230106.peg.2712 CDS DS362246.1 177436 176306 -1 - 1131 FIG00403676: hypothetical protein - none -
fig|6666666.230106.peg.2713 CDS DS362246.1 177558 177433 -3 - 126 hypothetical protein - none -
fig|6666666.230106.peg.2714 CDS DS362246.1 177849 177697 -3 - 153 Integrase - none -
fig|6666666.230106.peg.2715 CDS DS362246.1 178101 179411 3 + 1311 Mobile element protein - none -
fig|6666666.230106.peg.2716 CDS DS362246.1 179431 180642 1 + 1212 Mobile element protein - none -
fig|6666666.230106.peg.2717 CDS DS362246.1 181000 180707 -1 - 294 FIG00417772: hypothetical protein - none -
fig|6666666.230106.peg.2718 CDS DS362246.1 181336 181217 -1 - 120 hypothetical protein - none -
fig|6666666.230106.peg.2719 CDS DS362246.1 181515 181682 3 + 168 hypothetical protein - none -
fig|6666666.230106.peg.2720 CDS DS362246.1 181905 185426 3 + 3522 putative type IIS restriction/modification enzyme - none -
fig|6666666.230106.peg.2721 CDS DS362246.1 188686 186494 -1 - 2193 FIG00404578: hypothetical protein - none -
fig|6666666.230106.peg.2722 CDS DS362246.1 190890 188689 -3 - 2202 FIG00404178: hypothetical protein - none -
fig|6666666.230106.peg.2723 CDS DS362246.1 193044 190897 -3 - 2148 FIG00405564: hypothetical protein - none -
fig|6666666.230106.peg.2724 CDS DS362246.1 194664 193102 -3 - 1563 FIG00403816: hypothetical protein - none -
fig|6666666.230106.peg.2725 CDS DS362246.1 195959 194688 -2 - 1272 FIG00405513: hypothetical protein - none -
fig|6666666.230106.peg.2726 CDS DS362246.1 198843 195973 -3 - 2871 putative outer membrane receptor - none -
fig|6666666.230106.peg.2727 CDS DS362246.1 201718 199754 -1 - 1965 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.2728 CDS DS362246.1 203677 202892 -1 - 786 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2729 CDS DS362246.1 204007 203756 -1 - 252 hypothetical protein - none -
fig|6666666.230106.peg.2730 CDS DS362246.1 204351 204190 -3 - 162 hypothetical protein - none -
fig|6666666.230106.peg.2731 CDS DS362246.1 204728 204937 2 + 210 FIG00406380: hypothetical protein - none -
fig|6666666.230106.peg.2732 CDS DS362246.1 205089 204943 -3 - 147 hypothetical protein - none -
fig|6666666.230106.peg.2733 CDS DS362246.1 205120 205251 1 + 132 hypothetical protein - none -
fig|6666666.230106.peg.2734 CDS DS362246.1 206111 205521 -2 - 591 FIG00405933: hypothetical protein - none -
fig|6666666.230106.peg.2735 CDS DS362246.1 206842 206084 -1 - 759 iron(III) ABC transporter, ATP-binding protein, putative - none -
fig|6666666.230106.peg.2736 CDS DS362246.1 207819 206839 -3 - 981 Vitamin B12 ABC transporter, permease component BtuC Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2737 CDS DS362246.1 208959 207820 -3 - 1140 Iron compound ABC transporter, iron compound-binding protein - none -
fig|6666666.230106.peg.2738 CDS DS362246.1 211028 208971 -2 - 2058 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.2739 CDS DS362246.1 212141 211068 -2 - 1074 putative surface layer protein - none -
fig|6666666.230106.peg.2740 CDS DS362246.1 214287 212197 -3 - 2091 putative cell wall biogenesis protein - none -
fig|6666666.230106.peg.2741 CDS DS362246.1 216083 214302 -2 - 1782 putative cell surface protein - none -
fig|6666666.230106.peg.2742 CDS DS362246.1 217065 216148 -3 - 918 FIG00402688: hypothetical protein - none -
fig|6666666.230106.peg.2743 CDS DS362246.1 217434 217309 -3 - 126 hypothetical protein - none -
fig|6666666.230106.peg.2744 CDS DS362246.1 219056 218163 -2 - 894 Integrase - none -
fig|6666666.230106.peg.2745 CDS DS362246.1 220367 219486 -2 - 882 FIG00405311: hypothetical protein - none -
fig|6666666.230106.peg.2746 CDS DS362246.1 221924 220536 -2 - 1389 Cobyrinic acid A,C-diamide synthase Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2747 CDS DS362246.1 222110 223540 2 + 1431 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases - none -
fig|6666666.230106.peg.2748 CDS DS362246.1 223566 224306 3 + 741 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230106.peg.2749 CDS DS362246.1 226087 224402 -1 - 1686 Predicted cobalt transporter in Bacteroides_Porphyromonas Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2750 CDS DS362246.1 227747 226215 -2 - 1533 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Colicin V and Bacteriocin Production Cluster;
Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.230106.peg.2751 CDS DS362246.1 228317 227802 -2 - 516 Biotin carboxyl carrier protein of acetyl-CoA carboxylase; Biotin carboxyl carrier protein Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.230106.peg.2752 CDS DS362246.1 229860 228349 -3 - 1512 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) Fatty Acid Biosynthesis FASII
fig|6666666.230106.peg.2753 CDS DS362246.1 230630 232933 2 + 2304 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.2754 CDS DS362246.1 232955 234259 2 + 1305 FIG00897953: hypothetical protein - none -
fig|6666666.230106.peg.2755 CDS DS362246.1 234277 235224 1 + 948 Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2756 CDS DS362246.1 235294 236808 1 + 1515 Optional hypothetical component of the B12 transporter BtuN Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2757 CDS DS362246.1 236824 240738 1 + 3915 CobN/magnesium chelatase family protein - none -
fig|6666666.230106.peg.2758 CDS DS362246.1 240751 241308 1 + 558 FIG00402742: hypothetical protein - none -
fig|6666666.230106.peg.2759 CDS DS362246.1 241342 241947 1 + 606 hypothetical transporter PduT for various metalloporphyrins - none -
fig|6666666.230106.peg.2760 CDS DS362246.1 242020 242301 1 + 282 FIG00935708: hypothetical protein - none -
fig|6666666.230106.peg.2761 CDS DS362246.1 242417 244486 2 + 2070 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.2762 CDS DS362246.1 244521 245345 3 + 825 Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2763 CDS DS362246.1 245555 246454 2 + 900 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.2764 CDS DS362246.1 246548 247963 2 + 1416 Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) Cobalamin synthesis;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2765 CDS DS362246.1 248090 249328 2 + 1239 Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2766 CDS DS362246.1 249340 251193 1 + 1854 Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) Cobalamin synthesis;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2767 CDS DS362246.1 251226 253121 3 + 1896 Cobalt-precorrin-6x reductase (EC 1.3.1.54) / Cobalt-precorrin-6 synthase, anaerobic Cobalamin synthesis;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2768 CDS DS362246.1 253118 253789 2 + 672 hypothetical protein - none -
fig|6666666.230106.peg.2769 CDS DS362246.1 253857 254942 3 + 1086 Choloylglycine hydrolase (EC 3.5.1.24) Bile hydrolysis
fig|6666666.230106.peg.2770 CDS DS362246.1 256239 254956 -3 - 1284 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230106.peg.2771 CDS DS362246.1 257351 256332 -2 - 1020 Ferric enterobactin transport ATP-binding protein FepC (TC 3.A.1.14.2) - none -
fig|6666666.230106.peg.2772 CDS DS362246.1 258357 257344 -3 - 1014 Vitamin B12 ABC transporter, permease component BtuC Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2773 CDS DS362246.1 259550 258381 -2 - 1170 Vitamin B12 ABC transporter, B12-binding component BtuF Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2774 CDS DS362246.1 261008 259653 -2 - 1356 Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4); Mercuric ion reductase (EC 1.16.1.1); PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase Mercuric reductase;
Mercuric reductase;
Mercury resistance operon;
TCA Cycle
fig|6666666.230106.peg.2775 CDS DS362246.1 261603 261013 -3 - 591 membrane protein ykgB - none -
fig|6666666.230106.peg.2776 CDS DS362246.1 262551 261694 -3 - 858 transcriptional regulator - none -
fig|6666666.230106.peg.2777 CDS DS362246.1 262674 263381 3 + 708 Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230106.peg.2778 CDS DS362246.1 263473 263868 1 + 396 FIG00413813: hypothetical protein - none -
fig|6666666.230106.peg.2779 CDS DS362246.1 263966 265957 2 + 1992 Oligopeptide transporter, OPT family - none -
fig|6666666.230106.peg.2780 CDS DS362246.1 265976 266863 2 + 888 Xylanase Xylose utilization
fig|6666666.230106.peg.2781 CDS DS362246.1 266872 270093 1 + 3222 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.2782 CDS DS362246.1 270191 270979 2 + 789 probable lipoprotein YPO2292 - none -
fig|6666666.230106.peg.2783 CDS DS362246.1 272611 271058 -1 - 1554 FIG00899379: hypothetical protein - none -
fig|6666666.230106.peg.2784 CDS DS362246.1 273699 272749 -3 - 951 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230106.peg.2785 CDS DS362246.1 274718 273723 -2 - 996 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.230106.peg.2786 CDS DS362246.1 275670 274840 -3 - 831 putative glycosyltransferase - none -
fig|6666666.230106.peg.2787 CDS DS362246.1 276896 275709 -2 - 1188 glycosyltransferase - none -
fig|6666666.230106.peg.2788 CDS DS362246.1 277746 276910 -3 - 837 Lipopolysaccharide cholinephosphotransferase LicD1 (EC 2.7.8.-) - none -
fig|6666666.230106.peg.2789 CDS DS362246.1 278996 277746 -2 - 1251 Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids - none -
fig|6666666.230106.peg.2790 CDS DS362246.1 279990 279016 -3 - 975 hypothetical protein - none -
fig|6666666.230106.peg.2791 CDS DS362246.1 281089 280013 -1 - 1077 EpsK - none -
fig|6666666.230106.peg.2792 CDS DS362246.1 282267 281134 -3 - 1134 Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39) Rhamnose containing glycans
fig|6666666.230106.peg.2793 CDS DS362246.1 284201 283083 -2 - 1119 hypothetical protein - none -
fig|6666666.230106.peg.2794 CDS DS362246.1 285475 285275 -1 - 201 hypothetical protein - none -
fig|6666666.230106.peg.2795 CDS DS362246.1 286014 285817 -3 - 198 hypothetical protein - none -
fig|6666666.230106.peg.2796 CDS DS362246.1 286970 286011 -2 - 960 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230106.peg.2797 CDS DS362246.1 287735 287007 -2 - 729 Serine/threonine protein phosphatase (EC 3.1.3.16) - none -
fig|6666666.230106.peg.2798 CDS DS362246.1 288866 287739 -2 - 1128 Phosphonopyruvate decarboxylase (EC 4.1.1.82) Phosphoenolpyruvate phosphomutase;
Phosphonate metabolism
fig|6666666.230106.peg.2799 CDS DS362246.1 290211 288901 -3 - 1311 Phosphoenolpyruvate phosphomutase (EC 5.4.2.9) Phosphoenolpyruvate phosphomutase;
Phosphonate metabolism
fig|6666666.230106.peg.2800 CDS DS362246.1 291359 290607 -2 - 753 Serine--glyoxylate aminotransferase (EC 2.6.1.45) Glycerate metabolism;
Serine-glyoxylate cycle
fig|6666666.230106.peg.2801 CDS DS362246.1 291956 292558 2 + 603 FIG00407803: hypothetical protein - none -
fig|6666666.230106.peg.2802 CDS DS362246.1 292610 294385 2 + 1776 FIG00896590: hypothetical protein - none -
fig|6666666.230106.peg.2803 CDS DS362246.1 294728 294510 -2 - 219 FIG00417360: hypothetical protein - none -
fig|6666666.230106.peg.2804 CDS DS362246.1 294937 295422 1 + 486 FIG00415943: hypothetical protein - none -
fig|6666666.230106.peg.2805 CDS DS362246.1 295608 295453 -3 - 156 hypothetical protein - none -
fig|6666666.230106.peg.2806 CDS DS362246.1 295630 295992 1 + 363 N-acetylmuramoyl-L-alanine amidase - none -
fig|6666666.230106.peg.2807 CDS DS362246.1 297131 296130 -2 - 1002 N-acetylneuraminate synthase (EC 2.5.1.56) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230106.peg.2808 CDS DS362246.1 298293 297154 -3 - 1140 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain protein - none -
fig|6666666.230106.peg.2809 CDS DS362246.1 299225 298290 -2 - 936 FIG00387988: hypothetical protein - none -
fig|6666666.230106.peg.2810 CDS DS362246.1 300193 299216 -1 - 978 N-Acetylneuraminate cytidylyltransferase (EC 2.7.7.43) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230106.peg.2811 CDS DS362246.1 300881 300198 -2 - 684 N-Acetylneuraminate cytidylyltransferase (EC 2.7.7.43) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230106.peg.2812 CDS DS362246.1 302041 300878 -1 - 1164 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) - none -
fig|6666666.230106.peg.2813 CDS DS362246.1 303060 302038 -3 - 1023 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) N-linked Glycosylation in Bacteria
fig|6666666.230106.peg.2814 CDS DS362246.1 303562 303074 -1 - 489 UpdZ protein - none -
fig|6666666.230106.peg.2815 CDS DS362246.1 304134 303598 -3 - 537 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230106.peg.2816 CDS DS362246.1 304961 304677 -2 - 285 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.2817 CDS DS362246.1 305523 305299 -3 - 225 hypothetical protein - none -
fig|6666666.230106.peg.2818 CDS DS362246.1 305779 305633 -1 - 147 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.2819 CDS DS362246.1 306182 305856 -2 - 327 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.230106.peg.2820 CDS DS362246.1 307588 306398 -1 - 1191 [FeFe]-hydrogenase maturation GTPase HydF - none -
fig|6666666.230106.peg.2821 CDS DS362246.1 308388 307600 -3 - 789 2-iminoacetate synthase (ThiH) (EC 4.1.99.19) - none -
fig|6666666.230106.peg.2822 CDS DS362247.1 1081 1659 1 + 579 COG1399 protein in cluster with ribosomal protein L32p, Bacteroidetes/Chlorobi subfamily - none -
fig|6666666.230106.peg.2823 CDS DS362247.1 1981 2985 1 + 1005 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) - none -
fig|6666666.230106.peg.2824 CDS DS362247.1 3071 3952 2 + 882 GTP-binding protein Era Bacterial Cell Division;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.230106.peg.2825 CDS DS362247.1 4002 5315 3 + 1314 GTP-binding protein EngA Universal GTPases
fig|6666666.230106.peg.2826 CDS DS362247.1 6200 5430 -2 - 771 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230106.peg.2827 CDS DS362247.1 6919 6197 -1 - 723 ABC-type transport system involved in resistance to organic solvents, permease component - none -
fig|6666666.230106.peg.2828 CDS DS362247.1 7018 7863 1 + 846 Lipopolysaccharide ABC transporter, ATP-binding protein LptB - none -
fig|6666666.230106.peg.2829 CDS DS362247.1 8194 7946 -1 - 249 RNA binding protein - none -
fig|6666666.230106.peg.2830 CDS DS362247.1 8669 10024 2 + 1356 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.230106.peg.2831 CDS DS362247.1 10195 10818 1 + 624 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.230106.peg.2832 CDS DS362247.1 10902 12065 3 + 1164 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.230106.peg.2833 CDS DS362247.1 12240 14423 3 + 2184 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.230106.peg.2834 CDS DS362247.1 14526 16001 3 + 1476 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.230106.peg.2835 CDS DS362247.1 16091 17653 2 + 1563 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) ECSIG4-SIG7;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.230106.peg.2836 CDS DS362247.1 17711 18559 2 + 849 FIG00898614: hypothetical protein - none -
fig|6666666.230106.peg.2837 CDS DS362247.1 18582 19937 3 + 1356 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) ECSIG4-SIG7;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.230106.peg.2838 CDS DS362247.1 19963 21684 1 + 1722 FIG00937328: hypothetical protein - none -
fig|6666666.230106.peg.2839 CDS DS362247.1 21689 21979 2 + 291 FIG00403378: hypothetical protein - none -
fig|6666666.230106.peg.2840 CDS DS362247.1 22019 23935 2 + 1917 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.230106.peg.2841 CDS DS362247.1 24079 25257 1 + 1179 Major outer membrane protein OmpA - none -
fig|6666666.230106.peg.2842 CDS DS362247.1 26508 25414 -3 - 1095 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.230106.peg.2843 CDS DS362247.1 27227 26583 -2 - 645 FIG00416553: hypothetical protein - none -
fig|6666666.230106.peg.2844 CDS DS362247.1 27521 27393 -2 - 129 hypothetical protein - none -
fig|6666666.230106.peg.2845 CDS DS362247.1 27661 27777 1 + 117 hypothetical protein - none -
fig|6666666.230106.peg.2846 CDS DS362247.1 27869 31096 2 + 3228 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.230106.peg.2847 CDS DS362247.1 31225 31785 1 + 561 Maltose O-acetyltransferase (EC 2.3.1.79) Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.2848 CDS DS362247.1 32254 33600 1 + 1347 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.230106.peg.2849 CDS DS362247.1 33737 35221 2 + 1485 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.230106.peg.2850 CDS DS362247.1 35251 36654 1 + 1404 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn
fig|6666666.230106.peg.2851 CDS DS362247.1 36806 37297 2 + 492 FIG00402847: hypothetical protein - none -
fig|6666666.230106.peg.2852 CDS DS362247.1 37636 38097 1 + 462 LSU ribosomal protein L13p (L13Ae) - none -
fig|6666666.230106.peg.2853 CDS DS362247.1 38104 38490 1 + 387 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.230106.peg.2854 CDS DS362247.1 38663 39496 2 + 834 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.230106.peg.2855 CDS DS362247.1 39619 40611 1 + 993 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.230106.peg.2856 CDS DS362247.1 41066 40719 -2 - 348 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.230106.peg.2857 CDS DS362247.1 41217 41873 3 + 657 Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) Oxidative stress
fig|6666666.230106.peg.2858 CDS DS362247.1 41873 42490 2 + 618 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.230106.peg.2859 CDS DS362247.1 42755 42937 2 + 183 hypothetical protein - none -
fig|6666666.230106.peg.2860 CDS DS362247.1 43060 43500 1 + 441 Mobile element protein - none -
fig|6666666.230106.peg.2861 CDS DS362247.1 43551 44024 3 + 474 Mobile element protein - none -
fig|6666666.230106.peg.2862 CDS DS362247.1 44357 48448 2 + 4092 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.2863 CDS DS362247.1 48570 49931 3 + 1362 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230106.peg.2864 CDS DS362247.1 49928 51307 2 + 1380 N-acetylgalactosamine-6-sulfatase precursor - none -
fig|6666666.230106.peg.2865 CDS DS362247.1 51348 52973 3 + 1626 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230106.peg.2866 CDS DS362247.1 53428 54960 1 + 1533 Putative sulfatase (EC 3.1.6.-) - none -
fig|6666666.230106.peg.2867 CDS DS362247.1 55261 58386 1 + 3126 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.2868 CDS DS362247.1 58471 60030 1 + 1560 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.2869 CDS DS362247.1 60055 60522 1 + 468 hypothetical protein - none -
fig|6666666.230106.peg.2870 CDS DS362247.1 60526 61755 1 + 1230 putative alpha-1,6-mannanase - none -
fig|6666666.230106.peg.2871 CDS DS362247.1 61770 63239 3 + 1470 FIG00937589: hypothetical protein - none -
fig|6666666.230106.peg.2872 CDS DS362247.1 63309 65123 3 + 1815 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.2873 CDS DS362247.1 65148 66533 3 + 1386 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230106.peg.2874 CDS DS362247.1 66777 68711 3 + 1935 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230106.peg.2875 CDS DS362247.1 68724 70388 3 + 1665 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230106.peg.2876 CDS DS362247.1 70437 72002 3 + 1566 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230106.peg.2877 CDS DS362247.1 72049 73272 1 + 1224 Putative arylsulfatase regulatory protein - none -
fig|6666666.230106.peg.2878 CDS DS362247.1 73315 74448 1 + 1134 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.2879 CDS DS362247.1 74632 75111 1 + 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.230106.peg.2880 CDS DS362247.1 75143 76159 2 + 1017 Putative phosphohydrolase, Icc family - none -
fig|6666666.230106.peg.2881 CDS DS362247.1 78936 76354 -3 - 2583 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.2882 CDS DS362247.1 80370 78952 -3 - 1419 Oxidoreductase, Gfo/Idh/MocA family - none -
fig|6666666.230106.peg.2883 CDS DS362247.1 81977 80430 -2 - 1548 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.2884 CDS DS362247.1 85463 81999 -2 - 3465 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.2885 CDS DS362247.1 85766 86362 2 + 597 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.2886 CDS DS362247.1 86370 87380 3 + 1011 putative anti-sigma factor - none -
fig|6666666.230106.peg.2887 CDS DS362247.1 87385 88521 1 + 1137 oxidoreductase, Gfo/Idh/MocA family protein - none -
fig|6666666.230106.peg.2888 CDS DS362247.1 88621 89676 1 + 1056 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.230106.peg.2889 CDS DS362247.1 90548 89688 -2 - 861 FIG00408272: hypothetical protein - none -
fig|6666666.230106.peg.2890 CDS DS362247.1 91716 90616 -3 - 1101 FIG00411696: hypothetical protein - none -
fig|6666666.230106.peg.2891 CDS DS362247.1 91953 94238 3 + 2286 Cellulase - none -
fig|6666666.230106.peg.2892 CDS DS362247.1 94493 97030 2 + 2538 FIG00414427: hypothetical protein - none -
fig|6666666.230106.peg.2893 CDS DS362247.1 97597 99438 1 + 1842 FIG00415043: hypothetical protein - none -
fig|6666666.230106.peg.2894 CDS DS362247.1 99541 100998 1 + 1458 putative alpha-1,6-mannanase - none -
fig|6666666.230106.peg.2895 CDS DS362247.1 101017 104187 1 + 3171 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.2896 CDS DS362247.1 104246 106288 2 + 2043 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.2897 CDS DS362247.1 106317 107132 3 + 816 FIG00404357: hypothetical protein - none -
fig|6666666.230106.peg.2898 CDS DS362247.1 107254 109434 1 + 2181 FIG00410540: hypothetical protein - none -
fig|6666666.230106.peg.2899 CDS DS362247.1 109641 111989 3 + 2349 Glutaminase A - none -
fig|6666666.230106.peg.2900 CDS DS362247.1 111986 114313 2 + 2328 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230106.peg.2901 CDS DS362247.1 114443 115447 2 + 1005 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230106.peg.2902 CDS DS362247.1 115483 116967 1 + 1485 FIG00937589: hypothetical protein - none -
fig|6666666.230106.peg.2903 CDS DS362247.1 116976 119033 3 + 2058 Putative glycosyl hydrolase of unknown function (DUF1680) - none -
fig|6666666.230106.peg.2904 CDS DS362247.1 119110 120198 1 + 1089 Integral membrane protein - none -
fig|6666666.230106.peg.2905 CDS DS362247.1 120312 120449 3 + 138 hypothetical protein - none -
fig|6666666.230106.peg.2906 CDS DS362247.1 120734 120955 2 + 222 hypothetical protein - none -
fig|6666666.230106.peg.2907 CDS DS362247.1 120996 121775 3 + 780 FIG00410124: hypothetical protein - none -
fig|6666666.230106.peg.2908 CDS DS362247.1 122691 121903 -3 - 789 FIG00418142: hypothetical protein - none -
fig|6666666.230106.peg.2909 CDS DS362247.1 122823 123731 3 + 909 putative transcriptional regulator - none -
fig|6666666.230106.peg.2910 CDS DS362247.1 123835 124869 1 + 1035 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.230106.peg.2911 CDS DS362247.1 125003 124827 -2 - 177 hypothetical protein - none -
fig|6666666.230106.peg.2912 CDS DS362247.1 125214 125348 3 + 135 hypothetical protein - none -
fig|6666666.230106.peg.2913 CDS DS362247.1 125388 126527 3 + 1140 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.230106.peg.2914 CDS DS362247.1 126524 127891 2 + 1368 Subtilisin-like serine proteases - none -
fig|6666666.230106.peg.2915 CDS DS362247.1 127896 129128 3 + 1233 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.230106.peg.2916 CDS DS362247.1 129207 129605 3 + 399 FIG00412189: hypothetical protein - none -
fig|6666666.230106.peg.2917 CDS DS362247.1 129618 129833 3 + 216 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.230106.peg.2918 CDS DS362247.1 129887 130906 2 + 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.230106.peg.2919 CDS DS362247.1 131069 131827 2 + 759 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation;
tRNA modification Bacteria
fig|6666666.230106.peg.2920 CDS DS362247.1 131902 133002 1 + 1101 Septum site-determining protein MinD Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
Septum site-determining cluster Min
fig|6666666.230106.peg.2921 CDS DS362247.1 134915 133095 -2 - 1821 Regulatory sensor-transducer, BlaR1/MecR1 family / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.2922 CDS DS362247.1 135280 134918 -1 - 363 Transcriptional regulator, MecI family - none -
fig|6666666.230106.peg.2923 CDS DS362247.1 135513 135358 -3 - 156 FIG00416158: hypothetical protein - none -
fig|6666666.230106.peg.2924 CDS DS362247.1 135570 137108 3 + 1539 Oxidoreductase, Gfo/Idh/MocA family - none -
fig|6666666.230106.peg.2925 CDS DS362247.1 139075 137174 -1 - 1902 Thiol:disulfide interchange protein tlpA - none -
fig|6666666.230106.peg.2926 CDS DS362247.1 139243 140289 1 + 1047 Platelet-activating factor acetylhydrolase IB gamma subunit (EC 3.1.1.47) - none -
fig|6666666.230106.peg.2927 CDS DS362247.1 141746 140508 -2 - 1239 ABC-type multidrug transport system, permease component - none -
fig|6666666.230106.peg.2928 CDS DS362247.1 142927 141746 -1 - 1182 ABC-type multidrug transport system, permease component - none -
fig|6666666.230106.peg.2929 CDS DS362247.1 143911 142952 -1 - 960 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.230106.peg.2930 CDS DS362247.1 145453 143987 -1 - 1467 Type I secretion system, outer membrane component LapE - none -
fig|6666666.230106.peg.2931 CDS DS362247.1 146453 145575 -2 - 879 FIG00938717: hypothetical protein - none -
fig|6666666.230106.peg.2932 CDS DS362247.1 146684 147625 2 + 942 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.230106.peg.2933 CDS DS362247.1 147720 150977 3 + 3258 putative Tricorn-like protease - none -
fig|6666666.230106.peg.2934 CDS DS362247.1 153611 151059 -2 - 2553 Rhamnogalacturonides degradation protein RhiN D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230106.peg.2935 CDS DS362247.1 155352 153736 -3 - 1617 FIG00898178: hypothetical protein - none -
fig|6666666.230106.peg.2936 CDS DS362247.1 158613 155374 -3 - 3240 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.2937 CDS DS362247.1 159743 158724 -2 - 1020 putative anti-sigma factor - none -
fig|6666666.230106.peg.2938 CDS DS362247.1 159897 160445 3 + 549 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.2939 CDS DS362247.1 162725 160515 -2 - 2211 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.2940 CDS DS362247.1 163602 162832 -3 - 771 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.2941 CDS DS362247.1 166334 163614 -2 - 2721 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.2942 CDS DS362247.1 168109 166331 -1 - 1779 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.2943 CDS DS362247.1 170161 168167 -1 - 1995 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.2944 CDS DS362247.1 171468 170176 -3 - 1293 FIG00404622: hypothetical protein - none -
fig|6666666.230106.peg.2945 CDS DS362247.1 173545 171482 -1 - 2064 Alpha-galactosidase (EC 3.2.1.22) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization
fig|6666666.230106.peg.2946 CDS DS362247.1 175473 173593 -3 - 1881 FIG00406056: hypothetical protein - none -
fig|6666666.230106.peg.2947 CDS DS362247.1 177340 175610 -1 - 1731 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.2948 CDS DS362247.1 180657 177355 -3 - 3303 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.2949 CDS DS362247.1 181908 180904 -3 - 1005 putative anti-sigma factor - none -
fig|6666666.230106.peg.2950 CDS DS362247.1 182543 181962 -2 - 582 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.2951 CDS DS362247.1 182771 182658 -2 - 114 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.230106.peg.2952 CDS DS362247.1 183025 184236 1 + 1212 Integrase - none -
fig|6666666.230106.peg.2953 CDS DS362247.1 184647 184330 -3 - 318 hypothetical protein - none -
fig|6666666.230106.peg.2954 CDS DS362247.1 184942 184649 -1 - 294 hypothetical protein - none -
fig|6666666.230106.peg.2955 CDS DS362247.1 185173 184964 -1 - 210 hypothetical protein - none -
fig|6666666.230106.peg.2956 CDS DS362247.1 185185 186177 1 + 993 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.230106.peg.2957 CDS DS362247.1 186447 186136 -3 - 312 hypothetical protein - none -
fig|6666666.230106.peg.2958 CDS DS362247.1 187058 186471 -2 - 588 FIG00415876: hypothetical protein - none -
fig|6666666.230106.peg.2959 CDS DS362247.1 187914 187087 -3 - 828 hypothetical protein - none -
fig|6666666.230106.peg.2960 CDS DS362247.1 188752 188099 -1 - 654 hypothetical protein - none -
fig|6666666.230106.peg.2961 CDS DS362247.1 189421 188810 -1 - 612 hypothetical protein - none -
fig|6666666.230106.peg.2962 CDS DS362247.1 190257 189895 -3 - 363 hypothetical protein - none -
fig|6666666.230106.peg.2963 CDS DS362247.1 191002 191148 1 + 147 hypothetical protein - none -
fig|6666666.230106.peg.2964 CDS DS362247.1 191394 192368 3 + 975 DNA primase TraC - none -
fig|6666666.230106.peg.2965 CDS DS362247.1 192439 193095 1 + 657 hypothetical protein - none -
fig|6666666.230106.peg.2966 CDS DS362247.1 193140 193349 3 + 210 hypothetical protein - none -
fig|6666666.230106.peg.2967 CDS DS362247.1 193361 193909 2 + 549 hypothetical protein - none -
fig|6666666.230106.peg.2968 CDS DS362247.1 194060 195772 2 + 1713 Chromosome (plasmid) partitioning protein ParB Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.230106.peg.2969 CDS DS362247.1 195882 196484 3 + 603 hypothetical protein - none -
fig|6666666.230106.peg.2970 CDS DS362247.1 196904 197347 2 + 444 DNA repair protein RadC Bacterial cell division cluster;
DNA repair, bacterial
fig|6666666.230106.peg.2971 CDS DS362247.1 197564 198136 2 + 573 conserved hypothetical protein - none -
fig|6666666.230106.peg.2972 CDS DS362247.1 198140 198640 2 + 501 hypothetical protein - none -
fig|6666666.230106.peg.2973 CDS DS362247.1 199578 198730 -3 - 849 hypothetical protein - none -
fig|6666666.230106.peg.2974 CDS DS362247.1 200117 199608 -2 - 510 hypothetical protein - none -
fig|6666666.230106.peg.2975 CDS DS362247.1 200700 200251 -3 - 450 Conjugative transposon protein TraQ Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2976 CDS DS362247.1 201308 200727 -2 - 582 Conjugative transposon protein TraO Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2977 CDS DS362247.1 202250 201312 -2 - 939 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2978 CDS DS362247.1 203682 202288 -3 - 1395 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2979 CDS DS362247.1 204869 203703 -2 - 1167 hypothetical protein - none -
fig|6666666.230106.peg.2980 CDS DS362247.1 205128 204844 -3 - 285 Conjugative transposon protein TraL Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2981 CDS DS362247.1 205757 205134 -2 - 624 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2982 CDS DS362247.1 206811 205807 -3 - 1005 Conjugative transposon protein TraJ Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2983 CDS DS362247.1 207490 206861 -1 - 630 Conjugative transposon protein TraI Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2984 CDS DS362247.1 207857 207495 -2 - 363 Conjugative transposon protein TraH Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2985 CDS DS362247.1 210574 208073 -1 - 2502 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2986 CDS DS362247.1 210894 210571 -3 - 324 Conjugative transposon protein TraF Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2987 CDS DS362247.1 211205 210906 -2 - 300 Conjugative transposon protein TraE Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2988 CDS DS362247.1 211811 211224 -2 - 588 Conjugative transposon protein TraD Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2989 CDS DS362247.1 212235 211831 -3 - 405 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2990 CDS DS362247.1 212995 212216 -1 - 780 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2991 CDS DS362247.1 213008 213175 2 + 168 hypothetical protein - none -
fig|6666666.230106.peg.2992 CDS DS362247.1 213362 213240 -2 - 123 hypothetical protein - none -
fig|6666666.230106.peg.2993 CDS DS362247.1 213566 213423 -2 - 144 hypothetical protein - none -
fig|6666666.230106.peg.2994 CDS DS362247.1 213720 214151 3 + 432 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2995 CDS DS362247.1 214148 215443 2 + 1296 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2996 CDS DS362247.1 215701 216624 1 + 924 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2997 CDS DS362247.1 217261 218913 1 + 1653 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) Group II intron-associated genes
fig|6666666.230106.peg.2998 CDS DS362247.1 218954 220123 2 + 1170 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230106.peg.2999 CDS DS362247.1 220234 220629 1 + 396 putative transmembrane protein - none -
fig|6666666.230106.peg.3000 CDS DS362247.1 221973 221023 -3 - 951 hypothetical protein - none -
fig|6666666.230106.peg.3001 CDS DS362247.1 222407 222036 -2 - 372 hypothetical protein - none -
fig|6666666.230106.peg.3002 CDS DS362247.1 222888 222487 -3 - 402 hypothetical protein - none -
fig|6666666.230106.peg.3003 CDS DS362247.1 223855 222974 -1 - 882 FIG00416545: hypothetical protein - none -
fig|6666666.230106.peg.3004 CDS DS362247.1 225054 223930 -3 - 1125 Integron integrase IntIPac Integrons
fig|6666666.230106.peg.3005 CDS DS362247.1 225357 225223 -3 - 135 hypothetical protein - none -
fig|6666666.230106.peg.3006 CDS DS362247.1 225407 226894 2 + 1488 FIG00412109: hypothetical protein - none -
fig|6666666.230106.peg.3007 CDS DS362247.1 226984 229086 1 + 2103 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.230106.peg.3008 CDS DS362247.1 229083 229559 3 + 477 FIG00408765: hypothetical protein - none -
fig|6666666.230106.peg.3009 CDS DS362247.1 229669 230751 1 + 1083 hypothetical protein - none -
fig|6666666.230106.peg.3010 CDS DS362247.1 230753 231136 2 + 384 FIG00416724: hypothetical protein - none -
fig|6666666.230106.peg.3011 CDS DS362247.1 231878 231387 -2 - 492 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.230106.peg.3012 CDS DS362247.1 231900 232067 3 + 168 hypothetical protein - none -
fig|6666666.230106.peg.3013 CDS DS362247.1 232700 232341 -2 - 360 hypothetical protein - none -
fig|6666666.230106.peg.3014 CDS DS362247.1 234828 232675 -3 - 2154 Toprim domain protein CBSS-315749.4.peg.3658
fig|6666666.230106.peg.3015 CDS DS362247.1 235330 234791 -1 - 540 FIG00936922: hypothetical protein - none -
fig|6666666.230106.peg.3016 CDS DS362247.1 235315 235428 1 + 114 hypothetical protein - none -
fig|6666666.230106.peg.3017 CDS DS362247.1 236419 235583 -1 - 837 Tetracycline resistance element mobilization regulatory protein rteC - none -
fig|6666666.230106.peg.3018 CDS DS362247.1 237411 236542 -3 - 870 putative AraC family transcriptional regulator - none -
fig|6666666.230106.peg.3019 CDS DS362247.1 238197 237637 -3 - 561 FIG00402828: hypothetical protein - none -
fig|6666666.230106.peg.3020 CDS DS362247.1 238473 238228 -3 - 246 FIG00413035: hypothetical protein - none -
fig|6666666.230106.peg.3021 CDS DS362247.1 238638 239417 3 + 780 FIG00410414: hypothetical protein - none -
fig|6666666.230106.peg.3022 CDS DS362247.1 241334 240474 -2 - 861 Mobile element protein - none -
fig|6666666.230106.peg.3023 CDS DS362247.1 241639 241457 -1 - 183 hypothetical protein - none -
fig|6666666.230106.peg.3024 CDS DS362247.1 242873 241977 -2 - 897 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.230106.peg.3025 CDS DS362247.1 242951 243664 2 + 714 Pyridoxine 5@1-phosphate synthase (EC 2.6.99.2) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230106.peg.3026 CDS DS362247.1 243673 244380 1 + 708 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.230106.peg.3027 CDS DS362247.1 244454 244825 2 + 372 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.230106.peg.3028 CDS DS362247.1 244860 245678 3 + 819 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.230106.peg.3029 CDS DS362247.1 245693 246247 2 + 555 DJ-1/YajL/PfpI superfamily, includes chaperone protein YajL (former ThiJ), parkinsonism-associated protein DJ-1, peptidases PfpI, Hsp31 - none -
fig|6666666.230106.peg.3030 CDS DS362247.1 246282 246956 3 + 675 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster;
Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230106.peg.3031 CDS DS362247.1 246977 249040 2 + 2064 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.230106.peg.3032 CDS DS362247.1 249172 249297 1 + 126 hypothetical protein - none -
fig|6666666.230106.peg.3033 CDS DS362247.1 249298 250179 1 + 882 Peptidase, M23/M37 family - none -
fig|6666666.230106.peg.3034 CDS DS362247.1 250318 250130 -1 - 189 FIG00411363: hypothetical protein - none -
fig|6666666.230106.peg.3035 CDS DS362247.1 250289 250831 2 + 543 FIG00651728: hypothetical protein - none -
fig|6666666.230106.peg.3036 CDS DS362247.1 250821 252113 3 + 1293 FIG00694335: hypothetical protein - none -
fig|6666666.230106.peg.3037 CDS DS362247.1 252179 252934 2 + 756 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.230106.peg.3038 CDS DS362247.1 253036 253494 1 + 459 FIG00898413: hypothetical protein - none -
fig|6666666.230106.peg.3039 CDS DS362247.1 253504 254091 1 + 588 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230106.peg.3040 CDS DS362247.1 256210 254114 -1 - 2097 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230106.peg.3041 CDS DS362247.1 259399 256295 -1 - 3105 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.3042 CDS DS362247.1 260665 259892 -1 - 774 Prephenate and/or arogenate dehydrogenase (unknown specificity) (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.230106.peg.3043 CDS DS362247.1 261696 260683 -3 - 1014 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54) / Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.230106.peg.3044 CDS DS362247.1 263140 261965 -1 - 1176 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Threonine and Homoserine Biosynthesis
fig|6666666.230106.peg.3045 CDS DS362247.1 263969 263121 -2 - 849 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.230106.peg.3046 CDS DS362247.1 264225 264076 -3 - 150 hypothetical protein - none -
fig|6666666.230106.peg.3047 CDS DS362247.1 265012 264263 -1 - 750 Probable secreted protein - none -
fig|6666666.230106.peg.3048 CDS DS362247.1 265993 265034 -1 - 960 TPR domain protein, putative component of TonB system Ton and Tol transport systems
fig|6666666.230106.peg.3049 CDS DS362247.1 268016 266106 -2 - 1911 ATP-dependent DNA helicase RecS (RecQ family) DNA repair, bacterial RecFOR pathway
fig|6666666.230106.peg.3050 CDS DS362247.1 269942 268227 -2 - 1716 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.230106.peg.3051 CDS DS362247.1 270138 270911 3 + 774 UPF0246 protein YaaA - none -
fig|6666666.230106.peg.3052 CDS DS362247.1 271059 272054 3 + 996 Phosphatidylinositol-specific phospholipase C (EC 4.6.1.13) Listeria Pathogenicity Island LIPI-1 extended
fig|6666666.230106.peg.3053 CDS DS362247.1 272138 272962 2 + 825 Hypothetical sugar kinase, ROK family - none -
fig|6666666.230106.peg.3054 CDS DS362247.1 273136 276318 1 + 3183 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.3055 CDS DS362247.1 276335 277978 2 + 1644 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.230106.peg.3056 CDS DS362247.1 278499 281111 3 + 2613 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230106.peg.3057 CDS DS362247.1 281223 281993 3 + 771 endonuclease/exonuclease/phosphatase family protein - none -
fig|6666666.230106.peg.3058 CDS DS362247.1 282037 283149 1 + 1113 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.230106.peg.3059 CDS DS362247.1 283171 284775 1 + 1605 Trehalase (EC 3.2.1.28) Trehalose Uptake and Utilization
fig|6666666.230106.peg.3060 CDS DS362247.1 284790 286241 3 + 1452 FIG00408452: hypothetical protein - none -
fig|6666666.230106.peg.3061 CDS DS362247.1 286238 288559 2 + 2322 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230106.peg.3062 CDS DS362247.1 288572 290020 2 + 1449 Putative phosphohydrolase, Icc family - none -
fig|6666666.230106.peg.3063 CDS DS362247.1 291194 290022 -2 - 1173 Xylose operon regulatory protein - none -
fig|6666666.230106.peg.3064 CDS DS362247.1 291696 291262 -3 - 435 4-hydroxybenzoyl-CoA thioesterase (EC 3.1.2.23) - none -
fig|6666666.230106.peg.3065 CDS DS362247.1 291777 292340 3 + 564 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.230106.peg.3066 CDS DS362247.1 292349 294139 2 + 1791 Chloride channel protein - none -
fig|6666666.230106.peg.3067 CDS DS362247.1 294288 294169 -3 - 120 hypothetical protein - none -
fig|6666666.230106.peg.3068 CDS DS362247.1 294313 295284 1 + 972 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.230106.peg.3069 CDS DS362247.1 295550 296200 2 + 651 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.230106.peg.3070 CDS DS362247.1 296259 298295 3 + 2037 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.230106.peg.3071 CDS DS362247.1 298382 299419 2 + 1038 FIG146085: 3-to-5 oligoribonuclease A, Bacillus type - none -
fig|6666666.230106.peg.3072 CDS DS362247.1 299523 300134 3 + 612 FIG00409304: hypothetical protein - none -
fig|6666666.230106.peg.3073 CDS DS362247.1 300160 301548 1 + 1389 Phosphomannomutase (EC 5.4.2.8) / Phosphoglucosamine mutase (EC 5.4.2.10) Bacterial checkpoint-control-related cluster;
Mannose Metabolism;
Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.230106.peg.3074 CDS DS362247.1 301648 303003 1 + 1356 Sodium:alanine symporter - none -
fig|6666666.230106.peg.3075 CDS DS362247.1 303523 303020 -1 - 504 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions
fig|6666666.230106.peg.3076 CDS DS362247.1 304758 303529 -3 - 1230 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230106.peg.3077 CDS DS362247.1 304886 306016 2 + 1131 putative DNA mismatch repair protein - none -
fig|6666666.230106.peg.3078 CDS DS362247.1 307554 306076 -3 - 1479 Serine/threonine protein kinase PrkC, regulator of stationary phase, short form Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.230106.peg.3079 CDS DS362247.1 308629 307571 -1 - 1059 Protein serine/threonine phosphatase PrpC, regulation of stationary phase Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.230106.peg.3080 CDS DS362247.1 310380 308638 -3 - 1743 hypothetical protein - none -
fig|6666666.230106.peg.3081 CDS DS362247.1 311671 310397 -1 - 1275 probable serine/threonine protein kinase, putative( EC:2.7.11.1 ) - none -
fig|6666666.230106.peg.3082 CDS DS362247.1 312498 311683 -3 - 816 FIG00416710: hypothetical protein - none -
fig|6666666.230106.peg.3083 CDS DS362247.1 313344 312580 -3 - 765 hypothetical protein - none -
fig|6666666.230106.peg.3084 CDS DS362247.1 314782 313337 -1 - 1446 serine/threonine protein kinase - none -
fig|6666666.230106.peg.3085 CDS DS362247.1 315141 317159 3 + 2019 Sensor histidine kinase - none -
fig|6666666.230106.peg.3086 CDS DS362247.1 317293 317156 -1 - 138 hypothetical protein - none -
fig|6666666.230106.peg.3087 CDS DS362247.1 317292 318044 3 + 753 Two-component system response regulator - none -
fig|6666666.230106.peg.3088 CDS DS362247.1 318536 318183 -2 - 354 FIG00402715: hypothetical protein - none -
fig|6666666.230106.peg.3089 CDS DS362247.1 319969 318827 -1 - 1143 FIG00402773: hypothetical protein - none -
fig|6666666.230106.peg.3090 CDS DS362247.1 322672 319985 -1 - 2688 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.3091 CDS DS362247.1 323244 322726 -3 - 519 FIG00418205: hypothetical protein - none -
fig|6666666.230106.peg.3092 CDS DS362247.1 324076 323531 -1 - 546 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.3093 CDS DS362247.1 325227 324097 -3 - 1131 Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent Heat shock dnaK gene cluster extended
fig|6666666.230106.peg.3094 CDS DS362247.1 325440 325553 3 + 114 hypothetical protein - none -
fig|6666666.230106.peg.3095 CDS DS362247.1 325733 326986 2 + 1254 FIG00939120: hypothetical protein - none -
fig|6666666.230106.peg.3096 CDS DS362247.1 326979 328310 3 + 1332 FIG00410552: hypothetical protein - none -
fig|6666666.230106.peg.3097 CDS DS362247.1 328328 329455 2 + 1128 Rhamnogalacturonides degradation protein RhiN D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230106.peg.3098 CDS DS362247.1 329566 331506 1 + 1941 Hypothetical glycoside hydrolase, family 43, similar to arabinosidase L-Arabinose utilization
fig|6666666.230106.peg.3099 CDS DS362247.1 331537 333483 1 + 1947 Beta-xylosidase (EC 3.2.1.37) Xylose utilization
fig|6666666.230106.peg.3100 CDS DS362247.1 333709 336252 1 + 2544 Alpha-N-arabinofuranosidase (EC 3.2.1.55) L-Arabinose utilization
fig|6666666.230106.peg.3101 CDS DS362247.1 336310 338301 1 + 1992 Putative glycosyl hydrolase of unknown function (DUF1680) - none -
fig|6666666.230106.peg.3102 CDS DS362247.1 338356 340305 1 + 1950 Alpha-N-arabinofuranosidase (EC 3.2.1.55) L-Arabinose utilization
fig|6666666.230106.peg.3103 CDS DS362247.1 340483 343578 1 + 3096 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.3104 CDS DS362247.1 344282 343704 -2 - 579 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.230106.peg.3105 CDS DS362247.1 344420 345640 2 + 1221 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.230106.peg.3106 CDS DS362247.1 347730 345637 -3 - 2094 putative helicase - none -
fig|6666666.230106.peg.3107 CDS DS362247.1 348744 348304 -3 - 441 hypothetical protein - none -
fig|6666666.230106.peg.3108 CDS DS362247.1 348964 351084 1 + 2121 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.3109 CDS DS362247.1 351060 353036 3 + 1977 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.3110 CDS DS362247.1 353179 356481 1 + 3303 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.3111 CDS DS362247.1 356493 358562 3 + 2070 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.3112 CDS DS362247.1 358661 359812 2 + 1152 Beta-glucanase - none -
fig|6666666.230106.peg.3113 CDS DS362247.1 360344 359772 -2 - 573 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.230106.peg.3114 CDS DS362247.1 360507 361688 3 + 1182 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230106.peg.3115 CDS DS362247.1 365123 361803 -2 - 3321 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.3116 CDS DS362247.1 366902 365271 -2 - 1632 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.230106.peg.3117 CDS DS362247.1 367291 369447 1 + 2157 Translation elongation factor G-related protein Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.230106.peg.3118 CDS DS362247.1 369748 371292 1 + 1545 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.230106.peg.3119 CDS DS362247.1 371298 371999 3 + 702 Transcriptional regulatory protein rprY - none -
fig|6666666.230106.peg.3120 CDS DS362247.1 372265 372089 -1 - 177 FIG00407300: hypothetical protein - none -
fig|6666666.230106.peg.3121 CDS DS362247.1 372912 372466 -3 - 447 Transcriptional regulator, MarR family - none -
fig|6666666.230106.peg.3122 CDS DS362247.1 373072 373416 1 + 345 SSU ribosomal protein S6p Ribosome SSU bacterial
fig|6666666.230106.peg.3123 CDS DS362247.1 373419 373691 3 + 273 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.230106.peg.3124 CDS DS362247.1 373707 374156 3 + 450 LSU ribosomal protein L9p - none -
fig|6666666.230106.peg.3125 CDS DS362247.1 374606 374421 -2 - 186 RNA binding protein - none -
fig|6666666.230106.peg.3126 CDS DS362247.1 374800 374937 1 + 138 hypothetical protein - none -
fig|6666666.230106.peg.3127 CDS DS362247.1 375194 375000 -2 - 195 FIG00405659: hypothetical protein - none -
fig|6666666.230106.peg.3128 CDS DS362247.1 377044 375371 -1 - 1674 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.230106.peg.3129 CDS DS362247.1 377130 378446 3 + 1317 tRNA-t(6)A37 methylthiotransferase Heat shock dnaK gene cluster extended;
Methylthiotransferases
fig|6666666.230106.peg.3130 CDS DS362247.1 378501 379400 3 + 900 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) - none -
fig|6666666.230106.peg.3131 CDS DS362247.1 379393 380409 1 + 1017 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230106.peg.3132 CDS DS362247.1 380457 380975 3 + 519 Methylglyoxal synthase (EC 4.2.3.3) Methylglyoxal Metabolism
fig|6666666.230106.peg.3133 CDS DS362247.1 381392 381604 2 + 213 hypothetical protein - none -
fig|6666666.230106.peg.3134 CDS DS362247.1 381994 381629 -1 - 366 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.230106.peg.3135 CDS DS362247.1 382343 383578 2 + 1236 Mobile element protein - none -
fig|6666666.230106.peg.3136 CDS DS362247.1 383591 383953 2 + 363 FIG00417797: hypothetical protein - none -
fig|6666666.230106.peg.3137 CDS DS362247.1 384338 384033 -2 - 306 FIG00407580: hypothetical protein - none -
fig|6666666.230106.peg.3138 CDS DS362247.1 384676 384371 -1 - 306 FIG00938698: hypothetical protein - none -
fig|6666666.230106.peg.3139 CDS DS362247.1 384833 385234 2 + 402 FIG00936922: hypothetical protein - none -
fig|6666666.230106.peg.3140 CDS DS362247.1 385238 385588 2 + 351 FIG00938987: hypothetical protein - none -
fig|6666666.230106.peg.3141 CDS DS362247.1 385609 387198 1 + 1590 FIG00937566: hypothetical protein - none -
fig|6666666.230106.peg.3142 CDS DS362247.1 387258 389369 3 + 2112 DNA topoisomerase III, Bacteroidales-type (EC 5.99.1.2) DNA topoisomerases, Type I, ATP-independent
fig|6666666.230106.peg.3143 CDS DS362247.1 389538 389990 3 + 453 FIG00936811: hypothetical protein - none -
fig|6666666.230106.peg.3144 CDS DS362247.1 389980 395760 1 + 5781 putative DNA methylase - none -
fig|6666666.230106.peg.3145 CDS DS362247.1 395930 397060 2 + 1131 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.3146 CDS DS362247.1 397297 398397 1 + 1101 FIG00415902: hypothetical protein - none -
fig|6666666.230106.peg.3147 CDS DS362247.1 398414 399301 2 + 888 hypothetical protein - none -
fig|6666666.230106.peg.3148 CDS DS362247.1 399401 400288 2 + 888 hypothetical protein - none -
fig|6666666.230106.peg.3149 CDS DS362248.1 262 1143 1 + 882 hypothetical protein - none -
fig|6666666.230106.peg.3150 CDS DS362248.1 4250 1194 -2 - 3057 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.3151 CDS DS362248.1 5341 4325 -1 - 1017 L-rhamnose-proton symporter - none -
fig|6666666.230106.peg.3152 CDS DS362248.1 6783 5377 -3 - 1407 Unknown pentose isomerase TM0951 - none -
fig|6666666.230106.peg.3153 CDS DS362248.1 8318 6840 -2 - 1479 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230106.peg.3154 CDS DS362248.1 9290 8367 -2 - 924 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.230106.peg.3155 CDS DS362248.1 10125 9292 -3 - 834 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.230106.peg.3156 CDS DS362248.1 10380 10994 3 + 615 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.230106.peg.3157 CDS DS362248.1 11002 11763 1 + 762 Unknown pentose utilization regulator, DeoR family - none -
fig|6666666.230106.peg.3158 CDS DS362248.1 13369 11843 -1 - 1527 MutS-related protein, family 1 DNA repair, bacterial MutL-MutS system
fig|6666666.230106.peg.3159 CDS DS362248.1 13508 14611 2 + 1104 Endo-1,4-beta-xylanase D - none -
fig|6666666.230106.peg.3160 CDS DS362248.1 16690 14693 -1 - 1998 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.3161 CDS DS362248.1 16935 20945 3 + 4011 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.3162 CDS DS362248.1 21065 24241 2 + 3177 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.3163 CDS DS362248.1 24351 25907 3 + 1557 FIG00415907: hypothetical protein - none -
fig|6666666.230106.peg.3164 CDS DS362248.1 25948 27405 1 + 1458 FIG00412418: hypothetical protein - none -
fig|6666666.230106.peg.3165 CDS DS362248.1 27536 28969 2 + 1434 endo-beta-1,4-glucanase (celulase B) - none -
fig|6666666.230106.peg.3166 CDS DS362248.1 29001 31073 3 + 2073 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230106.peg.3167 CDS DS362248.1 31070 34795 2 + 3726 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.3168 CDS DS362248.1 34801 36882 1 + 2082 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.3169 CDS DS362248.1 36905 40012 2 + 3108 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.3170 CDS DS362248.1 40070 41686 2 + 1617 Alpha-L-fucosidase (EC 3.2.1.51) - none -
fig|6666666.230106.peg.3171 CDS DS362248.1 41701 44091 1 + 2391 Alpha-xylosidase (EC 3.2.1.-) Xylose utilization
fig|6666666.230106.peg.3172 CDS DS362248.1 44141 46981 2 + 2841 Sialic acid-specific 9-O-acetylesterase - none -
fig|6666666.230106.peg.3173 CDS DS362248.1 47140 47265 1 + 126 hypothetical protein - none -
fig|6666666.230106.peg.3174 CDS DS362248.1 47403 50084 3 + 2682 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.230106.peg.3175 CDS DS362248.1 50146 51000 1 + 855 FIG00415187: hypothetical protein - none -
fig|6666666.230106.peg.3176 CDS DS362248.1 51045 52061 3 + 1017 Carboxyl-terminal protease-related protein - none -
fig|6666666.230106.peg.3177 CDS DS362248.1 52412 55252 2 + 2841 FIG00402975: hypothetical protein - none -
fig|6666666.230106.peg.3178 CDS DS362248.1 55461 58454 3 + 2994 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.3179 CDS DS362248.1 58473 60023 3 + 1551 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.3180 CDS DS362248.1 60036 62135 3 + 2100 Arabinan endo-1,5-alpha-L-arabinosidase A - none -
fig|6666666.230106.peg.3181 CDS DS362248.1 62153 63544 2 + 1392 FIG01018870: hypothetical protein - none -
fig|6666666.230106.peg.3182 CDS DS362248.1 63664 65955 1 + 2292 Periplasmic beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.3183 CDS DS362248.1 66093 69128 3 + 3036 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.3184 CDS DS362248.1 69209 70729 2 + 1521 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.3185 CDS DS362248.1 71045 73381 2 + 2337 Periplasmic beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.3186 CDS DS362248.1 73521 74285 3 + 765 endonuclease/exonuclease/phosphatase family protein - none -
fig|6666666.230106.peg.3187 CDS DS362248.1 74300 75664 2 + 1365 Periplasmic beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.3188 CDS DS362248.1 78283 75752 -1 - 2532 putative TonB-dependent receptor - none -
fig|6666666.230106.peg.3189 CDS DS362248.1 79729 78434 -1 - 1296 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.3190 CDS DS362248.1 80231 79764 -2 - 468 FIG00937621: hypothetical protein - none -
fig|6666666.230106.peg.3191 CDS DS362248.1 80385 80251 -3 - 135 hypothetical protein - none -
fig|6666666.230106.peg.3192 CDS DS362248.1 81581 80466 -2 - 1116 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.230106.peg.3193 CDS DS362248.1 82322 81696 -2 - 627 FIG00407210: hypothetical protein - none -
fig|6666666.230106.peg.3194 CDS DS362248.1 83848 82445 -1 - 1404 FIG00897321: hypothetical protein - none -
fig|6666666.230106.peg.3195 CDS DS362248.1 85080 83854 -3 - 1227 N-acetylglucosamine related transporter, NagX - none -
fig|6666666.230106.peg.3196 CDS DS362248.1 87545 85092 -2 - 2454 glycosyl hydrolase, family 9 - none -
fig|6666666.230106.peg.3197 CDS DS362248.1 88713 87628 -3 - 1086 FIG00406036: hypothetical protein - none -
fig|6666666.230106.peg.3198 CDS DS362248.1 90449 88842 -2 - 1608 hypothetical protein - none -
fig|6666666.230106.peg.3199 CDS DS362248.1 93548 90459 -2 - 3090 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.3200 CDS DS362248.1 96071 94266 -2 - 1806 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) - none -
fig|6666666.230106.peg.3201 CDS DS362248.1 96283 96906 1 + 624 FIG00414346: hypothetical protein - none -
fig|6666666.230106.peg.3202 CDS DS362248.1 96997 98067 1 + 1071 Acetylornithine deacetylase (EC 3.5.1.16) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230106.peg.3203 CDS DS362248.1 99376 98075 -1 - 1302 TolA protein Ton and Tol transport systems
fig|6666666.230106.peg.3204 CDS DS362248.1 100013 99426 -2 - 588 FIG00406555: hypothetical protein - none -
fig|6666666.230106.peg.3205 CDS DS362248.1 101811 99991 -3 - 1821 FIG00898077: hypothetical protein - none -
fig|6666666.230106.peg.3206 CDS DS362248.1 102325 101888 -1 - 438 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.230106.peg.3207 CDS DS362248.1 102535 103863 1 + 1329 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.230106.peg.3208 CDS DS362248.1 104869 103892 -1 - 978 Hemolysin A - none -
fig|6666666.230106.peg.3209 CDS DS362248.1 105731 104913 -2 - 819 Hemolysin A - none -
fig|6666666.230106.peg.3210 CDS DS362248.1 105947 106450 2 + 504 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.3211 CDS DS362248.1 106827 107330 3 + 504 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.3212 CDS DS362248.1 107457 108920 3 + 1464 FIG00937589: hypothetical protein - none -
fig|6666666.230106.peg.3213 CDS DS362248.1 109340 109104 -2 - 237 hypothetical protein - none -
fig|6666666.230106.peg.3214 CDS DS362248.1 109442 109918 2 + 477 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.230106.peg.3215 CDS DS362248.1 109929 110849 3 + 921 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.230106.peg.3216 CDS DS362248.1 110859 111209 3 + 351 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.230106.peg.3217 CDS DS362248.1 111297 113435 3 + 2139 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.230106.peg.3218 CDS DS362248.1 113481 114929 3 + 1449 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.230106.peg.3219 CDS DS362248.1 115052 116320 2 + 1269 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.230106.peg.3220 CDS DS362248.1 116419 117750 1 + 1332 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.230106.peg.3221 CDS DS362248.1 117878 119158 2 + 1281 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.230106.peg.3222 CDS DS362248.1 119207 120481 2 + 1275 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.230106.peg.3223 CDS DS362248.1 120551 121996 2 + 1446 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.230106.peg.3224 CDS DS362248.1 121989 122726 3 + 738 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.230106.peg.3225 CDS DS362248.1 122810 124243 2 + 1434 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.230106.peg.3226 CDS DS362248.1 124277 125590 2 + 1314 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.230106.peg.3227 CDS DS362248.1 125660 126109 2 + 450 Transamidase GatB domain protein Macromolecular synthesis operon
fig|6666666.230106.peg.3228 CDS DS362248.1 127175 126447 -2 - 729 DNA recombination and repair protein RecO DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.230106.peg.3229 CDS DS362248.1 127577 127831 2 + 255 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.230106.peg.3230 CDS DS362248.1 128037 129998 3 + 1962 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.230106.peg.3231 CDS DS362248.1 130704 130123 -3 - 582 FIG00937271: hypothetical protein - none -
fig|6666666.230106.peg.3232 CDS DS362248.1 132310 130817 -1 - 1494 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.230106.peg.3233 CDS DS362248.1 132543 133469 3 + 927 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.230106.peg.3234 CDS DS362248.1 133764 133579 -3 - 186 hypothetical protein - none -
fig|6666666.230106.peg.3235 CDS DS362248.1 138435 134716 -3 - 3720 Beta-mannosidase (EC 3.2.1.25) Mannose Metabolism
fig|6666666.230106.peg.3236 CDS DS362248.1 139632 138448 -3 - 1185 Mannan endo-1,4-beta-mannosidase - none -
fig|6666666.230106.peg.3237 CDS DS362248.1 140031 139651 -3 - 381 hypothetical protein - none -
fig|6666666.230106.peg.3238 CDS DS362248.1 141793 140048 -1 - 1746 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.3239 CDS DS362248.1 144853 141812 -1 - 3042 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.3240 CDS DS362248.1 146233 145013 -1 - 1221 N-acylglucosamine 2-epimerase (EC 5.1.3.8) Sialic Acid Metabolism
fig|6666666.230106.peg.3241 CDS DS362248.1 147480 148625 3 + 1146 Transposase, IS4 - none -
fig|6666666.230106.peg.3242 CDS DS362248.1 149383 149270 -1 - 114 hypothetical protein - none -
fig|6666666.230106.peg.3243 CDS DS362248.1 149535 149729 3 + 195 FIG00896454: hypothetical protein - none -
fig|6666666.230106.peg.3244 CDS DS362248.1 150340 149732 -1 - 609 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.230106.peg.3245 CDS DS362248.1 150507 152060 3 + 1554 FIG00404818: hypothetical protein - none -
fig|6666666.230106.peg.3246 CDS DS362248.1 153098 156175 2 + 3078 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.3247 CDS DS362248.1 156204 157739 3 + 1536 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.3248 CDS DS362248.1 157893 159875 3 + 1983 Putative isomerase - none -
fig|6666666.230106.peg.3249 CDS DS362248.1 159945 163181 3 + 3237 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.3250 CDS DS362248.1 163283 163561 2 + 279 FIG00407176: hypothetical protein - none -
fig|6666666.230106.peg.3251 CDS DS362248.1 163558 164160 1 + 603 putative surface protein - none -
fig|6666666.230106.peg.3252 CDS DS362248.1 164233 167376 1 + 3144 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.3253 CDS DS362248.1 167397 169325 3 + 1929 Putative isomerase - none -
fig|6666666.230106.peg.3254 CDS DS362248.1 170562 169480 -3 - 1083 Butyrate kinase (EC 2.7.2.7) - none -
fig|6666666.230106.peg.3255 CDS DS362248.1 171527 170607 -2 - 921 phosphotransbutyrylase (EC 2.3.1.19) - none -
fig|6666666.230106.peg.3256 CDS DS362248.1 171785 172723 2 + 939 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230106.peg.3257 CDS DS362248.1 172720 173733 1 + 1014 Aminopeptidase Y (Arg, Lys, Leu preference) (EC 3.4.11.15) Aminopeptidases (EC 3.4.11.-)
fig|6666666.230106.peg.3258 CDS DS362248.1 173768 174193 2 + 426 Sulfur acceptor protein SufE for iron-sulfur cluster assembly Iron-sulfur cluster assembly
fig|6666666.230106.peg.3259 CDS DS362248.1 174527 174709 2 + 183 hypothetical protein - none -
fig|6666666.230106.peg.3260 CDS DS362248.1 174832 175122 1 + 291 Mobile element protein - none -
fig|6666666.230106.peg.3261 CDS DS362248.1 175079 175693 2 + 615 Mobile element protein - none -
fig|6666666.230106.peg.3262 CDS DS362248.1 176292 176089 -3 - 204 Transcriptional regulator - none -
fig|6666666.230106.peg.3263 CDS DS362248.1 176529 176311 -3 - 219 hypothetical protein - none -
fig|6666666.230106.peg.3264 CDS DS362248.1 176966 176550 -2 - 417 hypothetical protein - none -
fig|6666666.230106.peg.3265 CDS DS362248.1 177691 177050 -1 - 642 FIG00403233: hypothetical protein - none -
fig|6666666.230106.peg.3266 CDS DS362248.1 178312 177707 -1 - 606 FIG00403233: hypothetical protein - none -
fig|6666666.230106.peg.3267 CDS DS362248.1 179004 178336 -3 - 669 FIG00403233: hypothetical protein - none -
fig|6666666.230106.peg.3268 CDS DS362248.1 179792 179001 -2 - 792 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.230106.peg.3269 CDS DS362248.1 180458 179973 -2 - 486 FIG00418137: hypothetical protein - none -
fig|6666666.230106.peg.3270 CDS DS362248.1 181622 180681 -2 - 942 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) CBSS-350688.3.peg.1509;
CBSS-350688.3.peg.1509;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.230106.peg.3271 CDS DS362248.1 182229 181606 -3 - 624 Haloacid dehalogenase-like hydrolase - none -
fig|6666666.230106.peg.3272 CDS DS362248.1 184913 182229 -2 - 2685 Calcium-transporting ATPase - none -
fig|6666666.230106.peg.3273 CDS DS362248.1 186170 185004 -2 - 1167 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.3274 CDS DS362248.1 186278 186439 2 + 162 Rubredoxin Rubrerythrin
fig|6666666.230106.peg.3275 CDS DS362248.1 188133 186436 -3 - 1698 Sodium-dependent phosphate transporter NhaA, NhaD and Sodium-dependent phosphate transporters;
Phosphate metabolism
fig|6666666.230106.peg.3276 CDS DS362248.1 188217 189890 3 + 1674 Uridine kinase (EC 2.7.1.48) - none -
fig|6666666.230106.peg.3277 CDS DS362248.1 189933 191438 3 + 1506 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.3278 CDS DS362248.1 192913 191540 -1 - 1374 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-)
fig|6666666.230106.peg.3279 CDS DS362248.1 193241 194731 2 + 1491 RNA polymerase sigma-54 factor RpoN Transcription initiation, bacterial sigma factors
fig|6666666.230106.peg.3280 CDS DS362248.1 194825 195487 2 + 663 FIG00937061: hypothetical protein - none -
fig|6666666.230106.peg.3281 CDS DS362248.1 195556 195936 1 + 381 Glycine cleavage system H protein CBSS-315749.4.peg.3658;
Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.230106.peg.3282 CDS DS362248.1 196077 196562 3 + 486 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.230106.peg.3283 CDS DS362248.1 196661 198529 2 + 1869 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.230106.peg.3284 CDS DS362248.1 199534 198533 -1 - 1002 putative secreted protein - none -
fig|6666666.230106.peg.3285 CDS DS362248.1 200310 199531 -3 - 780 FIG00653406: hypothetical protein - none -
fig|6666666.230106.peg.3286 CDS DS362248.1 200468 200322 -2 - 147 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230106.peg.3287 CDS DS362248.1 201982 200465 -1 - 1518 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230106.peg.3288 CDS DS362248.1 203705 202002 -2 - 1704 Arabinan endo-1,5-alpha-L-arabinosidase A - none -
fig|6666666.230106.peg.3289 CDS DS362248.1 205556 203823 -2 - 1734 Arabinan endo-1,5-alpha-L-arabinosidase A - none -
fig|6666666.230106.peg.3290 CDS DS362248.1 207181 205613 -1 - 1569 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230106.peg.3291 CDS DS362248.1 209482 207212 -1 - 2271 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.3292 CDS DS362248.1 210345 209494 -3 - 852 endonuclease/exonuclease/phosphatase family protein - none -
fig|6666666.230106.peg.3293 CDS DS362248.1 211739 210408 -2 - 1332 FIG00908315: hypothetical protein - none -
fig|6666666.230106.peg.3294 CDS DS362248.1 213321 211807 -3 - 1515 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.3295 CDS DS362248.1 216346 213341 -1 - 3006 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.3296 CDS DS362248.1 217672 216521 -1 - 1152 hypothetical protein - none -
fig|6666666.230106.peg.3297 CDS DS362248.1 219274 217697 -1 - 1578 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230106.peg.3298 CDS DS362248.1 220633 219287 -1 - 1347 Arylsulfatase (EC 3.1.6.1) Galactosylceramide and Sulfatide metabolism
fig|6666666.230106.peg.3299 CDS DS362248.1 221848 220652 -1 - 1197 FIG00414347: hypothetical protein - none -
fig|6666666.230106.peg.3300 CDS DS362248.1 223449 221884 -3 - 1566 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230106.peg.3301 CDS DS362248.1 226148 223497 -2 - 2652 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.3302 CDS DS362248.1 228592 226301 -1 - 2292 Periplasmic beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.3303 CDS DS362248.1 231441 228760 -3 - 2682 FIG00415464: hypothetical protein - none -
fig|6666666.230106.peg.3304 CDS DS362248.1 231762 231607 -3 - 156 hypothetical protein - none -
fig|6666666.230106.peg.3305 CDS DS362248.1 233161 231719 -1 - 1443 FIG00415875: hypothetical protein - none -
fig|6666666.230106.peg.3306 CDS DS362248.1 235010 233271 -2 - 1740 Putative carboxy-terminal processing protease (EC 3.4.21.102) - none -
fig|6666666.230106.peg.3307 CDS DS362248.1 236129 235146 -2 - 984 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.230106.peg.3308 CDS DS362248.1 236471 237076 2 + 606 hypothetical protein - none -
fig|6666666.230106.peg.3309 CDS DS362248.1 237662 237078 -2 - 585 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
CBSS-216591.1.peg.168
fig|6666666.230106.peg.3310 CDS DS362248.1 238611 237814 -3 - 798 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.230106.peg.3311 CDS DS362248.1 239088 238621 -3 - 468 hypothetical protein - none -
fig|6666666.230106.peg.3312 CDS DS362248.1 239932 239330 -1 - 603 putative DNA-binding protein - none -
fig|6666666.230106.peg.3313 CDS DS362248.1 240237 241349 3 + 1113 COG0457: FOG: TPR repeat - none -
fig|6666666.230106.peg.3314 CDS DS362248.1 241603 243429 1 + 1827 hypothetical protein - none -
fig|6666666.230106.peg.3315 CDS DS362248.1 243649 244128 1 + 480 FIG00413911: hypothetical protein - none -
fig|6666666.230106.peg.3316 CDS DS362248.1 244691 244200 -2 - 492 DNA polymerase III epsilon subunit (EC 2.7.7.7) - none -
fig|6666666.230106.peg.3317 CDS DS362248.1 244798 245337 1 + 540 Nudix hydrolase family protein - none -
fig|6666666.230106.peg.3318 CDS DS362248.1 245442 248486 3 + 3045 TPR-domain containing protein - none -
fig|6666666.230106.peg.3319 CDS DS362248.1 248502 250133 3 + 1632 putative TonB-dependent receptor - none -
fig|6666666.230106.peg.3320 CDS DS362248.1 250279 252681 1 + 2403 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.230106.peg.3321 CDS DS362248.1 254640 252823 -3 - 1818 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.230106.peg.3322 CDS DS362248.1 255062 254796 -2 - 267 DNA-binding protein HU-beta DNA structural proteins, bacterial
fig|6666666.230106.peg.3323 CDS DS362248.1 255270 255103 -3 - 168 FIG00416267: hypothetical protein - none -
fig|6666666.230106.peg.3324 CDS DS362248.1 255309 255992 3 + 684 GlpG protein (membrane protein of glp regulon) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.230106.peg.3325 CDS DS362248.1 255973 256863 1 + 891 GlpG protein (membrane protein of glp regulon) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.230106.peg.3326 CDS DS362248.1 256956 258056 3 + 1101 AP endonuclease domain protein - none -
fig|6666666.230106.peg.3327 CDS DS362248.1 258131 260176 2 + 2046 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.230106.peg.3328 CDS DS362248.1 260260 263259 1 + 3000 Protein-export membrane protein SecD (TC 3.A.5.1.1) / Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832;
CBSS-211586.1.peg.2832
fig|6666666.230106.peg.3329 CDS DS362248.1 264980 263718 -2 - 1263 Outer membrane efflux protein - none -
fig|6666666.230106.peg.3330 CDS DS362248.1 266439 265021 -3 - 1419 hypothetical protein-signal peptide and transmembrane prediction - none -
fig|6666666.230106.peg.3331 CDS DS362248.1 269591 266436 -2 - 3156 Transporter, AcrB/D/F family - none -
fig|6666666.230106.peg.3332 CDS DS362248.1 270715 269591 -1 - 1125 Membrane-fusion protein - none -
fig|6666666.230106.peg.3333 CDS DS362248.1 270801 271682 3 + 882 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.3334 CDS DS362248.1 273413 271701 -2 - 1713 Regulatory protein SusR Cellulosome
fig|6666666.230106.peg.3335 CDS DS362248.1 273714 273863 3 + 150 hypothetical protein - none -
fig|6666666.230106.peg.3336 CDS DS362248.1 274191 277418 3 + 3228 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.3337 CDS DS362248.1 277579 279222 1 + 1644 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.3338 CDS DS362248.1 279258 280412 3 + 1155 hypothetical protein - none -
fig|6666666.230106.peg.3339 CDS DS362248.1 280612 283002 1 + 2391 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.3340 CDS DS362248.1 283089 285410 3 + 2322 Periplasmic beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.3341 CDS DS362248.1 285436 286848 1 + 1413 Endoglucanase (EC 3.2.1.4) Mannose Metabolism
fig|6666666.230106.peg.3342 CDS DS362248.1 286937 289393 2 + 2457 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.3343 CDS DS362248.1 289393 291699 1 + 2307 Alfa-L-rhamnosidase (EC 3.2.1.40) - none -
fig|6666666.230106.peg.3344 CDS DS362248.1 292183 294030 1 + 1848 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) - none -
fig|6666666.230106.peg.3345 CDS DS362248.1 294130 295134 1 + 1005 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) - none -
fig|6666666.230106.peg.3346 CDS DS362248.1 295489 295656 1 + 168 FIG00418218: hypothetical protein - none -
fig|6666666.230106.peg.3347 CDS DS362248.1 295818 299135 3 + 3318 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.3348 CDS DS362248.1 299167 300849 1 + 1683 FIG00416872: hypothetical protein - none -
fig|6666666.230106.peg.3349 CDS DS362248.1 301151 302659 2 + 1509 D-alanine--poly(phosphoribitol) ligase subunit 1 (EC 6.1.1.13) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230106.peg.3350 CDS DS362248.1 302668 302910 1 + 243 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230106.peg.3351 CDS DS362248.1 302914 304302 1 + 1389 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) - none -
fig|6666666.230106.peg.3352 CDS DS362248.1 304318 305403 1 + 1086 FIG00416332: hypothetical protein - none -
fig|6666666.230106.peg.3353 CDS DS362248.1 306298 307905 1 + 1608 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) Pyruvate metabolism I: anaplerotic reactions, PEP;
Serine-glyoxylate cycle
fig|6666666.230106.peg.3354 CDS DS362248.1 308061 308690 3 + 630 putative NADH dehydrogenase/NAD(P)H nitroreductase - none -
fig|6666666.230106.peg.3355 CDS DS362248.1 310580 308781 -2 - 1800 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.230106.peg.3356 CDS DS362248.1 310739 311008 2 + 270 SSU ribosomal protein S15p (S13e) CBSS-350688.3.peg.1509;
Ribosome SSU bacterial
fig|6666666.230106.peg.3357 CDS DS362248.1 311144 311028 -2 - 117 hypothetical protein - none -
fig|6666666.230106.peg.3358 CDS DS362248.1 311152 311988 1 + 837 FIG00415662: hypothetical protein - none -
fig|6666666.230106.peg.3359 CDS DS362248.1 312053 312490 2 + 438 FIG00416879: hypothetical protein - none -
fig|6666666.230106.peg.3360 CDS DS362248.1 312547 314958 1 + 2412 putative TonB-dependent receptor - none -
fig|6666666.230106.peg.3361 CDS DS362248.1 315136 315711 1 + 576 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.230106.peg.3362 CDS DS362248.1 315799 317445 1 + 1647 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.230106.peg.3363 CDS DS362248.1 318042 317551 -3 - 492 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230106.peg.3364 CDS DS362248.1 318747 318067 -3 - 681 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.230106.peg.3365 CDS DS362248.1 318916 318803 -1 - 114 hypothetical protein - none -
fig|6666666.230106.peg.3366 CDS DS362248.1 319016 321526 2 + 2511 FIG00896840: hypothetical protein - none -
fig|6666666.230106.peg.3367 CDS DS362248.1 321933 322058 3 + 126 hypothetical protein - none -
fig|6666666.230106.peg.3368 CDS DS362248.1 322221 322553 3 + 333 Ribosome-binding factor A CBSS-138119.3.peg.2719;
CBSS-350688.3.peg.1509;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.230106.peg.3369 CDS DS362248.1 322553 323788 2 + 1236 Lipoprotein releasing system transmembrane protein LolC Lipoprotein sorting system
fig|6666666.230106.peg.3370 CDS DS362248.1 324426 323797 -3 - 630 O-methyltransferase family protein [C1] - none -
fig|6666666.230106.peg.3371 CDS DS362248.1 326002 324545 -1 - 1458 Pyruvate kinase (EC 2.7.1.40) Entner-Doudoroff Pathway;
Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230106.peg.3372 CDS DS362248.1 326442 326023 -3 - 420 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.230106.peg.3373 CDS DS362248.1 326561 327514 2 + 954 Phage integrase - none -
fig|6666666.230106.peg.3374 CDS DS362248.1 327651 329345 3 + 1695 Immunoreactive 53 kDa antigen PG123 - none -
fig|6666666.230106.peg.3375 CDS DS362248.1 329457 330530 3 + 1074 Thiol:disulfide interchange protein - none -
fig|6666666.230106.peg.3376 CDS DS362248.1 330568 332106 1 + 1539 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.230106.peg.3377 CDS DS362248.1 334917 332233 -3 - 2685 Trehalose-6-phosphate hydrolase - none -
fig|6666666.230106.peg.3378 CDS DS362248.1 336140 334971 -2 - 1170 FIG00414347: hypothetical protein - none -
fig|6666666.230106.peg.3379 CDS DS362248.1 338330 336204 -2 - 2127 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230106.peg.3380 CDS DS362248.1 340461 338656 -3 - 1806 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.3381 CDS DS362248.1 343627 340490 -1 - 3138 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.3382 CDS DS362248.1 345231 343789 -3 - 1443 FIG00411211: hypothetical protein - none -
fig|6666666.230106.peg.3383 CDS DS362248.1 346326 345370 -3 - 957 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.230106.peg.3384 CDS DS362248.1 347331 346327 -3 - 1005 L-rhamnose-proton symporter - none -
fig|6666666.230106.peg.3385 CDS DS362248.1 349576 347486 -1 - 2091 FIG00411497: hypothetical protein - none -
fig|6666666.230106.peg.3386 CDS DS362248.1 352210 349658 -1 - 2553 Alpha-mannosidase (EC 3.2.1.24) Mannose Metabolism
fig|6666666.230106.peg.3387 CDS DS362248.1 356304 352276 -3 - 4029 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.3388 CDS DS362248.1 358501 356438 -1 - 2064 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.230106.peg.3389 CDS DS362248.1 358670 359602 2 + 933 FIG00413160: hypothetical protein - none -
fig|6666666.230106.peg.3390 CDS DS362248.1 360608 359589 -2 - 1020 two-component sensor kinase - none -
fig|6666666.230106.peg.3391 CDS DS362248.1 360975 360619 -3 - 357 Two-component system response regulator - none -
fig|6666666.230106.peg.3392 CDS DS362248.1 361377 360991 -3 - 387 Two-component system response regulator - none -
fig|6666666.230106.peg.3393 CDS DS362248.1 362351 361443 -2 - 909 FIG00418272: hypothetical protein - none -
fig|6666666.230106.peg.3394 CDS DS362248.1 362342 362524 2 + 183 hypothetical protein - none -
fig|6666666.230106.peg.3395 CDS DS362248.1 362598 363038 3 + 441 FIG00414833: hypothetical protein - none -
fig|6666666.230106.peg.3396 CDS DS362248.1 364311 363451 -3 - 861 Mobile element protein - none -
fig|6666666.230106.peg.3397 CDS DS362248.1 364616 364434 -2 - 183 hypothetical protein - none -
fig|6666666.230106.peg.3398 CDS DS362248.1 365753 364902 -2 - 852 hypothetical protein - none -
fig|6666666.230106.peg.3399 CDS DS362248.1 365920 367962 1 + 2043 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.230106.peg.3400 CDS DS362248.1 368055 369500 3 + 1446 Lipopolysaccharide biosynthesis protein WzxC - none -
fig|6666666.230106.peg.3401 CDS DS362248.1 369497 370402 2 + 906 FIG00417891: hypothetical protein - none -
fig|6666666.230106.peg.3402 CDS DS362248.1 370477 371874 1 + 1398 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster;
Teichoic and lipoteichoic acids biosynthesis
fig|6666666.230106.peg.3403 CDS DS362248.1 371871 372686 3 + 816 Lipopolysaccharide cholinephosphotransferase LicD1 (EC 2.7.8.-) - none -
fig|6666666.230106.peg.3404 CDS DS362248.1 372683 373699 2 + 1017 protein containing nucleotide-diphospho-sugar transferase domain - none -
fig|6666666.230106.peg.3405 CDS DS362248.1 373740 375005 3 + 1266 Glycosyl transferase, group 1 family protein - none -
fig|6666666.230106.peg.3406 CDS DS362248.1 374998 375744 1 + 747 Glycosyl transferase, group 2 family protein - none -
fig|6666666.230106.peg.3407 CDS DS362248.1 375792 375914 3 + 123 hypothetical protein - none -
fig|6666666.230106.peg.3408 CDS DS362248.1 376726 376010 -1 - 717 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.230106.peg.3409 CDS DS362248.1 376909 377502 1 + 594 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.230106.peg.3410 CDS DS362248.1 377542 378387 1 + 846 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.230106.peg.3411 CDS DS362248.1 378618 379082 3 + 465 Transcriptional regulator, AsnC family - none -
fig|6666666.230106.peg.3412 CDS DS362248.1 379092 379403 3 + 312 conserved hypothetical protein, putative membrane protein - none -
fig|6666666.230106.peg.3413 CDS DS362248.1 379765 379938 1 + 174 hypothetical protein - none -
fig|6666666.230106.peg.3414 CDS DS362248.1 380278 380415 1 + 138 hypothetical protein - none -
fig|6666666.230106.peg.3415 CDS DS362248.1 380682 380795 3 + 114 DNA repair protein RadC Bacterial cell division cluster;
DNA repair, bacterial
fig|6666666.230106.peg.3416 CDS DS362248.1 380792 381061 2 + 270 Mobile element protein - none -
fig|6666666.230106.peg.3417 CDS DS362248.1 381491 381910 2 + 420 hypothetical protein - none -
fig|6666666.230106.peg.3418 CDS DS362248.1 382676 382038 -2 - 639 FIG00410926: hypothetical protein - none -
fig|6666666.230106.peg.3419 CDS DS362248.1 383005 382673 -1 - 333 hypothetical protein - none -
fig|6666666.230106.peg.3420 CDS DS362248.1 383344 383760 1 + 417 hypothetical protein - none -
fig|6666666.230106.peg.3421 CDS DS362248.1 384181 384333 1 + 153 Putative two-component system response regulator, no kinase domain - none -
fig|6666666.230106.peg.3422 CDS DS362248.1 384411 384641 3 + 231 Putative two-component system response regulator, no kinase domain - none -
fig|6666666.230106.peg.3423 CDS DS362248.1 385044 385193 3 + 150 hypothetical protein - none -
fig|6666666.230106.peg.3424 CDS DS362248.1 385290 385727 3 + 438 hypothetical protein - none -
fig|6666666.230106.peg.3425 CDS DS362248.1 385730 386944 2 + 1215 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) @ Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Na+ translocating decarboxylases and related biotin-dependent enzymes;
Propionyl-CoA to Succinyl-CoA Module;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230106.peg.3426 CDS DS362248.1 387012 388235 3 + 1224 FIG00414220: hypothetical protein - none -
fig|6666666.230106.peg.3427 CDS DS362248.1 388237 389004 1 + 768 D-alanyl-D-alanine dipeptidase (EC 3.4.13.22) - none -
fig|6666666.230106.peg.3428 CDS DS362248.1 389224 390471 1 + 1248 SAM-dependent methyltransferases - none -
fig|6666666.230106.peg.3429 CDS DS362248.1 390745 393513 1 + 2769 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.3430 CDS DS362248.1 393574 394503 1 + 930 Tartrate-resistant acid phosphatase type 5 precursor (EC 3.1.3.2) - none -
fig|6666666.230106.peg.3431 CDS DS362248.1 394686 395975 3 + 1290 FIG00407002: hypothetical protein - none -
fig|6666666.230106.peg.3432 CDS DS362248.1 397790 395985 -2 - 1806 Mechanosensitive ion channel family protein - none -
fig|6666666.230106.peg.3433 CDS DS362248.1 397959 398939 3 + 981 Sodium-calcium exchanger - none -
fig|6666666.230106.peg.3434 CDS DS362248.1 399090 400226 3 + 1137 FIG00935709: hypothetical protein - none -
fig|6666666.230106.peg.3435 CDS DS362248.1 400344 402278 3 + 1935 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.230106.peg.3436 CDS DS362248.1 402275 402733 2 + 459 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.230106.peg.3437 CDS DS362248.1 402777 404399 3 + 1623 Carboxy-terminal processing protease - none -
fig|6666666.230106.peg.3438 CDS DS362248.1 405084 404482 -3 - 603 Membrane-associated phospholipid phosphatase - none -
fig|6666666.230106.peg.3439 CDS DS362248.1 405229 406092 1 + 864 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.3440 CDS DS362248.1 406255 406953 1 + 699 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.230106.peg.3441 CDS DS362248.1 406990 408936 1 + 1947 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.230106.peg.3442 CDS DS362248.1 408970 409725 1 + 756 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.230106.peg.3443 CDS DS362248.1 410571 409864 -3 - 708 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.3444 CDS DS362248.1 410530 410772 1 + 243 hypothetical protein - none -
fig|6666666.230106.peg.3445 CDS DS362248.1 411844 410876 -1 - 969 FIG00405468: hypothetical protein - none -
fig|6666666.230106.peg.3446 CDS DS362248.1 412846 411890 -1 - 957 FIG00406595: hypothetical protein - none -
fig|6666666.230106.peg.3447 CDS DS362248.1 413292 412870 -3 - 423 FIG00403496: hypothetical protein - none -
fig|6666666.230106.peg.3448 CDS DS362248.1 413922 414725 3 + 804 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.230106.peg.3449 CDS DS362248.1 415776 414745 -3 - 1032 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.230106.peg.3450 CDS DS362248.1 416291 415875 -2 - 417 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.230106.peg.3451 CDS DS362248.1 417639 416323 -3 - 1317 Collagenase precursor (EC 3.4.-.-) - none -
fig|6666666.230106.peg.3452 CDS DS362248.1 417685 418665 1 + 981 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.230106.peg.3453 CDS DS362248.1 418860 419150 3 + 291 hypothetical protein - none -
fig|6666666.230106.peg.3454 CDS DS362248.1 420112 419147 -1 - 966 FIG00403590: hypothetical protein - none -
fig|6666666.230106.peg.3455 CDS DS362248.1 421110 420103 -3 - 1008 NAD-dependent epimerase/dehydratase family protein - none -
fig|6666666.230106.peg.3456 CDS DS362248.1 422194 421172 -1 - 1023 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.230106.peg.3457 CDS DS362248.1 422337 424481 3 + 2145 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.230106.peg.3458 CDS DS362248.1 424647 425123 3 + 477 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230106.peg.3459 CDS DS362248.1 426134 425187 -2 - 948 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.230106.peg.3460 CDS DS362248.1 426354 427253 3 + 900 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.230106.peg.3461 CDS DS362248.1 427393 428892 1 + 1500 Methyltransferase (EC 2.1.1.-) - none -
fig|6666666.230106.peg.3462 CDS DS362248.1 428901 431138 3 + 2238 Dipeptidyl peptidase IV - none -
fig|6666666.230106.peg.3463 CDS DS362248.1 431313 432587 3 + 1275 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.230106.peg.3464 CDS DS362248.1 432588 433583 3 + 996 FIG00936973: hypothetical protein - none -
fig|6666666.230106.peg.3465 CDS DS362248.1 433568 434047 2 + 480 probable integral membrane protein Cj0341c - none -
fig|6666666.230106.peg.3466 CDS DS362248.1 434210 434890 2 + 681 putative peptidase - none -
fig|6666666.230106.peg.3467 CDS DS362248.1 434968 435870 1 + 903 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.230106.peg.3468 CDS DS362248.1 435905 436714 2 + 810 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.230106.peg.3469 CDS DS362248.1 438692 436797 -2 - 1896 FIG00402961: hypothetical protein - none -
fig|6666666.230106.peg.3470 CDS DS362248.1 441204 438676 -3 - 2529 FIG00412616: hypothetical protein - none -
fig|6666666.230106.peg.3471 CDS DS362248.1 442454 441210 -2 - 1245 N-acylglucosamine 2-epimerase (EC 5.1.3.8) Sialic Acid Metabolism
fig|6666666.230106.peg.3472 CDS DS362248.1 444336 442657 -3 - 1680 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.3473 CDS DS362248.1 447534 444361 -3 - 3174 Regulatory sensor-transducer, BlaR1/MecR1 family / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.3474 CDS DS362248.1 450121 447746 -1 - 2376 Alpha-xylosidase (EC 3.2.1.-) Xylose utilization
fig|6666666.230106.peg.3475 CDS DS362248.1 450378 454289 3 + 3912 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.3476 CDS DS362248.1 456025 454295 -1 - 1731 cellulase - none -
fig|6666666.230106.peg.3477 CDS DS362248.1 457967 456066 -2 - 1902 FIG00416521: hypothetical protein - none -
fig|6666666.230106.peg.3478 CDS DS362248.1 459217 457964 -1 - 1254 N-acylglucosamine 2-epimerase (EC 5.1.3.8) Sialic Acid Metabolism
fig|6666666.230106.peg.3479 CDS DS362248.1 459432 459551 3 + 120 hypothetical protein - none -
fig|6666666.230106.peg.3480 CDS DS362248.1 459557 462091 2 + 2535 FIG00412616: hypothetical protein - none -
fig|6666666.230106.peg.3481 CDS DS362248.1 463666 462245 -1 - 1422 sialic acid-specific 9-O-acetylesterase - none -
fig|6666666.230106.peg.3482 CDS DS362248.1 463860 464987 3 + 1128 hypothetical protein - none -
fig|6666666.230106.peg.3483 CDS DS362248.1 465775 465653 -1 - 123 hypothetical protein - none -
fig|6666666.230106.peg.3484 CDS DS362248.1 466705 465779 -1 - 927 ATPase - none -
fig|6666666.230106.peg.3485 CDS DS362248.1 467125 470469 1 + 3345 membrane protein, putative - none -
fig|6666666.230106.peg.3486 CDS DS362248.1 470664 471260 3 + 597 Polysaccharide deacetylase - none -
fig|6666666.230106.peg.3487 CDS DS362248.1 471432 471295 -3 - 138 hypothetical protein - none -
fig|6666666.230106.peg.3488 CDS DS362248.1 472300 471404 -1 - 897 FIG00414726: hypothetical protein - none -
fig|6666666.230106.peg.3489 CDS DS362248.1 472712 474511 2 + 1800 sensor histidine kinase - none -
fig|6666666.230106.peg.3490 CDS DS362248.1 474508 475140 1 + 633 DNA-binding response regulator, LuxR family - none -
fig|6666666.230106.peg.3491 CDS DS362248.1 476451 475219 -3 - 1233 FIG00405395: hypothetical protein - none -
fig|6666666.230106.peg.3492 CDS DS362248.1 476477 476623 2 + 147 hypothetical protein - none -
fig|6666666.230106.peg.3493 CDS DS362248.1 477429 476626 -3 - 804 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230106.peg.3494 CDS DS362248.1 477620 477468 -2 - 153 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230106.peg.3495 CDS DS362248.1 479361 478069 -3 - 1293 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.230106.peg.3496 CDS DS362248.1 479927 479469 -2 - 459 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.230106.peg.3497 CDS DS362248.1 480352 480131 -1 - 222 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.230106.peg.3498 CDS DS362248.1 480765 480349 -3 - 417 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.230106.peg.3499 CDS DS362248.1 481703 480951 -2 - 753 uroporphyrinogen-III synthase HemD, putative - none -
fig|6666666.230106.peg.3500 CDS DS362248.1 482439 481708 -3 - 732 FIG00938392: hypothetical protein - none -
fig|6666666.230106.peg.3501 CDS DS362248.1 483056 482436 -2 - 621 Lysine decarboxylase family - none -
fig|6666666.230106.peg.3502 CDS DS362248.1 484144 483323 -1 - 822 Mobile element protein - none -
fig|6666666.230106.peg.3503 CDS DS362248.1 485245 484613 -1 - 633 Mobile element protein - none -
fig|6666666.230106.peg.3504 CDS DS362248.1 485961 485332 -3 - 630 Mobile element protein - none -
fig|6666666.230106.peg.3505 CDS DS362248.1 486383 486117 -2 - 267 hypothetical protein - none -
fig|6666666.230106.peg.3506 CDS DS362248.1 487288 486386 -1 - 903 Mobile element protein - none -
fig|6666666.230106.peg.3507 CDS DS362249.1 1985 1857 -2 - 129 hypothetical protein - none -
fig|6666666.230106.peg.3508 CDS DS362249.1 2827 2354 -1 - 474 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230106.peg.3509 CDS DS362249.1 3672 3160 -3 - 513 FIG00417660: hypothetical protein - none -
fig|6666666.230106.peg.3510 CDS DS362249.1 5302 3926 -1 - 1377 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.230106.peg.3511 CDS DS362249.1 5930 5295 -2 - 636 hypothetical protein - none -
fig|6666666.230106.peg.3512 CDS DS362249.1 6441 6139 -3 - 303 hypothetical protein - none -
fig|6666666.230106.peg.3513 CDS DS362249.1 7199 6762 -2 - 438 hypothetical protein - none -
fig|6666666.230106.peg.3514 CDS DS362249.1 7353 7240 -3 - 114 hypothetical protein - none -
fig|6666666.230106.peg.3515 CDS DS362249.1 7751 9757 2 + 2007 FIG00415354: hypothetical protein - none -
fig|6666666.230106.peg.3516 CDS DS362249.1 9903 10382 3 + 480 hypothetical protein - none -
fig|6666666.230106.peg.3517 CDS DS362249.1 10379 12610 2 + 2232 Biotin synthase (EC 2.8.1.6) / Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin biosynthesis Experimental
fig|6666666.230106.peg.3518 CDS DS362249.1 12734 13924 2 + 1191 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.230106.peg.3519 CDS DS362249.1 13973 14620 2 + 648 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.230106.peg.3520 CDS DS362249.1 14605 15381 1 + 777 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.230106.peg.3521 CDS DS362249.1 15381 16028 3 + 648 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.230106.peg.3522 CDS DS362249.1 16058 17230 2 + 1173 Glycosyl transferase, family 2 - none -
fig|6666666.230106.peg.3523 CDS DS362249.1 18480 17236 -3 - 1245 ABC transporter, permease protein - none -
fig|6666666.230106.peg.3524 CDS DS362249.1 19696 18491 -1 - 1206 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230106.peg.3525 CDS DS362249.1 19959 21194 3 + 1236 FIG00413399: hypothetical protein - none -
fig|6666666.230106.peg.3526 CDS DS362249.1 23798 21195 -2 - 2604 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.3527 CDS DS362249.1 25139 23892 -2 - 1248 ABC transporter permease - none -
fig|6666666.230106.peg.3528 CDS DS362249.1 26408 25176 -2 - 1233 Macrolide-specific ABC-type efflux carrier (TC 3.A.1.122.1) - none -
fig|6666666.230106.peg.3529 CDS DS362249.1 27662 26415 -2 - 1248 ABC transporter permease - none -
fig|6666666.230106.peg.3530 CDS DS362249.1 28983 27685 -3 - 1299 Macrolide-specific ABC-type efflux carrier (TC 3.A.1.122.1) - none -
fig|6666666.230106.peg.3531 CDS DS362249.1 29659 29036 -1 - 624 FIG00402683: hypothetical protein - none -
fig|6666666.230106.peg.3532 CDS DS362249.1 30933 29701 -3 - 1233 ABC transporter permease - none -
fig|6666666.230106.peg.3533 CDS DS362249.1 32250 30976 -3 - 1275 Macrolide-specific ABC-type efflux carrier (TC 3.A.1.122.1) - none -
fig|6666666.230106.peg.3534 CDS DS362249.1 32970 32305 -3 - 666 ABC transporter ATP-binding protein - none -
fig|6666666.230106.peg.3535 CDS DS362249.1 34425 33130 -3 - 1296 ABC transporter permease - none -
fig|6666666.230106.peg.3536 CDS DS362249.1 35761 34442 -1 - 1320 Macrolide-specific ABC-type efflux carrier (TC 3.A.1.122.1) - none -
fig|6666666.230106.peg.3537 CDS DS362249.1 37005 35758 -3 - 1248 ABC transporter permease - none -
fig|6666666.230106.peg.3538 CDS DS362249.1 38072 37149 -2 - 924 Hemagglutinin - none -
fig|6666666.230106.peg.3539 CDS DS362249.1 38174 38656 2 + 483 Cytidine deaminase (EC 3.5.4.5) Murein hydrolase regulation and cell death;
tRNA modification Bacteria
fig|6666666.230106.peg.3540 CDS DS362249.1 39014 40648 2 + 1635 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230106.peg.3541 CDS DS362249.1 40754 41293 2 + 540 iron-sulfur flavoprotein - none -
fig|6666666.230106.peg.3542 CDS DS362249.1 41326 42822 1 + 1497 Ferredoxin-type protein NapG (periplasmic nitrate reductase) Nitrate and nitrite ammonification
fig|6666666.230106.peg.3543 CDS DS362249.1 42871 44274 1 + 1404 Fe-S oxidoreductase - none -
fig|6666666.230106.peg.3544 CDS DS362249.1 44427 46298 3 + 1872 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.230106.peg.3545 CDS DS362249.1 46313 46822 2 + 510 hypothetical protein - none -
fig|6666666.230106.peg.3546 CDS DS362249.1 48335 46848 -2 - 1488 FIG00416115: hypothetical protein - none -
fig|6666666.230106.peg.3547 CDS DS362249.1 49875 48322 -3 - 1554 MoxR-like ATPase - none -
fig|6666666.230106.peg.3548 CDS DS362249.1 50404 51042 1 + 639 putative DNA-binding protein - none -
fig|6666666.230106.peg.3549 CDS DS362249.1 51148 51954 1 + 807 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.230106.peg.3550 CDS DS362249.1 53987 52245 -2 - 1743 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.230106.peg.3551 CDS DS362249.1 55712 54069 -2 - 1644 Probable dipeptidase (EC 3.4.-.-) - none -
fig|6666666.230106.peg.3552 CDS DS362249.1 57416 55749 -2 - 1668 FIG00407700: hypothetical protein - none -
fig|6666666.230106.peg.3553 CDS DS362249.1 57615 58721 3 + 1107 Alanine dehydrogenase (EC 1.4.1.1) Pyruvate Alanine Serine Interconversions
fig|6666666.230106.peg.3554 CDS DS362249.1 60028 58805 -1 - 1224 Permeases of the major facilitator superfamily - none -
fig|6666666.230106.peg.3555 CDS DS362249.1 60231 61667 3 + 1437 Glutamate decarboxylase (EC 4.1.1.15) - none -
fig|6666666.230106.peg.3556 CDS DS362249.1 61790 62755 2 + 966 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.3557 CDS DS362249.1 62853 63608 3 + 756 Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family Potassium homeostasis
fig|6666666.230106.peg.3558 CDS DS362249.1 63712 65298 1 + 1587 Glutamate/gamma-aminobutyrate antiporter - none -
fig|6666666.230106.peg.3559 CDS DS362249.1 66343 65393 -1 - 951 Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.230106.peg.3560 CDS DS362249.1 67084 66422 -1 - 663 FIG00402915: hypothetical protein - none -
fig|6666666.230106.peg.3561 CDS DS362249.1 67690 67133 -1 - 558 FIG00405189: hypothetical protein - none -
fig|6666666.230106.peg.3562 CDS DS362249.1 68810 67710 -2 - 1101 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.3563 CDS DS362249.1 69405 68797 -3 - 609 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.3564 CDS DS362249.1 70160 69456 -2 - 705 FIG00414056: hypothetical protein - none -
fig|6666666.230106.peg.3565 CDS DS362249.1 70877 70167 -2 - 711 FIG00405854: hypothetical protein - none -
fig|6666666.230106.peg.3566 CDS DS362249.1 71956 71108 -1 - 849 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.230106.peg.3567 CDS DS362249.1 72341 71949 -2 - 393 FIG00404066: hypothetical protein - none -
fig|6666666.230106.peg.3568 CDS DS362249.1 72436 72909 1 + 474 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.230106.peg.3569 CDS DS362249.1 75825 72916 -3 - 2910 L-fucose kinase (EC 2.7.1.52) - none -
fig|6666666.230106.peg.3570 CDS DS362249.1 76572 75985 -3 - 588 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230106.peg.3571 CDS DS362249.1 77792 76572 -2 - 1221 Aminotransferase - none -
fig|6666666.230106.peg.3572 CDS DS362249.1 80723 77823 -2 - 2901 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.230106.peg.3573 CDS DS362249.1 81624 80749 -3 - 876 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230106.peg.3574 CDS DS362249.1 83042 81816 -2 - 1227 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230106.peg.3575 CDS DS362249.1 84256 83039 -1 - 1218 putative glycosyl transferase - none -
fig|6666666.230106.peg.3576 CDS DS362249.1 85353 84280 -3 - 1074 FIG00512786: hypothetical protein - none -
fig|6666666.230106.peg.3577 CDS DS362249.1 86807 85350 -2 - 1458 Putative uncharacterized protein in cluster with two glycosyl transferases - none -
fig|6666666.230106.peg.3578 CDS DS362249.1 87942 86812 -3 - 1131 Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids - none -
fig|6666666.230106.peg.3579 CDS DS362249.1 89441 88074 -2 - 1368 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.3580 CDS DS362249.1 89731 89480 -1 - 252 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230106.peg.3581 CDS DS362249.1 90993 89761 -3 - 1233 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230106.peg.3582 CDS DS362249.1 91948 91466 -1 - 483 hypothetical protein - none -
fig|6666666.230106.peg.3583 CDS DS362249.1 92514 91945 -3 - 570 conserved hypothetical protein - none -
fig|6666666.230106.peg.3584 CDS DS362249.1 93884 92595 -2 - 1290 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.230106.peg.3585 CDS DS362249.1 94501 93929 -1 - 573 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230106.peg.3586 CDS DS362249.1 95640 94510 -3 - 1131 Pleiotropic regulatory protein - none -
fig|6666666.230106.peg.3587 CDS DS362249.1 96630 95665 -3 - 966 UDP-2-acetamido-2-deoxy-D-glucuronic acid dehydrogenase (NAD+ cofactor) - none -
fig|6666666.230106.peg.3588 CDS DS362249.1 97160 96675 -2 - 486 UpdZ protein - none -
fig|6666666.230106.peg.3589 CDS DS362249.1 97837 97235 -1 - 603 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230106.peg.3590 CDS DS362249.1 98723 98367 -2 - 357 Transcriptional regulator, MarR family - none -
fig|6666666.230106.peg.3591 CDS DS362249.1 101320 98735 -1 - 2586 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.230106.peg.3592 CDS DS362249.1 102602 101388 -2 - 1215 Clostripain-related protein - none -
fig|6666666.230106.peg.3593 CDS DS362249.1 103011 102613 -3 - 399 FIG00405061: hypothetical protein - none -
fig|6666666.230106.peg.3594 CDS DS362249.1 103992 103132 -3 - 861 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.230106.peg.3595 CDS DS362249.1 105714 104185 -3 - 1530 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.230106.peg.3596 CDS DS362249.1 107360 106062 -2 - 1299 Transglutaminase-like enzymes, putative cysteine proteases - none -
fig|6666666.230106.peg.3597 CDS DS362249.1 108565 107393 -1 - 1173 L-alanine-DL-glutamate epimerase Muconate lactonizing enzyme family;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230106.peg.3598 CDS DS362249.1 109902 108697 -3 - 1206 L-alanyl-gamma-D-glutamyl-L-diamino acid endopeptidase Muconate lactonizing enzyme family
fig|6666666.230106.peg.3599 CDS DS362249.1 110547 111866 3 + 1320 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.230106.peg.3600 CDS DS362249.1 112698 112096 -3 - 603 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.230106.peg.3601 CDS DS362249.1 113746 113051 -1 - 696 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.230106.peg.3602 CDS DS362249.1 114562 113807 -1 - 756 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.230106.peg.3603 CDS DS362249.1 115440 114580 -3 - 861 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.230106.peg.3604 CDS DS362249.1 116637 115453 -3 - 1185 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.230106.peg.3605 CDS DS362249.1 116829 117647 3 + 819 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.230106.peg.3606 CDS DS362249.1 117722 119461 2 + 1740 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.230106.peg.3607 CDS DS362249.1 119466 120878 3 + 1413 TPR-domain containing protein - none -
fig|6666666.230106.peg.3608 CDS DS362249.1 120907 121545 1 + 639 Alkaline phosphatase like protein Phosphate metabolism
fig|6666666.230106.peg.3609 CDS DS362249.1 122136 121636 -3 - 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.230106.peg.3610 CDS DS362249.1 122263 122862 1 + 600 FIG00407667: hypothetical protein - none -
fig|6666666.230106.peg.3611 CDS DS362249.1 123519 122926 -3 - 594 Site-specific recombinase Mpi - none -
fig|6666666.230106.peg.3612 CDS DS362249.1 124990 123749 -1 - 1242 Lipopolysaccharide biosynthesis protein RffA - none -
fig|6666666.230106.peg.3613 CDS DS362249.1 125778 125134 -3 - 645 Acetyltransferase (isoleucine patch superfamily) - none -
fig|6666666.230106.peg.3614 CDS DS362249.1 126392 125784 -2 - 609 Lipid carrier : UDP-N-acetylgalactosaminyltransferase (EC 2.4.1.-) N-linked Glycosylation in Bacteria
fig|6666666.230106.peg.3615 CDS DS362249.1 127599 126397 -3 - 1203 Putative glycosyltransferase - none -
fig|6666666.230106.peg.3616 CDS DS362249.1 128792 127608 -2 - 1185 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230106.peg.3617 CDS DS362249.1 129954 128818 -3 - 1137 Capsular polysaccharide synthesis enzyme Cap5F - none -
fig|6666666.230106.peg.3618 CDS DS362249.1 131085 130012 -3 - 1074 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) N-linked Glycosylation in Bacteria
fig|6666666.230106.peg.3619 CDS DS362249.1 132117 131092 -3 - 1026 Alpha-1,4-N-acetylgalactosamine transferase PglJ (EC 2.4.1.-) N-linked Glycosylation in Bacteria
fig|6666666.230106.peg.3620 CDS DS362249.1 133317 132121 -3 - 1197 Glycosyl transferase, group 1 CBSS-258594.1.peg.3339
fig|6666666.230106.peg.3621 CDS DS362249.1 134518 133346 -1 - 1173 hypothetical protein - none -
fig|6666666.230106.peg.3622 CDS DS362249.1 135255 134566 -3 - 690 Carbohydrate Esterase Family 4 - none -
fig|6666666.230106.peg.3623 CDS DS362249.1 136408 135242 -1 - 1167 expressed protein - none -
fig|6666666.230106.peg.3624 CDS DS362249.1 137439 136426 -3 - 1014 Glycosyl transferase family protein - none -
fig|6666666.230106.peg.3625 CDS DS362249.1 138761 137448 -2 - 1314 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.230106.peg.3626 CDS DS362249.1 139733 138795 -2 - 939 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230106.peg.3627 CDS DS362249.1 141240 139723 -3 - 1518 putative flippase - none -
fig|6666666.230106.peg.3628 CDS DS362249.1 141897 141415 -3 - 483 UpdZ protein - none -
fig|6666666.230106.peg.3629 CDS DS362249.1 142476 141943 -3 - 534 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230106.peg.3630 CDS DS362249.1 143535 143356 -3 - 180 hypothetical protein - none -
fig|6666666.230106.peg.3631 CDS DS362249.1 143836 143714 -1 - 123 hypothetical protein - none -
fig|6666666.230106.peg.3632 CDS DS362249.1 143883 144347 3 + 465 FIG00896819: hypothetical protein - none -
fig|6666666.230106.peg.3633 CDS DS362249.1 144427 145092 1 + 666 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism
fig|6666666.230106.peg.3634 CDS DS362249.1 145111 146088 1 + 978 putative dihydropyrimidine dehydrogenase [NADP+] precursor - none -
fig|6666666.230106.peg.3635 CDS DS362249.1 147949 146183 -1 - 1767 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) N-linked Glycosylation in Bacteria
fig|6666666.230106.peg.3636 CDS DS362249.1 149597 148272 -2 - 1326 Predicted ATPase related to phosphate starvation-inducible protein PhoH Phosphate metabolism
fig|6666666.230106.peg.3637 CDS DS362249.1 149811 151019 3 + 1209 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Colicin V and Bacteriocin Production Cluster;
Colicin V and Bacteriocin Production Cluster;
Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.230106.peg.3638 CDS DS362249.1 151361 150987 -2 - 375 Bona fide RidA/YjgF/TdcF/RutC subgroup - none -
fig|6666666.230106.peg.3639 CDS DS362249.1 153290 151587 -2 - 1704 Tetratricopeptide repeat family protein - none -
fig|6666666.230106.peg.3640 CDS DS362249.1 154034 153294 -2 - 741 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.230106.peg.3641 CDS DS362249.1 155733 154063 -3 - 1671 DNA repair protein RecN DNA repair, bacterial
fig|6666666.230106.peg.3642 CDS DS362249.1 156988 155759 -1 - 1230 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.230106.peg.3643 CDS DS362249.1 157753 156989 -1 - 765 DNA Pol III Epsilon Chain - none -
fig|6666666.230106.peg.3644 CDS DS362249.1 159022 157898 -1 - 1125 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.230106.peg.3645 CDS DS362249.1 159210 159578 3 + 369 FIG00937408: hypothetical protein - none -
fig|6666666.230106.peg.3646 CDS DS362249.1 161380 159746 -1 - 1635 FIG00402966: hypothetical protein - none -
fig|6666666.230106.peg.3647 CDS DS362249.1 162220 161453 -1 - 768 Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein Beta-lactamase
fig|6666666.230106.peg.3648 CDS DS362249.1 163277 162291 -2 - 987 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.230106.peg.3649 CDS DS362249.1 164142 163294 -3 - 849 FIG00404031: hypothetical protein - none -
fig|6666666.230106.peg.3650 CDS DS362249.1 164054 164179 2 + 126 hypothetical protein - none -
fig|6666666.230106.peg.3651 CDS DS362249.1 165119 164163 -2 - 957 L-threonine 3-dehydrogenase (EC 1.1.1.103) Glycine Biosynthesis;
Threonine degradation
fig|6666666.230106.peg.3652 CDS DS362249.1 165151 165288 1 + 138 hypothetical protein - none -
fig|6666666.230106.peg.3653 CDS DS362249.1 165273 166460 3 + 1188 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) Glycine Biosynthesis;
Glycine and Serine Utilization
fig|6666666.230106.peg.3654 CDS DS362249.1 167140 166658 -1 - 483 Ferritin-like protein 2 Iron-sulfur cluster assembly
fig|6666666.230106.peg.3655 CDS DS362249.1 168443 167283 -2 - 1161 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230106.peg.3656 CDS DS362249.1 169916 168597 -2 - 1320 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.230106.peg.3657 CDS DS362249.1 170747 170040 -2 - 708 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.230106.peg.3658 CDS DS362249.1 171376 170771 -1 - 606 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.230106.peg.3659 CDS DS362249.1 172253 171498 -2 - 756 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.230106.peg.3660 CDS DS362249.1 173025 172303 -3 - 723 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis
fig|6666666.230106.peg.3661 CDS DS362249.1 173636 173046 -2 - 591 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.230106.peg.3662 CDS DS362249.1 174583 173726 -1 - 858 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.230106.peg.3663 CDS DS362249.1 176032 175250 -1 - 783 Mobile element protein - none -
fig|6666666.230106.peg.3664 CDS DS362249.1 177599 176019 -2 - 1581 Mobile element protein - none -
fig|6666666.230106.peg.3665 CDS DS362249.1 178321 177716 -1 - 606 hypothetical protein - none -
fig|6666666.230106.peg.3666 CDS DS362249.1 179163 178318 -3 - 846 Transcriptional regulator - none -
fig|6666666.230106.peg.3667 CDS DS362249.1 180279 180139 -3 - 141 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.230106.peg.3668 CDS DS362249.1 180489 180325 -3 - 165 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.230106.peg.3669 CDS DS362249.1 181201 180908 -1 - 294 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230106.peg.3670 CDS DS362249.1 182028 181246 -3 - 783 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.230106.peg.3671 CDS DS362249.1 182972 182073 -2 - 900 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.3672 CDS DS362249.1 184388 183129 -2 - 1260 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.230106.peg.3673 CDS DS362249.1 185410 184436 -1 - 975 MoxR-like ATPases - none -
fig|6666666.230106.peg.3674 CDS DS362249.1 186645 185422 -3 - 1224 FIG00652157: hypothetical protein - none -
fig|6666666.230106.peg.3675 CDS DS362249.1 187256 186642 -2 - 615 FIG00404596: hypothetical protein - none -
fig|6666666.230106.peg.3676 CDS DS362249.1 188087 187266 -2 - 822 FIG00403491: hypothetical protein - none -
fig|6666666.230106.peg.3677 CDS DS362249.1 189154 188150 -1 - 1005 FIG00649403: hypothetical protein - none -
fig|6666666.230106.peg.3678 CDS DS362249.1 189255 189980 3 + 726 FIG00652438: hypothetical protein - none -
fig|6666666.230106.peg.3679 CDS DS362249.1 190106 190681 2 + 576 FIG00417994: hypothetical protein - none -
fig|6666666.230106.peg.3680 CDS DS362249.1 191694 190861 -3 - 834 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.230106.peg.3681 CDS DS362249.1 192832 191774 -1 - 1059 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.230106.peg.3682 CDS DS362249.1 193052 193852 2 + 801 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.230106.peg.3683 CDS DS362249.1 195531 193870 -3 - 1662 Hydroxylamine reductase (EC 1.7.-.-) Nitrosative stress
fig|6666666.230106.peg.3684 CDS DS362249.1 195703 196341 1 + 639 Hcp transcriptional regulator HcpR (Crp/Fnr family) Nitrosative stress
fig|6666666.230106.peg.3685 CDS DS362249.1 196394 197083 2 + 690 Hcp transcriptional regulator HcpR (Crp/Fnr family) Nitrosative stress
fig|6666666.230106.peg.3686 CDS DS362249.1 198365 197085 -2 - 1281 FIG00897187: hypothetical protein - none -
fig|6666666.230106.peg.3687 CDS DS362249.1 199164 198373 -3 - 792 Cytochrome c biogenesis protein CcsA - none -
fig|6666666.230106.peg.3688 CDS DS362249.1 200405 199161 -2 - 1245 FIG00896358: hypothetical protein - none -
fig|6666666.230106.peg.3689 CDS DS362249.1 201918 200437 -3 - 1482 Cytochrome c552 precursor (EC 1.7.2.2) Nitrate and nitrite ammonification;
Soluble cytochromes and functionally related electron carriers
fig|6666666.230106.peg.3690 CDS DS362249.1 202530 201940 -3 - 591 Cytochrome c nitrite reductase, small subunit NrfH Nitrate and nitrite ammonification
fig|6666666.230106.peg.3691 CDS DS362249.1 203921 202728 -2 - 1194 conserved hypothetical protein, putative iron uptake factor - none -
fig|6666666.230106.peg.3692 CDS DS362249.1 205332 203929 -3 - 1404 FIG00897421: hypothetical protein - none -
fig|6666666.230106.peg.3693 CDS DS362249.1 207682 205376 -1 - 2307 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.230106.peg.3694 CDS DS362249.1 207701 207850 2 + 150 hypothetical protein - none -
fig|6666666.230106.peg.3695 CDS DS362249.1 207828 207947 3 + 120 hypothetical protein - none -
fig|6666666.230106.peg.3696 CDS DS362249.1 208047 209327 3 + 1281 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.230106.peg.3697 CDS DS362249.1 210138 209683 -3 - 456 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.230106.peg.3698 CDS DS362249.1 210826 210170 -1 - 657 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230106.peg.3699 CDS DS362249.1 211619 210939 -2 - 681 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.230106.peg.3700 CDS DS362249.1 212242 215475 1 + 3234 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230106.peg.3701 CDS DS362249.1 215491 217281 1 + 1791 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.3702 CDS DS362249.1 217620 218243 3 + 624 FIG00414000: hypothetical protein - none -
fig|6666666.230106.peg.3703 CDS DS362249.1 218256 219383 3 + 1128 Chitinase (EC 3.2.1.14) - none -
fig|6666666.230106.peg.3704 CDS DS362249.1 219560 220840 2 + 1281 FIG00404901: hypothetical protein - none -
fig|6666666.230106.peg.3705 CDS DS362249.1 222141 220921 -3 - 1221 putative outer membrane protein precursor - none -
fig|6666666.230106.peg.3706 CDS DS362249.1 222482 223483 2 + 1002 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.230106.peg.3707 CDS DS362249.1 223583 224287 2 + 705 Pirin - none -
fig|6666666.230106.peg.3708 CDS DS362249.1 224370 225104 3 + 735 Metal dependent hydrolase (EC 3.-.-.-) - none -
fig|6666666.230106.peg.3709 CDS DS362249.1 225144 226289 3 + 1146 FIG00407312: hypothetical protein - none -
fig|6666666.230106.peg.3710 CDS DS362249.1 226339 226716 1 + 378 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.230106.peg.3711 CDS DS362249.1 226746 226931 3 + 186 FIG00404257: hypothetical protein - none -
fig|6666666.230106.peg.3712 CDS DS362249.1 226928 227665 2 + 738 putative methyltransferase - none -
fig|6666666.230106.peg.3713 CDS DS362249.1 228285 227740 -3 - 546 AhpC/TSA family protein - none -
fig|6666666.230106.peg.3714 CDS DS362249.1 231295 228761 -1 - 2535 Ferrous iron transport protein B - none -
fig|6666666.230106.peg.3715 CDS DS362249.1 231579 232847 3 + 1269 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.230106.peg.3716 CDS DS362249.1 233798 232851 -2 - 948 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.230106.peg.3717 CDS DS362249.1 233977 236022 1 + 2046 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.230106.peg.3718 CDS DS362249.1 236177 237622 2 + 1446 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230106.peg.3719 CDS DS362249.1 237816 239138 3 + 1323 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.230106.peg.3720 CDS DS362249.1 239150 240031 2 + 882 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.230106.peg.3721 CDS DS362249.1 240039 241184 3 + 1146 Capsule biosynthesis protein capA - none -
fig|6666666.230106.peg.3722 CDS DS362249.1 241736 241611 -2 - 126 hypothetical protein - none -
fig|6666666.230106.peg.3723 CDS DS362249.1 241809 243503 3 + 1695 Fe-S oxidoreductase - none -
fig|6666666.230106.peg.3724 CDS DS362249.1 245067 243565 -3 - 1503 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.230106.peg.3725 CDS DS362249.1 246210 245209 -3 - 1002 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) - none -
fig|6666666.230106.peg.3726 CDS DS362249.1 246592 248430 1 + 1839 FIG00412263: hypothetical protein - none -
fig|6666666.230106.peg.3727 CDS DS362249.1 249101 248469 -2 - 633 two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.3728 CDS DS362249.1 250018 249143 -1 - 876 Transcriptional regulator, AraC family - none -
fig|6666666.230106.peg.3729 CDS DS362249.1 250711 250421 -1 - 291 hypothetical protein - none -
fig|6666666.230106.peg.3730 CDS DS362249.1 250870 250715 -1 - 156 hypothetical protein - none -
fig|6666666.230106.peg.3731 CDS DS362249.1 250990 250871 -1 - 120 hypothetical protein - none -
fig|6666666.230106.peg.3732 CDS DS362249.1 251241 251014 -3 - 228 hypothetical protein - none -
fig|6666666.230106.peg.3733 CDS DS362249.1 251928 251248 -3 - 681 hypothetical protein - none -
fig|6666666.230106.peg.3734 CDS DS362249.1 252357 252028 -3 - 330 FIG00402663: hypothetical protein - none -
fig|6666666.230106.peg.3735 CDS DS362249.1 253085 252369 -2 - 717 hypothetical protein - none -
fig|6666666.230106.peg.3736 CDS DS362249.1 253262 253086 -2 - 177 FIG00404774: hypothetical protein - none -
fig|6666666.230106.peg.3737 CDS DS362249.1 254248 253268 -1 - 981 hypothetical protein - none -
fig|6666666.230106.peg.3738 CDS DS362249.1 254617 254414 -1 - 204 hypothetical protein - none -
fig|6666666.230106.peg.3739 CDS DS362249.1 255324 254728 -3 - 597 hypothetical protein - none -
fig|6666666.230106.peg.3740 CDS DS362249.1 256848 255553 -3 - 1296 Response regulator of zinc sigma-54-dependent two-component system Zinc resistance
fig|6666666.230106.peg.3741 CDS DS362249.1 259186 256820 -1 - 2367 Two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.3742 CDS DS362249.1 260183 259356 -2 - 828 D-mannonate oxidoreductase (EC 1.1.1.57) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230106.peg.3743 CDS DS362249.1 261402 260215 -3 - 1188 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230106.peg.3744 CDS DS362249.1 263760 261418 -3 - 2343 FIG00408376: hypothetical protein - none -
fig|6666666.230106.peg.3745 CDS DS362249.1 266159 263766 -2 - 2394 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.3746 CDS DS362249.1 267691 266165 -1 - 1527 O-Glycosyl hydrolase family 30 - none -
fig|6666666.230106.peg.3747 CDS DS362249.1 270587 267768 -2 - 2820 Beta-xylosidase (EC 3.2.1.37) Xylose utilization
fig|6666666.230106.peg.3748 CDS DS362249.1 272933 270972 -2 - 1962 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.3749 CDS DS362249.1 276231 272947 -3 - 3285 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.3750 CDS DS362249.1 277313 276516 -2 - 798 hypothetical protein - none -
fig|6666666.230106.peg.3751 CDS DS362249.1 277843 281787 1 + 3945 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.3752 CDS DS362249.1 283377 281962 -3 - 1416 Polygalacturonase (EC 3.2.1.15) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230106.peg.3753 CDS DS362249.1 285734 283398 -2 - 2337 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230106.peg.3754 CDS DS362249.1 287564 285768 -2 - 1797 hypothetical protein - none -
fig|6666666.230106.peg.3755 CDS DS362249.1 289688 288045 -2 - 1644 rhamnogalacturonan acetylesterase - none -
fig|6666666.230106.peg.3756 CDS DS362249.1 292148 290103 -2 - 2046 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.3757 CDS DS362249.1 295451 292161 -2 - 3291 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.3758 CDS DS362249.1 296007 295672 -3 - 336 hypothetical protein - none -
fig|6666666.230106.peg.3759 CDS DS362249.1 298322 296208 -2 - 2115 FIG01093581: hypothetical protein - none -
fig|6666666.230106.peg.3760 CDS DS362249.1 298381 298539 1 + 159 hypothetical protein - none -
fig|6666666.230106.peg.3761 CDS DS362249.1 298566 302636 3 + 4071 DNA-binding response regulator, AraC family - none -
fig|6666666.230106.peg.3762 CDS DS362249.1 303110 304690 2 + 1581 Mobile element protein - none -
fig|6666666.230106.peg.3763 CDS DS362249.1 304677 305459 3 + 783 Mobile element protein - none -
fig|6666666.230106.peg.3764 CDS DS362249.1 305754 306512 3 + 759 hypothetical protein - none -
fig|6666666.230106.peg.3765 CDS DS362249.1 306516 307175 3 + 660 hypothetical protein - none -
fig|6666666.230106.peg.3766 CDS DS362249.1 307894 310122 1 + 2229 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.230106.peg.3767 CDS DS362249.1 310124 310849 2 + 726 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.230106.peg.3768 CDS DS362249.1 313122 310918 -3 - 2205 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.3769 CDS DS362249.1 313413 313153 -3 - 261 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.3770 CDS DS362249.1 315614 313440 -2 - 2175 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.3771 CDS DS362249.1 317116 315791 -1 - 1326 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.3772 CDS DS362249.1 317665 317117 -1 - 549 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.3773 CDS DS362249.1 317846 318550 2 + 705 FIG00406312: hypothetical protein - none -
fig|6666666.230106.peg.3774 CDS DS362249.1 321160 318638 -1 - 2523 Beta-mannosidase (EC 3.2.1.25) Mannose Metabolism
fig|6666666.230106.peg.3775 CDS DS362249.1 322794 321838 -3 - 957 ABC-type transport, permease protein - none -
fig|6666666.230106.peg.3776 CDS DS362249.1 323530 322787 -1 - 744 ABC-type multidrug transport system, ATPase component - none -
fig|6666666.230106.peg.3777 CDS DS362249.1 324678 323533 -3 - 1146 S-layer domain - none -
fig|6666666.230106.peg.3778 CDS DS362249.1 324867 325922 3 + 1056 FIG00413549: hypothetical protein - none -
fig|6666666.230106.peg.3779 CDS DS362249.1 327005 325929 -2 - 1077 Dienelactone hydrolase and related enzymes - none -
fig|6666666.230106.peg.3780 CDS DS362249.1 327571 327035 -1 - 537 Flavodoxin Flavodoxin
fig|6666666.230106.peg.3781 CDS DS362249.1 327980 330517 2 + 2538 Recombination inhibitory protein MutS2 DNA repair, bacterial MutL-MutS system
fig|6666666.230106.peg.3782 CDS DS362249.1 330574 331785 1 + 1212 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions;
Pyruvate Alanine Serine Interconversions
fig|6666666.230106.peg.3783 CDS DS362249.1 332383 331889 -1 - 495 FIG00404078: hypothetical protein - none -
fig|6666666.230106.peg.3784 CDS DS362249.1 332869 332429 -1 - 441 putative periplasmic protein - none -
fig|6666666.230106.peg.3785 CDS DS362249.1 334251 332962 -3 - 1290 two-component system sensor histidine kinase - none -
fig|6666666.230106.peg.3786 CDS DS362249.1 334925 334248 -2 - 678 DNA-binding response regulator - none -
fig|6666666.230106.peg.3787 CDS DS362249.1 335523 334975 -3 - 549 FIG00406732: hypothetical protein - none -
fig|6666666.230106.peg.3788 CDS DS362249.1 336036 335584 -3 - 453 FIG00414849: hypothetical protein - none -
fig|6666666.230106.peg.3789 CDS DS362249.1 336397 336170 -1 - 228 FIG00408671: hypothetical protein - none -
fig|6666666.230106.peg.3790 CDS DS362249.1 336419 336532 2 + 114 hypothetical protein - none -
fig|6666666.230106.peg.3791 CDS DS362249.1 337003 336524 -1 - 480 DNA-binding protein, histone-like family - none -
fig|6666666.230106.peg.3792 CDS DS362249.1 337404 337219 -3 - 186 FIG00402717: hypothetical protein - none -
fig|6666666.230106.peg.3793 CDS DS362249.1 338563 337946 -1 - 618 putative DNA-binding protein - none -
fig|6666666.230106.peg.3794 CDS DS362249.1 338585 340369 2 + 1785 FIG00409117: hypothetical protein - none -
fig|6666666.230106.peg.3795 CDS DS362249.1 341107 340421 -1 - 687 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.230106.peg.3796 CDS DS362249.1 342942 341113 -3 - 1830 Potassium uptake protein, integral membrane component, KtrB - none -
fig|6666666.230106.peg.3797 CDS DS362249.1 343076 344443 2 + 1368 Tryptophan synthase beta chain like (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.230106.peg.3798 CDS DS362249.1 346038 344440 -3 - 1599 Voltage-gated chloride channel family protein - none -
fig|6666666.230106.peg.3799 CDS DS362249.1 346263 346111 -3 - 153 FIG00405231: hypothetical protein - none -
fig|6666666.230106.peg.3800 CDS DS362249.1 347951 346407 -2 - 1545 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.3801 CDS DS362249.1 348817 347957 -1 - 861 putative anti-sigma factor - none -
fig|6666666.230106.peg.3802 CDS DS362249.1 349365 348814 -3 - 552 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.3803 CDS DS362249.1 350679 349417 -3 - 1263 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.230106.peg.3804 CDS DS362249.1 351941 350913 -2 - 1029 Vitamin B12 ABC transporter, permease component BtuC Coenzyme B12 biosynthesis
fig|6666666.230106.peg.3805 CDS DS362249.1 353156 352023 -2 - 1134 Vitamin B12 ABC transporter, B12-binding component BtuF Coenzyme B12 biosynthesis
fig|6666666.230106.peg.3806 CDS DS362249.1 354262 353162 -1 - 1101 FIG00897452: hypothetical protein - none -
fig|6666666.230106.peg.3807 CDS DS362249.1 356289 354316 -3 - 1974 Outer membrane vitamin B12 receptor BtuB Coenzyme B12 biosynthesis
fig|6666666.230106.peg.3808 CDS DS362249.1 356792 357922 2 + 1131 Haloacid dehalogenase-like hydrolase - none -
fig|6666666.230106.peg.3809 CDS DS362249.1 358057 358602 1 + 546 ATP-dependent DNA helicase - none -
fig|6666666.230106.peg.3810 CDS DS362249.1 360615 358696 -3 - 1920 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.230106.peg.3811 CDS DS362249.1 361061 362461 2 + 1401 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230106.peg.3812 CDS DS362249.1 362524 363090 1 + 567 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230106.peg.3813 CDS DS362249.1 363963 363172 -3 - 792 FIG00403782: hypothetical protein - none -
fig|6666666.230106.peg.3814 CDS DS362249.1 364159 365352 1 + 1194 Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) Polyamine Metabolism
fig|6666666.230106.peg.3815 CDS DS362249.1 365405 365851 2 + 447 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.230106.peg.3816 CDS DS362249.1 365870 366907 2 + 1038 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.230106.peg.3817 CDS DS362249.1 367686 366976 -3 - 711 FIG00412668: hypothetical protein - none -
fig|6666666.230106.peg.3818 CDS DS362249.1 368217 367693 -3 - 525 FIG00402774: hypothetical protein - none -
fig|6666666.230106.peg.3819 CDS DS362249.1 368713 368198 -1 - 516 putative RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.3820 CDS DS362249.1 369142 368843 -1 - 300 FIG00417241: hypothetical protein - none -
fig|6666666.230106.peg.3821 CDS DS362249.1 369348 369935 3 + 588 FIG00417513: hypothetical protein - none -
fig|6666666.230106.peg.3822 CDS DS362249.1 371223 370237 -3 - 987 Putative membrane protein YeiH - none -
fig|6666666.230106.peg.3823 CDS DS362249.1 372260 371373 -2 - 888 LysR family transcriptional regulator YeiE LysR-family proteins in Escherichia coli
fig|6666666.230106.peg.3824 CDS DS362249.1 372871 372275 -1 - 597 FIG00402765: hypothetical protein - none -
fig|6666666.230106.peg.3825 CDS DS362249.1 373415 376009 2 + 2595 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.230106.peg.3826 CDS DS362249.1 376527 376096 -3 - 432 FIG00937286: hypothetical protein - none -
fig|6666666.230106.peg.3827 CDS DS362249.1 377245 376637 -1 - 609 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.230106.peg.3828 CDS DS362249.1 378251 377235 -2 - 1017 FIG00935560: hypothetical protein - none -
fig|6666666.230106.peg.3829 CDS DS362249.1 378593 378267 -2 - 327 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.230106.peg.3830 CDS DS362249.1 379567 378641 -1 - 927 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.230106.peg.3831 CDS DS362249.1 379787 380194 2 + 408 FIG00897961: hypothetical protein - none -
fig|6666666.230106.peg.3832 CDS DS362249.1 380333 380923 2 + 591 LSU ribosomal protein L25p - none -
fig|6666666.230106.peg.3833 CDS DS362249.1 381185 381748 2 + 564 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Translation termination factors bacterial
fig|6666666.230106.peg.3834 CDS DS362249.1 381745 382164 1 + 420 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.230106.peg.3835 CDS DS362249.1 382180 383166 1 + 987 Oxidoreductase - none -
fig|6666666.230106.peg.3836 CDS DS362249.1 385398 383188 -3 - 2211 POTASSIUM/PROTON ANTIPORTER ROSB Potassium homeostasis
fig|6666666.230106.peg.3837 CDS DS362249.1 386739 385591 -3 - 1149 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis;
Histidine Biosynthesis
fig|6666666.230106.peg.3838 CDS DS362249.1 387963 386923 -3 - 1041 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.230106.peg.3839 CDS DS362249.1 389322 388030 -3 - 1293 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.230106.peg.3840 CDS DS362249.1 390375 389524 -3 - 852 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.230106.peg.3841 CDS DS362249.1 391295 390738 -2 - 558 FIG00404105: hypothetical protein - none -
fig|6666666.230106.peg.3842 CDS DS362249.1 391390 392493 1 + 1104 FIG00417980: hypothetical protein - none -
fig|6666666.230106.peg.3843 CDS DS362249.1 393183 392521 -3 - 663 FIG00403349: hypothetical protein - none -
fig|6666666.230106.peg.3844 CDS DS362249.1 394118 393414 -2 - 705 Chloramphenicol acetyltransferase (EC 2.3.1.28) - none -
fig|6666666.230106.peg.3845 CDS DS362249.1 396169 394136 -1 - 2034 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.230106.peg.3846 CDS DS362249.1 396495 396187 -3 - 309 Dabb - none -
fig|6666666.230106.peg.3847 CDS DS362249.1 396598 397209 1 + 612 Uridine kinase (EC 2.7.1.48) - none -
fig|6666666.230106.peg.3848 CDS DS362249.1 397265 398683 2 + 1419 Transglycosylase - none -
fig|6666666.230106.peg.3849 CDS DS362249.1 401489 398724 -2 - 2766 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Methionine Biosynthesis
fig|6666666.230106.peg.3850 CDS DS362249.1 401943 401491 -3 - 453 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.230106.peg.3851 CDS DS362249.1 402530 401952 -2 - 579 FIG00402761: hypothetical protein - none -
fig|6666666.230106.peg.3852 CDS DS362249.1 403452 402532 -3 - 921 hypothetical protein - none -
fig|6666666.230106.peg.3853 CDS DS362249.1 404651 403497 -2 - 1155 FIG00411469: hypothetical protein - none -
fig|6666666.230106.peg.3854 CDS DS362249.1 405097 404675 -1 - 423 hypothetical protein - none -
fig|6666666.230106.peg.3855 CDS DS362249.1 406924 405239 -1 - 1686 TPR-repeat-containing protein - none -
fig|6666666.230106.peg.3856 CDS DS362249.1 407516 407019 -2 - 498 FIG00939540: hypothetical protein - none -
fig|6666666.230106.peg.3857 CDS DS362249.1 407960 408661 2 + 702 NifU-related domain containing protein - none -
fig|6666666.230106.peg.3858 CDS DS362249.1 408680 409690 2 + 1011 no significant homology. - none -
fig|6666666.230106.peg.3859 CDS DS362249.1 410787 409750 -3 - 1038 Threonine dehydrogenase and related Zn-dependent dehydrogenases Threonine degradation
fig|6666666.230106.peg.3860 CDS DS362249.1 411612 410815 -3 - 798 putative rRNA methylase - none -
fig|6666666.230106.peg.3861 CDS DS362249.1 414351 411664 -3 - 2688 FIG00898139: hypothetical protein - none -
fig|6666666.230106.peg.3862 CDS DS362249.1 414851 414438 -2 - 414 FIG00405916: hypothetical protein - none -
fig|6666666.230106.peg.3863 CDS DS362249.1 416805 414880 -3 - 1926 Probable outer membrane receptor protein - none -
fig|6666666.230106.peg.3864 CDS DS362249.1 416821 416946 1 + 126 hypothetical protein - none -
fig|6666666.230106.peg.3865 CDS DS362249.1 417854 416943 -2 - 912 FIG00410852: hypothetical protein - none -
fig|6666666.230106.peg.3866 CDS DS362249.1 418523 417921 -2 - 603 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.230106.peg.3867 CDS DS362249.1 419313 418579 -3 - 735 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230106.peg.3868 CDS DS362249.1 419400 419540 3 + 141 hypothetical protein - none -
fig|6666666.230106.peg.3869 CDS DS362249.1 421257 419620 -3 - 1638 FIG00413372: hypothetical protein - none -
fig|6666666.230106.peg.3870 CDS DS362249.1 422403 421270 -3 - 1134 FIG00405618: hypothetical protein - none -
fig|6666666.230106.peg.3871 CDS DS362249.1 423579 422416 -3 - 1164 FIG00407786: hypothetical protein - none -
fig|6666666.230106.peg.3872 CDS DS362249.1 426336 423586 -3 - 2751 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.230106.peg.3873 CDS DS362249.1 426958 426326 -1 - 633 FIG00409790: hypothetical protein - none -
fig|6666666.230106.peg.3874 CDS DS362249.1 427625 427251 -2 - 375 FIG00402998: hypothetical protein - none -
fig|6666666.230106.peg.3875 CDS DS362249.1 428766 427663 -3 - 1104 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.230106.peg.3876 CDS DS362249.1 430126 428798 -1 - 1329 conserved hypothetical protein, putative membrane protein - none -
fig|6666666.230106.peg.3877 CDS DS362249.1 431456 430368 -2 - 1089 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37) Phosphoenolpyruvate phosphomutase;
Phosphonate metabolism
fig|6666666.230106.peg.3878 CDS DS362249.1 432287 431493 -2 - 795 Phosphonoacetaldehyde hydrolase (EC 3.11.1.1) Phosphonate metabolism
fig|6666666.230106.peg.3879 CDS DS362249.1 433666 432302 -1 - 1365 FIG00896977: hypothetical protein - none -
fig|6666666.230106.peg.3880 CDS DS362249.1 433763 434317 2 + 555 FIG00897055: hypothetical protein - none -
fig|6666666.230106.peg.3881 CDS DS362249.1 434415 436355 3 + 1941 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.230106.peg.3882 CDS DS362249.1 436361 436795 2 + 435 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress
fig|6666666.230106.peg.3883 CDS DS362249.1 436867 438507 1 + 1641 FIG00409153: hypothetical protein - none -
fig|6666666.230106.peg.3884 CDS DS362249.1 438589 439386 1 + 798 3-demethylubiquinone-9 3-methyltransferase - none -
fig|6666666.230106.peg.3885 CDS DS362249.1 440071 439586 -1 - 486 hypothetical protein - none -
fig|6666666.230106.peg.3886 CDS DS362249.1 441496 444324 1 + 2829 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230106.peg.3887 CDS DS362249.1 444447 445553 3 + 1107 FIG00411245: hypothetical protein - none -
fig|6666666.230106.peg.3888 CDS DS362249.1 445615 446673 1 + 1059 FIG00405120: hypothetical protein - none -
fig|6666666.230106.peg.3889 CDS DS362249.1 446908 446681 -1 - 228 FIG00405150: hypothetical protein - none -
fig|6666666.230106.peg.3890 CDS DS362249.1 448445 447054 -2 - 1392 Putative oxalate:formate antiporter - none -
fig|6666666.230106.peg.3891 CDS DS362249.1 448582 448469 -1 - 114 hypothetical protein - none -
fig|6666666.230106.peg.3892 CDS DS362249.1 448988 448599 -2 - 390 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915;
Murein hydrolase regulation and cell death
fig|6666666.230106.peg.3893 CDS DS362249.1 449766 448993 -3 - 774 FIG00936113: hypothetical protein - none -
fig|6666666.230106.peg.3894 CDS DS362249.1 450223 449771 -1 - 453 FIG00936439: hypothetical protein - none -
fig|6666666.230106.peg.3895 CDS DS362249.1 451532 450282 -2 - 1251 Transcriptional regulator - none -
fig|6666666.230106.peg.3896 CDS DS362249.1 452631 451534 -3 - 1098 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) ECSIG4-SIG7;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230106.peg.3897 CDS DS362249.1 453692 452637 -2 - 1056 FIG00936241: hypothetical protein - none -
fig|6666666.230106.peg.3898 CDS DS362249.1 454815 453763 -3 - 1053 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.230106.peg.3899 CDS DS362249.1 454939 454766 -1 - 174 hypothetical protein - none -
fig|6666666.230106.peg.3900 CDS DS362249.1 457094 454956 -2 - 2139 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Queuosine-Archaeosine Biosynthesis
fig|6666666.230106.peg.3901 CDS DS362249.1 458473 457217 -1 - 1257 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.230106.peg.3902 CDS DS362249.1 459032 458478 -2 - 555 FIG00935793: hypothetical protein - none -
fig|6666666.230106.peg.3903 CDS DS362249.1 460287 459109 -3 - 1179 TPR domain protein - none -
fig|6666666.230106.peg.3904 CDS DS362249.1 461742 460480 -3 - 1263 putative outer membrane protein - none -
fig|6666666.230106.peg.3905 CDS DS362249.1 462460 461729 -1 - 732 Pantothenate kinase type III, CoaX-like (EC 2.7.1.33) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.230106.peg.3906 CDS DS362249.1 462591 462475 -3 - 117 hypothetical protein - none -
fig|6666666.230106.peg.3907 CDS DS362249.1 462966 464186 3 + 1221 FIG00937571: hypothetical protein - none -
fig|6666666.230106.peg.3908 CDS DS362249.1 464186 465754 2 + 1569 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.230106.peg.3909 CDS DS362249.1 465852 469187 3 + 3336 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.230106.peg.3910 CDS DS362249.1 469365 469249 -3 - 117 hypothetical protein - none -
fig|6666666.230106.peg.3911 CDS DS362249.1 469358 470458 2 + 1101 FIG00403450: hypothetical protein - none -
fig|6666666.230106.peg.3912 CDS DS362249.1 470555 470971 2 + 417 FIG00405539: hypothetical protein - none -
fig|6666666.230106.peg.3913 CDS DS362249.1 474080 471078 -2 - 3003 Gluconolactonase (EC 3.1.1.17) Entner-Doudoroff Pathway
fig|6666666.230106.peg.3914 CDS DS362249.1 477124 474110 -1 - 3015 Gluconolactonase (EC 3.1.1.17) Entner-Doudoroff Pathway
fig|6666666.230106.peg.3915 CDS DS362249.1 477912 477196 -3 - 717 FIG00414464: hypothetical protein - none -
fig|6666666.230106.peg.3916 CDS DS362249.1 479929 477938 -1 - 1992 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230106.peg.3917 CDS DS362249.1 483325 479942 -1 - 3384 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230106.peg.3918 CDS DS362249.1 484574 483579 -2 - 996 putative anti-sigma factor - none -
fig|6666666.230106.peg.3919 CDS DS362249.1 484730 485308 2 + 579 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.3920 CDS DS362249.1 485672 486157 2 + 486 FIG00897771: hypothetical protein - none -
fig|6666666.230106.peg.3921 CDS DS362249.1 486154 487083 1 + 930 FIG00897508: hypothetical protein - none -
fig|6666666.230106.peg.3922 CDS DS362249.1 487089 489503 3 + 2415 glycosyl hydrolase, family 9 - none -
fig|6666666.230106.peg.3923 CDS DS362249.1 492055 489581 -1 - 2475 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.230106.peg.3924 CDS DS362249.1 492564 492352 -3 - 213 hypothetical protein - none -
fig|6666666.230106.peg.3925 CDS DS362249.1 492551 493447 2 + 897 FIG00402964: hypothetical protein - none -
fig|6666666.230106.peg.3926 CDS DS362249.1 493480 494283 1 + 804 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.230106.peg.3927 CDS DS362249.1 494872 494342 -1 - 531 FIG00407145: hypothetical protein - none -
fig|6666666.230106.peg.3928 CDS DS362249.1 495206 494841 -2 - 366 FIG00403631: hypothetical protein - none -
fig|6666666.230106.peg.3929 CDS DS362249.1 495808 495254 -1 - 555 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230106.peg.3930 CDS DS362249.1 496699 495863 -1 - 837 Ribonuclease Z (EC 3.1.26.11) tRNA processing
fig|6666666.230106.peg.3931 CDS DS362249.1 497474 496812 -2 - 663 FIG00412997: hypothetical protein - none -
fig|6666666.230106.peg.3932 CDS DS362249.1 499575 497779 -3 - 1797 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.230106.peg.3933 CDS DS362249.1 499772 500593 2 + 822 Probable lipase (EC 3.1.1.1) - none -
fig|6666666.230106.peg.3934 CDS DS362249.1 501427 500597 -1 - 831 Pantothenate kinase type II, eukaryotic (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.230106.peg.3935 CDS DS362249.1 503859 501595 -3 - 2265 FIG00406556: hypothetical protein - none -
fig|6666666.230106.peg.3936 CDS DS362249.1 504333 506522 3 + 2190 Glutamine synthetase type III, GlnN (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.230106.peg.3937 CDS DS362249.1 506815 507516 1 + 702 transcriptional regulator, Crp/Fnr family Oxidative stress
fig|6666666.230106.peg.3938 CDS DS362249.1 508550 507600 -2 - 951 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.230106.peg.3939 CDS DS362249.1 509220 508588 -3 - 633 FIG00938215: hypothetical protein - none -
fig|6666666.230106.peg.3940 CDS DS362249.1 511746 509242 -3 - 2505 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.230106.peg.3941 CDS DS362249.1 512629 512018 -1 - 612 FIG00416553: hypothetical protein - none -
fig|6666666.230106.peg.3942 CDS DS362249.1 513203 512913 -2 - 291 hypothetical protein - none -
fig|6666666.230106.rna.1 RNA DS362220.1 31498 31583 1 + 86 tRNA-Tyr-GTA - none -
fig|6666666.230106.rna.2 RNA DS362220.1 31590 31662 3 + 73 tRNA-Gly-TCC - none -
fig|6666666.230106.rna.3 RNA DS362220.1 272097 272024 -3 - 74 tRNA-Gln-CTG - none -
fig|6666666.230106.rna.4 RNA DS362220.1 309903 309976 3 + 74 tRNA-Pro-GGG tRNAs
fig|6666666.230106.rna.5 RNA DS362223.1 29268 29354 3 + 87 tRNA-Leu-CAA tRNAs
fig|6666666.230106.rna.6 RNA DS362229.1 18609 18536 -3 - 74 tRNA-Asp-GTC - none -
fig|6666666.230106.rna.7 RNA DS362231.1 17632 17556 -1 - 77 tRNA-Met-CAT - none -
fig|6666666.230106.rna.8 RNA DS362231.1 40872 42406 3 + 1535 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.230106.rna.9 RNA DS362234.1 67293 67365 3 + 73 tRNA-Phe-GAA tRNAs
fig|6666666.230106.rna.10 RNA DS362234.1 67381 67453 1 + 73 tRNA-Pro-CGG tRNAs
fig|6666666.230106.rna.11 RNA DS362234.1 84423 84340 -3 - 84 tRNA-Leu-TAA - none -
fig|6666666.230106.rna.12 RNA DS362234.1 84516 84444 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.230106.rna.13 RNA DS362237.1 1087 1013 -1 - 75 tRNA-Pro-TGG - none -
fig|6666666.230106.rna.14 RNA DS362237.1 24137 24209 2 + 73 tRNA-Lys-CTT - none -
fig|6666666.230106.rna.15 RNA DS362238.1 155 82 -2 - 74 tRNA-Ala-TGC - none -
fig|6666666.230106.rna.16 RNA DS362238.1 319 246 -1 - 74 tRNA-Ile-GAT - none -
fig|6666666.230106.rna.17 RNA DS362238.1 1987 453 -1 - 1535 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.230106.rna.18 RNA DS362238.1 67943 67868 -2 - 76 tRNA-Trp-CCA tRNAs
fig|6666666.230106.rna.19 RNA DS362238.1 69306 69235 -3 - 72 tRNA-Thr-GGT - none -
fig|6666666.230106.rna.20 RNA DS362238.1 69406 69321 -1 - 86 tRNA-Tyr-GTA - none -
fig|6666666.230106.rna.21 RNA DS362238.1 69604 69531 -1 - 74 tRNA-Thr-TGT - none -
fig|6666666.230106.rna.22 RNA DS362240.1 1 584 1 + 584 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.230106.rna.23 RNA DS362240.1 708 817 3 + 110 5S RNA - none -
fig|6666666.230106.rna.24 RNA DS362240.1 151070 150994 -2 - 77 tRNA-Ala-GGC tRNAs
fig|6666666.230106.rna.25 RNA DS362240.1 178940 178868 -2 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.230106.rna.26 RNA DS362241.1 164271 164344 3 + 74 tRNA-Thr-TGT - none -
fig|6666666.230106.rna.27 RNA DS362242.1 119524 119437 -1 - 88 tRNA-Ser-GGA tRNAs
fig|6666666.230106.rna.28 RNA DS362242.1 171565 171490 -1 - 76 tRNA-Arg-CCG tRNAs
fig|6666666.230106.rna.29 RNA DS362243.1 1 1347 1 + 1347 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.230106.rna.30 RNA DS362243.1 1471 1580 1 + 110 5S RNA - none -
fig|6666666.230106.rna.31 RNA DS362243.1 211770 211846 3 + 77 tRNA-Arg-ACG tRNAs
fig|6666666.230106.rna.32 RNA DS362243.1 211867 211943 1 + 77 tRNA-Arg-ACG tRNAs
fig|6666666.230106.rna.33 RNA DS362244.1 23734 23659 -1 - 76 tRNA-Thr-CGT - none -
fig|6666666.230106.rna.34 RNA DS362244.1 103923 104012 3 + 90 tRNA-Ser-GCT - none -
fig|6666666.230106.rna.35 RNA DS362244.1 104016 104091 3 + 76 tRNA-Lys-CTT - none -
fig|6666666.230106.rna.36 RNA DS362244.1 104104 104178 1 + 75 tRNA-Glu-CTC - none -
fig|6666666.230106.rna.37 RNA DS362244.1 148749 148677 -3 - 73 tRNA-Lys-TTT - none -
fig|6666666.230106.rna.38 RNA DS362244.1 287476 287551 1 + 76 tRNA-Gly-GCC tRNAs
fig|6666666.230106.rna.39 RNA DS362244.1 287577 287661 3 + 85 tRNA-Leu-CAG tRNAs
fig|6666666.230106.rna.40 RNA DS362244.1 287702 287785 2 + 84 tRNA-Leu-GAG tRNAs
fig|6666666.230106.rna.41 RNA DS362245.1 18050 18125 2 + 76 tRNA-Lys-TTT - none -
fig|6666666.230106.rna.42 RNA DS362245.1 111635 111710 2 + 76 tRNA-Met-CAT - none -
fig|6666666.230106.rna.43 RNA DS362245.1 124407 124298 -3 - 110 5S RNA - none -
fig|6666666.230106.rna.44 RNA DS362245.1 127351 124531 -1 - 2821 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.230106.rna.45 RNA DS362245.1 127546 127473 -1 - 74 tRNA-Ala-TGC - none -
fig|6666666.230106.rna.46 RNA DS362245.1 127710 127637 -3 - 74 tRNA-Ile-GAT - none -
fig|6666666.230106.rna.47 RNA DS362245.1 129378 127844 -3 - 1535 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.230106.rna.48 RNA DS362245.1 135500 135575 2 + 76 tRNA-Phe-GAA tRNAs
fig|6666666.230106.rna.49 RNA DS362246.1 48361 48285 -1 - 77 tRNA-Arg-TCT - none -
fig|6666666.230106.rna.50 RNA DS362246.1 153802 153730 -1 - 73 tRNA-Gly-CCC tRNAs
fig|6666666.230106.rna.51 RNA DS362247.1 1 614 1 + 614 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.230106.rna.52 RNA DS362247.1 738 847 3 + 110 5S RNA - none -
fig|6666666.230106.rna.53 RNA DS362247.1 31916 31990 2 + 75 tRNA-Val-TAC - none -
fig|6666666.230106.rna.54 RNA DS362247.1 32022 32096 3 + 75 tRNA-Val-TAC - none -
fig|6666666.230106.rna.55 RNA DS362248.1 52138 52222 1 + 85 tRNA-Leu-TAG - none -
fig|6666666.230106.rna.56 RNA DS362248.1 127465 127539 1 + 75 tRNA-Glu-TTC - none -
fig|6666666.230106.rna.57 RNA DS362248.1 236211 236287 3 + 77 tRNA-Asn-GTT - none -
fig|6666666.230106.rna.58 RNA DS362248.1 292017 291943 -3 - 75 tRNA-Arg-CCT - none -
fig|6666666.230106.rna.59 RNA DS362248.1 379496 379572 2 + 77 tRNA-Met-CAT - none -
fig|6666666.230106.rna.60 RNA DS362248.1 383176 383247 1 + 72 tRNA-Met-CAT - none -
fig|6666666.230106.rna.61 RNA DS362248.1 477944 477871 -2 - 74 tRNA-Gln-TTG - none -
fig|6666666.230106.rna.62 RNA DS362249.1 1607 73 -2 - 1535 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.230106.rna.63 RNA DS362249.1 174943 175019 1 + 77 tRNA-Asp-GTC - none -
fig|6666666.230106.rna.64 RNA DS362249.1 228477 228403 -3 - 75 tRNA-Cys-GCA tRNAs
fig|6666666.230106.rna.65 RNA DS362249.1 241275 241348 3 + 74 tRNA-His-GTG - none -
fig|6666666.230106.rna.66 RNA DS362249.1 307339 307252 -1 - 88 tRNA-Ser-TGA - none -
fig|6666666.230106.rna.67 RNA DS362249.1 321710 321620 -2 - 91 tRNA-Ser-GGA tRNAs
fig|6666666.230106.rna.68 RNA DS362249.1 327863 327779 -2 - 85 tRNA-Ser-TGA - none -