fig|6666666.230108.peg.1 CDS JH724260.1 895493 892398 -2 - 3096 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.2 CDS JH724260.1 897620 895671 -2 - 1950 Alpha-N-arabinofuranosidase (EC 3.2.1.55) L-Arabinose utilization
fig|6666666.230108.peg.3 CDS JH724260.1 899666 897675 -2 - 1992 Putative glycosyl hydrolase of unknown function (DUF1680) - none -
fig|6666666.230108.peg.4 CDS JH724260.1 902256 899716 -3 - 2541 Alpha-N-arabinofuranosidase (EC 3.2.1.55) L-Arabinose utilization
fig|6666666.230108.peg.5 CDS JH724260.1 904428 902482 -3 - 1947 Beta-xylosidase (EC 3.2.1.37) Xylose utilization
fig|6666666.230108.peg.6 CDS JH724260.1 906399 904459 -3 - 1941 Hypothetical glycoside hydrolase, family 43, similar to arabinosidase L-Arabinose utilization
fig|6666666.230108.peg.7 CDS JH724260.1 907637 906510 -2 - 1128 Rhamnogalacturonides degradation protein RhiN D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230108.peg.8 CDS JH724260.1 908986 907655 -1 - 1332 FIG00410552: hypothetical protein - none -
fig|6666666.230108.peg.9 CDS JH724260.1 910232 908979 -2 - 1254 FIG00939120: hypothetical protein - none -
fig|6666666.230108.peg.10 CDS JH724260.1 910525 910412 -1 - 114 hypothetical protein - none -
fig|6666666.230108.peg.11 CDS JH724260.1 910738 911868 1 + 1131 Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent Heat shock dnaK gene cluster extended
fig|6666666.230108.peg.12 CDS JH724260.1 911889 912434 3 + 546 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.13 CDS JH724260.1 912721 913239 1 + 519 FIG00418205: hypothetical protein - none -
fig|6666666.230108.peg.14 CDS JH724260.1 913293 915971 3 + 2679 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.15 CDS JH724260.1 915996 917117 3 + 1122 FIG00402773: hypothetical protein - none -
fig|6666666.230108.peg.16 CDS JH724260.1 917409 917762 3 + 354 FIG00402715: hypothetical protein - none -
fig|6666666.230108.peg.17 CDS JH724260.1 918653 917901 -2 - 753 Two-component system response regulator - none -
fig|6666666.230108.peg.18 CDS JH724260.1 920708 918786 -2 - 1923 Sensor histidine kinase - none -
fig|6666666.230108.peg.19 CDS JH724260.1 921162 922607 3 + 1446 serine/threonine protein kinase - none -
fig|6666666.230108.peg.20 CDS JH724260.1 922600 923364 1 + 765 hypothetical protein - none -
fig|6666666.230108.peg.21 CDS JH724260.1 923512 924261 1 + 750 FIG00416710: hypothetical protein - none -
fig|6666666.230108.peg.22 CDS JH724260.1 924273 925547 3 + 1275 probable serine/threonine protein kinase, putative( EC:2.7.11.1 ) - none -
fig|6666666.230108.peg.23 CDS JH724260.1 925564 927306 1 + 1743 hypothetical protein - none -
fig|6666666.230108.peg.24 CDS JH724260.1 927315 928373 3 + 1059 Protein serine/threonine phosphatase PrpC, regulation of stationary phase Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.230108.peg.25 CDS JH724260.1 928390 929868 1 + 1479 Serine/threonine protein kinase PrkC, regulator of stationary phase, short form Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.230108.peg.26 CDS JH724260.1 931058 929928 -2 - 1131 putative DNA mismatch repair protein - none -
fig|6666666.230108.peg.27 CDS JH724260.1 931186 932415 1 + 1230 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230108.peg.28 CDS JH724260.1 932445 932924 3 + 480 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions
fig|6666666.230108.peg.29 CDS JH724260.1 934296 932941 -3 - 1356 Sodium:alanine symporter - none -
fig|6666666.230108.peg.30 CDS JH724260.1 935637 934396 -3 - 1242 Phosphomannomutase (EC 5.4.2.8) / Phosphoglucosamine mutase (EC 5.4.2.10) Bacterial checkpoint-control-related cluster;
Mannose Metabolism;
Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.230108.peg.31 CDS JH724260.1 936415 935810 -1 - 606 FIG00409304: hypothetical protein - none -
fig|6666666.230108.peg.32 CDS JH724260.1 937556 936519 -2 - 1038 FIG146085: 3-to-5 oligoribonuclease A, Bacillus type - none -
fig|6666666.230108.peg.33 CDS JH724260.1 939295 937643 -1 - 1653 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.230108.peg.34 CDS JH724260.1 939338 939655 2 + 318 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.35 CDS JH724260.1 940036 939755 -1 - 282 transposase - none -
fig|6666666.230108.peg.36 CDS JH724260.1 940739 940590 -2 - 150 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.230108.peg.37 CDS JH724260.1 941403 940753 -3 - 651 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.230108.peg.38 CDS JH724260.1 942640 941669 -1 - 972 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.230108.peg.39 CDS JH724260.1 942665 942784 2 + 120 hypothetical protein - none -
fig|6666666.230108.peg.40 CDS JH724260.1 944604 942814 -3 - 1791 Chloride channel protein - none -
fig|6666666.230108.peg.41 CDS JH724260.1 945206 944613 -2 - 594 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.230108.peg.42 CDS JH724260.1 945257 945691 2 + 435 4-hydroxybenzoyl-CoA thioesterase (EC 3.1.2.23) - none -
fig|6666666.230108.peg.43 CDS JH724260.1 945759 946931 3 + 1173 Xylose operon regulatory protein - none -
fig|6666666.230108.peg.44 CDS JH724260.1 948381 946933 -3 - 1449 Putative phosphohydrolase, Icc family - none -
fig|6666666.230108.peg.45 CDS JH724260.1 950598 948394 -3 - 2205 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230108.peg.46 CDS JH724260.1 952163 950712 -2 - 1452 FIG00408452: hypothetical protein - none -
fig|6666666.230108.peg.47 CDS JH724260.1 953782 952178 -1 - 1605 Trehalase (EC 3.2.1.28) Trehalose Uptake and Utilization
fig|6666666.230108.peg.48 CDS JH724260.1 954916 953804 -1 - 1113 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.230108.peg.49 CDS JH724260.1 955730 954960 -2 - 771 endonuclease/exonuclease/phosphatase family protein - none -
fig|6666666.230108.peg.50 CDS JH724260.1 958772 955842 -2 - 2931 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230108.peg.51 CDS JH724260.1 960618 958975 -3 - 1644 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.230108.peg.52 CDS JH724260.1 963817 960635 -1 - 3183 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.53 CDS JH724260.1 964827 963991 -3 - 837 Hypothetical sugar kinase, ROK family - none -
fig|6666666.230108.peg.54 CDS JH724260.1 965894 964899 -2 - 996 Phosphatidylinositol-specific phospholipase C (EC 4.6.1.13) Listeria Pathogenicity Island LIPI-1 extended
fig|6666666.230108.peg.55 CDS JH724260.1 966815 966042 -2 - 774 UPF0246 protein YaaA - none -
fig|6666666.230108.peg.56 CDS JH724260.1 967011 968726 3 + 1716 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.230108.peg.57 CDS JH724260.1 968901 970847 3 + 1947 ATP-dependent DNA helicase, RecQ family - none -
fig|6666666.230108.peg.58 CDS JH724260.1 970961 971920 2 + 960 TPR domain protein, putative component of TonB system Ton and Tol transport systems
fig|6666666.230108.peg.59 CDS JH724260.1 971942 972691 2 + 750 Probable secreted protein - none -
fig|6666666.230108.peg.60 CDS JH724260.1 972985 973833 1 + 849 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.230108.peg.61 CDS JH724260.1 973808 974989 2 + 1182 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Threonine and Homoserine Biosynthesis
fig|6666666.230108.peg.62 CDS JH724260.1 975258 976271 3 + 1014 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54) / Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.230108.peg.63 CDS JH724260.1 976289 977062 2 + 774 Prephenate and/or arogenate dehydrogenase (unknown specificity) (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.230108.peg.64 CDS JH724260.1 977555 980659 2 + 3105 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.65 CDS JH724260.1 980763 980626 -3 - 138 hypothetical protein - none -
fig|6666666.230108.peg.66 CDS JH724260.1 980744 982840 2 + 2097 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230108.peg.67 CDS JH724260.1 983450 982863 -2 - 588 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230108.peg.68 CDS JH724260.1 983918 983460 -2 - 459 FIG00898413: hypothetical protein - none -
fig|6666666.230108.peg.69 CDS JH724260.1 984796 984041 -1 - 756 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.230108.peg.70 CDS JH724260.1 986139 984847 -3 - 1293 FIG00694335: hypothetical protein - none -
fig|6666666.230108.peg.71 CDS JH724260.1 986671 986129 -1 - 543 FIG00651728: hypothetical protein - none -
fig|6666666.230108.peg.72 CDS JH724260.1 986642 986830 2 + 189 FIG00411363: hypothetical protein - none -
fig|6666666.230108.peg.73 CDS JH724260.1 987662 986781 -2 - 882 Peptidase, M23/M37 family - none -
fig|6666666.230108.peg.74 CDS JH724260.1 987788 987663 -2 - 126 hypothetical protein - none -
fig|6666666.230108.peg.75 CDS JH724260.1 989983 987920 -1 - 2064 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.230108.peg.76 CDS JH724260.1 990678 990004 -3 - 675 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.230108.peg.77 CDS JH724260.1 991267 990713 -1 - 555 DJ-1/YajL/PfpI superfamily, includes chaperone protein YajL (former ThiJ), parkinsonism-associated protein DJ-1, peptidases PfpI, Hsp31 - none -
fig|6666666.230108.peg.78 CDS JH724260.1 992100 991282 -3 - 819 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.230108.peg.79 CDS JH724260.1 992506 992135 -1 - 372 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.230108.peg.80 CDS JH724260.1 993296 992580 -2 - 717 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.230108.peg.81 CDS JH724260.1 994009 993296 -1 - 714 Pyridoxine 5@1-phosphate synthase (EC 2.6.99.2) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230108.peg.82 CDS JH724260.1 994087 994983 1 + 897 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.230108.peg.83 CDS JH724260.1 995423 996004 2 + 582 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.84 CDS JH724260.1 996022 997062 1 + 1041 putative anti-sigma factor - none -
fig|6666666.230108.peg.85 CDS JH724260.1 997309 1000611 1 + 3303 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.86 CDS JH724260.1 1000755 1002356 3 + 1602 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.87 CDS JH724260.1 1002493 1004373 1 + 1881 FIG00406056: hypothetical protein - none -
fig|6666666.230108.peg.88 CDS JH724260.1 1004421 1006484 3 + 2064 Alpha-galactosidase (EC 3.2.1.22) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization
fig|6666666.230108.peg.89 CDS JH724260.1 1006498 1007790 1 + 1293 FIG00404622: hypothetical protein - none -
fig|6666666.230108.peg.90 CDS JH724260.1 1007805 1009799 3 + 1995 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.91 CDS JH724260.1 1009857 1011635 3 + 1779 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.92 CDS JH724260.1 1011656 1014352 2 + 2697 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.93 CDS JH724260.1 1014362 1015132 2 + 771 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.94 CDS JH724260.1 1015239 1017449 3 + 2211 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.95 CDS JH724260.1 1018067 1017519 -2 - 549 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.96 CDS JH724260.1 1018215 1019240 3 + 1026 putative anti-sigma factor - none -
fig|6666666.230108.peg.97 CDS JH724260.1 1019347 1022586 1 + 3240 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.98 CDS JH724260.1 1022608 1024224 1 + 1617 FIG00898178: hypothetical protein - none -
fig|6666666.230108.peg.99 CDS JH724260.1 1024349 1026901 2 + 2553 Rhamnogalacturonides degradation protein RhiN D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230108.peg.100 CDS JH724260.1 1030240 1026983 -1 - 3258 putative Tricorn-like protease - none -
fig|6666666.230108.peg.101 CDS JH724260.1 1033847 1032906 -2 - 942 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.230108.peg.102 CDS JH724260.1 1034078 1034956 2 + 879 FIG00938717: hypothetical protein - none -
fig|6666666.230108.peg.103 CDS JH724260.1 1035066 1036544 3 + 1479 Type I secretion system, outer membrane component LapE - none -
fig|6666666.230108.peg.104 CDS JH724260.1 1036620 1037579 3 + 960 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.230108.peg.105 CDS JH724260.1 1037604 1038785 3 + 1182 ABC-type multidrug transport system, permease component - none -
fig|6666666.230108.peg.106 CDS JH724260.1 1038785 1040023 2 + 1239 ABC-type multidrug transport system, permease component - none -
fig|6666666.230108.peg.107 CDS JH724260.1 1041290 1040244 -2 - 1047 Platelet-activating factor acetylhydrolase IB gamma subunit (EC 3.1.1.47) - none -
fig|6666666.230108.peg.108 CDS JH724260.1 1041341 1043359 2 + 2019 Thiol:disulfide interchange protein tlpA - none -
fig|6666666.230108.peg.109 CDS JH724260.1 1044967 1043429 -1 - 1539 Oxidoreductase, Gfo/Idh/MocA family - none -
fig|6666666.230108.peg.110 CDS JH724260.1 1045023 1045178 3 + 156 FIG00416158: hypothetical protein - none -
fig|6666666.230108.peg.111 CDS JH724260.1 1045256 1045618 2 + 363 Transcriptional regulator, MecI family - none -
fig|6666666.230108.peg.112 CDS JH724260.1 1045621 1047441 1 + 1821 Regulatory sensor-transducer, BlaR1/MecR1 family / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.113 CDS JH724260.1 1048634 1047534 -2 - 1101 Septum site-determining protein MinD Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
Septum site-determining cluster Min
fig|6666666.230108.peg.114 CDS JH724260.1 1049467 1048709 -1 - 759 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation;
tRNA modification Bacteria
fig|6666666.230108.peg.115 CDS JH724260.1 1050668 1049649 -2 - 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.230108.peg.116 CDS JH724260.1 1050937 1050722 -1 - 216 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.230108.peg.117 CDS JH724260.1 1051348 1050950 -1 - 399 FIG00412189: hypothetical protein - none -
fig|6666666.230108.peg.118 CDS JH724260.1 1052669 1051422 -2 - 1248 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.230108.peg.119 CDS JH724260.1 1054186 1052810 -1 - 1377 Subtilisin-like serine proteases - none -
fig|6666666.230108.peg.120 CDS JH724260.1 1055322 1054183 -3 - 1140 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.230108.peg.121 CDS JH724260.1 1056791 1055658 -2 - 1134 Integral membrane protein - none -
fig|6666666.230108.peg.122 CDS JH724260.1 1059304 1057061 -1 - 2244 Cellulase - none -
fig|6666666.230108.peg.123 CDS JH724260.1 1059582 1060682 3 + 1101 FIG00411696: hypothetical protein - none -
fig|6666666.230108.peg.124 CDS JH724260.1 1060750 1061610 1 + 861 FIG00408272: hypothetical protein - none -
fig|6666666.230108.peg.125 CDS JH724260.1 1062677 1061622 -2 - 1056 Nucleoside-diphosphate-sugar epimerases CBSS-296591.1.peg.2330
fig|6666666.230108.peg.126 CDS JH724260.1 1063717 1062701 -1 - 1017 Putative phosphohydrolase, Icc family - none -
fig|6666666.230108.peg.127 CDS JH724260.1 1064235 1063756 -3 - 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.230108.peg.128 CDS JH724260.1 1065693 1064392 -3 - 1302 FIG00414118: hypothetical protein - none -
fig|6666666.230108.peg.129 CDS JH724260.1 1067410 1065710 -1 - 1701 SusD, outer membrane protein Cellulosome
fig|6666666.230108.peg.130 CDS JH724260.1 1070385 1067428 -3 - 2958 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.131 CDS JH724260.1 1073408 1071819 -2 - 1590 Regulatory protein SusR Cellulosome
fig|6666666.230108.peg.132 CDS JH724260.1 1074210 1073593 -3 - 618 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.230108.peg.133 CDS JH724260.1 1074866 1074210 -2 - 657 Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) Oxidative stress
fig|6666666.230108.peg.134 CDS JH724260.1 1074936 1075364 3 + 429 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.230108.peg.135 CDS JH724260.1 1076464 1075472 -1 - 993 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.230108.peg.136 CDS JH724260.1 1077420 1076587 -3 - 834 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.230108.peg.137 CDS JH724260.1 1077979 1077593 -1 - 387 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.230108.peg.138 CDS JH724260.1 1078447 1077986 -1 - 462 LSU ribosomal protein L13p (L13Ae) - none -
fig|6666666.230108.peg.139 CDS JH724260.1 1079277 1078786 -3 - 492 FIG00402847: hypothetical protein - none -
fig|6666666.230108.peg.140 CDS JH724260.1 1080832 1079429 -1 - 1404 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn
fig|6666666.230108.peg.141 CDS JH724260.1 1082344 1080860 -1 - 1485 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.230108.peg.142 CDS JH724260.1 1083827 1082481 -2 - 1347 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.230108.peg.143 CDS JH724260.1 1084856 1084296 -2 - 561 Maltose O-acetyltransferase (EC 2.3.1.79) Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.144 CDS JH724260.1 1088212 1084985 -1 - 3228 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.230108.peg.145 CDS JH724260.1 1088420 1088304 -2 - 117 hypothetical protein - none -
fig|6666666.230108.peg.146 CDS JH724260.1 1088714 1088586 -2 - 129 hypothetical protein - none -
fig|6666666.230108.peg.147 CDS JH724260.1 1088854 1089498 1 + 645 FIG00416553: hypothetical protein - none -
fig|6666666.230108.peg.148 CDS JH724260.1 1089573 1090667 3 + 1095 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.230108.peg.149 CDS JH724260.1 1091952 1090774 -3 - 1179 Major outer membrane protein OmpA - none -
fig|6666666.230108.peg.150 CDS JH724260.1 1094013 1092097 -3 - 1917 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.230108.peg.151 CDS JH724260.1 1094343 1094053 -3 - 291 FIG00403378: hypothetical protein - none -
fig|6666666.230108.peg.152 CDS JH724260.1 1096069 1094348 -1 - 1722 FIG00937328: hypothetical protein - none -
fig|6666666.230108.peg.153 CDS JH724260.1 1097462 1096095 -2 - 1368 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) ECSIG4-SIG7;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.230108.peg.154 CDS JH724260.1 1098234 1097473 -3 - 762 FIG00898614: hypothetical protein - none -
fig|6666666.230108.peg.155 CDS JH724260.1 1099932 1098379 -3 - 1554 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) ECSIG4-SIG7;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.230108.peg.156 CDS JH724260.1 1101350 1100031 -2 - 1320 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.230108.peg.157 CDS JH724260.1 1103793 1101610 -3 - 2184 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.230108.peg.158 CDS JH724260.1 1105131 1103968 -3 - 1164 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.230108.peg.159 CDS JH724260.1 1105877 1105215 -2 - 663 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.230108.peg.160 CDS JH724260.1 1107364 1106009 -1 - 1356 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.230108.peg.161 CDS JH724260.1 1107839 1108087 2 + 249 RNA binding protein - none -
fig|6666666.230108.peg.162 CDS JH724260.1 1109015 1108170 -2 - 846 Lipopolysaccharide ABC transporter, ATP-binding protein LptB - none -
fig|6666666.230108.peg.163 CDS JH724260.1 1109114 1109836 2 + 723 ABC-type transport system involved in resistance to organic solvents, permease component - none -
fig|6666666.230108.peg.164 CDS JH724260.1 1109833 1110603 1 + 771 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230108.peg.165 CDS JH724260.1 1112031 1110718 -3 - 1314 GTP-binding protein EngA Universal GTPases
fig|6666666.230108.peg.166 CDS JH724260.1 1112962 1112081 -1 - 882 GTP-binding protein Era Bacterial Cell Division;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.230108.peg.167 CDS JH724260.1 1114051 1113047 -1 - 1005 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) - none -
fig|6666666.230108.peg.168 CDS JH724260.1 1114951 1114373 -1 - 579 COG1399 protein in cluster with ribosomal protein L32p, Bacteroidetes/Chlorobi subfamily - none -
fig|6666666.230108.peg.169 CDS JH724260.1 1120691 1120545 -2 - 147 hypothetical protein - none -
fig|6666666.230108.peg.170 CDS JH724260.1 1120815 1120955 3 + 141 hypothetical protein - none -
fig|6666666.230108.peg.171 CDS JH724260.1 1121697 1121089 -3 - 609 putative DNA-binding protein - none -
fig|6666666.230108.peg.172 CDS JH724260.1 1121714 1121908 2 + 195 hypothetical protein - none -
fig|6666666.230108.peg.173 CDS JH724260.1 1122661 1121942 -1 - 720 FIG00402811: hypothetical protein - none -
fig|6666666.230108.peg.174 CDS JH724260.1 1124249 1122849 -2 - 1401 Outer membrane protein oprM - none -
fig|6666666.230108.peg.175 CDS JH724260.1 1127472 1124281 -3 - 3192 RND efflux system, inner membrane transporter CmeB Multidrug Resistance Efflux Pumps
fig|6666666.230108.peg.176 CDS JH724260.1 1128590 1127493 -2 - 1098 Multidrug resistance protein - none -
fig|6666666.230108.peg.177 CDS JH724260.1 1128799 1129635 1 + 837 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.178 CDS JH724260.1 1129726 1131393 1 + 1668 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230108.peg.179 CDS JH724260.1 1132902 1131394 -3 - 1509 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) - none -
fig|6666666.230108.peg.180 CDS JH724260.1 1133593 1132889 -1 - 705 putative periplasmic protein - none -
fig|6666666.230108.peg.181 CDS JH724260.1 1133594 1133785 2 + 192 hypothetical protein - none -
fig|6666666.230108.peg.182 CDS JH724260.1 1135172 1133793 -2 - 1380 putative periplasmic protein - none -
fig|6666666.230108.peg.183 CDS JH724260.1 1135541 1135296 -2 - 246 FIG00936253: hypothetical protein - none -
fig|6666666.230108.peg.184 CDS JH724260.1 1138811 1135641 -2 - 3171 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA Cobalt-zinc-cadmium resistance;
Cobalt-zinc-cadmium resistance
fig|6666666.230108.peg.185 CDS JH724260.1 1139957 1138914 -2 - 1044 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.230108.peg.186 CDS JH724260.1 1141287 1139968 -3 - 1320 Outer membrane efflux protein precursor - none -
fig|6666666.230108.peg.187 CDS JH724260.1 1141983 1141354 -3 - 630 Transcriptional regulator, TetR family - none -
fig|6666666.230108.peg.188 CDS JH724260.1 1143668 1142172 -2 - 1497 Histidine ammonia-lyase (EC 4.3.1.3) Histidine Degradation
fig|6666666.230108.peg.189 CDS JH724260.1 1144294 1143665 -1 - 630 Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.230108.peg.190 CDS JH724260.1 1145596 1144343 -1 - 1254 Imidazolonepropionase (EC 3.5.2.7) Histidine Degradation
fig|6666666.230108.peg.191 CDS JH724260.1 1146550 1145660 -1 - 891 Glutamate formiminotransferase (EC 2.1.2.5) @ Glutamate formyltransferase 5-FCL-like protein;
Histidine Degradation
fig|6666666.230108.peg.192 CDS JH724260.1 1148680 1146698 -1 - 1983 Urocanate hydratase (EC 4.2.1.49) Histidine Degradation
fig|6666666.230108.peg.193 CDS JH724260.1 1149063 1149731 3 + 669 hypothetical protein - none -
fig|6666666.230108.peg.194 CDS JH724260.1 1150110 1149760 -3 - 351 FIG00406490: hypothetical protein - none -
fig|6666666.230108.peg.195 CDS JH724260.1 1150543 1150821 1 + 279 FIG00417315: hypothetical protein - none -
fig|6666666.230108.peg.196 CDS JH724260.1 1150818 1151438 3 + 621 putative surface protein - none -
fig|6666666.230108.peg.197 CDS JH724260.1 1151886 1151668 -3 - 219 hypothetical protein - none -
fig|6666666.230108.peg.198 CDS JH724260.1 1151899 1152114 1 + 216 hypothetical protein - none -
fig|6666666.230108.peg.199 CDS JH724260.1 1152776 1152132 -2 - 645 FIG00405371: hypothetical protein - none -
fig|6666666.230108.peg.200 CDS JH724260.1 1152873 1154801 3 + 1929 MutS-related protein, family 1 DNA repair, bacterial MutL-MutS system
fig|6666666.230108.peg.201 CDS JH724260.1 1155381 1154842 -3 - 540 FIG00404196: hypothetical protein - none -
fig|6666666.230108.peg.202 CDS JH724260.1 1155916 1155491 -1 - 426 FIG00404648: hypothetical protein - none -
fig|6666666.230108.peg.203 CDS JH724260.1 1156492 1156046 -1 - 447 LSU ribosomal protein L17p - none -
fig|6666666.230108.peg.204 CDS JH724260.1 1157545 1156553 -1 - 993 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.230108.peg.205 CDS JH724260.1 1158162 1157557 -3 - 606 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.230108.peg.206 CDS JH724260.1 1158669 1158280 -3 - 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.230108.peg.207 CDS JH724260.1 1159061 1158681 -2 - 381 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.230108.peg.208 CDS JH724260.1 1159440 1159222 -3 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.230108.peg.209 CDS JH724260.1 1160250 1159450 -3 - 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.230108.peg.210 CDS JH724260.1 1161607 1160264 -1 - 1344 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.230108.peg.211 CDS JH724260.1 1162058 1161612 -2 - 447 LSU ribosomal protein L15p (L27Ae) - none -
fig|6666666.230108.peg.212 CDS JH724260.1 1162795 1162277 -1 - 519 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation;
Ribosome SSU bacterial
fig|6666666.230108.peg.213 CDS JH724260.1 1163064 1162801 -3 - 264 LSU ribosomal protein L18p (L5e) - none -
fig|6666666.230108.peg.214 CDS JH724260.1 1163735 1163166 -2 - 570 LSU ribosomal protein L6p (L9e) - none -
fig|6666666.230108.peg.215 CDS JH724260.1 1164080 1163751 -2 - 330 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.230108.peg.216 CDS JH724260.1 1164501 1164202 -3 - 300 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.230108.peg.217 CDS JH724260.1 1165063 1164506 -1 - 558 LSU ribosomal protein L5p (L11e) - none -
fig|6666666.230108.peg.218 CDS JH724260.1 1165383 1165063 -3 - 321 LSU ribosomal protein L24p (L26e) - none -
fig|6666666.230108.peg.219 CDS JH724260.1 1165769 1165404 -2 - 366 LSU ribosomal protein L14p (L23e) - none -
fig|6666666.230108.peg.220 CDS JH724260.1 1166029 1165772 -1 - 258 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.230108.peg.221 CDS JH724260.1 1166235 1166038 -3 - 198 LSU ribosomal protein L29p (L35e) - none -
fig|6666666.230108.peg.222 CDS JH724260.1 1166567 1166241 -2 - 327 LSU ribosomal protein L16p (L10e) - none -
fig|6666666.230108.peg.223 CDS JH724260.1 1167428 1166697 -2 - 732 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.230108.peg.224 CDS JH724260.1 1167844 1167434 -1 - 411 LSU ribosomal protein L22p (L17e) - none -
fig|6666666.230108.peg.225 CDS JH724260.1 1168087 1167881 -1 - 207 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.230108.peg.226 CDS JH724260.1 1168995 1168171 -3 - 825 LSU ribosomal protein L2p (L8e) - none -
fig|6666666.230108.peg.227 CDS JH724260.1 1169294 1169001 -2 - 294 LSU ribosomal protein L23p (L23Ae) - none -
fig|6666666.230108.peg.228 CDS JH724260.1 1169817 1169311 -3 - 507 LSU ribosomal protein L4p (L1e) - none -
fig|6666666.230108.peg.229 CDS JH724260.1 1170524 1169937 -2 - 588 LSU ribosomal protein L3p (L3e) - none -
fig|6666666.230108.peg.230 CDS JH724260.1 1170879 1170574 -3 - 306 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.230108.peg.231 CDS JH724260.1 1173083 1170966 -2 - 2118 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.230108.peg.232 CDS JH724260.1 1173533 1173144 -2 - 390 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.230108.peg.233 CDS JH724260.1 1174177 1173776 -1 - 402 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.230108.peg.234 CDS JH724260.1 1174606 1174295 -1 - 312 FIG00649583: hypothetical protein - none -
fig|6666666.230108.peg.235 CDS JH724260.1 1179172 1174877 -1 - 4296 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.230108.peg.236 CDS JH724260.1 1183093 1179281 -1 - 3813 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.230108.peg.237 CDS JH724260.1 1183576 1183199 -1 - 378 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster
fig|6666666.230108.peg.238 CDS JH724260.1 1184159 1183638 -2 - 522 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster
fig|6666666.230108.peg.239 CDS JH724260.1 1184873 1184175 -2 - 699 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster
fig|6666666.230108.peg.240 CDS JH724260.1 1185332 1184889 -2 - 444 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster
fig|6666666.230108.peg.241 CDS JH724260.1 1185934 1185392 -1 - 543 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.230108.peg.242 CDS JH724260.1 1186135 1185947 -1 - 189 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.230108.peg.243 CDS JH724260.1 1187463 1186279 -3 - 1185 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.230108.peg.244 CDS JH724260.1 1188276 1187977 -3 - 300 Ribosome hibernation protein YhbH Ribosome activity modulation
fig|6666666.230108.peg.245 CDS JH724260.1 1189179 1188295 -3 - 885 Integrase, site-specific recombinase - none -
fig|6666666.230108.peg.246 CDS JH724260.1 1189444 1189253 -1 - 192 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.230108.peg.247 CDS JH724260.1 1189658 1191517 2 + 1860 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-)
fig|6666666.230108.peg.248 CDS JH724260.1 1191522 1192034 3 + 513 N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230108.peg.249 CDS JH724260.1 1193347 1192127 -1 - 1221 Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase (EC 2.4.99.12) [often with (EC 2.4.99.13) also] - none -
fig|6666666.230108.peg.250 CDS JH724260.1 1194905 1193379 -2 - 1527 Glutamyl-tRNA synthetase (EC 6.1.1.17) tRNA aminoacylation, Glu and Gln
fig|6666666.230108.peg.251 CDS JH724260.1 1195003 1197063 1 + 2061 Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog CBSS-56780.10.peg.1536
fig|6666666.230108.peg.252 CDS JH724260.1 1197075 1197842 3 + 768 FIG00412745: hypothetical protein - none -
fig|6666666.230108.peg.253 CDS JH724260.1 1197976 1198929 1 + 954 Mobile element protein - none -
fig|6666666.230108.peg.254 CDS JH724260.1 1199370 1202399 3 + 3030 hypothetical protein - none -
fig|6666666.230108.peg.255 CDS JH724260.1 1202586 1205051 3 + 2466 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.230108.peg.256 CDS JH724260.1 1205073 1205534 3 + 462 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster
fig|6666666.230108.peg.257 CDS JH724260.1 1207672 1205531 -1 - 2142 putative helicase - none -
fig|6666666.230108.peg.258 CDS JH724260.1 1208022 1208645 3 + 624 FIG00416553: hypothetical protein - none -
fig|6666666.230108.peg.259 CDS JH724260.1 1208668 1208781 1 + 114 hypothetical protein - none -
fig|6666666.230108.peg.260 CDS JH724260.1 1211556 1208863 -3 - 2694 Phage tail fiber protein Phage tail fiber proteins
fig|6666666.230108.peg.261 CDS JH724260.1 1212822 1211869 -3 - 954 Mobile element protein - none -
fig|6666666.230108.peg.262 CDS JH724260.1 1213119 1213928 3 + 810 hypothetical protein - none -
fig|6666666.230108.peg.263 CDS JH724260.1 1213925 1214716 2 + 792 hypothetical protein - none -
fig|6666666.230108.peg.264 CDS JH724260.1 1215089 1214781 -2 - 309 hypothetical protein - none -
fig|6666666.230108.peg.265 CDS JH724260.1 1218571 1215329 -1 - 3243 hypothetical protein - none -
fig|6666666.230108.peg.266 CDS JH724260.1 1220004 1219057 -3 - 948 Mobile element protein - none -
fig|6666666.230108.peg.267 CDS JH724260.1 1221643 1220696 -1 - 948 Mobile element protein - none -
fig|6666666.230108.peg.268 CDS JH724260.1 1222002 1224863 3 + 2862 hypothetical protein - none -
fig|6666666.230108.peg.269 CDS JH724260.1 1225157 1225300 2 + 144 hypothetical protein - none -
fig|6666666.230108.peg.270 CDS JH724260.1 1225647 1226600 3 + 954 Mobile element protein - none -
fig|6666666.230108.peg.271 CDS JH724260.1 1227078 1230347 3 + 3270 putative cell surface protein - none -
fig|6666666.230108.peg.272 CDS JH724260.1 1230438 1230779 3 + 342 hypothetical protein - none -
fig|6666666.230108.peg.273 CDS JH724260.1 1230944 1232071 2 + 1128 hypothetical protein - none -
fig|6666666.230108.peg.274 CDS JH724260.1 1232469 1232648 3 + 180 hypothetical protein - none -
fig|6666666.230108.peg.275 CDS JH724260.1 1233341 1233469 2 + 129 hypothetical protein - none -
fig|6666666.230108.peg.276 CDS JH724260.1 1234475 1236955 2 + 2481 hypothetical protein - none -
fig|6666666.230108.peg.277 CDS JH724260.1 1237494 1237345 -3 - 150 hypothetical protein - none -
fig|6666666.230108.peg.278 CDS JH724260.1 1238024 1237464 -2 - 561 FIG00937641: hypothetical protein - none -
fig|6666666.230108.peg.279 CDS JH724260.1 1238186 1238683 2 + 498 FIG01201438: hypothetical protein - none -
fig|6666666.230108.peg.280 CDS JH724260.1 1238964 1239692 3 + 729 Nitric oxide-dependent regulator DnrN or NorA Iron-sulfur cluster assembly;
Nitrosative stress
fig|6666666.230108.peg.281 CDS JH724260.1 1239689 1240048 2 + 360 probable uroporphyrin-III c-methyltransferase (EC 2.1.1.107) - none -
fig|6666666.230108.peg.282 CDS JH724260.1 1242554 1240119 -2 - 2436 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.230108.peg.283 CDS JH724260.1 1242909 1242688 -3 - 222 FIG00935798: hypothetical protein - none -
fig|6666666.230108.peg.284 CDS JH724260.1 1243534 1242980 -1 - 555 ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17) - none -
fig|6666666.230108.peg.285 CDS JH724260.1 1244257 1243625 -1 - 633 FIG00412153: hypothetical protein - none -
fig|6666666.230108.peg.286 CDS JH724260.1 1245758 1244262 -2 - 1497 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.230108.peg.287 CDS JH724260.1 1248317 1245855 -2 - 2463 putative large secreted protein - none -
fig|6666666.230108.peg.288 CDS JH724260.1 1250705 1248492 -2 - 2214 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.289 CDS JH724260.1 1253335 1250753 -1 - 2583 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.290 CDS JH724260.1 1256359 1253477 -1 - 2883 Alpha-xylosidase (EC 3.2.1.-) Xylose utilization
fig|6666666.230108.peg.291 CDS JH724260.1 1260511 1256498 -1 - 4014 FIG00408146: hypothetical protein - none -
fig|6666666.230108.peg.292 CDS JH724260.1 1262581 1260800 -1 - 1782 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230108.peg.293 CDS JH724260.1 1262602 1262742 1 + 141 hypothetical protein - none -
fig|6666666.230108.peg.294 CDS JH724260.1 1262834 1264402 2 + 1569 Beta-xylosidase (EC 3.2.1.37) Xylose utilization
fig|6666666.230108.peg.295 CDS JH724260.1 1267418 1264797 -2 - 2622 FIG01287877: hypothetical protein - none -
fig|6666666.230108.peg.296 CDS JH724260.1 1269397 1267427 -1 - 1971 FIG00412438: hypothetical protein - none -
fig|6666666.230108.peg.297 CDS JH724260.1 1271118 1269439 -3 - 1680 SusD, outer membrane protein Cellulosome
fig|6666666.230108.peg.298 CDS JH724260.1 1274326 1271132 -1 - 3195 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.299 CDS JH724260.1 1274674 1275633 1 + 960 FIG00414698: hypothetical protein - none -
fig|6666666.230108.peg.300 CDS JH724260.1 1276384 1275644 -1 - 741 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.301 CDS JH724260.1 1276844 1276455 -2 - 390 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.302 CDS JH724260.1 1276851 1276988 3 + 138 hypothetical protein - none -
fig|6666666.230108.peg.303 CDS JH724260.1 1277925 1277263 -3 - 663 FIG00416635: hypothetical protein - none -
fig|6666666.230108.peg.304 CDS JH724260.1 1278419 1279339 2 + 921 Mobile element protein - none -
fig|6666666.230108.peg.305 CDS JH724260.1 1279732 1281069 1 + 1338 Integrase IntN1 - none -
fig|6666666.230108.peg.306 CDS JH724260.1 1281158 1281895 2 + 738 hypothetical protein - none -
fig|6666666.230108.peg.307 CDS JH724260.1 1282849 1283790 1 + 942 hypothetical protein - none -
fig|6666666.230108.peg.308 CDS JH724260.1 1283960 1284274 2 + 315 hypothetical protein - none -
fig|6666666.230108.peg.309 CDS JH724260.1 1284279 1285469 3 + 1191 FIG00897594: hypothetical protein - none -
fig|6666666.230108.peg.310 CDS JH724260.1 1285702 1286658 1 + 957 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230108.peg.311 CDS JH724260.1 1286869 1288272 1 + 1404 mobilization protein - none -
fig|6666666.230108.peg.312 CDS JH724260.1 1288672 1289364 1 + 693 hypothetical protein - none -
fig|6666666.230108.peg.313 CDS JH724260.1 1289379 1290560 3 + 1182 hypothetical protein - none -
fig|6666666.230108.peg.314 CDS JH724260.1 1290557 1291330 2 + 774 hypothetical protein - none -
fig|6666666.230108.peg.315 CDS JH724260.1 1291734 1291979 3 + 246 hypothetical protein - none -
fig|6666666.230108.peg.316 CDS JH724260.1 1292207 1292031 -2 - 177 hypothetical protein - none -
fig|6666666.230108.peg.317 CDS JH724260.1 1293087 1292278 -3 - 810 FIG00414340: hypothetical protein - none -
fig|6666666.230108.peg.318 CDS JH724260.1 1293504 1294589 3 + 1086 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) Mannose Metabolism
fig|6666666.230108.peg.319 CDS JH724260.1 1295031 1294690 -3 - 342 HIT family protein - none -
fig|6666666.230108.peg.320 CDS JH724260.1 1295587 1295132 -1 - 456 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.230108.peg.321 CDS JH724260.1 1296920 1295787 -2 - 1134 FIG00897677: hypothetical protein - none -
fig|6666666.230108.peg.322 CDS JH724260.1 1297146 1299290 3 + 2145 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-1806.1.peg.3045;
CBSS-350688.3.peg.1509
fig|6666666.230108.peg.323 CDS JH724260.1 1299324 1299449 3 + 126 hypothetical protein - none -
fig|6666666.230108.peg.324 CDS JH724260.1 1299490 1300035 1 + 546 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.325 CDS JH724260.1 1300132 1301067 1 + 936 putative anti-sigma factor - none -
fig|6666666.230108.peg.326 CDS JH724260.1 1301471 1304581 2 + 3111 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.327 CDS JH724260.1 1304594 1306195 2 + 1602 FIG00897230: hypothetical protein - none -
fig|6666666.230108.peg.328 CDS JH724260.1 1308396 1306192 -3 - 2205 Pyrophosphate-energized proton pump (EC 3.6.1.1) Phosphate metabolism
fig|6666666.230108.peg.329 CDS JH724260.1 1308640 1310544 1 + 1905 hypothetical protein - none -
fig|6666666.230108.peg.330 CDS JH724260.1 1310958 1310638 -3 - 321 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.230108.peg.331 CDS JH724260.1 1312294 1311029 -1 - 1266 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.230108.peg.332 CDS JH724260.1 1313660 1312317 -2 - 1344 Iron-sulfur cluster assembly protein SufD Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.230108.peg.333 CDS JH724260.1 1314433 1313678 -1 - 756 Iron-sulfur cluster assembly ATPase protein SufC Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.230108.peg.334 CDS JH724260.1 1315932 1314478 -3 - 1455 Iron-sulfur cluster assembly protein SufB Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.230108.peg.335 CDS JH724260.1 1316493 1315981 -3 - 513 Colicin V production protein Colicin V and Bacteriocin Production Cluster
fig|6666666.230108.peg.336 CDS JH724260.1 1319677 1316630 -1 - 3048 Translation initiation factor 2 CBSS-138119.3.peg.2719;
CBSS-350688.3.peg.1509;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.230108.peg.337 CDS JH724260.1 1321061 1319796 -2 - 1266 Transcription termination protein NusA CBSS-350688.3.peg.1509;
NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.230108.peg.338 CDS JH724260.1 1321533 1321066 -3 - 468 FIG000325: clustered with transcription termination protein NusA CBSS-350688.3.peg.1509;
NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.230108.peg.339 CDS JH724260.1 1324451 1322004 -2 - 2448 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.340 CDS JH724260.1 1326954 1324630 -3 - 2325 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.341 CDS JH724260.1 1328155 1326959 -1 - 1197 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230108.peg.342 CDS JH724260.1 1329379 1328201 -1 - 1179 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230108.peg.343 CDS JH724260.1 1330322 1329438 -2 - 885 Endo-1,4-beta-xylanase Z - none -
fig|6666666.230108.peg.344 CDS JH724260.1 1332818 1330410 -2 - 2409 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.345 CDS JH724260.1 1334480 1332930 -2 - 1551 FIG00411172: hypothetical protein - none -
fig|6666666.230108.peg.346 CDS JH724260.1 1336289 1334532 -2 - 1758 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.347 CDS JH724260.1 1337116 1337355 1 + 240 transposase - none -
fig|6666666.230108.peg.348 CDS JH724260.1 1338853 1337480 -1 - 1374 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.349 CDS JH724260.1 1340867 1338948 -2 - 1920 Carboxylesterase type B - none -
fig|6666666.230108.peg.350 CDS JH724260.1 1340883 1344965 3 + 4083 DNA-binding response regulator, AraC family - none -
fig|6666666.230108.peg.351 CDS JH724260.1 1345981 1345169 -1 - 813 hypothetical protein - none -
fig|6666666.230108.peg.352 CDS JH724260.1 1347708 1346047 -3 - 1662 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.353 CDS JH724260.1 1350792 1347727 -3 - 3066 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.354 CDS JH724260.1 1351001 1350864 -2 - 138 hypothetical protein - none -
fig|6666666.230108.peg.355 CDS JH724260.1 1351127 1355173 2 + 4047 DNA-binding response regulator, AraC family - none -
fig|6666666.230108.peg.356 CDS JH724260.1 1356961 1355273 -1 - 1689 hypothetical protein - none -
fig|6666666.230108.peg.357 CDS JH724260.1 1357100 1357498 2 + 399 FIG00402719: hypothetical protein - none -
fig|6666666.230108.peg.358 CDS JH724260.1 1357781 1357521 -2 - 261 hypothetical protein - none -
fig|6666666.230108.peg.359 CDS JH724260.1 1358753 1358049 -2 - 705 Putative predicted metal-dependent hydrolase - none -
fig|6666666.230108.peg.360 CDS JH724260.1 1358872 1358750 -1 - 123 hypothetical protein - none -
fig|6666666.230108.peg.361 CDS JH724260.1 1359041 1359901 2 + 861 FIG00402937: hypothetical protein - none -
fig|6666666.230108.peg.362 CDS JH724260.1 1362387 1360051 -3 - 2337 FIG00413484: hypothetical protein - none -
fig|6666666.230108.peg.363 CDS JH724260.1 1362804 1362400 -3 - 405 hypothetical protein - none -
fig|6666666.230108.peg.364 CDS JH724260.1 1364638 1362959 -1 - 1680 TPR-repeat-containing proteins - none -
fig|6666666.230108.peg.365 CDS JH724260.1 1365400 1364918 -1 - 483 FIG00404769: hypothetical protein - none -
fig|6666666.230108.peg.366 CDS JH724260.1 1365899 1365390 -2 - 510 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.367 CDS JH724260.1 1366730 1365960 -2 - 771 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230108.peg.368 CDS JH724260.1 1368624 1366732 -3 - 1893 Biosynthetic arginine decarboxylase (EC 4.1.1.19) Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.230108.peg.369 CDS JH724260.1 1369287 1368760 -3 - 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.230108.peg.370 CDS JH724260.1 1369952 1369350 -2 - 603 Nitroreductase family protein - none -
fig|6666666.230108.peg.371 CDS JH724260.1 1370070 1370705 3 + 636 Ribonuclease HI-related protein 3 Ribonuclease H
fig|6666666.230108.peg.372 CDS JH724260.1 1371686 1370799 -2 - 888 Sugar phosphate isomerase/epimerase - none -
fig|6666666.230108.peg.373 CDS JH724260.1 1372599 1371724 -3 - 876 Probable secreted glycosyl hydrolase - none -
fig|6666666.230108.peg.374 CDS JH724260.1 1374077 1372671 -2 - 1407 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) - none -
fig|6666666.230108.peg.375 CDS JH724260.1 1375304 1374225 -2 - 1080 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) - none -
fig|6666666.230108.peg.376 CDS JH724260.1 1379317 1379156 -1 - 162 hypothetical protein - none -
fig|6666666.230108.peg.377 CDS JH724260.1 1381337 1379499 -2 - 1839 ABC transporter, ATP-binding protein - none -
fig|6666666.230108.peg.378 CDS JH724260.1 1381784 1383226 2 + 1443 FIG00414179: hypothetical protein - none -
fig|6666666.230108.peg.379 CDS JH724260.1 1383355 1383750 1 + 396 hypothetical protein - none -
fig|6666666.230108.peg.380 CDS JH724260.1 1383872 1385398 2 + 1527 hypothetical protein - none -
fig|6666666.230108.peg.381 CDS JH724260.1 1385570 1385451 -2 - 120 hypothetical protein - none -
fig|6666666.230108.peg.382 CDS JH724260.1 1386419 1385622 -2 - 798 hypothetical protein - none -
fig|6666666.230108.peg.383 CDS JH724260.1 1386538 1387641 1 + 1104 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230108.peg.384 CDS JH724260.1 1388464 1387646 -1 - 819 Colanic acid biosynthesis glycosyl transferase WcaE - none -
fig|6666666.230108.peg.385 CDS JH724260.1 1389297 1388461 -3 - 837 Beta-1,3-glucosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.230108.peg.386 CDS JH724260.1 1390241 1389357 -2 - 885 Streptomycin biosynthesis StrF domain protein - none -
fig|6666666.230108.peg.387 CDS JH724260.1 1391236 1390271 -1 - 966 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230108.peg.388 CDS JH724260.1 1392192 1391299 -3 - 894 CDP-glycerol: N-acetyl-beta-D-mannosaminyl-1,4-N-acetyl-D-glucosaminyldiphosphoundecaprenyl glycerophosphotransferase - none -
fig|6666666.230108.peg.389 CDS JH724260.1 1392226 1392348 1 + 123 hypothetical protein - none -
fig|6666666.230108.peg.390 CDS JH724260.1 1392663 1392535 -3 - 129 hypothetical protein - none -
fig|6666666.230108.peg.391 CDS JH724260.1 1392688 1394439 1 + 1752 Phosphoglycerol transferase MdoB related protein, alkaline phosphatase superfamily - none -
fig|6666666.230108.peg.392 CDS JH724260.1 1394523 1395272 3 + 750 FIG00414762: hypothetical protein - none -
fig|6666666.230108.peg.393 CDS JH724260.1 1395309 1395890 3 + 582 Phosphoheptose isomerase 1 (EC 5.3.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.230108.peg.394 CDS JH724260.1 1395883 1396371 1 + 489 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.230108.peg.395 CDS JH724260.1 1396368 1397798 3 + 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.230108.peg.396 CDS JH724260.1 1398777 1397779 -3 - 999 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.230108.peg.397 CDS JH724260.1 1399086 1400003 3 + 918 PUTATIVE SIGNAL PEPTIDE PROTEIN - none -
fig|6666666.230108.peg.398 CDS JH724260.1 1400852 1400025 -2 - 828 Lipopolysaccharide cholinephosphotransferase LicD1 (EC 2.7.8.-) - none -
fig|6666666.230108.peg.399 CDS JH724260.1 1401601 1400870 -1 - 732 Choline permease LicB - none -
fig|6666666.230108.peg.400 CDS JH724260.1 1402635 1401598 -3 - 1038 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.230108.peg.401 CDS JH724260.1 1403784 1402639 -3 - 1146 mannosyltransferase - none -
fig|6666666.230108.peg.402 CDS JH724260.1 1404028 1403870 -1 - 159 hypothetical protein - none -
fig|6666666.230108.peg.403 CDS JH724260.1 1404414 1405457 3 + 1044 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230108.peg.404 CDS JH724260.1 1405691 1407427 2 + 1737 FIG00416859: hypothetical protein - none -
fig|6666666.230108.peg.405 CDS JH724260.1 1408005 1407418 -3 - 588 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
De Novo Purine Biosynthesis
fig|6666666.230108.peg.406 CDS JH724260.1 1408155 1408391 3 + 237 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230108.peg.407 CDS JH724260.1 1408413 1409678 3 + 1266 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) - none -
fig|6666666.230108.peg.408 CDS JH724260.1 1409719 1410564 1 + 846 Ribonuclease III (EC 3.1.26.3) RNA processing and degradation, bacterial
fig|6666666.230108.peg.409 CDS JH724260.1 1411440 1410523 -3 - 918 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.230108.peg.410 CDS JH724260.1 1411656 1413167 3 + 1512 putative auxin-regulated protein - none -
fig|6666666.230108.peg.411 CDS JH724260.1 1414194 1413313 -3 - 882 FIG00897142: hypothetical protein - none -
fig|6666666.230108.peg.412 CDS JH724260.1 1415385 1414294 -3 - 1092 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.230108.peg.413 CDS JH724260.1 1415472 1416947 3 + 1476 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.230108.peg.414 CDS JH724260.1 1419142 1417106 -1 - 2037 putative patatin-like phospholipase - none -
fig|6666666.230108.peg.415 CDS JH724260.1 1420826 1419282 -2 - 1545 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230108.peg.416 CDS JH724260.1 1422022 1420823 -1 - 1200 Glucuronyl hydrolase - none -
fig|6666666.230108.peg.417 CDS JH724260.1 1422201 1422644 3 + 444 Phenylacetic acid degradation protein PaaD, thioesterase - none -
fig|6666666.230108.peg.418 CDS JH724260.1 1422697 1423293 1 + 597 hypothetical protein - none -
fig|6666666.230108.peg.419 CDS JH724260.1 1425373 1423418 -1 - 1956 FIG00899092: hypothetical protein - none -
fig|6666666.230108.peg.420 CDS JH724260.1 1425682 1426857 1 + 1176 Membrane fusion protein of RND family multidrug efflux pump Multidrug Resistance Efflux Pumps
fig|6666666.230108.peg.421 CDS JH724260.1 1426912 1430331 1 + 3420 RND efflux system, inner membrane transporter CmeB Multidrug Resistance Efflux Pumps
fig|6666666.230108.peg.422 CDS JH724260.1 1430351 1431736 2 + 1386 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.230108.peg.423 CDS JH724260.1 1431836 1432603 2 + 768 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) Llipid A biosynthesis cluster
fig|6666666.230108.peg.424 CDS JH724260.1 1433901 1433167 -3 - 735 FIG00406137: hypothetical protein - none -
fig|6666666.230108.peg.425 CDS JH724260.1 1434974 1433892 -2 - 1083 MdsC protein - none -
fig|6666666.230108.peg.426 CDS JH724260.1 1435206 1439237 3 + 4032 FIG00939280: hypothetical protein - none -
fig|6666666.230108.peg.427 CDS JH724260.1 1439375 1439247 -2 - 129 hypothetical protein - none -
fig|6666666.230108.peg.428 CDS JH724260.1 1439367 1440926 3 + 1560 Arylsulfatase (EC 3.1.6.1) Galactosylceramide and Sulfatide metabolism
fig|6666666.230108.peg.429 CDS JH724260.1 1441097 1444177 2 + 3081 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.430 CDS JH724260.1 1444243 1445694 1 + 1452 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.431 CDS JH724260.1 1448745 1446100 -3 - 2646 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.432 CDS JH724260.1 1451234 1448754 -2 - 2481 chondroitinase AC precursor - none -
fig|6666666.230108.peg.433 CDS JH724260.1 1451374 1451213 -1 - 162 hypothetical protein - none -
fig|6666666.230108.peg.434 CDS JH724260.1 1451429 1452562 2 + 1134 FIG01093326: hypothetical protein - none -
fig|6666666.230108.peg.435 CDS JH724260.1 1452565 1453533 1 + 969 Probable transcriptional regulator - none -
fig|6666666.230108.peg.436 CDS JH724260.1 1456828 1453742 -1 - 3087 Chondroitinase (chondroitin lyase) - none -
fig|6666666.230108.peg.437 CDS JH724260.1 1457473 1456835 -1 - 639 FIG00411032: hypothetical protein - none -
fig|6666666.230108.peg.438 CDS JH724260.1 1458151 1457639 -1 - 513 FIG00407889: hypothetical protein - none -
fig|6666666.230108.peg.439 CDS JH724260.1 1459503 1458229 -3 - 1275 FIG00937754: hypothetical protein - none -
fig|6666666.230108.peg.440 CDS JH724260.1 1459600 1460364 1 + 765 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230108.peg.441 CDS JH724260.1 1460371 1461864 1 + 1494 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.230108.peg.442 CDS JH724260.1 1461861 1462796 3 + 936 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.230108.peg.443 CDS JH724260.1 1462886 1463506 2 + 621 FIG00649844: hypothetical protein - none -
fig|6666666.230108.peg.444 CDS JH724260.1 1463579 1463710 2 + 132 hypothetical protein - none -
fig|6666666.230108.peg.445 CDS JH724260.1 1466823 1463938 -3 - 2886 hypothetical protein - none -
fig|6666666.230108.peg.446 CDS JH724260.1 1467109 1468920 1 + 1812 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.447 CDS JH724260.1 1469104 1472142 1 + 3039 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.448 CDS JH724260.1 1472166 1473920 3 + 1755 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.449 CDS JH724260.1 1473960 1474352 3 + 393 hypothetical protein - none -
fig|6666666.230108.peg.450 CDS JH724260.1 1474390 1475439 1 + 1050 hypothetical protein - none -
fig|6666666.230108.peg.451 CDS JH724260.1 1475491 1478433 1 + 2943 Gluconolactonase (EC 3.1.1.17) Entner-Doudoroff Pathway
fig|6666666.230108.peg.452 CDS JH724260.1 1478627 1481287 2 + 2661 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.453 CDS JH724260.1 1481306 1483669 2 + 2364 Glucuronyl hydrolase - none -
fig|6666666.230108.peg.454 CDS JH724260.1 1483878 1486322 3 + 2445 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.455 CDS JH724260.1 1486416 1487228 3 + 813 D-mannonate oxidoreductase (EC 1.1.1.57) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230108.peg.456 CDS JH724260.1 1487263 1488435 1 + 1173 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230108.peg.457 CDS JH724260.1 1489103 1488570 -2 - 534 Aquaporin Z Osmoregulation
fig|6666666.230108.peg.458 CDS JH724260.1 1489255 1489133 -1 - 123 Aquaporin Z Osmoregulation
fig|6666666.230108.peg.459 CDS JH724260.1 1491762 1489537 -3 - 2226 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.460 CDS JH724260.1 1493373 1492123 -3 - 1251 Endoglucanase C (EC 3.2.1.4) - none -
fig|6666666.230108.peg.461 CDS JH724260.1 1495171 1493579 -1 - 1593 Regulatory protein SusR Cellulosome
fig|6666666.230108.peg.462 CDS JH724260.1 1495278 1496462 3 + 1185 N-acetylglucosamine related transporter, NagX - none -
fig|6666666.230108.peg.463 CDS JH724260.1 1496462 1497061 2 + 600 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.230108.peg.464 CDS JH724260.1 1498295 1497048 -2 - 1248 FIG007959: peptidase, M16 family CBSS-1806.1.peg.3045;
CBSS-350688.3.peg.1509
fig|6666666.230108.peg.465 CDS JH724260.1 1498419 1499024 3 + 606 Arabinose 5-phosphate isomerase (EC 5.3.1.13) - none -
fig|6666666.230108.peg.466 CDS JH724260.1 1499012 1499941 2 + 930 Fructokinase (EC 2.7.1.4) - none -
fig|6666666.230108.peg.467 CDS JH724260.1 1500105 1501487 3 + 1383 FIG00415543: hypothetical protein - none -
fig|6666666.230108.peg.468 CDS JH724260.1 1501496 1502098 2 + 603 hypothetical protein - none -
fig|6666666.230108.peg.469 CDS JH724260.1 1502339 1502752 2 + 414 hypothetical protein - none -
fig|6666666.230108.peg.470 CDS JH724260.1 1502923 1503966 1 + 1044 Possible protein-tyrosine-phosphatase (EC 3.1.3.48) - none -
fig|6666666.230108.peg.471 CDS JH724260.1 1504111 1506066 1 + 1956 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.230108.peg.472 CDS JH724260.1 1506644 1506156 -2 - 489 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.230108.peg.473 CDS JH724260.1 1506776 1507711 2 + 936 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.230108.peg.474 CDS JH724260.1 1507907 1508473 2 + 567 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.230108.peg.475 CDS JH724260.1 1508687 1510246 2 + 1560 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.230108.peg.476 CDS JH724260.1 1512423 1510285 -3 - 2139 FIG00936757: hypothetical protein - none -
fig|6666666.230108.peg.477 CDS JH724260.1 1513801 1512440 -1 - 1362 FIG00761799: membrane protein - none -
fig|6666666.230108.peg.478 CDS JH724260.1 1515282 1513837 -3 - 1446 Polysaccharide biosynthesis protein - none -
fig|6666666.230108.peg.479 CDS JH724260.1 1516374 1515325 -3 - 1050 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.230108.peg.480 CDS JH724260.1 1516918 1516364 -1 - 555 hypothetical protein - none -
fig|6666666.230108.peg.481 CDS JH724260.1 1518094 1517015 -1 - 1080 hypothetical protein - none -
fig|6666666.230108.peg.482 CDS JH724260.1 1518393 1518827 3 + 435 hypothetical protein - none -
fig|6666666.230108.peg.483 CDS JH724260.1 1518999 1518868 -3 - 132 hypothetical protein - none -
fig|6666666.230108.peg.484 CDS JH724260.1 1519773 1519006 -3 - 768 probable DNA alkylation repair enzyme - none -
fig|6666666.230108.peg.485 CDS JH724260.1 1519905 1520909 3 + 1005 Aminopeptidase - none -
fig|6666666.230108.peg.486 CDS JH724260.1 1520935 1522167 1 + 1233 Spore maturation protein A-like protein Spore Core Dehydration
fig|6666666.230108.peg.487 CDS JH724260.1 1522235 1522648 2 + 414 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.230108.peg.488 CDS JH724260.1 1522911 1522720 -3 - 192 FIG00405963: hypothetical protein - none -
fig|6666666.230108.peg.489 CDS JH724260.1 1524099 1522975 -3 - 1125 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.490 CDS JH724260.1 1526171 1524141 -2 - 2031 FIG00938305: hypothetical protein - none -
fig|6666666.230108.peg.491 CDS JH724260.1 1527169 1526210 -1 - 960 endo-1,4-beta-xylanase - none -
fig|6666666.230108.peg.492 CDS JH724260.1 1528775 1527195 -2 - 1581 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230108.peg.493 CDS JH724260.1 1530690 1528870 -3 - 1821 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.494 CDS JH724260.1 1533812 1530702 -2 - 3111 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.495 CDS JH724260.1 1538205 1534252 -3 - 3954 DNA-binding response regulator, AraC family - none -
fig|6666666.230108.peg.496 CDS JH724260.1 1540128 1538311 -3 - 1818 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.497 CDS JH724260.1 1540375 1540238 -1 - 138 hypothetical protein - none -
fig|6666666.230108.peg.498 CDS JH724260.1 1541950 1540460 -1 - 1491 FIG00408294: hypothetical protein - none -
fig|6666666.230108.peg.499 CDS JH724260.1 1545113 1541970 -2 - 3144 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.500 CDS JH724260.1 1545427 1547301 1 + 1875 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.230108.peg.501 CDS JH724260.1 1547357 1547881 2 + 525 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.230108.peg.502 CDS JH724260.1 1548004 1549824 1 + 1821 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.230108.peg.503 CDS JH724260.1 1549905 1550357 3 + 453 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.230108.peg.504 CDS JH724260.1 1550357 1550695 2 + 339 FIG00649439: hypothetical protein - none -
fig|6666666.230108.peg.505 CDS JH724260.1 1550682 1551584 3 + 903 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.230108.peg.506 CDS JH724260.1 1552644 1551670 -3 - 975 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.230108.peg.507 CDS JH724260.1 1552732 1555587 1 + 2856 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.230108.peg.508 CDS JH724260.1 1555866 1556258 3 + 393 FIG00405367: hypothetical protein - none -
fig|6666666.230108.peg.509 CDS JH724260.1 1558199 1556412 -2 - 1788 putative outer membrane protein - none -
fig|6666666.230108.peg.510 CDS JH724260.1 1561318 1558256 -1 - 3063 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.511 CDS JH724260.1 1561522 1562937 1 + 1416 hypothetical protein - none -
fig|6666666.230108.peg.512 CDS JH724260.1 1563044 1563667 2 + 624 FIG00406942: hypothetical protein - none -
fig|6666666.230108.peg.513 CDS JH724260.1 1565554 1563938 -1 - 1617 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230108.peg.514 CDS JH724260.1 1565894 1566997 2 + 1104 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.230108.peg.515 CDS JH724260.1 1567075 1567887 1 + 813 FIG00403719: hypothetical protein - none -
fig|6666666.230108.peg.516 CDS JH724260.1 1567902 1568822 3 + 921 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.230108.peg.517 CDS JH724260.1 1568909 1569811 2 + 903 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.230108.peg.518 CDS JH724260.1 1569913 1572249 1 + 2337 Alpha-xylosidase (EC 3.2.1.-) Xylose utilization
fig|6666666.230108.peg.519 CDS JH724260.1 1572419 1574596 2 + 2178 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.520 CDS JH724260.1 1577188 1574708 -1 - 2481 alpha-rhamnosidase - none -
fig|6666666.230108.peg.521 CDS JH724260.1 1579501 1577351 -1 - 2151 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230108.peg.522 CDS JH724260.1 1580777 1579644 -2 - 1134 putative alpha-1,6-mannanase - none -
fig|6666666.230108.peg.523 CDS JH724260.1 1581940 1580792 -1 - 1149 hypothetical protein - none -
fig|6666666.230108.peg.524 CDS JH724260.1 1583584 1581974 -1 - 1611 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.525 CDS JH724260.1 1586683 1583600 -1 - 3084 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.230108.peg.526 CDS JH724260.1 647 456 -2 - 192 hypothetical protein - none -
fig|6666666.230108.peg.527 CDS JH724260.1 888 1715 3 + 828 hypothetical protein - none -
fig|6666666.230108.peg.528 CDS JH724260.1 1734 2675 3 + 942 hypothetical protein - none -
fig|6666666.230108.peg.529 CDS JH724260.1 2755 5757 1 + 3003 hypothetical protein - none -
fig|6666666.230108.peg.530 CDS JH724260.1 5761 5973 1 + 213 hypothetical protein - none -
fig|6666666.230108.peg.531 CDS JH724260.1 5973 6482 3 + 510 Antirestriction protein ArdA - none -
fig|6666666.230108.peg.532 CDS JH724260.1 6503 6817 2 + 315 hypothetical protein - none -
fig|6666666.230108.peg.533 CDS JH724260.1 6854 7198 2 + 345 hypothetical protein - none -
fig|6666666.230108.peg.534 CDS JH724260.1 7219 7506 1 + 288 hypothetical protein - none -
fig|6666666.230108.peg.535 CDS JH724260.1 7597 8526 1 + 930 hypothetical protein - none -
fig|6666666.230108.peg.536 CDS JH724260.1 8564 9151 2 + 588 FIG00897967: hypothetical protein - none -
fig|6666666.230108.peg.537 CDS JH724260.1 9148 9780 1 + 633 hypothetical protein - none -
fig|6666666.230108.peg.538 CDS JH724260.1 9833 9991 2 + 159 hypothetical protein - none -
fig|6666666.230108.peg.539 CDS JH724260.1 10004 11026 2 + 1023 FIG00896987: hypothetical protein - none -
fig|6666666.230108.peg.540 CDS JH724260.1 11037 11402 3 + 366 hypothetical protein - none -
fig|6666666.230108.peg.541 CDS JH724260.1 11405 12115 2 + 711 FIG00899242: hypothetical protein - none -
fig|6666666.230108.peg.542 CDS JH724260.1 12610 12176 -1 - 435 FIG00897117: hypothetical protein - none -
fig|6666666.230108.peg.543 CDS JH724260.1 12842 13132 2 + 291 FIG00898875: hypothetical protein - none -
fig|6666666.230108.peg.544 CDS JH724260.1 13175 14101 2 + 927 hypothetical protein - none -
fig|6666666.230108.peg.545 CDS JH724260.1 14708 14193 -2 - 516 Lysozyme-related protein - none -
fig|6666666.230108.peg.546 CDS JH724260.1 15228 14722 -3 - 507 Conjugative transposon protein TraQ Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.547 CDS JH724260.1 16134 15268 -3 - 867 Conjugative transposon protein TraP @ DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230108.peg.548 CDS JH724260.1 16633 16148 -1 - 486 Conjugative transposon protein TraO Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.549 CDS JH724260.1 17688 16723 -3 - 966 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.550 CDS JH724260.1 18998 17730 -2 - 1269 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.551 CDS JH724260.1 19287 18991 -3 - 297 hypothetical protein - none -
fig|6666666.230108.peg.552 CDS JH724260.1 19932 19309 -3 - 624 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.553 CDS JH724260.1 20960 19956 -2 - 1005 Conjugative transposon protein TraJ Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.554 CDS JH724260.1 21612 20983 -3 - 630 Conjugative transposon protein TraI Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.555 CDS JH724260.1 22677 21652 -3 - 1026 hypothetical protein - none -
fig|6666666.230108.peg.556 CDS JH724260.1 25219 22721 -1 - 2499 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.557 CDS JH724260.1 25548 25216 -3 - 333 Conjugative transposon protein TraF Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.558 CDS JH724260.1 25846 25550 -1 - 297 Mobile element protein - none -
fig|6666666.230108.peg.559 CDS JH724260.1 26260 26045 -1 - 216 hypothetical protein - none -
fig|6666666.230108.peg.560 CDS JH724260.1 26259 26774 3 + 516 UPF0398 protein ABC2016 - none -
fig|6666666.230108.peg.561 CDS JH724260.1 27180 26857 -3 - 324 hypothetical protein - none -
fig|6666666.230108.peg.562 CDS JH724260.1 27346 28230 1 + 885 ISSod11, transposase - none -
fig|6666666.230108.peg.563 CDS JH724260.1 28290 29264 3 + 975 Mobile element protein - none -
fig|6666666.230108.peg.564 CDS JH724260.1 29696 29292 -2 - 405 hypothetical protein - none -
fig|6666666.230108.peg.565 CDS JH724260.1 30065 30544 2 + 480 hypothetical protein - none -
fig|6666666.230108.peg.566 CDS JH724260.1 30537 30887 3 + 351 hypothetical protein - none -
fig|6666666.230108.peg.567 CDS JH724260.1 1589992 1588529 -1 - 1464 FIG00937589: hypothetical protein - none -
fig|6666666.230108.peg.568 CDS JH724260.1 1591241 1590012 -2 - 1230 putative alpha-1,6-mannanase - none -
fig|6666666.230108.peg.569 CDS JH724260.1 1593533 1591467 -2 - 2067 Putative glycosyl hydrolase of unknown function (DUF1680) - none -
fig|6666666.230108.peg.570 CDS JH724260.1 1597310 1593681 -2 - 3630 Alpha-mannosidase (EC 3.2.1.24) Mannose Metabolism
fig|6666666.230108.peg.571 CDS JH724260.1 1597642 1599591 1 + 1950 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.572 CDS JH724260.1 1599752 1603819 2 + 4068 DNA-binding response regulator, AraC family - none -
fig|6666666.230108.peg.573 CDS JH724260.1 1603860 1608098 3 + 4239 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.574 CDS JH724260.1 1610808 1608193 -3 - 2616 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.230108.peg.575 CDS JH724260.1 1612226 1611495 -2 - 732 Prohibitin - none -
fig|6666666.230108.peg.576 CDS JH724260.1 1613221 1612757 -1 - 465 hypothetical protein - none -
fig|6666666.230108.peg.577 CDS JH724260.1 1613574 1613434 -3 - 141 FIG00897497: hypothetical protein - none -
fig|6666666.230108.peg.578 CDS JH724260.1 1614202 1613846 -1 - 357 FIG00418096: hypothetical protein - none -
fig|6666666.230108.peg.579 CDS JH724260.1 1614402 1615667 3 + 1266 FIG00413271: hypothetical protein - none -
fig|6666666.230108.peg.580 CDS JH724260.1 1616178 1615753 -3 - 426 FIG00411736: hypothetical protein - none -
fig|6666666.230108.peg.581 CDS JH724260.1 1617335 1616469 -2 - 867 FIG00418058: hypothetical protein - none -
fig|6666666.230108.peg.582 CDS JH724260.1 1618198 1617446 -1 - 753 Transcriptional regulatory protein rprY - none -
fig|6666666.230108.peg.583 CDS JH724260.1 1618568 1618789 2 + 222 hypothetical protein - none -
fig|6666666.230108.peg.584 CDS JH724260.1 1621017 1618792 -3 - 2226 two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.585 CDS JH724260.1 1623238 1621154 -1 - 2085 FIG00411497: hypothetical protein - none -
fig|6666666.230108.peg.586 CDS JH724260.1 1626861 1623250 -3 - 3612 Alpha-mannosidase (EC 3.2.1.24) Mannose Metabolism
fig|6666666.230108.peg.587 CDS JH724260.1 1628080 1626902 -1 - 1179 putative alpha-1,6-mannanase - none -
fig|6666666.230108.peg.588 CDS JH724260.1 1629171 1628098 -3 - 1074 carbohydrate-binding protein - none -
fig|6666666.230108.peg.589 CDS JH724260.1 1631209 1629266 -1 - 1944 FIG00939684: hypothetical protein - none -
fig|6666666.230108.peg.590 CDS JH724260.1 1632156 1631326 -3 - 831 FIG00414252: hypothetical protein - none -
fig|6666666.230108.peg.591 CDS JH724260.1 1634117 1632231 -2 - 1887 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.592 CDS JH724260.1 1637256 1634170 -3 - 3087 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.593 CDS JH724260.1 1638628 1637435 -1 - 1194 FIG00414347: hypothetical protein - none -
fig|6666666.230108.peg.594 CDS JH724260.1 1639364 1638660 -2 - 705 FIG01093382: hypothetical protein - none -
fig|6666666.230108.peg.595 CDS JH724260.1 1639472 1639837 2 + 366 Maltodextrin glucosidase (EC 3.2.1.20) Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.596 CDS JH724260.1 1639844 1641277 2 + 1434 FIG00413844: hypothetical protein - none -
fig|6666666.230108.peg.597 CDS JH724260.1 1642217 1641348 -2 - 870 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.230108.peg.598 CDS JH724260.1 1642432 1642554 1 + 123 hypothetical protein - none -
fig|6666666.230108.peg.599 CDS JH724260.1 1642797 1645769 3 + 2973 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.230108.peg.600 CDS JH724260.1 1645775 1646677 2 + 903 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.230108.peg.601 CDS JH724260.1 1646715 1647293 3 + 579 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.230108.peg.602 CDS JH724260.1 1648325 1647387 -2 - 939 Quinolinate synthetase (EC 2.5.1.72) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.230108.peg.603 CDS JH724260.1 1648790 1649317 2 + 528 23S rRNA methyltransferase (EC 2.1.1.-) - none -
fig|6666666.230108.peg.604 CDS JH724260.1 1649619 1650581 3 + 963 Protein of unknown function DUF161 - none -
fig|6666666.230108.peg.605 CDS JH724260.1 1650711 1651451 3 + 741 FIG00413590: hypothetical protein - none -
fig|6666666.230108.peg.606 CDS JH724260.1 1652027 1651446 -2 - 582 FIG00896812: hypothetical protein - none -
fig|6666666.230108.peg.607 CDS JH724260.1 1652218 1654221 1 + 2004 FIG00898434: hypothetical protein - none -
fig|6666666.230108.peg.608 CDS JH724260.1 1654360 1655133 1 + 774 Fe-S OXIDOREDUCTASE (1.8.-.-) - none -
fig|6666666.230108.peg.609 CDS JH724260.1 1655144 1655653 2 + 510 FIG00403759: hypothetical protein - none -
fig|6666666.230108.peg.610 CDS JH724260.1 1656498 1655659 -3 - 840 DNA/RNA endonuclease G - none -
fig|6666666.230108.peg.611 CDS JH724260.1 1658188 1656506 -1 - 1683 Sulfate permease Cysteine Biosynthesis
fig|6666666.230108.peg.612 CDS JH724260.1 1658510 1659088 2 + 579 Rubrerythrin Oxidative stress;
Rubrerythrin
fig|6666666.230108.peg.613 CDS JH724260.1 1659245 1659385 2 + 141 hypothetical protein - none -
fig|6666666.230108.peg.614 CDS JH724260.1 1661565 1659382 -3 - 2184 FIG00412200: hypothetical protein - none -
fig|6666666.230108.peg.615 CDS JH724260.1 1663278 1661596 -3 - 1683 FIG00412221: hypothetical protein - none -
fig|6666666.230108.peg.616 CDS JH724260.1 1664934 1663363 -3 - 1572 L-aspartate oxidase (EC 1.4.3.16) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.230108.peg.617 CDS JH724260.1 1666930 1665011 -1 - 1920 FIG00409736: hypothetical protein - none -
fig|6666666.230108.peg.618 CDS JH724260.1 1667151 1667525 3 + 375 FIG00406980: hypothetical protein - none -
fig|6666666.230108.peg.619 CDS JH724260.1 1667559 1667951 3 + 393 FIG00413241: hypothetical protein - none -
fig|6666666.230108.peg.620 CDS JH724260.1 1668590 1667985 -2 - 606 hypothetical protein - none -
fig|6666666.230108.peg.621 CDS JH724260.1 1668793 1669539 1 + 747 Two-component system response regulator - none -
fig|6666666.230108.peg.622 CDS JH724260.1 1670904 1669693 -3 - 1212 putative outer membrane protein - none -
fig|6666666.230108.peg.623 CDS JH724260.1 1672217 1670901 -2 - 1317 FIG00407157: hypothetical protein - none -
fig|6666666.230108.peg.624 CDS JH724260.1 1672460 1673539 2 + 1080 FIG00410465: hypothetical protein - none -
fig|6666666.230108.peg.625 CDS JH724260.1 1673565 1673897 3 + 333 hypothetical protein - none -
fig|6666666.230108.peg.626 CDS JH724260.1 1674841 1673894 -1 - 948 FIG00403751: hypothetical protein - none -
fig|6666666.230108.peg.627 CDS JH724260.1 1675030 1676388 1 + 1359 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.230108.peg.628 CDS JH724260.1 1676423 1676845 2 + 423 hypothetical protein - none -
fig|6666666.230108.peg.629 CDS JH724260.1 1678071 1676854 -3 - 1218 peptidase M1, membrane alanine aminopeptidase - none -
fig|6666666.230108.peg.630 CDS JH724260.1 1678249 1679805 1 + 1557 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.230108.peg.631 CDS JH724260.1 1680814 1679903 -1 - 912 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.632 CDS JH724260.1 1680974 1682143 2 + 1170 Multidrug resistance protein - none -
fig|6666666.230108.peg.633 CDS JH724260.1 1682181 1685360 3 + 3180 RND efflux system, inner membrane transporter CmeB Multidrug Resistance Efflux Pumps
fig|6666666.230108.peg.634 CDS JH724260.1 1685390 1686796 2 + 1407 Outer membrane protein oprM - none -
fig|6666666.230108.peg.635 CDS JH724260.1 1688724 1687228 -3 - 1497 Acetyl-CoA hydrolase (EC 3.1.2.1) - none -
fig|6666666.230108.peg.636 CDS JH724260.1 1689178 1688798 -1 - 381 FIG00402837: hypothetical protein - none -
fig|6666666.230108.peg.637 CDS JH724260.1 1689573 1690946 3 + 1374 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.230108.peg.638 CDS JH724260.1 1691552 1691049 -2 - 504 FIG00410772: hypothetical protein - none -
fig|6666666.230108.peg.639 CDS JH724260.1 1691925 1692824 3 + 900 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) - none -
fig|6666666.230108.peg.640 CDS JH724260.1 1692907 1693782 1 + 876 Cell division protein FtsX Bacterial Cell Division
fig|6666666.230108.peg.641 CDS JH724260.1 1693866 1694105 3 + 240 FIG00936924: hypothetical protein - none -
fig|6666666.230108.peg.642 CDS JH724260.1 1694262 1695053 3 + 792 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.230108.peg.643 CDS JH724260.1 1695169 1695876 1 + 708 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
CBSS-350688.3.peg.1509;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.230108.peg.644 CDS JH724260.1 1695993 1697051 3 + 1059 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230108.peg.645 CDS JH724260.1 1697111 1697530 2 + 420 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.230108.peg.646 CDS JH724260.1 1697832 1699124 3 + 1293 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230108.peg.647 CDS JH724260.1 1700469 1699261 -3 - 1209 ATPase - none -
fig|6666666.230108.peg.648 CDS JH724260.1 1700874 1702397 3 + 1524 TPR-repeat-containing protein - none -
fig|6666666.230108.peg.649 CDS JH724260.1 1702940 1703917 2 + 978 hypothetical protein - none -
fig|6666666.230108.peg.650 CDS JH724260.1 1703988 1704911 3 + 924 DSBA thioredoxin domain protein - none -
fig|6666666.230108.peg.651 CDS JH724260.1 1705148 1705918 2 + 771 hypothetical protein - none -
fig|6666666.230108.peg.652 CDS JH724260.1 1705953 1708184 3 + 2232 TonB-dependent receptor, plug precursor - none -
fig|6666666.230108.peg.653 CDS JH724260.1 1710063 1708174 -3 - 1890 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.654 CDS JH724260.1 1711016 1710294 -2 - 723 FIG00409286: hypothetical protein - none -
fig|6666666.230108.peg.655 CDS JH724260.1 1711197 1711340 3 + 144 hypothetical protein - none -
fig|6666666.230108.peg.656 CDS JH724260.1 1711441 1711755 1 + 315 hypothetical protein - none -
fig|6666666.230108.peg.657 CDS JH724260.1 1711803 1712666 3 + 864 FIG00403097: hypothetical protein - none -
fig|6666666.230108.peg.658 CDS JH724260.1 1712853 1713341 3 + 489 Putative non-specific DNA-binding protein - none -
fig|6666666.230108.peg.659 CDS JH724260.1 1713322 1713447 1 + 126 hypothetical protein - none -
fig|6666666.230108.peg.660 CDS JH724260.1 1713500 1713940 2 + 441 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230108.peg.661 CDS JH724260.1 1714175 1717435 2 + 3261 hypothetical protein - none -
fig|6666666.230108.peg.662 CDS JH724260.1 1718097 1717420 -3 - 678 hypothetical protein - none -
fig|6666666.230108.peg.663 CDS JH724260.1 1718705 1720495 2 + 1791 Mobile element protein - none -
fig|6666666.230108.peg.664 CDS JH724260.1 1721075 1720947 -2 - 129 hypothetical protein - none -
fig|6666666.230108.peg.665 CDS JH724260.1 1721105 1721224 2 + 120 hypothetical protein - none -
fig|6666666.230108.peg.666 CDS JH724260.1 1722573 1723535 3 + 963 Mobile element protein - none -
fig|6666666.230108.peg.667 CDS JH724260.1 1723928 1724119 2 + 192 hypothetical protein - none -
fig|6666666.230108.peg.668 CDS JH724260.1 1724227 1724745 1 + 519 Mobile element protein - none -
fig|6666666.230108.peg.669 CDS JH724260.1 1725406 1725543 1 + 138 Mobile element protein - none -
fig|6666666.230108.peg.670 CDS JH724260.1 1726230 1727189 3 + 960 Mobile element protein - none -
fig|6666666.230108.peg.671 CDS JH724260.1 1727192 1727458 2 + 267 hypothetical protein - none -
fig|6666666.230108.peg.672 CDS JH724260.1 1728151 1729113 1 + 963 Mobile element protein - none -
fig|6666666.230108.peg.673 CDS JH724260.1 1729816 1730343 1 + 528 Mobile element protein - none -
fig|6666666.230108.peg.674 CDS JH724260.1 1730340 1730525 3 + 186 Mobile element protein - none -
fig|6666666.230108.peg.675 CDS JH724260.1 1730821 1731411 1 + 591 Lysine decarboxylase family - none -
fig|6666666.230108.peg.676 CDS JH724260.1 1731408 1732139 3 + 732 FIG00938392: hypothetical protein - none -
fig|6666666.230108.peg.677 CDS JH724260.1 1732144 1732896 1 + 753 uroporphyrinogen-III synthase HemD, putative - none -
fig|6666666.230108.peg.678 CDS JH724260.1 1733081 1733497 2 + 417 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.230108.peg.679 CDS JH724260.1 1733494 1733715 1 + 222 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.230108.peg.680 CDS JH724260.1 1733919 1734377 3 + 459 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.230108.peg.681 CDS JH724260.1 1734485 1735777 2 + 1293 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.230108.peg.682 CDS JH724260.1 1736226 1736378 3 + 153 hypothetical protein - none -
fig|6666666.230108.peg.683 CDS JH724260.1 1736417 1737220 2 + 804 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230108.peg.684 CDS JH724260.1 1737387 1737223 -3 - 165 hypothetical protein - none -
fig|6666666.230108.peg.685 CDS JH724260.1 1737395 1738627 2 + 1233 FIG00405395: hypothetical protein - none -
fig|6666666.230108.peg.686 CDS JH724260.1 1739338 1738706 -1 - 633 DNA-binding response regulator, LuxR family - none -
fig|6666666.230108.peg.687 CDS JH724260.1 1741134 1739335 -3 - 1800 sensor histidine kinase - none -
fig|6666666.230108.peg.688 CDS JH724260.1 1741546 1742442 1 + 897 FIG00414726: hypothetical protein - none -
fig|6666666.230108.peg.689 CDS JH724260.1 1743182 1742586 -2 - 597 Polysaccharide deacetylase - none -
fig|6666666.230108.peg.690 CDS JH724260.1 1746731 1743387 -2 - 3345 membrane protein, putative - none -
fig|6666666.230108.peg.691 CDS JH724260.1 1747150 1748421 1 + 1272 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.230108.peg.692 CDS JH724260.1 1750341 1749214 -3 - 1128 hypothetical protein - none -
fig|6666666.230108.peg.693 CDS JH724260.1 1750707 1750567 -3 - 141 hypothetical protein - none -
fig|6666666.230108.peg.694 CDS JH724260.1 1750759 1751982 1 + 1224 Tyrosine type site-specific recombinase - none -
fig|6666666.230108.peg.695 CDS JH724260.1 1752013 1753314 1 + 1302 transposase - none -
fig|6666666.230108.peg.696 CDS JH724260.1 1753713 1753399 -3 - 315 FIG00406484: hypothetical protein - none -
fig|6666666.230108.peg.697 CDS JH724260.1 1754003 1753710 -2 - 294 hypothetical protein - none -
fig|6666666.230108.peg.698 CDS JH724260.1 1754346 1754026 -3 - 321 hypothetical protein - none -
fig|6666666.230108.peg.699 CDS JH724260.1 1754951 1754562 -2 - 390 hypothetical protein - none -
fig|6666666.230108.peg.700 CDS JH724260.1 1756606 1755293 -1 - 1314 RteB, two-component system response regulator - none -
fig|6666666.230108.peg.701 CDS JH724260.1 1758908 1756581 -2 - 2328 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.702 CDS JH724260.1 1759688 1758933 -2 - 756 Fe3+ ABC transporter, ATP-binding protein - none -
fig|6666666.230108.peg.703 CDS JH724260.1 1760665 1759685 -1 - 981 Vitamin B12 ABC transporter, permease component BtuC Coenzyme B12 biosynthesis
fig|6666666.230108.peg.704 CDS JH724260.1 1761805 1760666 -1 - 1140 Vitamin B12 ABC transporter, B12-binding component BtuF Coenzyme B12 biosynthesis
fig|6666666.230108.peg.705 CDS JH724260.1 1763900 1761810 -2 - 2091 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.706 CDS JH724260.1 1764993 1763914 -3 - 1080 putative surface layer protein - none -
fig|6666666.230108.peg.707 CDS JH724260.1 1767127 1765079 -1 - 2049 putative cell wall biogenesis protein - none -
fig|6666666.230108.peg.708 CDS JH724260.1 1769031 1767136 -3 - 1896 putative cell surface protein - none -
fig|6666666.230108.peg.709 CDS JH724260.1 1770163 1769039 -1 - 1125 FIG00402688: hypothetical protein - none -
fig|6666666.230108.peg.710 CDS JH724260.1 1771259 1770471 -2 - 789 ThiF family protein, ubiquitin-activating enzyme - none -
fig|6666666.230108.peg.711 CDS JH724260.1 1771954 1771256 -1 - 699 hypothetical protein - none -
fig|6666666.230108.peg.712 CDS JH724260.1 1773044 1771959 -2 - 1086 hypothetical protein - none -
fig|6666666.230108.peg.713 CDS JH724260.1 1773306 1773085 -3 - 222 FIG00408893: hypothetical protein - none -
fig|6666666.230108.peg.714 CDS JH724260.1 1774236 1773310 -3 - 927 hypothetical protein - none -
fig|6666666.230108.peg.715 CDS JH724260.1 1774547 1774296 -2 - 252 hypothetical protein - none -
fig|6666666.230108.peg.716 CDS JH724260.1 1774873 1774556 -1 - 318 hypothetical protein - none -
fig|6666666.230108.peg.717 CDS JH724260.1 1775207 1774887 -2 - 321 FIG00411855: hypothetical protein - none -
fig|6666666.230108.peg.718 CDS JH724260.1 1775446 1775219 -1 - 228 hypothetical protein - none -
fig|6666666.230108.peg.719 CDS JH724260.1 1777784 1775721 -2 - 2064 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.230108.peg.720 CDS JH724260.1 1777743 1777874 3 + 132 hypothetical protein - none -
fig|6666666.230108.peg.721 CDS JH724260.1 1778191 1777931 -1 - 261 hypothetical protein - none -
fig|6666666.230108.peg.722 CDS JH724260.1 1780006 1778234 -1 - 1773 FIG00936597: hypothetical protein - none -
fig|6666666.230108.peg.723 CDS JH724260.1 1780112 1780264 2 + 153 hypothetical protein - none -
fig|6666666.230108.peg.724 CDS JH724260.1 1780413 1780249 -3 - 165 hypothetical protein - none -
fig|6666666.230108.peg.725 CDS JH724260.1 1780788 1781510 3 + 723 FIG00406576: hypothetical protein - none -
fig|6666666.230108.peg.726 CDS JH724260.1 1781507 1782580 2 + 1074 FIG00409689: hypothetical protein - none -
fig|6666666.230108.peg.727 CDS JH724260.1 1782982 1782692 -1 - 291 hypothetical protein - none -
fig|6666666.230108.peg.728 CDS JH724260.1 1783451 1783023 -2 - 429 hypothetical protein - none -
fig|6666666.230108.peg.729 CDS JH724260.1 1784321 1783551 -2 - 771 hypothetical plasmid protein - none -
fig|6666666.230108.peg.730 CDS JH724260.1 1784535 1784341 -3 - 195 hypothetical protein - none -
fig|6666666.230108.peg.731 CDS JH724260.1 1784825 1784547 -2 - 279 hypothetical protein - none -
fig|6666666.230108.peg.732 CDS JH724260.1 1785099 1784842 -3 - 258 hypothetical protein - none -
fig|6666666.230108.peg.733 CDS JH724260.1 1785373 1785116 -1 - 258 hypothetical protein - none -
fig|6666666.230108.peg.734 CDS JH724260.1 1787726 1785699 -2 - 2028 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.735 CDS JH724260.1 1789011 1787761 -3 - 1251 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.736 CDS JH724260.1 1789464 1789015 -3 - 450 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.737 CDS JH724260.1 1789914 1789768 -3 - 147 hypothetical protein - none -
fig|6666666.230108.peg.738 CDS JH724260.1 1790113 1790880 1 + 768 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.739 CDS JH724260.1 1790886 1791326 3 + 441 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.740 CDS JH724260.1 1791329 1792018 2 + 690 Conjugative transposon protein TraD Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.741 CDS JH724260.1 1792256 1792552 2 + 297 Conjugative transposon protein TraE Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.742 CDS JH724260.1 1792554 1792886 3 + 333 Conjugative transposon protein TraF Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.743 CDS JH724260.1 1792883 1795399 2 + 2517 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.744 CDS JH724260.1 1795412 1796461 2 + 1050 hypothetical protein - none -
fig|6666666.230108.peg.745 CDS JH724260.1 1796521 1797132 1 + 612 Conjugative transposon protein TraI Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.746 CDS JH724260.1 1797157 1798161 1 + 1005 Conjugative transposon protein TraJ Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.747 CDS JH724260.1 1798180 1798803 1 + 624 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.748 CDS JH724260.1 1798817 1799122 2 + 306 Conjugative transposon protein TraL Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.749 CDS JH724260.1 1799125 1800426 1 + 1302 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.750 CDS JH724260.1 1800471 1801451 3 + 981 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.751 CDS JH724260.1 1801448 1802023 2 + 576 Conjugative transposon protein TraO Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.752 CDS JH724260.1 1802032 1802613 1 + 582 Conjugative transposon protein TraQ Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.753 CDS JH724260.1 1802628 1802996 3 + 369 Lysozyme-related protein - none -
fig|6666666.230108.peg.754 CDS JH724260.1 1803005 1803127 2 + 123 Lysozyme-related protein - none -
fig|6666666.230108.peg.755 CDS JH724260.1 1803689 1803171 -2 - 519 hypothetical protein - none -
fig|6666666.230108.peg.756 CDS JH724260.1 1804692 1803700 -3 - 993 hypothetical protein - none -
fig|6666666.230108.peg.757 CDS JH724260.1 1804932 1804774 -3 - 159 hypothetical protein - none -
fig|6666666.230108.peg.758 CDS JH724260.1 1805984 1804962 -2 - 1023 FIG00896987: hypothetical protein - none -
fig|6666666.230108.peg.759 CDS JH724260.1 1806219 1806010 -3 - 210 hypothetical protein - none -
fig|6666666.230108.peg.760 CDS JH724260.1 1806572 1806225 -2 - 348 FIG00897967: hypothetical protein - none -
fig|6666666.230108.peg.761 CDS JH724260.1 1807146 1806646 -3 - 501 FIG00898764: hypothetical protein - none -
fig|6666666.230108.peg.762 CDS JH724260.1 1807420 1807175 -1 - 246 hypothetical protein - none -
fig|6666666.230108.peg.763 CDS JH724260.1 1807995 1807501 -3 - 495 Antirestriction protein ArdA - none -
fig|6666666.230108.peg.764 CDS JH724260.1 1808210 1808335 2 + 126 hypothetical protein - none -
fig|6666666.230108.peg.765 CDS JH724260.1 1811306 1808304 -2 - 3003 DNA methylase - none -
fig|6666666.230108.peg.766 CDS JH724260.1 1812333 1811386 -3 - 948 hypothetical protein - none -
fig|6666666.230108.peg.767 CDS JH724260.1 1812963 1814384 3 + 1422 sialic acid-specific 9-O-acetylesterase - none -
fig|6666666.230108.peg.768 CDS JH724260.1 1817061 1814527 -3 - 2535 FIG00412616: hypothetical protein - none -
fig|6666666.230108.peg.769 CDS JH724260.1 1817401 1818654 1 + 1254 N-acylglucosamine 2-epimerase (EC 5.1.3.8) Sialic Acid Metabolism
fig|6666666.230108.peg.770 CDS JH724260.1 1818651 1818866 3 + 216 FIG00416521: hypothetical protein - none -
fig|6666666.230108.peg.771 CDS JH724260.1 1819101 1821512 3 + 2412 Alpha-xylosidase (EC 3.2.1.-) Xylose utilization
fig|6666666.230108.peg.772 CDS JH724260.1 1821661 1823025 1 + 1365 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.773 CDS JH724260.1 1823003 1824850 2 + 1848 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.774 CDS JH724260.1 1824862 1826541 1 + 1680 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.775 CDS JH724260.1 1826569 1827969 1 + 1401 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.230108.peg.776 CDS JH724260.1 1830336 1828081 -3 - 2256 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.777 CDS JH724260.1 1831965 1830355 -3 - 1611 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.778 CDS JH724260.1 1831993 1832115 1 + 123 hypothetical protein - none -
fig|6666666.230108.peg.779 CDS JH724260.1 1836027 1832119 -3 - 3909 DNA-binding response regulator, AraC family - none -
fig|6666666.230108.peg.780 CDS JH724260.1 1836205 1838748 1 + 2544 Alpha-xylosidase (EC 3.2.1.-) Xylose utilization
fig|6666666.230108.peg.781 CDS JH724260.1 1838962 1842129 1 + 3168 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.782 CDS JH724260.1 1842157 1843845 1 + 1689 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.783 CDS JH724260.1 1844151 1845248 3 + 1098 N-acylglucosamine 2-epimerase (EC 5.1.3.8) Sialic Acid Metabolism
fig|6666666.230108.peg.784 CDS JH724260.1 1845254 1847779 2 + 2526 FIG00412616: hypothetical protein - none -
fig|6666666.230108.peg.785 CDS JH724260.1 1847772 1849664 3 + 1893 FIG00402961: hypothetical protein - none -
fig|6666666.230108.peg.786 CDS JH724260.1 1850545 1849739 -1 - 807 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.230108.peg.787 CDS JH724260.1 1851482 1850556 -2 - 927 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.230108.peg.788 CDS JH724260.1 1852240 1851560 -1 - 681 putative peptidase - none -
fig|6666666.230108.peg.789 CDS JH724260.1 1852882 1852403 -1 - 480 probable integral membrane protein Cj0341c - none -
fig|6666666.230108.peg.790 CDS JH724260.1 1853862 1852867 -3 - 996 FIG00936973: hypothetical protein - none -
fig|6666666.230108.peg.791 CDS JH724260.1 1855137 1853863 -3 - 1275 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.230108.peg.792 CDS JH724260.1 1857565 1855328 -1 - 2238 Dipeptidyl peptidase IV - none -
fig|6666666.230108.peg.793 CDS JH724260.1 1859073 1857574 -3 - 1500 Methyltransferase (EC 2.1.1.-) - none -
fig|6666666.230108.peg.794 CDS JH724260.1 1860112 1859213 -1 - 900 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.230108.peg.795 CDS JH724260.1 1860332 1861279 2 + 948 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.230108.peg.796 CDS JH724260.1 1861819 1861343 -1 - 477 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230108.peg.797 CDS JH724260.1 1864129 1861985 -1 - 2145 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.230108.peg.798 CDS JH724260.1 1864221 1865294 3 + 1074 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.230108.peg.799 CDS JH724260.1 1865356 1866363 1 + 1008 NAD-dependent epimerase/dehydratase family protein CBSS-296591.1.peg.2330
fig|6666666.230108.peg.800 CDS JH724260.1 1866354 1867319 3 + 966 FIG00403590: hypothetical protein - none -
fig|6666666.230108.peg.801 CDS JH724260.1 1867441 1867316 -1 - 126 hypothetical protein - none -
fig|6666666.230108.peg.802 CDS JH724260.1 1867607 1867452 -2 - 156 hypothetical protein - none -
fig|6666666.230108.peg.803 CDS JH724260.1 1868780 1867800 -2 - 981 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.230108.peg.804 CDS JH724260.1 1868826 1870142 3 + 1317 Collagenase precursor (EC 3.4.-.-) - none -
fig|6666666.230108.peg.805 CDS JH724260.1 1870198 1870590 1 + 393 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.230108.peg.806 CDS JH724260.1 1870689 1871720 3 + 1032 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.230108.peg.807 CDS JH724260.1 1872540 1871740 -3 - 801 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.230108.peg.808 CDS JH724260.1 1872969 1873592 3 + 624 FIG00403496: hypothetical protein - none -
fig|6666666.230108.peg.809 CDS JH724260.1 1873616 1874572 2 + 957 FIG00406595: hypothetical protein - none -
fig|6666666.230108.peg.810 CDS JH724260.1 1874618 1875586 2 + 969 FIG00405468: hypothetical protein - none -
fig|6666666.230108.peg.811 CDS JH724260.1 1876055 1875690 -2 - 366 hypothetical protein - none -
fig|6666666.230108.peg.812 CDS JH724260.1 1876059 1876598 3 + 540 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.813 CDS JH724260.1 1877492 1876737 -2 - 756 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.230108.peg.814 CDS JH724260.1 1879472 1877526 -2 - 1947 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.230108.peg.815 CDS JH724260.1 1880207 1879509 -2 - 699 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.230108.peg.816 CDS JH724260.1 1881233 1880370 -2 - 864 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.817 CDS JH724260.1 1881378 1881980 3 + 603 Membrane-associated phospholipid phosphatase - none -
fig|6666666.230108.peg.818 CDS JH724260.1 1883679 1882063 -3 - 1617 Carboxy-terminal processing protease - none -
fig|6666666.230108.peg.819 CDS JH724260.1 1884166 1883708 -1 - 459 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.230108.peg.820 CDS JH724260.1 1886097 1884163 -3 - 1935 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.230108.peg.821 CDS JH724260.1 1887351 1886215 -3 - 1137 FIG00935709: hypothetical protein - none -
fig|6666666.230108.peg.822 CDS JH724260.1 1888536 1887502 -3 - 1035 Sodium-calcium exchanger - none -
fig|6666666.230108.peg.823 CDS JH724260.1 1888645 1890339 1 + 1695 Mechanosensitive ion channel family protein - none -
fig|6666666.230108.peg.824 CDS JH724260.1 1891749 1890460 -3 - 1290 FIG00407002: hypothetical protein - none -
fig|6666666.230108.peg.825 CDS JH724260.1 1892861 1891932 -2 - 930 Tartrate-resistant acid phosphatase type 5 precursor (EC 3.1.3.2) - none -
fig|6666666.230108.peg.826 CDS JH724260.1 1895690 1892922 -2 - 2769 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.827 CDS JH724260.1 1897211 1895964 -2 - 1248 SAM-dependent methyltransferases - none -
fig|6666666.230108.peg.828 CDS JH724260.1 1897232 1897432 2 + 201 hypothetical protein - none -
fig|6666666.230108.peg.829 CDS JH724260.1 1898189 1897422 -2 - 768 D-alanyl-D-alanine dipeptidase (EC 3.4.13.22) - none -
fig|6666666.230108.peg.830 CDS JH724260.1 1899471 1898191 -3 - 1281 FIG00414220: hypothetical protein - none -
fig|6666666.230108.peg.831 CDS JH724260.1 1900694 1899480 -2 - 1215 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) @ Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Na+ translocating decarboxylases and related biotin-dependent enzymes;
Propionyl-CoA to Succinyl-CoA Module;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230108.peg.832 CDS JH724260.1 1901134 1900697 -1 - 438 hypothetical protein - none -
fig|6666666.230108.peg.833 CDS JH724260.1 1901380 1901231 -1 - 150 hypothetical protein - none -
fig|6666666.230108.peg.834 CDS JH724260.1 1902244 1901783 -1 - 462 Putative two-component system response regulator, no kinase domain - none -
fig|6666666.230108.peg.835 CDS JH724260.1 1903081 1902665 -1 - 417 hypothetical protein - none -
fig|6666666.230108.peg.836 CDS JH724260.1 1903655 1903344 -2 - 312 conserved hypothetical protein, putative membrane protein - none -
fig|6666666.230108.peg.837 CDS JH724260.1 1904129 1903665 -2 - 465 Transcriptional regulator, AsnC family - none -
fig|6666666.230108.peg.838 CDS JH724260.1 1905205 1904360 -1 - 846 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.230108.peg.839 CDS JH724260.1 1905839 1905246 -2 - 594 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.230108.peg.840 CDS JH724260.1 1905989 1906738 2 + 750 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.230108.peg.841 CDS JH724260.1 1907750 1907004 -2 - 747 Glycosyl transferase, group 2 family protein - none -
fig|6666666.230108.peg.842 CDS JH724260.1 1909008 1907743 -3 - 1266 Glycosyl transferase, group 1 family protein - none -
fig|6666666.230108.peg.843 CDS JH724260.1 1910065 1909049 -1 - 1017 protein containing nucleotide-diphospho-sugar transferase domain - none -
fig|6666666.230108.peg.844 CDS JH724260.1 1911013 1910081 -1 - 933 licD family protein - none -
fig|6666666.230108.peg.845 CDS JH724260.1 1911926 1911015 -2 - 912 FIG00417891: hypothetical protein - none -
fig|6666666.230108.peg.846 CDS JH724260.1 1913368 1911923 -1 - 1446 Lipopolysaccharide biosynthesis protein WzxC - none -
fig|6666666.230108.peg.847 CDS JH724260.1 1915503 1913461 -3 - 2043 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.230108.peg.848 CDS JH724260.1 1915664 1916521 2 + 858 hypothetical protein - none -
fig|6666666.230108.peg.849 CDS JH724260.1 1917170 1916730 -2 - 441 FIG00414833: hypothetical protein - none -
fig|6666666.230108.peg.850 CDS JH724260.1 1917417 1918325 3 + 909 FIG00418272: hypothetical protein - none -
fig|6666666.230108.peg.851 CDS JH724260.1 1918391 1919149 2 + 759 Two-component system response regulator - none -
fig|6666666.230108.peg.852 CDS JH724260.1 1919160 1920179 3 + 1020 two-component sensor kinase - none -
fig|6666666.230108.peg.853 CDS JH724260.1 1921098 1920166 -3 - 933 FIG00413160: hypothetical protein - none -
fig|6666666.230108.peg.854 CDS JH724260.1 1921267 1923327 1 + 2061 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.230108.peg.855 CDS JH724260.1 1924848 1923394 -3 - 1455 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.230108.peg.856 CDS JH724260.1 1926043 1924970 -1 - 1074 Thiol:disulfide interchange protein - none -
fig|6666666.230108.peg.857 CDS JH724260.1 1927849 1926155 -1 - 1695 Immunoreactive 53 kDa antigen PG123 - none -
fig|6666666.230108.peg.858 CDS JH724260.1 1928939 1927986 -2 - 954 Phage integrase - none -
fig|6666666.230108.peg.859 CDS JH724260.1 1929058 1929477 1 + 420 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.230108.peg.860 CDS JH724260.1 1929498 1930955 3 + 1458 Pyruvate kinase (EC 2.7.1.40) Entner-Doudoroff Pathway;
Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230108.peg.861 CDS JH724260.1 1931074 1931703 1 + 630 O-methyltransferase family protein [C1] - none -
fig|6666666.230108.peg.862 CDS JH724260.1 1932947 1931712 -2 - 1236 Lipoprotein releasing system transmembrane protein LolC Lipoprotein sorting system
fig|6666666.230108.peg.863 CDS JH724260.1 1933279 1932947 -1 - 333 Ribosome-binding factor A CBSS-138119.3.peg.2719;
CBSS-350688.3.peg.1509;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.230108.peg.864 CDS JH724260.1 1933567 1933442 -1 - 126 hypothetical protein - none -
fig|6666666.230108.peg.865 CDS JH724260.1 1936483 1933973 -1 - 2511 FIG00896840: hypothetical protein - none -
fig|6666666.230108.peg.866 CDS JH724260.1 1936752 1937432 3 + 681 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.230108.peg.867 CDS JH724260.1 1937457 1937948 3 + 492 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230108.peg.868 CDS JH724260.1 1939739 1938045 -2 - 1695 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.230108.peg.869 CDS JH724260.1 1940340 1939765 -3 - 576 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.230108.peg.870 CDS JH724260.1 1942928 1940517 -2 - 2412 putative TonB-dependent receptor - none -
fig|6666666.230108.peg.871 CDS JH724260.1 1943422 1942985 -1 - 438 FIG00416879: hypothetical protein - none -
fig|6666666.230108.peg.872 CDS JH724260.1 1944323 1943487 -2 - 837 FIG00415662: hypothetical protein - none -
fig|6666666.230108.peg.873 CDS JH724260.1 1944331 1944447 1 + 117 hypothetical protein - none -
fig|6666666.230108.peg.874 CDS JH724260.1 1944736 1944467 -1 - 270 SSU ribosomal protein S15p (S13e) CBSS-350688.3.peg.1509;
Ribosome SSU bacterial
fig|6666666.230108.peg.875 CDS JH724260.1 1944895 1946694 1 + 1800 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.230108.peg.876 CDS JH724260.1 1947315 1946785 -3 - 531 putative NADH dehydrogenase/NAD(P)H nitroreductase - none -
fig|6666666.230108.peg.877 CDS JH724260.1 1947326 1947496 2 + 171 hypothetical protein - none -
fig|6666666.230108.peg.878 CDS JH724260.1 1949177 1947570 -2 - 1608 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) Pyruvate metabolism I: anaplerotic reactions, PEP;
Serine-glyoxylate cycle
fig|6666666.230108.peg.879 CDS JH724260.1 1951160 1950072 -2 - 1089 FIG00416332: hypothetical protein - none -
fig|6666666.230108.peg.880 CDS JH724260.1 1952561 1951173 -2 - 1389 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) - none -
fig|6666666.230108.peg.881 CDS JH724260.1 1952813 1952565 -2 - 249 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230108.peg.882 CDS JH724260.1 1954324 1952816 -1 - 1509 D-alanine--poly(phosphoribitol) ligase subunit 1 (EC 6.1.1.13) - none -
fig|6666666.230108.peg.883 CDS JH724260.1 1956308 1954626 -2 - 1683 FIG00416872: hypothetical protein - none -
fig|6666666.230108.peg.884 CDS JH724260.1 1959657 1956340 -3 - 3318 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.885 CDS JH724260.1 1959986 1959819 -2 - 168 FIG00418218: hypothetical protein - none -
fig|6666666.230108.peg.886 CDS JH724260.1 1961354 1960350 -2 - 1005 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) - none -
fig|6666666.230108.peg.887 CDS JH724260.1 1963301 1961454 -2 - 1848 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) - none -
fig|6666666.230108.peg.888 CDS JH724260.1 1963349 1963462 2 + 114 hypothetical protein - none -
fig|6666666.230108.peg.889 CDS JH724260.1 1963774 1963634 -1 - 141 hypothetical protein - none -
fig|6666666.230108.peg.890 CDS JH724260.1 1966335 1964350 -3 - 1986 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.891 CDS JH724260.1 1969704 1966360 -3 - 3345 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.892 CDS JH724260.1 1970921 1970484 -2 - 438 hypothetical protein - none -
fig|6666666.230108.peg.893 CDS JH724260.1 1972734 1971247 -3 - 1488 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.230108.peg.894 CDS JH724260.1 1974383 1972731 -2 - 1653 hypothetical protein - none -
fig|6666666.230108.peg.895 CDS JH724260.1 1974973 1974785 -1 - 189 hypothetical protein - none -
fig|6666666.230108.peg.896 CDS JH724260.1 1974959 1977283 2 + 2325 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230108.peg.897 CDS JH724260.1 1977328 1978317 1 + 990 Hypothetical glycoside hydrolase, family 43, similar to arabinosidase L-Arabinose utilization
fig|6666666.230108.peg.898 CDS JH724260.1 1978340 1979527 2 + 1188 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230108.peg.899 CDS JH724260.1 1979572 1981842 1 + 2271 glycoside hydrolase, family 43 - none -
fig|6666666.230108.peg.900 CDS JH724260.1 1981950 1983395 3 + 1446 Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99) L-Arabinose utilization
fig|6666666.230108.peg.901 CDS JH724260.1 1985542 1983536 -1 - 2007 Alpha-glucuronidase (EC 3.2.1.139) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230108.peg.902 CDS JH724260.1 1986540 1985563 -3 - 978 Xylosidase/arabinosidase - none -
fig|6666666.230108.peg.903 CDS JH724260.1 1987678 1986554 -1 - 1125 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230108.peg.904 CDS JH724260.1 1989263 1987851 -2 - 1413 Xyloside transporter XynT Xylose utilization
fig|6666666.230108.peg.905 CDS JH724260.1 1991074 1989374 -1 - 1701 Sialic acid-specific 9-O-acetylesterase - none -
fig|6666666.230108.peg.906 CDS JH724260.1 1992814 1991096 -1 - 1719 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.907 CDS JH724260.1 1993902 1993180 -3 - 723 transposase - none -
fig|6666666.230108.peg.908 CDS JH724260.1 1994316 1998395 3 + 4080 two-component system sensor histidine kinase/response - none -
fig|6666666.230108.peg.909 CDS JH724260.1 2001561 1998565 -3 - 2997 Protein-export membrane protein SecD (TC 3.A.5.1.1) / Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832;
CBSS-211586.1.peg.2832
fig|6666666.230108.peg.910 CDS JH724260.1 2003690 2001645 -2 - 2046 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.230108.peg.911 CDS JH724260.1 2004865 2003765 -1 - 1101 AP endonuclease domain protein - none -
fig|6666666.230108.peg.912 CDS JH724260.1 2005848 2004958 -3 - 891 GlpG protein (membrane protein of glp regulon) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.230108.peg.913 CDS JH724260.1 2006512 2005829 -1 - 684 GlpG protein (membrane protein of glp regulon) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.230108.peg.914 CDS JH724260.1 2006551 2006718 1 + 168 FIG00416267: hypothetical protein - none -
fig|6666666.230108.peg.915 CDS JH724260.1 2006864 2007025 2 + 162 DNA-binding protein HU-beta DNA structural proteins, bacterial
fig|6666666.230108.peg.916 CDS JH724260.1 2007181 2008998 1 + 1818 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.230108.peg.917 CDS JH724260.1 2011542 2009140 -3 - 2403 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.230108.peg.918 CDS JH724260.1 2013319 2011688 -1 - 1632 putative TonB-dependent receptor - none -
fig|6666666.230108.peg.919 CDS JH724260.1 2016199 2013335 -1 - 2865 TPR-domain containing protein - none -
fig|6666666.230108.peg.920 CDS JH724260.1 2017023 2016484 -3 - 540 Nudix hydrolase family protein - none -
fig|6666666.230108.peg.921 CDS JH724260.1 2017130 2017621 2 + 492 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.230108.peg.922 CDS JH724260.1 2018172 2017693 -3 - 480 FIG00413911: hypothetical protein - none -
fig|6666666.230108.peg.923 CDS JH724260.1 2018801 2020381 2 + 1581 Mobile element protein - none -
fig|6666666.230108.peg.924 CDS JH724260.1 2020368 2021150 3 + 783 Mobile element protein - none -
fig|6666666.230108.peg.925 CDS JH724260.1 2022209 2021358 -2 - 852 FIG00897497: hypothetical protein - none -
fig|6666666.230108.peg.926 CDS JH724260.1 2022547 2022425 -1 - 123 hypothetical protein - none -
fig|6666666.230108.peg.927 CDS JH724260.1 2023771 2022638 -1 - 1134 Modification methylase EcoRI (EC 2.1.1.72) - none -
fig|6666666.230108.peg.928 CDS JH724260.1 2023976 2023776 -2 - 201 transcriptional regulator, putative - none -
fig|6666666.230108.peg.929 CDS JH724260.1 2026367 2024115 -2 - 2253 hypothetical protein - none -
fig|6666666.230108.peg.930 CDS JH724260.1 2027328 2026378 -3 - 951 COG0457: FOG: TPR repeat - none -
fig|6666666.230108.peg.931 CDS JH724260.1 2027795 2028397 2 + 603 putative DNA-binding protein - none -
fig|6666666.230108.peg.932 CDS JH724260.1 2028639 2029106 3 + 468 hypothetical protein - none -
fig|6666666.230108.peg.933 CDS JH724260.1 2029116 2029913 3 + 798 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.230108.peg.934 CDS JH724260.1 2030091 2029933 -3 - 159 hypothetical protein - none -
fig|6666666.230108.peg.935 CDS JH724260.1 2030065 2030649 1 + 585 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
CBSS-216591.1.peg.168
fig|6666666.230108.peg.936 CDS JH724260.1 2031256 2030651 -1 - 606 hypothetical protein - none -
fig|6666666.230108.peg.937 CDS JH724260.1 2031517 2032581 1 + 1065 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.230108.peg.938 CDS JH724260.1 2032690 2034456 1 + 1767 Putative carboxy-terminal processing protease (EC 3.4.21.102) - none -
fig|6666666.230108.peg.939 CDS JH724260.1 2034566 2036008 2 + 1443 FIG00415875: hypothetical protein - none -
fig|6666666.230108.peg.940 CDS JH724260.1 2036153 2038963 2 + 2811 FIG00415464: hypothetical protein - none -
fig|6666666.230108.peg.941 CDS JH724260.1 2039131 2041422 1 + 2292 Periplasmic beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.942 CDS JH724260.1 2041862 2044864 2 + 3003 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.943 CDS JH724260.1 2044884 2046404 3 + 1521 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.944 CDS JH724260.1 2046427 2047263 1 + 837 FIG00473187: hypothetical protein - none -
fig|6666666.230108.peg.945 CDS JH724260.1 2047355 2048929 2 + 1575 FIG00908315: hypothetical protein - none -
fig|6666666.230108.peg.946 CDS JH724260.1 2048940 2050256 3 + 1317 FIG00908315: hypothetical protein - none -
fig|6666666.230108.peg.947 CDS JH724260.1 2050312 2051163 1 + 852 endonuclease/exonuclease/phosphatase family protein - none -
fig|6666666.230108.peg.948 CDS JH724260.1 2051386 2052960 1 + 1575 Mucin-desulfating sulfatase - none -
fig|6666666.230108.peg.949 CDS JH724260.1 2053016 2054743 2 + 1728 Arabinan endo-1,5-alpha-L-arabinosidase A - none -
fig|6666666.230108.peg.950 CDS JH724260.1 2054752 2055522 1 + 771 FIG00653406: hypothetical protein - none -
fig|6666666.230108.peg.951 CDS JH724260.1 2055522 2056520 3 + 999 putative secreted protein - none -
fig|6666666.230108.peg.952 CDS JH724260.1 2057441 2056527 -2 - 915 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230108.peg.953 CDS JH724260.1 2059319 2057454 -2 - 1866 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.230108.peg.954 CDS JH724260.1 2059927 2059418 -1 - 510 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.230108.peg.955 CDS JH724260.1 2060424 2060044 -3 - 381 Glycine cleavage system H protein CBSS-315749.4.peg.3658;
Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.230108.peg.956 CDS JH724260.1 2061155 2060493 -2 - 663 FIG00937061: hypothetical protein - none -
fig|6666666.230108.peg.957 CDS JH724260.1 2062739 2061249 -2 - 1491 RNA polymerase sigma-54 factor RpoN Transcription initiation, bacterial sigma factors
fig|6666666.230108.peg.958 CDS JH724260.1 2063067 2064440 3 + 1374 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-)
fig|6666666.230108.peg.959 CDS JH724260.1 2066047 2064542 -1 - 1506 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.960 CDS JH724260.1 2067763 2066090 -1 - 1674 Uridine kinase (EC 2.7.1.48) - none -
fig|6666666.230108.peg.961 CDS JH724260.1 2067847 2069544 1 + 1698 Sodium-dependent phosphate transporter NhaA, NhaD and Sodium-dependent phosphate transporters;
Phosphate metabolism
fig|6666666.230108.peg.962 CDS JH724260.1 2069702 2069541 -2 - 162 Rubredoxin Rubrerythrin
fig|6666666.230108.peg.963 CDS JH724260.1 2069810 2070976 2 + 1167 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.964 CDS JH724260.1 2071067 2073751 2 + 2685 Calcium-transporting ATPase - none -
fig|6666666.230108.peg.965 CDS JH724260.1 2073751 2074374 1 + 624 Haloacid dehalogenase-like hydrolase - none -
fig|6666666.230108.peg.966 CDS JH724260.1 2074358 2075299 2 + 942 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) CBSS-350688.3.peg.1509;
CBSS-350688.3.peg.1509;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.230108.peg.967 CDS JH724260.1 2075522 2076007 2 + 486 FIG00418137: hypothetical protein - none -
fig|6666666.230108.peg.968 CDS JH724260.1 2076212 2076979 2 + 768 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.230108.peg.969 CDS JH724260.1 2076976 2077644 1 + 669 FIG00403233: hypothetical protein - none -
fig|6666666.230108.peg.970 CDS JH724260.1 2077668 2078273 3 + 606 FIG00403233: hypothetical protein - none -
fig|6666666.230108.peg.971 CDS JH724260.1 2078289 2078930 3 + 642 FIG00403233: hypothetical protein - none -
fig|6666666.230108.peg.972 CDS JH724260.1 2078998 2079177 1 + 180 Transcriptional regulator - none -
fig|6666666.230108.peg.973 CDS JH724260.1 2079865 2079440 -1 - 426 Sulfur acceptor protein SufE for iron-sulfur cluster assembly Iron-sulfur cluster assembly
fig|6666666.230108.peg.974 CDS JH724260.1 2080921 2079908 -1 - 1014 Aminopeptidase Y (Arg, Lys, Leu preference) (EC 3.4.11.15) Aminopeptidases (EC 3.4.11.-)
fig|6666666.230108.peg.975 CDS JH724260.1 2081856 2080918 -3 - 939 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230108.peg.976 CDS JH724260.1 2082114 2083034 3 + 921 phosphotransbutyrylase (EC 2.3.1.19) - none -
fig|6666666.230108.peg.977 CDS JH724260.1 2083079 2084161 2 + 1083 Butyrate kinase (EC 2.7.2.7) - none -
fig|6666666.230108.peg.978 CDS JH724260.1 2085032 2084316 -2 - 717 Putative isomerase - none -
fig|6666666.230108.peg.979 CDS JH724260.1 2086244 2085066 -2 - 1179 Putative isomerase - none -
fig|6666666.230108.peg.980 CDS JH724260.1 2089408 2086265 -1 - 3144 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.981 CDS JH724260.1 2090083 2089481 -1 - 603 putative surface protein - none -
fig|6666666.230108.peg.982 CDS JH724260.1 2090337 2090080 -3 - 258 FIG00407176: hypothetical protein - none -
fig|6666666.230108.peg.983 CDS JH724260.1 2093618 2090460 -2 - 3159 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.984 CDS JH724260.1 2095754 2093772 -2 - 1983 Putative isomerase - none -
fig|6666666.230108.peg.985 CDS JH724260.1 2097443 2095908 -2 - 1536 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.986 CDS JH724260.1 2100549 2097472 -3 - 3078 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.987 CDS JH724260.1 2103220 2101577 -1 - 1644 FIG00404818: hypothetical protein - none -
fig|6666666.230108.peg.988 CDS JH724260.1 2103297 2103905 3 + 609 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.230108.peg.989 CDS JH724260.1 2104838 2103912 -2 - 927 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.230108.peg.990 CDS JH724260.1 2105128 2106621 1 + 1494 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.230108.peg.991 CDS JH724260.1 2106734 2107315 2 + 582 FIG00937271: hypothetical protein - none -
fig|6666666.230108.peg.992 CDS JH724260.1 2109408 2107447 -3 - 1962 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.230108.peg.993 CDS JH724260.1 2109868 2109614 -1 - 255 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.230108.peg.994 CDS JH724260.1 2110285 2110124 -1 - 162 hypothetical protein - none -
fig|6666666.230108.peg.995 CDS JH724260.1 2110270 2110998 1 + 729 DNA recombination and repair protein RecO DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.230108.peg.996 CDS JH724260.1 2111763 2111314 -3 - 450 Transamidase GatB domain protein Macromolecular synthesis operon
fig|6666666.230108.peg.997 CDS JH724260.1 2113146 2111833 -3 - 1314 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.230108.peg.998 CDS JH724260.1 2114613 2113180 -3 - 1434 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.230108.peg.999 CDS JH724260.1 2115434 2114697 -2 - 738 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.230108.peg.1000 CDS JH724260.1 2116872 2115427 -3 - 1446 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.230108.peg.1001 CDS JH724260.1 2118216 2116942 -3 - 1275 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.230108.peg.1002 CDS JH724260.1 2119581 2118265 -3 - 1317 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.230108.peg.1003 CDS JH724260.1 2121004 2119673 -1 - 1332 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.230108.peg.1004 CDS JH724260.1 2122371 2121103 -3 - 1269 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.230108.peg.1005 CDS JH724260.1 2123942 2122494 -2 - 1449 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.230108.peg.1006 CDS JH724260.1 2126126 2123988 -2 - 2139 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.230108.peg.1007 CDS JH724260.1 2126564 2126214 -2 - 351 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.230108.peg.1008 CDS JH724260.1 2127494 2126574 -2 - 921 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.230108.peg.1009 CDS JH724260.1 2127981 2127505 -3 - 477 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.230108.peg.1010 CDS JH724260.1 2129966 2128503 -2 - 1464 FIG00937589: hypothetical protein - none -
fig|6666666.230108.peg.1011 CDS JH724260.1 2130596 2130093 -2 - 504 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.1012 CDS JH724260.1 2131476 2130973 -3 - 504 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.1013 CDS JH724260.1 2131665 2132510 3 + 846 Hemolysin A - none -
fig|6666666.230108.peg.1014 CDS JH724260.1 2132554 2133531 1 + 978 Hemolysin A - none -
fig|6666666.230108.peg.1015 CDS JH724260.1 2134885 2133560 -1 - 1326 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.230108.peg.1016 CDS JH724260.1 2135098 2135535 1 + 438 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.230108.peg.1017 CDS JH724260.1 2135612 2137432 2 + 1821 FIG00898077: hypothetical protein - none -
fig|6666666.230108.peg.1018 CDS JH724260.1 2137410 2137997 3 + 588 FIG00406555: hypothetical protein - none -
fig|6666666.230108.peg.1019 CDS JH724260.1 2138047 2139348 1 + 1302 TolA protein Ton and Tol transport systems
fig|6666666.230108.peg.1020 CDS JH724260.1 2140426 2139356 -1 - 1071 Acetylornithine deacetylase (EC 3.5.1.16) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230108.peg.1021 CDS JH724260.1 2141140 2140517 -1 - 624 FIG00414346: hypothetical protein - none -
fig|6666666.230108.peg.1022 CDS JH724260.1 2141352 2143157 3 + 1806 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) - none -
fig|6666666.230108.peg.1023 CDS JH724260.1 2143546 2143659 1 + 114 hypothetical protein - none -
fig|6666666.230108.peg.1024 CDS JH724260.1 2144098 2147172 1 + 3075 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.1025 CDS JH724260.1 2147188 2148789 1 + 1602 hypothetical protein - none -
fig|6666666.230108.peg.1026 CDS JH724260.1 2149214 2151664 2 + 2451 glycosyl hydrolase, family 9 - none -
fig|6666666.230108.peg.1027 CDS JH724260.1 2151676 2152902 1 + 1227 N-acetylglucosamine related transporter, NagX - none -
fig|6666666.230108.peg.1028 CDS JH724260.1 2152908 2154311 3 + 1404 FIG00897321: hypothetical protein - none -
fig|6666666.230108.peg.1029 CDS JH724260.1 2154308 2155060 2 + 753 FIG00407210: hypothetical protein - none -
fig|6666666.230108.peg.1030 CDS JH724260.1 2155175 2156290 2 + 1116 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.230108.peg.1031 CDS JH724260.1 2156371 2156505 1 + 135 hypothetical protein - none -
fig|6666666.230108.peg.1032 CDS JH724260.1 2156525 2156992 2 + 468 FIG00937621: hypothetical protein - none -
fig|6666666.230108.peg.1033 CDS JH724260.1 2157027 2158322 3 + 1296 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230108.peg.1034 CDS JH724260.1 2158472 2161003 2 + 2532 putative TonB-dependent receptor - none -
fig|6666666.230108.peg.1035 CDS JH724260.1 2162966 2161017 -2 - 1950 Serine/threonine protein kinase related protein - none -
fig|6666666.230108.peg.1036 CDS JH724260.1 2164382 2163039 -2 - 1344 Periplasmic beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.1037 CDS JH724260.1 2165239 2164382 -1 - 858 endonuclease/exonuclease/phosphatase family protein - none -
fig|6666666.230108.peg.1038 CDS JH724260.1 2167641 2165263 -3 - 2379 Periplasmic beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.1039 CDS JH724260.1 2169158 2167692 -2 - 1467 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1040 CDS JH724260.1 2172252 2169187 -3 - 3066 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.1041 CDS JH724260.1 2174292 2172769 -3 - 1524 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1042 CDS JH724260.1 2177374 2174336 -1 - 3039 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1043 CDS JH724260.1 2180271 2177443 -3 - 2829 hypothetical protein - none -
fig|6666666.230108.peg.1044 CDS JH724260.1 2181631 2180582 -1 - 1050 Carboxyl-terminal protease-related protein - none -
fig|6666666.230108.peg.1045 CDS JH724260.1 2182497 2181643 -3 - 855 FIG00415187: hypothetical protein - none -
fig|6666666.230108.peg.1046 CDS JH724260.1 2185220 2182539 -2 - 2682 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.230108.peg.1047 CDS JH724260.1 2185513 2185358 -1 - 156 hypothetical protein - none -
fig|6666666.230108.peg.1048 CDS JH724260.1 2188500 2185642 -3 - 2859 Sialic acid-specific 9-O-acetylesterase - none -
fig|6666666.230108.peg.1049 CDS JH724260.1 2190922 2188532 -1 - 2391 Alpha-xylosidase (EC 3.2.1.-) Xylose utilization
fig|6666666.230108.peg.1050 CDS JH724260.1 2192553 2190937 -3 - 1617 Alpha-L-fucosidase (EC 3.2.1.51) - none -
fig|6666666.230108.peg.1051 CDS JH724260.1 2195718 2192611 -3 - 3108 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.1052 CDS JH724260.1 2197822 2195741 -1 - 2082 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.1053 CDS JH724260.1 2201577 2197828 -3 - 3750 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.1054 CDS JH724260.1 2203622 2201550 -2 - 2073 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.1055 CDS JH724260.1 2205147 2203654 -3 - 1494 endo-beta-1,4-glucanase (celulase B) - none -
fig|6666666.230108.peg.1056 CDS JH724260.1 2206675 2205218 -1 - 1458 FIG00412418: hypothetical protein - none -
fig|6666666.230108.peg.1057 CDS JH724260.1 2208272 2206716 -2 - 1557 FIG00415907: hypothetical protein - none -
fig|6666666.230108.peg.1058 CDS JH724260.1 2211480 2208382 -3 - 3099 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.1059 CDS JH724260.1 2215193 2211678 -2 - 3516 DNA-binding response regulator, AraC family - none -
fig|6666666.230108.peg.1060 CDS JH724260.1 2215765 2215349 -1 - 417 transposase - none -
fig|6666666.230108.peg.1061 CDS JH724260.1 2216995 2216465 -1 - 531 Sensory box/GGDEF family protein - none -
fig|6666666.230108.peg.1062 CDS JH724260.1 2217270 2219267 3 + 1998 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.1063 CDS JH724260.1 2220431 2219349 -2 - 1083 Endo-1,4-beta-xylanase D - none -
fig|6666666.230108.peg.1064 CDS JH724260.1 2220591 2222117 3 + 1527 MutS-related protein, family 1 DNA repair, bacterial MutL-MutS system
fig|6666666.230108.peg.1065 CDS JH724260.1 2222958 2222197 -3 - 762 Unknown pentose utilization regulator, DeoR family - none -
fig|6666666.230108.peg.1066 CDS JH724260.1 2223580 2222966 -1 - 615 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.230108.peg.1067 CDS JH724260.1 2223835 2224668 1 + 834 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.230108.peg.1068 CDS JH724260.1 2224670 2225593 2 + 924 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.230108.peg.1069 CDS JH724260.1 2225642 2227120 2 + 1479 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230108.peg.1070 CDS JH724260.1 2227159 2228583 1 + 1425 Unknown pentose isomerase TM0951 - none -
fig|6666666.230108.peg.1071 CDS JH724260.1 2228619 2229635 3 + 1017 L-rhamnose-proton symporter - none -
fig|6666666.230108.peg.1072 CDS JH724260.1 2229710 2232766 2 + 3057 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.1073 CDS JH724260.1 2232787 2234334 1 + 1548 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1074 CDS JH724260.1 2234356 2235897 1 + 1542 hypothetical protein-signal peptide and transmembrane prediction - none -
fig|6666666.230108.peg.1075 CDS JH724260.1 2235933 2237129 3 + 1197 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.230108.peg.1076 CDS JH724260.1 2237143 2239479 1 + 2337 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.1077 CDS JH724260.1 2239718 2241259 2 + 1542 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.230108.peg.1078 CDS JH724260.1 2241328 2241972 1 + 645 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.230108.peg.1079 CDS JH724260.1 2244057 2242117 -3 - 1941 Beta-lactamase (Cephalosporinase) (EC 3.5.2.6) Beta-lactamase
fig|6666666.230108.peg.1080 CDS JH724260.1 2244850 2244041 -1 - 810 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.230108.peg.1081 CDS JH724260.1 2245736 2244897 -2 - 840 FIG00404118: hypothetical protein - none -
fig|6666666.230108.peg.1082 CDS JH724260.1 2247050 2245866 -2 - 1185 N-acetylglucosamine related transporter, NagX - none -
fig|6666666.230108.peg.1083 CDS JH724260.1 2250044 2247084 -2 - 2961 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing - none -
fig|6666666.230108.peg.1084 CDS JH724260.1 2251410 2250220 -3 - 1191 alternate gene name: yzbB - none -
fig|6666666.230108.peg.1085 CDS JH724260.1 2252832 2251510 -3 - 1323 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.230108.peg.1086 CDS JH724260.1 2254179 2252860 -3 - 1320 Amidase enhancer - none -
fig|6666666.230108.peg.1087 CDS JH724260.1 2255153 2254221 -2 - 933 putative glycosyltransferase - possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide Rhamnose containing glycans
fig|6666666.230108.peg.1088 CDS JH724260.1 2256615 2255155 -3 - 1461 Putative glycosyltransferase CBSS-296591.1.peg.2330
fig|6666666.230108.peg.1089 CDS JH724260.1 2258469 2256640 -3 - 1830 Serine/threonine protein kinase related protein - none -
fig|6666666.230108.peg.1090 CDS JH724260.1 2261509 2258519 -1 - 2991 Xanthan lyase - none -
fig|6666666.230108.peg.1091 CDS JH724260.1 2262979 2261525 -1 - 1455 sodium/iodide co-transporter - none -
fig|6666666.230108.peg.1092 CDS JH724260.1 2264290 2263124 -1 - 1167 alternate gene name: yzbB - none -
fig|6666666.230108.peg.1093 CDS JH724260.1 2264423 2264545 2 + 123 hypothetical protein - none -
fig|6666666.230108.peg.1094 CDS JH724260.1 2266614 2264521 -3 - 2094 putative helicase - none -
fig|6666666.230108.peg.1095 CDS JH724260.1 2266986 2267609 3 + 624 putative DNA-binding protein - none -
fig|6666666.230108.peg.1096 CDS JH724260.1 2268066 2267758 -3 - 309 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.230108.peg.1097 CDS JH724260.1 2268342 2268070 -3 - 273 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.230108.peg.1098 CDS JH724260.1 2269986 2268433 -3 - 1554 hypothetical protein - none -
fig|6666666.230108.peg.1099 CDS JH724260.1 2271841 2270195 -1 - 1647 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1100 CDS JH724260.1 2275208 2271903 -2 - 3306 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.1101 CDS JH724260.1 2275873 2276550 1 + 678 hypothetical protein - none -
fig|6666666.230108.peg.1102 CDS JH724260.1 2276679 2276530 -3 - 150 hypothetical protein - none -
fig|6666666.230108.peg.1103 CDS JH724260.1 2276963 2280304 2 + 3342 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.1104 CDS JH724260.1 2280324 2282222 3 + 1899 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1105 CDS JH724260.1 2283302 2282295 -2 - 1008 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.230108.peg.1106 CDS JH724260.1 2283457 2285586 1 + 2130 Na+/H+ antiporter - none -
fig|6666666.230108.peg.1107 CDS JH724260.1 2285645 2286355 2 + 711 Molybdopterin biosynthesis protein MoeB - none -
fig|6666666.230108.peg.1108 CDS JH724260.1 2286420 2287079 3 + 660 Lipoprotein releasing system ATP-binding protein LolD Lipoprotein sorting system
fig|6666666.230108.peg.1109 CDS JH724260.1 2289406 2287082 -1 - 2325 FIG00404599: hypothetical protein - none -
fig|6666666.230108.peg.1110 CDS JH724260.1 2290481 2289531 -2 - 951 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230108.peg.1111 CDS JH724260.1 2291855 2290488 -2 - 1368 Putative sodium-dependent transporter - none -
fig|6666666.230108.peg.1112 CDS JH724260.1 2291959 2292342 1 + 384 FIG00405104: hypothetical protein - none -
fig|6666666.230108.peg.1113 CDS JH724260.1 2293643 2292345 -2 - 1299 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.230108.peg.1114 CDS JH724260.1 2293828 2294679 1 + 852 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.230108.peg.1115 CDS JH724260.1 2294706 2295470 3 + 765 Diadenylate cyclase spyDAC; Bacterial checkpoint controller DisA with nucleotide-binding domain Bacterial checkpoint-control-related cluster;
Bacterial checkpoint-control-related cluster
fig|6666666.230108.peg.1116 CDS JH724260.1 2295550 2297088 1 + 1539 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.230108.peg.1117 CDS JH724260.1 2297111 2298430 2 + 1320 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.230108.peg.1118 CDS JH724260.1 2299452 2298433 -3 - 1020 PhnO protein - none -
fig|6666666.230108.peg.1119 CDS JH724260.1 2300406 2299492 -3 - 915 FIG00406100: hypothetical protein - none -
fig|6666666.230108.peg.1120 CDS JH724260.1 2301154 2300459 -1 - 696 LrgA-associated membrane protein LrgB Murein hydrolase regulation and cell death
fig|6666666.230108.peg.1121 CDS JH724260.1 2301489 2301151 -3 - 339 Antiholin-like protein LrgA Murein hydrolase regulation and cell death
fig|6666666.230108.peg.1122 CDS JH724260.1 2301506 2301625 2 + 120 hypothetical protein - none -
fig|6666666.230108.peg.1123 CDS JH724260.1 2301812 2302831 2 + 1020 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.230108.peg.1124 CDS JH724260.1 2302868 2304049 2 + 1182 Acetate kinase (EC 2.7.2.1) CBSS-257314.1.peg.752;
Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.230108.peg.1125 CDS JH724260.1 2304230 2305630 2 + 1401 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.230108.peg.1126 CDS JH724260.1 2305949 2305737 -2 - 213 FIG00410184: hypothetical protein - none -
fig|6666666.230108.peg.1127 CDS JH724260.1 2307905 2306049 -2 - 1857 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.230108.peg.1128 CDS JH724260.1 2308717 2307947 -1 - 771 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) Llipid A biosynthesis cluster
fig|6666666.230108.peg.1129 CDS JH724260.1 2309062 2308751 -1 - 312 probably aromatic ring hydroxylating enzyme, evidenced by COGnitor; PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.230108.peg.1130 CDS JH724260.1 2310098 2309412 -2 - 687 DNA repair protein RadC Bacterial cell division cluster;
DNA repair, bacterial
fig|6666666.230108.peg.1131 CDS JH724260.1 2311119 2310130 -3 - 990 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230108.peg.1132 CDS JH724260.1 2311831 2311265 -1 - 567 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.230108.peg.1133 CDS JH724260.1 2311939 2312187 1 + 249 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.230108.peg.1134 CDS JH724260.1 2312358 2313005 3 + 648 FIG00938099: hypothetical protein - none -
fig|6666666.230108.peg.1135 CDS JH724260.1 2313059 2314129 2 + 1071 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.230108.peg.1136 CDS JH724260.1 2314126 2315106 1 + 981 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.230108.peg.1137 CDS JH724260.1 2315119 2316276 1 + 1158 FIG00938859: hypothetical protein - none -
fig|6666666.230108.peg.1138 CDS JH724260.1 2316281 2316949 2 + 669 FIG00402748: hypothetical protein - none -
fig|6666666.230108.peg.1139 CDS JH724260.1 2316951 2317349 3 + 399 FIG00403504: hypothetical protein - none -
fig|6666666.230108.peg.1140 CDS JH724260.1 2318443 2317490 -1 - 954 N-acetylornithine carbamoyltransferase (EC 2.1.3.9) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230108.peg.1141 CDS JH724260.1 2319678 2318488 -3 - 1191 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.230108.peg.1142 CDS JH724260.1 2320881 2319802 -3 - 1080 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.230108.peg.1143 CDS JH724260.1 2321110 2320871 -1 - 240 FIG00405789: hypothetical protein - none -
fig|6666666.230108.peg.1144 CDS JH724260.1 2322025 2321186 -1 - 840 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.230108.peg.1145 CDS JH724260.1 2322536 2322135 -2 - 402 Outer membrane protein H precursor Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.230108.peg.1146 CDS JH724260.1 2323285 2322770 -1 - 516 Outer membrane protein H precursor Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.230108.peg.1147 CDS JH724260.1 2325973 2323334 -1 - 2640 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.230108.peg.1148 CDS JH724260.1 2326763 2326026 -2 - 738 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.230108.peg.1149 CDS JH724260.1 2327932 2326766 -1 - 1167 FIG00936986: hypothetical protein - none -
fig|6666666.230108.peg.1150 CDS JH724260.1 2329320 2328265 -3 - 1056 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.230108.peg.1151 CDS JH724260.1 2329395 2330231 3 + 837 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.230108.peg.1152 CDS JH724260.1 2330228 2330707 2 + 480 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.230108.peg.1153 CDS JH724260.1 2330790 2331428 3 + 639 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.230108.peg.1154 CDS JH724260.1 2331522 2331932 3 + 411 FIG00938009: hypothetical protein - none -
fig|6666666.230108.peg.1155 CDS JH724260.1 2331954 2333294 3 + 1341 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230108.peg.1157 CDS JH724260.1 2335318 2335157 -1 - 162 hypothetical protein - none -
fig|6666666.230108.peg.1158 CDS JH724260.1 2336487 2335411 -3 - 1077 FIG00937482: hypothetical protein - none -
fig|6666666.230108.peg.1159 CDS JH724260.1 2336668 2337816 1 + 1149 hypothetical protein - none -
fig|6666666.230108.peg.1160 CDS JH724260.1 2338075 2337836 -1 - 240 hypothetical protein - none -
fig|6666666.230108.peg.1161 CDS JH724260.1 2338221 2338526 3 + 306 hypothetical protein - none -
fig|6666666.230108.peg.1162 CDS JH724260.1 2338560 2338811 3 + 252 hypothetical protein - none -
fig|6666666.230108.peg.1163 CDS JH724260.1 2339221 2339072 -1 - 150 hypothetical protein - none -
fig|6666666.230108.peg.1164 CDS JH724260.1 2339220 2339591 3 + 372 Mobile element protein - none -
fig|6666666.230108.peg.1165 CDS JH724260.1 2339665 2341236 1 + 1572 Mobile element protein - none -
fig|6666666.230108.peg.1166 CDS JH724260.1 2341719 2342138 3 + 420 Integrase - none -
fig|6666666.230108.peg.1167 CDS JH724260.1 2344099 2342135 -1 - 1965 putative patatin-like phospholipase - none -
fig|6666666.230108.peg.1168 CDS JH724260.1 2344791 2345027 3 + 237 hypothetical protein - none -
fig|6666666.230108.peg.1169 CDS JH724260.1 2345202 2345089 -3 - 114 hypothetical protein - none -
fig|6666666.230108.peg.1170 CDS JH724260.1 2346311 2345304 -2 - 1008 hypothetical protein - none -
fig|6666666.230108.peg.1171 CDS JH724260.1 2346985 2347146 1 + 162 hypothetical protein - none -
fig|6666666.230108.peg.1172 CDS JH724260.1 2347389 2348663 3 + 1275 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) Group II intron-associated genes
fig|6666666.230108.peg.1173 CDS JH724260.1 2350436 2349186 -2 - 1251 FIG00414882: hypothetical protein - none -
fig|6666666.230108.peg.1174 CDS JH724260.1 2352311 2350656 -2 - 1656 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases - none -
fig|6666666.230108.peg.1175 CDS JH724260.1 2352873 2352319 -3 - 555 Transcriptional regulator - none -
fig|6666666.230108.peg.1176 CDS JH724260.1 2353768 2352995 -1 - 774 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
Proline Synthesis
fig|6666666.230108.peg.1177 CDS JH724260.1 2355019 2353898 -1 - 1122 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230108.peg.1178 CDS JH724260.1 2355993 2355025 -3 - 969 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230108.peg.1179 CDS JH724260.1 2356204 2355986 -1 - 219 Stress-responsive transcriptional regulator - none -
fig|6666666.230108.peg.1180 CDS JH724260.1 2357410 2356205 -1 - 1206 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.230108.peg.1181 CDS JH724260.1 2357981 2357424 -2 - 558 FIG00651573: hypothetical protein - none -
fig|6666666.230108.peg.1182 CDS JH724260.1 2358490 2358017 -1 - 474 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine and Ornithine Degradation
fig|6666666.230108.peg.1183 CDS JH724260.1 2358673 2358524 -1 - 150 hypothetical protein - none -
fig|6666666.230108.peg.1184 CDS JH724260.1 2358809 2360281 2 + 1473 Rhamnulokinase (EC 2.7.1.5) - none -
fig|6666666.230108.peg.1185 CDS JH724260.1 2360323 2361576 1 + 1254 L-rhamnose isomerase (EC 5.3.1.14) - none -
fig|6666666.230108.peg.1186 CDS JH724260.1 2361599 2362609 2 + 1011 L-rhamnose-proton symporter - none -
fig|6666666.230108.peg.1187 CDS JH724260.1 2362657 2363466 1 + 810 Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) - none -
fig|6666666.230108.peg.1188 CDS JH724260.1 2363492 2364646 2 + 1155 Lactaldehyde reductase (EC 1.1.1.77) - none -
fig|6666666.230108.peg.1189 CDS JH724260.1 2364769 2365686 1 + 918 Transcriptional regulator of rhamnose utilization, AraC family - none -
fig|6666666.230108.peg.1190 CDS JH724260.1 2367027 2366026 -3 - 1002 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.230108.peg.1191 CDS JH724260.1 2367221 2368057 2 + 837 FIG00938655: hypothetical protein - none -
fig|6666666.230108.peg.1192 CDS JH724260.1 2368354 2368530 1 + 177 hypothetical protein - none -
fig|6666666.230108.peg.1193 CDS JH724260.1 2368554 2368850 3 + 297 hypothetical protein - none -
fig|6666666.230108.peg.1194 CDS JH724260.1 2368865 2369782 2 + 918 FIG00410951: hypothetical protein - none -
fig|6666666.230108.peg.1195 CDS JH724260.1 2371195 2369867 -1 - 1329 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.230108.peg.1196 CDS JH724260.1 2372329 2371226 -1 - 1104 Membrane fusion efflux protein - none -
fig|6666666.230108.peg.1197 CDS JH724260.1 2373649 2372408 -1 - 1242 ABC transporter permease protein - none -
fig|6666666.230108.peg.1198 CDS JH724260.1 2374914 2373655 -3 - 1260 ABC transporter permease protein - none -
fig|6666666.230108.peg.1199 CDS JH724260.1 2375685 2374969 -3 - 717 ABC transporter ATP-binding protein YvcR - none -
fig|6666666.230108.peg.1200 CDS JH724260.1 2375862 2376842 3 + 981 Glucokinase (EC 2.7.1.2) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.230108.peg.1201 CDS JH724260.1 2377095 2376943 -3 - 153 hypothetical protein - none -
fig|6666666.230108.peg.1202 CDS JH724260.1 2377298 2377185 -2 - 114 hypothetical protein - none -
fig|6666666.230108.peg.1203 CDS JH724260.1 2377933 2377580 -1 - 354 LSU ribosomal protein L19p - none -
fig|6666666.230108.peg.1204 CDS JH724260.1 2378187 2378963 3 + 777 5@1-nucleotidase (EC 3.1.3.5) Purine conversions
fig|6666666.230108.peg.1205 CDS JH724260.1 2378986 2379903 1 + 918 5@1-nucleotidase (EC 3.1.3.5) Purine conversions
fig|6666666.230108.peg.1206 CDS JH724260.1 2379908 2382919 2 + 3012 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230108.peg.1207 CDS JH724260.1 2382940 2385984 1 + 3045 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230108.peg.1208 CDS JH724260.1 2386722 2386093 -3 - 630 FIG00404706: hypothetical protein - none -
fig|6666666.230108.peg.1209 CDS JH724260.1 2387484 2386846 -3 - 639 FIG00404238: hypothetical protein - none -
fig|6666666.230108.peg.1210 CDS JH724260.1 2389691 2387676 -2 - 2016 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.1211 CDS JH724260.1 2390702 2389698 -2 - 1005 Putative ion-channel protein - none -
fig|6666666.230108.peg.1212 CDS JH724260.1 2393207 2390721 -2 - 2487 Cellobiose phosphorylase (EC 2.4.1.-) - none -
fig|6666666.230108.peg.1213 CDS JH724260.1 2393430 2395874 3 + 2445 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.1214 CDS JH724260.1 2396179 2397066 1 + 888 Transcriptional regulator of various polyols utilization, AraC family - none -
fig|6666666.230108.peg.1215 CDS JH724260.1 2397139 2398422 1 + 1284 FIG00937556: hypothetical protein - none -
fig|6666666.230108.peg.1216 CDS JH724260.1 2398514 2399806 2 + 1293 Endo-1,4-beta-mannosidase Mannose Metabolism
fig|6666666.230108.peg.1217 CDS JH724260.1 2399964 2400890 3 + 927 Endoglucanase 5A (EC 3.2.1.4) (Endo-1,4-beta-glucanase 5A) (Alkaline cellulase) - none -
fig|6666666.230108.peg.1218 CDS JH724260.1 2400954 2401067 3 + 114 hypothetical protein - none -
fig|6666666.230108.peg.1219 CDS JH724260.1 2401125 2403728 3 + 2604 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.1220 CDS JH724260.1 2403716 2404387 2 + 672 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.1221 CDS JH724260.1 2404408 2406129 1 + 1722 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1222 CDS JH724260.1 2406134 2407447 2 + 1314 FIG00417257: hypothetical protein - none -
fig|6666666.230108.peg.1223 CDS JH724260.1 2407469 2409454 2 + 1986 FIG00410329: hypothetical protein - none -
fig|6666666.230108.peg.1224 CDS JH724260.1 2409522 2411219 3 + 1698 Mannan endo-1,4-beta-mannosidase B precursor (EC 3.2.1.78) - none -
fig|6666666.230108.peg.1225 CDS JH724260.1 2412121 2411705 -1 - 417 transposase - none -
fig|6666666.230108.peg.1226 CDS JH724260.1 2412719 2415934 2 + 3216 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.1227 CDS JH724260.1 2416022 2417716 2 + 1695 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1228 CDS JH724260.1 2417704 2418600 1 + 897 FIG00416167: hypothetical protein - none -
fig|6666666.230108.peg.1229 CDS JH724260.1 2418670 2419392 1 + 723 hypothetical protein - none -
fig|6666666.230108.peg.1230 CDS JH724260.1 2419670 2419557 -2 - 114 hypothetical protein - none -
fig|6666666.230108.peg.1231 CDS JH724260.1 2420381 2419713 -2 - 669 putative DNA-binding protein - none -
fig|6666666.230108.peg.1232 CDS JH724260.1 2420714 2422042 2 + 1329 putative helicase - none -
fig|6666666.230108.peg.1233 CDS JH724260.1 2422273 2423430 1 + 1158 RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein - none -
fig|6666666.230108.peg.1234 CDS JH724260.1 2423525 2424124 2 + 600 FIG00896332: hypothetical protein - none -
fig|6666666.230108.peg.1235 CDS JH724260.1 2424096 2425547 3 + 1452 FIG00897658: hypothetical protein - none -
fig|6666666.230108.peg.1236 CDS JH724260.1 2425551 2427026 3 + 1476 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.230108.peg.1237 CDS JH724260.1 2427077 2428843 2 + 1767 FIG00897120: hypothetical protein - none -
fig|6666666.230108.peg.1238 CDS JH724260.1 2428845 2430314 3 + 1470 FIG00899022: hypothetical protein - none -
fig|6666666.230108.peg.1239 CDS JH724260.1 2430431 2431561 2 + 1131 Mannan endo-1,4-beta-mannosidase - none -
fig|6666666.230108.peg.1240 CDS JH724260.1 2431584 2432756 3 + 1173 COG2152 predicted glycoside hydrolase - none -
fig|6666666.230108.peg.1241 CDS JH724260.1 2432774 2434168 2 + 1395 Xyloside transporter XynT Xylose utilization
fig|6666666.230108.peg.1242 CDS JH724260.1 2434187 2435374 2 + 1188 N-acylglucosamine 2-epimerase (EC 5.1.3.8) Sialic Acid Metabolism
fig|6666666.230108.peg.1243 CDS JH724260.1 2435405 2436184 2 + 780 FIG00412864: hypothetical protein - none -
fig|6666666.230108.peg.1244 CDS JH724260.1 2437554 2436181 -3 - 1374 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.230108.peg.1245 CDS JH724260.1 2437820 2439172 2 + 1353 Response regulator of zinc sigma-54-dependent two-component system Zinc resistance
fig|6666666.230108.peg.1246 CDS JH724260.1 2439642 2441363 3 + 1722 Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) Potassium homeostasis
fig|6666666.230108.peg.1247 CDS JH724260.1 2441394 2443442 3 + 2049 Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) Potassium homeostasis
fig|6666666.230108.peg.1248 CDS JH724260.1 2443455 2444027 3 + 573 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) Potassium homeostasis
fig|6666666.230108.peg.1249 CDS JH724260.1 2444174 2444929 2 + 756 FrrB - none -
fig|6666666.230108.peg.1250 CDS JH724260.1 2444964 2446163 3 + 1200 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.230108.peg.1251 CDS JH724260.1 2446184 2447623 2 + 1440 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.230108.peg.1252 CDS JH724260.1 2448379 2447630 -1 - 750 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.1253 CDS JH724260.1 2450174 2448534 -2 - 1641 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.230108.peg.1254 CDS JH724260.1 2451303 2450209 -3 - 1095 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.230108.peg.1255 CDS JH724260.1 2452714 2451380 -1 - 1335 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.230108.peg.1256 CDS JH724260.1 2453234 2453620 2 + 387 FIG00937093: hypothetical protein - none -
fig|6666666.230108.peg.1257 CDS JH724260.1 2453746 2455599 1 + 1854 membrane protein, putative - none -
fig|6666666.230108.peg.1258 CDS JH724260.1 2455614 2456828 3 + 1215 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.230108.peg.1259 CDS JH724260.1 2457021 2458103 3 + 1083 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230108.peg.1260 CDS JH724260.1 2460877 2458916 -1 - 1962 two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.1261 CDS JH724260.1 2462733 2460874 -3 - 1860 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.1262 CDS JH724260.1 2464742 2462889 -2 - 1854 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.230108.peg.1263 CDS JH724260.1 2464846 2465154 1 + 309 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.230108.peg.1264 CDS JH724260.1 2465151 2465495 3 + 345 FIG00408297: hypothetical protein - none -
fig|6666666.230108.peg.1265 CDS JH724260.1 2466920 2465589 -2 - 1332 FIG01093408: hypothetical protein - none -
fig|6666666.230108.peg.1266 CDS JH724260.1 2468459 2466948 -2 - 1512 glycoside hydrolase family 30, candidate beta-glycosidase - none -
fig|6666666.230108.peg.1267 CDS JH724260.1 2470017 2468491 -3 - 1527 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1268 CDS JH724260.1 2473020 2470036 -3 - 2985 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.1269 CDS JH724260.1 2473392 2475107 3 + 1716 Regulatory protein SusR Cellulosome
fig|6666666.230108.peg.1270 CDS JH724260.1 2475698 2475558 -2 - 141 hypothetical protein - none -
fig|6666666.230108.peg.1271 CDS JH724260.1 2475821 2475967 2 + 147 hypothetical protein - none -
fig|6666666.230108.peg.1272 CDS JH724260.1 2481693 2482139 3 + 447 FIG00403079: hypothetical protein - none -
fig|6666666.230108.peg.1273 CDS JH724260.1 2482339 2483151 1 + 813 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.230108.peg.1274 CDS JH724260.1 2483245 2483850 1 + 606 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.230108.peg.1275 CDS JH724260.1 2483890 2484540 1 + 651 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.230108.peg.1276 CDS JH724260.1 2484569 2485384 2 + 816 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.230108.peg.1277 CDS JH724260.1 2485396 2486346 1 + 951 Putative phosphate ABC transporter, phosphate-binding component - none -
fig|6666666.230108.peg.1278 CDS JH724260.1 2486352 2487797 3 + 1446 Tetratricopeptide repeat family protein - none -
fig|6666666.230108.peg.1279 CDS JH724260.1 2488774 2487845 -1 - 930 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.1280 CDS JH724260.1 2489015 2489866 2 + 852 ABC transporter, ATP-binding protein - none -
fig|6666666.230108.peg.1281 CDS JH724260.1 2489866 2490696 1 + 831 FIG00403434: hypothetical protein - none -
fig|6666666.230108.peg.1282 CDS JH724260.1 2490699 2491067 3 + 369 Transcriptional regulator, GntR family - none -
fig|6666666.230108.peg.1283 CDS JH724260.1 2491080 2491913 3 + 834 FIG00402879: hypothetical protein - none -
fig|6666666.230108.peg.1284 CDS JH724260.1 2491966 2493276 1 + 1311 Anaerobic C4-dicarboxylate transporter - none -
fig|6666666.230108.peg.1285 CDS JH724260.1 2493825 2493670 -3 - 156 hypothetical protein - none -
fig|6666666.230108.peg.1286 CDS JH724260.1 2494953 2494384 -3 - 570 Probable lipase (EC 3.1.1.1) - none -
fig|6666666.230108.peg.1287 CDS JH724260.1 2495916 2495239 -3 - 678 hypothetical protein - none -
fig|6666666.230108.peg.1288 CDS JH724260.1 2496770 2495985 -2 - 786 FIG00412864: hypothetical protein - none -
fig|6666666.230108.peg.1289 CDS JH724260.1 2498453 2496783 -2 - 1671 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1290 CDS JH724260.1 2501754 2498470 -3 - 3285 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.1291 CDS JH724260.1 2502231 2506055 3 + 3825 DNA-binding response regulator, AraC family - none -
fig|6666666.230108.peg.1292 CDS JH724260.1 2506339 2506923 1 + 585 Transcriptional regulator, TetR family - none -
fig|6666666.230108.peg.1293 CDS JH724260.1 2506955 2507701 2 + 747 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.230108.peg.1294 CDS JH724260.1 2507794 2508465 1 + 672 Similar to tRNA pseudouridine synthase C, group TruC1 RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.230108.peg.1295 CDS JH724260.1 2508476 2511013 2 + 2538 ApeH acylamino-acid-releasing enzyme (EC 3.4.19.1) - none -
fig|6666666.230108.peg.1296 CDS JH724260.1 2511283 2511101 -1 - 183 hypothetical protein - none -
fig|6666666.230108.peg.1297 CDS JH724260.1 2512933 2511506 -1 - 1428 RteB, two-component system response regulator - none -
fig|6666666.230108.peg.1298 CDS JH724260.1 2513027 2513866 2 + 840 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Queuosine-Archaeosine Biosynthesis
fig|6666666.230108.peg.1299 CDS JH724260.1 2513891 2515129 2 + 1239 putative zinc protease - none -
fig|6666666.230108.peg.1300 CDS JH724260.1 2515131 2516474 3 + 1344 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog Multidrug Resistance Efflux Pumps
fig|6666666.230108.peg.1301 CDS JH724260.1 2516479 2518773 1 + 2295 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.1302 CDS JH724260.1 2518914 2523431 3 + 4518 FIG00938273: hypothetical protein - none -
fig|6666666.230108.peg.1303 CDS JH724260.1 2523441 2525795 3 + 2355 FIG00896779: hypothetical protein - none -
fig|6666666.230108.peg.1304 CDS JH724260.1 2525922 2526833 3 + 912 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230108.peg.1305 CDS JH724260.1 2528548 2526878 -1 - 1671 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.230108.peg.1306 CDS JH724260.1 2529734 2528571 -2 - 1164 hypothetical protein - none -
fig|6666666.230108.peg.1307 CDS JH724260.1 2530009 2529743 -1 - 267 hypothetical protein - none -
fig|6666666.230108.peg.1308 CDS JH724260.1 2530462 2530022 -1 - 441 hypothetical protein - none -
fig|6666666.230108.peg.1309 CDS JH724260.1 2531415 2530489 -3 - 927 FIG00936896: hypothetical protein - none -
fig|6666666.230108.peg.1310 CDS JH724260.1 2535219 2531662 -3 - 3558 Predicted cell-wall-anchored protein SasA (LPXTG motif) - none -
fig|6666666.230108.peg.1311 CDS JH724260.1 2535469 2535254 -1 - 216 hypothetical protein - none -
fig|6666666.230108.peg.1312 CDS JH724260.1 2536940 2536812 -2 - 129 hypothetical protein - none -
fig|6666666.230108.peg.1313 CDS JH724260.1 2537027 2537359 2 + 333 FIG00898702: hypothetical protein - none -
fig|6666666.230108.peg.1314 CDS JH724260.1 2537557 2538369 1 + 813 Slr1117 protein - none -
fig|6666666.230108.peg.1315 CDS JH724260.1 2539292 2538444 -2 - 849 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.1316 CDS JH724260.1 2539513 2541006 1 + 1494 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.1317 CDS JH724260.1 2541111 2543072 3 + 1962 ABC transporter ATP-binding protein - none -
fig|6666666.230108.peg.1318 CDS JH724260.1 2543087 2545129 2 + 2043 Endothelin-converting enzyme 1 precursor (EC 3.4.24.71) - none -
fig|6666666.230108.peg.1319 CDS JH724260.1 2545290 2546813 3 + 1524 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.230108.peg.1320 CDS JH724260.1 2546969 2547958 2 + 990 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster
fig|6666666.230108.peg.1321 CDS JH724260.1 2548069 2548803 1 + 735 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.230108.peg.1322 CDS JH724260.1 2548910 2549413 2 + 504 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.230108.peg.1323 CDS JH724260.1 2549436 2551301 3 + 1866 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
Bacterial cell division cluster;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.230108.peg.1324 CDS JH724260.1 2551389 2552843 3 + 1455 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Bacterial cell division cluster;
Peptidoglycan Biosynthesis
fig|6666666.230108.peg.1325 CDS JH724260.1 2553646 2553161 -1 - 486 GldH - none -
fig|6666666.230108.peg.1326 CDS JH724260.1 2555000 2553624 -2 - 1377 Signal peptidase-like protein Heat shock dnaK gene cluster extended
fig|6666666.230108.peg.1327 CDS JH724260.1 2556201 2555074 -3 - 1128 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.230108.peg.1328 CDS JH724260.1 2557227 2556274 -3 - 954 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.230108.peg.1329 CDS JH724260.1 2559367 2557319 -1 - 2049 FIG00414387: hypothetical protein - none -
fig|6666666.230108.peg.1330 CDS JH724260.1 2559567 2560484 3 + 918 Homoserine O-succinyltransferase (EC 2.3.1.46) Methionine Biosynthesis
fig|6666666.230108.peg.1331 CDS JH724260.1 2560503 2562368 3 + 1866 Putative collagenase - none -
fig|6666666.230108.peg.1332 CDS JH724260.1 2562410 2563465 2 + 1056 FIG00406392: hypothetical protein - none -
fig|6666666.230108.peg.1333 CDS JH724260.1 2563542 2563829 3 + 288 FIG00414669: hypothetical protein - none -
fig|6666666.230108.peg.1334 CDS JH724260.1 2563867 2564229 1 + 363 VapC toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.230108.peg.1335 CDS JH724260.1 2566780 2564342 -1 - 2439 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.1336 CDS JH724260.1 2567674 2567063 -1 - 612 LuxR family transcriptional regulator - none -
fig|6666666.230108.peg.1337 CDS JH724260.1 2571018 2567764 -3 - 3255 DNA-binding response regulator, AraC family - none -
fig|6666666.230108.peg.1338 CDS JH724260.1 2571675 2571145 -3 - 531 DNA-binding response regulator, AraC family - none -
fig|6666666.230108.peg.1339 CDS JH724260.1 2573472 2571850 -3 - 1623 NAD-utilizing dehydrogenases - none -
fig|6666666.230108.peg.1340 CDS JH724260.1 2574845 2573478 -2 - 1368 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.230108.peg.1341 CDS JH724260.1 2574967 2575509 1 + 543 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.230108.peg.1342 CDS JH724260.1 2576557 2575520 -1 - 1038 L-asparaginase I, cytoplasmic (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230108.peg.1343 CDS JH724260.1 2577006 2579438 3 + 2433 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230108.peg.1344 CDS JH724260.1 2579460 2580719 3 + 1260 Predicted functional analog of homoserine kinase (EC 2.7.1.-) Threonine and Homoserine Biosynthesis
fig|6666666.230108.peg.1345 CDS JH724260.1 2580790 2582091 1 + 1302 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.230108.peg.1346 CDS JH724260.1 2582922 2582599 -3 - 324 hypothetical protein - none -
fig|6666666.230108.peg.1347 CDS JH724260.1 2583107 2582907 -2 - 201 hypothetical protein - none -
fig|6666666.230108.peg.1348 CDS JH724260.1 2583144 2584052 3 + 909 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.230108.peg.1349 CDS JH724260.1 2584689 2584012 -3 - 678 Thiamin pyrophosphokinase (EC 2.7.6.2) Thiamin biosynthesis
fig|6666666.230108.peg.1350 CDS JH724260.1 2585347 2584697 -1 - 651 Predicted thiamin transporter PnuT Thiamin biosynthesis
fig|6666666.230108.peg.1351 CDS JH724260.1 2587659 2585347 -3 - 2313 Thiamin-regulated outer membrane receptor Omr1 Thiamin biosynthesis
fig|6666666.230108.peg.1352 CDS JH724260.1 2587896 2588765 3 + 870 Small-conductance mechanosensitive channel - none -
fig|6666666.230108.peg.1353 CDS JH724260.1 2588969 2589535 2 + 567 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.1354 CDS JH724260.1 2589565 2590554 1 + 990 Putative anti-sigma factor - none -
fig|6666666.230108.peg.1355 CDS JH724260.1 2590734 2593997 3 + 3264 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1356 CDS JH724260.1 2594220 2595677 3 + 1458 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1357 CDS JH724260.1 2595754 2597028 1 + 1275 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.1358 CDS JH724260.1 2597544 2597128 -3 - 417 transposase - none -
fig|6666666.230108.peg.1359 CDS JH724260.1 2598232 2599845 1 + 1614 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.1360 CDS JH724260.1 2600144 2599896 -2 - 249 FIG00404225: hypothetical protein - none -
fig|6666666.230108.peg.1361 CDS JH724260.1 2600274 2600816 3 + 543 hypothetical protein - none -
fig|6666666.230108.peg.1362 CDS JH724260.1 2601272 2600865 -2 - 408 putative general stress protein - none -
fig|6666666.230108.peg.1363 CDS JH724260.1 2602164 2601349 -3 - 816 transcriptional regulator - none -
fig|6666666.230108.peg.1364 CDS JH724260.1 2602301 2602741 2 + 441 hypothetical protein - none -
fig|6666666.230108.peg.1365 CDS JH724260.1 2603012 2603185 2 + 174 hypothetical protein - none -
fig|6666666.230108.peg.1366 CDS JH724260.1 2603357 2603241 -2 - 117 hypothetical protein - none -
fig|6666666.230108.peg.1367 CDS JH724260.1 2603822 2605198 2 + 1377 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230108.peg.1368 CDS JH724260.1 2605338 2606177 3 + 840 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.1369 CDS JH724260.1 2606186 2606959 2 + 774 GCN5-related N-acetyltransferase - none -
fig|6666666.230108.peg.1370 CDS JH724260.1 2606964 2607194 3 + 231 Tetracycline resistance element mobilization regulatory protein rteC - none -
fig|6666666.230108.peg.1371 CDS JH724260.1 2607438 2607554 3 + 117 hypothetical protein - none -
fig|6666666.230108.peg.1372 CDS JH724260.1 2607863 2607621 -2 - 243 Transposase - none -
fig|6666666.230108.peg.1373 CDS JH724260.1 2609416 2608301 -1 - 1116 Transporter - none -
fig|6666666.230108.peg.1374 CDS JH724260.1 2610044 2609439 -2 - 606 Thymidine kinase (EC 2.7.1.21) - none -
fig|6666666.230108.peg.1375 CDS JH724260.1 2610155 2610697 2 + 543 FIG00405769: hypothetical protein - none -
fig|6666666.230108.peg.1376 CDS JH724260.1 2610711 2611385 3 + 675 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.230108.peg.1377 CDS JH724260.1 2611420 2612298 1 + 879 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.230108.peg.1378 CDS JH724260.1 2612385 2613083 3 + 699 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230108.peg.1379 CDS JH724260.1 2613208 2613801 1 + 594 MarC family integral membrane protein - none -
fig|6666666.230108.peg.1380 CDS JH724260.1 2615378 2613861 -2 - 1518 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1381 CDS JH724260.1 2618149 2615396 -1 - 2754 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.230108.peg.1382 CDS JH724260.1 2619086 2618895 -2 - 192 hypothetical protein - none -
fig|6666666.230108.peg.1383 CDS JH724260.1 2619663 2619073 -3 - 591 FIG00405000: hypothetical protein - none -
fig|6666666.230108.peg.1384 CDS JH724260.1 2620158 2620559 3 + 402 ATPase - none -
fig|6666666.230108.peg.1385 CDS JH724260.1 2620516 2620644 1 + 129 hypothetical protein - none -
fig|6666666.230108.peg.1386 CDS JH724260.1 2622253 2620793 -1 - 1461 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1387 CDS JH724260.1 2625187 2622272 -1 - 2916 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1388 CDS JH724260.1 2626203 2626012 -3 - 192 hypothetical protein - none -
fig|6666666.230108.peg.1389 CDS JH724260.1 2626780 2626190 -1 - 591 FIG00405000: hypothetical protein - none -
fig|6666666.230108.peg.1390 CDS JH724260.1 2628830 2627184 -2 - 1647 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1391 CDS JH724260.1 2631843 2628859 -3 - 2985 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.1392 CDS JH724260.1 2632294 2633193 1 + 900 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.230108.peg.1393 CDS JH724260.1 34411 32276 -1 - 2136 Vacuolar processing enzyme precursor (EC 3.4.22.-) - none -
fig|6666666.230108.peg.1394 CDS JH724260.1 35327 34392 -2 - 936 hypothetical protein - none -
fig|6666666.230108.peg.1395 CDS JH724260.1 35961 35413 -3 - 549 hypothetical protein - none -
fig|6666666.230108.peg.1396 CDS JH724260.1 36021 37001 3 + 981 Mobile element protein - none -
fig|6666666.230108.peg.1397 CDS JH724260.1 37135 38391 1 + 1257 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.230108.peg.1398 CDS JH724260.1 38450 39973 2 + 1524 conserved domain protein - none -
fig|6666666.230108.peg.1399 CDS JH724260.1 39998 40792 2 + 795 putative protein Ymh - none -
fig|6666666.230108.peg.1400 CDS JH724260.1 41131 40865 -1 - 267 hypothetical protein - none -
fig|6666666.230108.peg.1401 CDS JH724260.1 41922 41134 -3 - 789 Conjugative transposon protein TraD Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1402 CDS JH724260.1 42344 41925 -2 - 420 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1403 CDS JH724260.1 43104 42352 -3 - 753 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1404 CDS JH724260.1 43714 44172 1 + 459 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1405 CDS JH724260.1 44174 45427 2 + 1254 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1406 CDS JH724260.1 45462 46385 3 + 924 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1407 CDS JH724260.1 47082 48674 3 + 1593 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) Group II intron-associated genes
fig|6666666.230108.peg.1408 CDS JH724260.1 49066 49902 1 + 837 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1409 CDS JH724260.1 49941 50069 3 + 129 hypothetical protein - none -
fig|6666666.230108.peg.1410 CDS JH724260.1 50119 50382 1 + 264 hypothetical protein - none -
fig|6666666.230108.peg.1411 CDS JH724260.1 50394 50648 3 + 255 hypothetical protein - none -
fig|6666666.230108.peg.1412 CDS JH724260.1 50659 51147 1 + 489 hypothetical protein - none -
fig|6666666.230108.peg.1413 CDS JH724260.1 51166 51456 1 + 291 hypothetical protein - none -
fig|6666666.230108.peg.1414 CDS JH724260.1 52779 51568 -3 - 1212 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.230108.peg.1415 CDS JH724260.1 53456 53274 -2 - 183 hypothetical protein - none -
fig|6666666.230108.peg.1416 CDS JH724260.1 53594 55360 2 + 1767 hypothetical protein - none -
fig|6666666.230108.peg.1417 CDS JH724260.1 55403 55666 2 + 264 hypothetical protein - none -
fig|6666666.230108.peg.1418 CDS JH724260.1 55763 57859 2 + 2097 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.230108.peg.1419 CDS JH724260.1 58060 58296 1 + 237 hypothetical protein - none -
fig|6666666.230108.peg.1420 CDS JH724260.1 58617 58468 -3 - 150 hypothetical protein - none -
fig|6666666.230108.peg.1421 CDS JH724260.1 58780 58652 -1 - 129 hypothetical protein - none -
fig|6666666.230108.peg.1422 CDS JH724260.1 58740 58877 3 + 138 hypothetical protein - none -
fig|6666666.230108.peg.1423 CDS JH724260.1 58914 59891 3 + 978 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.230108.peg.1424 CDS JH724260.1 59917 60117 1 + 201 FIG00408893: hypothetical protein - none -
fig|6666666.230108.peg.1425 CDS JH724260.1 60124 60288 1 + 165 hypothetical protein - none -
fig|6666666.230108.peg.1426 CDS JH724260.1 60327 61235 3 + 909 hypothetical protein - none -
fig|6666666.230108.peg.1427 CDS JH724260.1 61242 61961 3 + 720 hypothetical protein - none -
fig|6666666.230108.peg.1428 CDS JH724260.1 61958 62746 2 + 789 ThiF family protein, ubiquitin-activating enzyme - none -
fig|6666666.230108.peg.1429 CDS JH724260.1 63352 64566 1 + 1215 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.230108.peg.1430 CDS JH724260.1 64582 65472 1 + 891 hypothetical protein - none -
fig|6666666.230108.peg.1431 CDS JH724260.1 65456 66532 2 + 1077 hypothetical protein - none -
fig|6666666.230108.peg.1432 CDS JH724260.1 66653 68287 2 + 1635 hypothetical protein - none -
fig|6666666.230108.peg.1433 CDS JH724260.1 68467 70032 1 + 1566 hypothetical protein - none -
fig|6666666.230108.peg.1434 CDS JH724260.1 70198 70512 1 + 315 hypothetical protein - none -
fig|6666666.230108.peg.1435 CDS JH724260.1 70577 70783 2 + 207 hypothetical protein - none -
fig|6666666.230108.peg.1436 CDS JH724260.1 70802 71026 2 + 225 hypothetical protein - none -
fig|6666666.230108.peg.1437 CDS JH724260.1 71023 72063 1 + 1041 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) Group II intron-associated genes
fig|6666666.230108.peg.1438 CDS JH724260.1 72060 72536 3 + 477 hypothetical protein - none -
fig|6666666.230108.peg.1439 CDS JH724260.1 72538 74889 1 + 2352 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.1440 CDS JH724260.1 74864 76177 2 + 1314 RteB, two-component system response regulator - none -
fig|6666666.230108.peg.1441 CDS JH724260.1 76529 76945 2 + 417 hypothetical protein - none -
fig|6666666.230108.peg.1442 CDS JH724260.1 77163 77468 3 + 306 hypothetical protein - none -
fig|6666666.230108.peg.1443 CDS JH724260.1 77488 77784 1 + 297 hypothetical protein - none -
fig|6666666.230108.peg.1444 CDS JH724260.1 77781 78092 3 + 312 FIG00406484: hypothetical protein - none -
fig|6666666.230108.peg.1445 CDS JH724260.1 79460 78159 -2 - 1302 transposase - none -
fig|6666666.230108.peg.1446 CDS JH724260.1 80707 79484 -1 - 1224 Tyrosine type site-specific recombinase - none -
fig|6666666.230108.peg.1447 CDS JH724260.1 80792 80965 2 + 174 hypothetical protein - none -
fig|6666666.230108.peg.1448 CDS JH724260.1 2634185 2634601 2 + 417 transposase - none -
fig|6666666.230108.peg.1449 CDS JH724260.1 2634757 2635143 1 + 387 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.230108.peg.1450 CDS JH724260.1 2635679 2635882 2 + 204 hypothetical protein - none -
fig|6666666.230108.peg.1451 CDS JH724260.1 2635936 2636160 1 + 225 hypothetical protein - none -
fig|6666666.230108.peg.1452 CDS JH724260.1 2636224 2636421 1 + 198 hypothetical protein - none -
fig|6666666.230108.peg.1453 CDS JH724260.1 2638067 2636574 -2 - 1494 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1454 CDS JH724260.1 2641064 2638086 -2 - 2979 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.1455 CDS JH724260.1 2641455 2641339 -3 - 117 hypothetical protein - none -
fig|6666666.230108.peg.1456 CDS JH724260.1 2641758 2643077 3 + 1320 archaeal ATPase, fused to C-terminal DUF234 domain - none -
fig|6666666.230108.peg.1457 CDS JH724260.1 2645000 2643402 -2 - 1599 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1458 CDS JH724260.1 2647894 2645021 -1 - 2874 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1459 CDS JH724260.1 2648504 2648355 -2 - 150 hypothetical protein - none -
fig|6666666.230108.peg.1460 CDS JH724260.1 2648609 2648728 2 + 120 hypothetical protein - none -
fig|6666666.230108.peg.1461 CDS JH724260.1 2650013 2648823 -2 - 1191 Integrase - none -
fig|6666666.230108.peg.1462 CDS JH724260.1 2650704 2653679 3 + 2976 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1463 CDS JH724260.1 2653699 2655333 1 + 1635 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1464 CDS JH724260.1 2655365 2656141 2 + 777 FIG00405392: hypothetical protein - none -
fig|6666666.230108.peg.1465 CDS JH724260.1 2656329 2657585 3 + 1257 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.230108.peg.1466 CDS JH724260.1 2657694 2659685 3 + 1992 FIG00898950: hypothetical protein - none -
fig|6666666.230108.peg.1467 CDS JH724260.1 2659818 2661458 3 + 1641 Fumarate hydratase class I, anaerobic (EC 4.2.1.2) Serine-glyoxylate cycle
fig|6666666.230108.peg.1468 CDS JH724260.1 2661830 2662465 2 + 636 Integral membrane protein - none -
fig|6666666.230108.peg.1469 CDS JH724260.1 2662493 2662987 2 + 495 Integral membrane protein - none -
fig|6666666.230108.peg.1470 CDS JH724260.1 2664675 2663035 -3 - 1641 Amino acid permease - none -
fig|6666666.230108.peg.1471 CDS JH724260.1 2666049 2664724 -3 - 1326 Agglutination protein - none -
fig|6666666.230108.peg.1472 CDS JH724260.1 2669078 2666046 -2 - 3033 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.230108.peg.1473 CDS JH724260.1 2670201 2669119 -3 - 1083 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.230108.peg.1474 CDS JH724260.1 2671132 2670323 -1 - 810 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.230108.peg.1475 CDS JH724260.1 2671874 2671362 -2 - 513 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.230108.peg.1476 CDS JH724260.1 2672746 2672036 -1 - 711 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.230108.peg.1477 CDS JH724260.1 2673345 2672830 -3 - 516 FIG00897869: hypothetical protein - none -
fig|6666666.230108.peg.1478 CDS JH724260.1 2674306 2673368 -1 - 939 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.230108.peg.1479 CDS JH724260.1 2676917 2674395 -2 - 2523 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.230108.peg.1480 CDS JH724260.1 2678554 2677181 -1 - 1374 DNA-damage-inducible protein F - none -
fig|6666666.230108.peg.1481 CDS JH724260.1 2678698 2679378 1 + 681 TPR-domain containing protein - none -
fig|6666666.230108.peg.1482 CDS JH724260.1 2683288 2679419 -1 - 3870 DNA-binding response regulator, AraC family - none -
fig|6666666.230108.peg.1483 CDS JH724260.1 2684755 2684504 -1 - 252 DNA-binding response regulator, AraC family - none -
fig|6666666.230108.peg.1484 CDS JH724260.1 2684806 2686479 1 + 1674 FIG00405830: hypothetical protein - none -
fig|6666666.230108.peg.1485 CDS JH724260.1 2686502 2687539 2 + 1038 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1486 CDS JH724260.1 2689294 2691294 1 + 2001 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.1487 CDS JH724260.1 2691308 2692969 2 + 1662 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1488 CDS JH724260.1 2693088 2694695 3 + 1608 putative xylanase - none -
fig|6666666.230108.peg.1489 CDS JH724260.1 2694726 2697173 3 + 2448 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.1490 CDS JH724260.1 2698068 2697295 -3 - 774 Biotin--protein ligase (EC 6.3.4.9, EC 6.3.4.10, EC 6.3.4.11, EC 6.3.4.15) - none -
fig|6666666.230108.peg.1491 CDS JH724260.1 2698408 2698052 -1 - 357 FIG00898592: hypothetical protein - none -
fig|6666666.230108.peg.1492 CDS JH724260.1 2698843 2698478 -1 - 366 Endonuclease (EC 3.1.-.-) - none -
fig|6666666.230108.peg.1493 CDS JH724260.1 2700615 2698843 -3 - 1773 Carboxyl-terminal protease - none -
fig|6666666.230108.peg.1494 CDS JH724260.1 2700715 2701029 1 + 315 FIG00406074: hypothetical protein - none -
fig|6666666.230108.peg.1495 CDS JH724260.1 2701049 2701489 2 + 441 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing
fig|6666666.230108.peg.1496 CDS JH724260.1 2701813 2701514 -1 - 300 FIG00405557: hypothetical protein - none -
fig|6666666.230108.peg.1497 CDS JH724260.1 2702588 2701881 -2 - 708 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230108.peg.1498 CDS JH724260.1 2703288 2702602 -3 - 687 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230108.peg.1499 CDS JH724260.1 2703459 2707256 3 + 3798 DNA polymerase III alpha subunit (EC 2.7.7.7) CBSS-350688.3.peg.1509;
Phage replication
fig|6666666.230108.peg.1500 CDS JH724260.1 2707423 2707737 1 + 315 Thioredoxin CBSS-315749.4.peg.3658
fig|6666666.230108.peg.1501 CDS JH724260.1 2707849 2708181 1 + 333 FIG00403617: hypothetical protein - none -
fig|6666666.230108.peg.1502 CDS JH724260.1 2708461 2708243 -1 - 219 FIG00406966: hypothetical protein - none -
fig|6666666.230108.peg.1503 CDS JH724260.1 2708926 2708501 -1 - 426 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA YjeE
fig|6666666.230108.peg.1504 CDS JH724260.1 2709752 2708940 -2 - 813 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.230108.peg.1505 CDS JH724260.1 2710231 2709803 -1 - 429 FIG00935916: hypothetical protein - none -
fig|6666666.230108.peg.1506 CDS JH724260.1 2711802 2710486 -3 - 1317 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.230108.peg.1507 CDS JH724260.1 2711980 2712369 1 + 390 FIG00413250: hypothetical protein - none -
fig|6666666.230108.peg.1508 CDS JH724260.1 2712983 2712375 -2 - 609 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.230108.peg.1509 CDS JH724260.1 2713974 2712967 -3 - 1008 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.230108.peg.1510 CDS JH724260.1 2715576 2713978 -3 - 1599 Predicted cobalt transporter in Bacteroides_Porphyromonas Coenzyme B12 biosynthesis
fig|6666666.230108.peg.1511 CDS JH724260.1 2719029 2715757 -3 - 3273 putative Tricorn-like protease - none -
fig|6666666.230108.peg.1512 CDS JH724260.1 2719885 2719106 -1 - 780 DnaJ-like protein DjlA - none -
fig|6666666.230108.peg.1513 CDS JH724260.1 2720685 2720020 -3 - 666 Flavodoxin Flavodoxin
fig|6666666.230108.peg.1514 CDS JH724260.1 2721189 2720707 -3 - 483 Transcriptional regulator - none -
fig|6666666.230108.peg.1515 CDS JH724260.1 2722890 2721199 -3 - 1692 Dienelactone hydrolase and related enzymes - none -
fig|6666666.230108.peg.1516 CDS JH724260.1 2723054 2723956 2 + 903 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.1517 CDS JH724260.1 2724396 2725688 3 + 1293 Tyrosine type site-specific recombinase - none -
fig|6666666.230108.peg.1518 CDS JH724260.1 2725695 2726489 3 + 795 hypothetical protein - none -
fig|6666666.230108.peg.1519 CDS JH724260.1 2726637 2726960 3 + 324 hypothetical protein - none -
fig|6666666.230108.peg.1520 CDS JH724260.1 2727012 2728016 3 + 1005 FIG00898211: hypothetical protein - none -
fig|6666666.230108.peg.1521 CDS JH724260.1 2728157 2728270 2 + 114 hypothetical protein - none -
fig|6666666.230108.peg.1522 CDS JH724260.1 2728760 2729413 2 + 654 hypothetical protein - none -
fig|6666666.230108.peg.1523 CDS JH724260.1 2730791 2730018 -2 - 774 FIG00417123: hypothetical protein - none -
fig|6666666.230108.peg.1524 CDS JH724260.1 2731141 2731671 1 + 531 FIG00414200: hypothetical protein - none -
fig|6666666.230108.peg.1525 CDS JH724260.1 2732784 2731723 -3 - 1062 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.230108.peg.1526 CDS JH724260.1 2732820 2732978 3 + 159 hypothetical protein - none -
fig|6666666.230108.peg.1527 CDS JH724260.1 2732983 2733405 1 + 423 FIG00404342: hypothetical protein - none -
fig|6666666.230108.peg.1528 CDS JH724260.1 2733513 2736437 3 + 2925 FIG00897756: hypothetical protein - none -
fig|6666666.230108.peg.1529 CDS JH724260.1 2736708 2738147 3 + 1440 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230108.peg.1530 CDS JH724260.1 2738741 2738208 -2 - 534 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-226186.1.peg.3978;
CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.230108.peg.1531 CDS JH724260.1 2739511 2738732 -1 - 780 FIG032012: hypothetical protein CBSS-226186.1.peg.3978
fig|6666666.230108.peg.1532 CDS JH724260.1 2740216 2739530 -1 - 687 FIG036016: hypothetical protein CBSS-226186.1.peg.3978
fig|6666666.230108.peg.1533 CDS JH724260.1 2740474 2741730 1 + 1257 RecD-like DNA helicase Atu2026 - none -
fig|6666666.230108.peg.1534 CDS JH724260.1 2741807 2742616 2 + 810 FIG00410196: hypothetical protein - none -
fig|6666666.230108.peg.1535 CDS JH724260.1 2745688 2743070 -1 - 2619 Alanyl-tRNA synthetase (EC 6.1.1.7) CBSS-226186.1.peg.3994;
Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.230108.peg.1536 CDS JH724260.1 2745860 2746828 2 + 969 Peptidase, family M23 (EC 3.4.24.-) CBSS-226186.1.peg.3994
fig|6666666.230108.peg.1537 CDS JH724260.1 2746858 2747247 1 + 390 Transcriptional regulator - none -
fig|6666666.230108.peg.1538 CDS JH724260.1 2749523 2747265 -2 - 2259 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.230108.peg.1539 CDS JH724260.1 2750916 2749600 -3 - 1317 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Murein Hydrolases
fig|6666666.230108.peg.1540 CDS JH724260.1 2751727 2750948 -1 - 780 FIG00937393: hypothetical protein - none -
fig|6666666.230108.peg.1541 CDS JH724260.1 2752612 2751728 -1 - 885 Chromosome (plasmid) partitioning protein ParB Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.230108.peg.1542 CDS JH724260.1 2753490 2752720 -3 - 771 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.230108.peg.1543 CDS JH724260.1 2753954 2753838 -2 - 117 hypothetical protein - none -
fig|6666666.230108.peg.1544 CDS JH724260.1 2754385 2753912 -1 - 474 probable membrane protein NMA1128 - none -
fig|6666666.230108.peg.1545 CDS JH724260.1 2755867 2754431 -1 - 1437 FIG00897336: hypothetical protein - none -
fig|6666666.230108.peg.1546 CDS JH724260.1 2755874 2755993 2 + 120 hypothetical protein - none -
fig|6666666.230108.peg.1547 CDS JH724260.1 2756025 2756789 3 + 765 5-nucleotidase SurE (EC 3.1.3.5) Housecleaning nucleoside triphosphate pyrophosphatases;
Stationary phase repair cluster
fig|6666666.230108.peg.1548 CDS JH724260.1 2756814 2757959 3 + 1146 Lipid-A-disaccharide synthase (EC 2.4.1.182) Llipid A biosynthesis cluster
fig|6666666.230108.peg.1549 CDS JH724260.1 2758006 2758125 1 + 120 hypothetical protein - none -
fig|6666666.230108.peg.1550 CDS JH724260.1 2758103 2758807 2 + 705 FIG00411266: hypothetical protein - none -
fig|6666666.230108.peg.1551 CDS JH724260.1 2759767 2758925 -1 - 843 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230108.peg.1552 CDS JH724260.1 2761769 2759757 -2 - 2013 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.230108.peg.1553 CDS JH724260.1 2762138 2761779 -2 - 360 Ribosomal silencing factor RsfA (former Iojap) - none -
fig|6666666.230108.peg.1554 CDS JH724260.1 2762609 2763787 2 + 1179 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.230108.peg.1555 CDS JH724260.1 2765725 2763872 -1 - 1854 FIG00896368: hypothetical protein - none -
fig|6666666.230108.peg.1556 CDS JH724260.1 2767189 2765843 -1 - 1347 Magnesium transporter - none -
fig|6666666.230108.peg.1557 CDS JH724260.1 2768010 2767216 -3 - 795 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) ECSIG4-SIG7;
RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.230108.peg.1558 CDS JH724260.1 2768146 2769132 1 + 987 putative dolichol-P-glucose synthetase - none -
fig|6666666.230108.peg.1559 CDS JH724260.1 2769503 2770960 2 + 1458 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.230108.peg.1560 CDS JH724260.1 2771692 2777559 1 + 5868 FIG00403134: hypothetical protein - none -
fig|6666666.230108.peg.1561 CDS JH724260.1 2777701 2778774 1 + 1074 FIG00897161: hypothetical protein - none -
fig|6666666.230108.peg.1562 CDS JH724260.1 2778831 2779934 3 + 1104 putative periplasmic protein kinase ArgK and related GTPases of G3E family G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.230108.peg.1563 CDS JH724260.1 2779959 2780543 3 + 585 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230108.peg.1564 CDS JH724260.1 2781471 2780560 -3 - 912 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.230108.peg.1565 CDS JH724260.1 2783164 2783994 1 + 831 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230108.peg.1566 CDS JH724260.1 2784006 2785019 3 + 1014 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230108.peg.1567 CDS JH724260.1 2785047 2786324 3 + 1278 Small-conductance mechanosensitive channel - none -
fig|6666666.230108.peg.1568 CDS JH724260.1 2786526 2786401 -3 - 126 hypothetical protein - none -
fig|6666666.230108.peg.1569 CDS JH724260.1 2786660 2787085 2 + 426 FIG00410367: hypothetical protein - none -
fig|6666666.230108.peg.1570 CDS JH724260.1 2788387 2787206 -1 - 1182 FIG00403577: hypothetical protein - none -
fig|6666666.230108.peg.1571 CDS JH724260.1 2791210 2788505 -1 - 2706 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.1572 CDS JH724260.1 2791406 2794228 2 + 2823 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.1573 CDS JH724260.1 2795803 2794364 -1 - 1440 NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230108.peg.1574 CDS JH724260.1 2797409 2795925 -2 - 1485 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230108.peg.1575 CDS JH724260.1 2799374 2797461 -2 - 1914 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230108.peg.1576 CDS JH724260.1 2799732 2799433 -3 - 300 NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230108.peg.1577 CDS JH724260.1 2800259 2799747 -2 - 513 NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230108.peg.1578 CDS JH724260.1 2800793 2800290 -2 - 504 NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230108.peg.1579 CDS JH724260.1 2801936 2800851 -2 - 1086 NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230108.peg.1580 CDS JH724260.1 2801892 2802026 3 + 135 hypothetical protein - none -
fig|6666666.230108.peg.1581 CDS JH724260.1 2803657 2802068 -1 - 1590 NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
NADH ubiquinone oxidoreductase;
Respiratory Complex I;
Respiratory Complex I
fig|6666666.230108.peg.1582 CDS JH724260.1 2804254 2803673 -1 - 582 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230108.peg.1583 CDS JH724260.1 2804595 2804245 -3 - 351 NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) NADH ubiquinone oxidoreductase;
Respiratory Complex I
fig|6666666.230108.peg.1584 CDS JH724260.1 2805078 2804707 -3 - 372 hypothetical protein - none -
fig|6666666.230108.peg.1585 CDS JH724260.1 2806633 2805182 -1 - 1452 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.230108.peg.1586 CDS JH724260.1 2807995 2806655 -1 - 1341 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.230108.peg.1587 CDS JH724260.1 2810089 2808062 -1 - 2028 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.230108.peg.1588 CDS JH724260.1 2810528 2811634 2 + 1107 FIG00410004: hypothetical protein - none -
fig|6666666.230108.peg.1589 CDS JH724260.1 2811840 2812793 3 + 954 FIG00404313: hypothetical protein - none -
fig|6666666.230108.peg.1590 CDS JH724260.1 2812769 2815285 2 + 2517 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) / Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
Pyruvate Alanine Serine Interconversions
fig|6666666.230108.peg.1591 CDS JH724260.1 2815397 2815612 2 + 216 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.230108.peg.1592 CDS JH724260.1 2815798 2816619 1 + 822 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.230108.peg.1593 CDS JH724260.1 2816616 2820050 3 + 3435 DNA helicase - none -
fig|6666666.230108.peg.1594 CDS JH724260.1 2821832 2820372 -2 - 1461 Hexuronate transporter D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230108.peg.1595 CDS JH724260.1 2822960 2822004 -2 - 957 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230108.peg.1596 CDS JH724260.1 2824379 2822988 -2 - 1392 PTS system, galactitol-specific IIC component (EC 2.7.1.69) - none -
fig|6666666.230108.peg.1597 CDS JH724260.1 2824847 2825413 2 + 567 RNA polymerase sigma-70 factor Transcription initiation, bacterial sigma factors
fig|6666666.230108.peg.1598 CDS JH724260.1 2825518 2826693 1 + 1176 putative anti-sigma factor - none -
fig|6666666.230108.peg.1599 CDS JH724260.1 2826760 2830068 1 + 3309 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.230108.peg.1600 CDS JH724260.1 2830089 2831555 3 + 1467 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1601 CDS JH724260.1 2831574 2832737 3 + 1164 Protein-tyrosine-phosphatase (EC 3.1.3.48) - none -
fig|6666666.230108.peg.1602 CDS JH724260.1 2833544 2832891 -2 - 654 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.230108.peg.1603 CDS JH724260.1 2833760 2833897 2 + 138 hypothetical protein - none -
fig|6666666.230108.peg.1604 CDS JH724260.1 2833906 2834763 1 + 858 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.230108.peg.1605 CDS JH724260.1 2834763 2835467 3 + 705 Tetrapyrrole methylase family protein - none -
fig|6666666.230108.peg.1606 CDS JH724260.1 2836551 2835433 -3 - 1119 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions
fig|6666666.230108.peg.1607 CDS JH724260.1 2837479 2836598 -1 - 882 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.230108.peg.1608 CDS JH724260.1 2839692 2837479 -3 - 2214 Dipeptidyl peptidase IV - none -
fig|6666666.230108.peg.1609 CDS JH724260.1 2840655 2839894 -3 - 762 UPF0309 protein SCO4393 - none -
fig|6666666.230108.peg.1610 CDS JH724260.1 2841838 2840687 -1 - 1152 FIG00406514: hypothetical protein - none -
fig|6666666.230108.peg.1611 CDS JH724260.1 2842790 2841831 -2 - 960 Glucokinase (EC 2.7.1.2) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.230108.peg.1612 CDS JH724260.1 2843106 2844035 3 + 930 COG1242: Predicted Fe-S oxidoreductase - none -
fig|6666666.230108.peg.1613 CDS JH724260.1 2844162 2844046 -3 - 117 hypothetical protein - none -
fig|6666666.230108.peg.1614 CDS JH724260.1 2844097 2845296 1 + 1200 Alkyldihydroxyacetonephosphate synthase (EC 2.5.1.26) - none -
fig|6666666.230108.peg.1615 CDS JH724260.1 2845340 2846152 2 + 813 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Sialic Acid Metabolism
fig|6666666.230108.peg.1616 CDS JH724260.1 2846618 2848183 2 + 1566 FIG00417169: hypothetical protein - none -
fig|6666666.230108.peg.1617 CDS JH724260.1 2848331 2849347 2 + 1017 hypothetical protein - none -
fig|6666666.230108.peg.1618 CDS JH724260.1 2849691 2850758 3 + 1068 FIG00898411: hypothetical protein - none -
fig|6666666.230108.peg.1619 CDS JH724260.1 2851029 2851268 3 + 240 hypothetical protein - none -
fig|6666666.230108.peg.1620 CDS JH724260.1 2851667 2852707 2 + 1041 hypothetical protein - none -
fig|6666666.230108.peg.1621 CDS JH724260.1 2852794 2853582 1 + 789 FIG00899164: hypothetical protein - none -
fig|6666666.230108.peg.1622 CDS JH724260.1 2853595 2854485 1 + 891 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.230108.peg.1623 CDS JH724260.1 2854487 2856406 2 + 1920 FIG00403120: hypothetical protein - none -
fig|6666666.230108.peg.1624 CDS JH724260.1 2856451 2858409 1 + 1959 FIG00403120: hypothetical protein - none -
fig|6666666.230108.peg.1625 CDS JH724260.1 2858444 2860126 2 + 1683 FIG00896341: hypothetical protein - none -
fig|6666666.230108.peg.1626 CDS JH724260.1 2860251 2861324 3 + 1074 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.230108.peg.1627 CDS JH724260.1 2861395 2864454 1 + 3060 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA Cobalt-zinc-cadmium resistance;
Cobalt-zinc-cadmium resistance
fig|6666666.230108.peg.1628 CDS JH724260.1 2864451 2865923 3 + 1473 outer membrane protein TolC, putative - none -
fig|6666666.230108.peg.1629 CDS JH724260.1 2865923 2869129 2 + 3207 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.230108.peg.1630 CDS JH724260.1 2869178 2869828 2 + 651 FIG00415953: hypothetical protein - none -
fig|6666666.230108.peg.1631 CDS JH724260.1 2870459 2870632 2 + 174 hypothetical protein - none -
fig|6666666.230108.peg.1632 CDS JH724260.1 2870629 2872323 1 + 1695 FIG00414546: hypothetical protein - none -
fig|6666666.230108.peg.1633 CDS JH724260.1 2872578 2872438 -3 - 141 hypothetical protein - none -
fig|6666666.230108.peg.1634 CDS JH724260.1 2872577 2872879 2 + 303 hypothetical protein - none -
fig|6666666.230108.peg.1635 CDS JH724260.1 2872898 2873977 2 + 1080 FIG00408819: hypothetical protein - none -
fig|6666666.230108.peg.1636 CDS JH724260.1 2874000 2874992 3 + 993 FIG00415953: hypothetical protein - none -
fig|6666666.230108.peg.1637 CDS JH724260.1 2875437 2876765 3 + 1329 FIG00411283: hypothetical protein - none -
fig|6666666.230108.peg.1638 CDS JH724260.1 2876769 2878220 3 + 1452 putative Fe-S oxidoreductase - none -
fig|6666666.230108.peg.1639 CDS JH724260.1 2878241 2879476 2 + 1236 FIG00414945: hypothetical protein - none -
fig|6666666.230108.peg.1640 CDS JH724260.1 2879747 2881681 2 + 1935 ABC transporter ATP-binding protein - none -
fig|6666666.230108.peg.1641 CDS JH724260.1 2881685 2882995 2 + 1311 putative hemolysin secretion protein - none -
fig|6666666.230108.peg.1642 CDS JH724260.1 2883101 2883949 2 + 849 serine/threonine kinase - none -
fig|6666666.230108.peg.1643 CDS JH724260.1 2884008 2885213 3 + 1206 FIG00403110: hypothetical protein - none -
fig|6666666.230108.peg.1644 CDS JH724260.1 2886240 2885218 -3 - 1023 membrane protein, putative - none -
fig|6666666.230108.peg.1645 CDS JH724260.1 2886994 2886317 -1 - 678 Hypothetical YciO protein, TsaC/YrdC paralog - none -
fig|6666666.230108.peg.1646 CDS JH724260.1 2888742 2887000 -3 - 1743 putative helicase - none -
fig|6666666.230108.peg.1647 CDS JH724260.1 2889555 2888755 -3 - 801 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.230108.peg.1648 CDS JH724260.1 2889643 2890536 1 + 894 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.230108.peg.1649 CDS JH724260.1 2890533 2891147 3 + 615 FIG00415643: hypothetical protein - none -
fig|6666666.230108.peg.1650 CDS JH724260.1 2891233 2892402 1 + 1170 Cystathionine beta-lyase, Bsu PatB (EC 4.4.1.8) - none -
fig|6666666.230108.peg.1651 CDS JH724260.1 2892389 2894062 2 + 1674 FIG00414760: hypothetical protein - none -
fig|6666666.230108.peg.1652 CDS JH724260.1 2894232 2896640 3 + 2409 FIG00409332: hypothetical protein - none -
fig|6666666.230108.peg.1653 CDS JH724260.1 2896729 2899323 1 + 2595 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.1654 CDS JH724260.1 2899521 2900477 3 + 957 Membrane protease subunits, stomatin/prohibitin homologs - none -
fig|6666666.230108.peg.1655 CDS JH724260.1 2900610 2901848 3 + 1239 Hydrolase (HAD superfamily) - none -
fig|6666666.230108.peg.1656 CDS JH724260.1 2901915 2902124 3 + 210 FIG00418171: hypothetical protein - none -
fig|6666666.230108.peg.1657 CDS JH724260.1 2902150 2902326 1 + 177 hypothetical protein - none -
fig|6666666.230108.peg.1658 CDS JH724260.1 2902438 2903820 1 + 1383 FIG00896529: hypothetical protein - none -
fig|6666666.230108.peg.1659 CDS JH724260.1 2903850 2905001 3 + 1152 FIG00405865: hypothetical protein - none -
fig|6666666.230108.peg.1660 CDS JH724260.1 2905108 2906544 1 + 1437 Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites - none -
fig|6666666.230108.peg.1661 CDS JH724260.1 2906574 2907785 3 + 1212 FIG00897404: hypothetical protein - none -
fig|6666666.230108.peg.1662 CDS JH724260.1 2907810 2908526 3 + 717 FIG00896915: hypothetical protein - none -
fig|6666666.230108.peg.1663 CDS JH724260.1 2908580 2909746 2 + 1167 RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein - none -
fig|6666666.230108.peg.1664 CDS JH724260.1 2910051 2911826 3 + 1776 Putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes
fig|6666666.230108.peg.1665 CDS JH724260.1 2912935 2912321 -1 - 615 Transcriptional regulator - none -
fig|6666666.230108.peg.1666 CDS JH724260.1 2913629 2912925 -2 - 705 FIG00898025: hypothetical protein - none -
fig|6666666.230108.peg.1667 CDS JH724260.1 2913819 2914202 3 + 384 Transcriptional repressor, BlaI/MecI family - none -
fig|6666666.230108.peg.1668 CDS JH724260.1 2914232 2916097 2 + 1866 Thiol:disulfide interchange protein tlpA - none -
fig|6666666.230108.peg.1669 CDS JH724260.1 2916141 2918222 3 + 2082 Regulatory sensor-transducer, BlaR1/MecR1 family / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.1670 CDS JH724260.1 2918235 2919005 3 + 771 Thiol:disulfide oxidoreductase related to ResA Biogenesis of c-type cytochromes
fig|6666666.230108.peg.1671 CDS JH724260.1 2919107 2920345 2 + 1239 FIG00407219: hypothetical protein - none -
fig|6666666.230108.peg.1672 CDS JH724260.1 2921226 2920321 -3 - 906 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.230108.peg.1673 CDS JH724260.1 2921889 2921335 -3 - 555 FIG00897033: hypothetical protein - none -
fig|6666666.230108.peg.1674 CDS JH724260.1 2922714 2921938 -3 - 777 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) Llipid A biosynthesis cluster
fig|6666666.230108.peg.1675 CDS JH724260.1 2924237 2922852 -2 - 1386 N-acetylglucosamine deacetylase (EC 3.5.1.-) / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.230108.peg.1676 CDS JH724260.1 2925281 2924241 -2 - 1041 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.191) - none -
fig|6666666.230108.peg.1677 CDS JH724260.1 2926592 2925366 -2 - 1227 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.230108.peg.1678 CDS JH724260.1 2927429 2926599 -2 - 831 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.230108.peg.1679 CDS JH724260.1 2928576 2927464 -3 - 1113 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.230108.peg.1680 CDS JH724260.1 2929732 2928581 -1 - 1152 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.230108.peg.1681 CDS JH724260.1 2930360 2929863 -2 - 498 LemA family protein - none -
fig|6666666.230108.peg.1682 CDS JH724260.1 2931524 2930616 -2 - 909 Beta-propeller domains of methanol dehydrogenase type - none -
fig|6666666.230108.peg.1683 CDS JH724260.1 2932560 2931565 -3 - 996 Hydrolases of the alpha/beta superfamily - none -
fig|6666666.230108.peg.1684 CDS JH724260.1 2933306 2932560 -2 - 747 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.230108.peg.1685 CDS JH724260.1 2933909 2933355 -2 - 555 FIG00406579: hypothetical protein - none -
fig|6666666.230108.peg.1686 CDS JH724260.1 2934678 2933941 -3 - 738 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) - none -
fig|6666666.230108.peg.1687 CDS JH724260.1 2935620 2934679 -3 - 942 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.230108.peg.1688 CDS JH724260.1 2936648 2935647 -2 - 1002 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.230108.peg.1689 CDS JH724260.1 2937377 2936658 -2 - 720 Cell wall endopeptidase, family M23/M37 - none -
fig|6666666.230108.peg.1690 CDS JH724260.1 2938043 2937378 -2 - 666 FIG00935912: hypothetical protein - none -
fig|6666666.230108.peg.1691 CDS JH724260.1 2938870 2938043 -1 - 828 COG1496: Uncharacterized conserved protein - none -
fig|6666666.230108.peg.1692 CDS JH724260.1 2939973 2938867 -3 - 1107 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.230108.peg.1693 CDS JH724260.1 2940635 2940063 -2 - 573 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.230108.peg.1694 CDS JH724260.1 2941214 2940678 -2 - 537 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.230108.peg.1695 CDS JH724260.1 2943665 2942463 -2 - 1203 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.1696 CDS JH724260.1 2943988 2945070 1 + 1083 FIG00938776: hypothetical protein - none -
fig|6666666.230108.peg.1697 CDS JH724260.1 2945072 2946493 2 + 1422 FIG00938560: hypothetical protein - none -
fig|6666666.230108.peg.1698 CDS JH724260.1 2946500 2947900 2 + 1401 D-xylose proton-symporter XylE Xylose utilization
fig|6666666.230108.peg.1699 CDS JH724260.1 2947933 2949105 1 + 1173 N-acylglucosamine 2-epimerase (EC 5.1.3.8) Sialic Acid Metabolism
fig|6666666.230108.peg.1700 CDS JH724260.1 2949117 2950031 3 + 915 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.230108.peg.1701 CDS JH724260.1 2950052 2951116 2 + 1065 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230108.peg.1702 CDS JH724260.1 2951113 2952537 1 + 1425 Sialic acid-specific 9-O-acetylesterase - none -
fig|6666666.230108.peg.1703 CDS JH724260.1 2952534 2952683 3 + 150 hypothetical protein - none -
fig|6666666.230108.peg.1704 CDS JH724260.1 2953377 2953616 3 + 240 transposase - none -
fig|6666666.230108.peg.1705 CDS JH724260.1 2954420 2953716 -2 - 705 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.1706 CDS JH724260.1 2954439 2955827 3 + 1389 hypothetical protein - none -
fig|6666666.230108.peg.1707 CDS JH724260.1 2955839 2957392 2 + 1554 FIG00897450: hypothetical protein - none -
fig|6666666.230108.peg.1708 CDS JH724260.1 2957402 2958412 2 + 1011 L-rhamnose-proton symporter - none -
fig|6666666.230108.peg.1709 CDS JH724260.1 2958437 2959993 2 + 1557 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230108.peg.1710 CDS JH724260.1 2960311 2963496 1 + 3186 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.1711 CDS JH724260.1 2963509 2965227 1 + 1719 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.230108.peg.1712 CDS JH724260.1 2965221 2966402 3 + 1182 hypothetical protein - none -
fig|6666666.230108.peg.1713 CDS JH724260.1 2966625 2968619 3 + 1995 Alpha-galactosidase precursor (EC 3.2.1.22) Galactosylceramide and Sulfatide metabolism
fig|6666666.230108.peg.1714 CDS JH724260.1 2968643 2969725 2 + 1083 hypothetical protein - none -
fig|6666666.230108.peg.1715 CDS JH724260.1 2969936 2971129 2 + 1194 Alpha-galactosidase precursor (EC 3.2.1.22) Galactosylceramide and Sulfatide metabolism
fig|6666666.230108.peg.1716 CDS JH724260.1 2971161 2973323 3 + 2163 Alpha-glucosidase SusB (EC 3.2.1.20) Cellulosome
fig|6666666.230108.peg.1717 CDS JH724260.1 2973450 2973971 3 + 522 hypothetical protein - none -
fig|6666666.230108.peg.1718 CDS JH724260.1 2975555 2974017 -2 - 1539 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.230108.peg.1719 CDS JH724260.1 2975945 2977456 2 + 1512 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.230108.peg.1720 CDS JH724260.1 2977486 2978049 1 + 564 hypothetical protein - none -
fig|6666666.230108.peg.1721 CDS JH724260.1 2978750 2978067 -2 - 684 FIG00937167: hypothetical protein - none -
fig|6666666.230108.peg.1722 CDS JH724260.1 2978871 2979623 3 + 753 tRNA pseudouridine synthase A (EC 4.2.1.70) Colicin V and Bacteriocin Production Cluster;
RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.230108.peg.1723 CDS JH724260.1 2979693 2980592 3 + 900 putative permease - none -
fig|6666666.230108.peg.1724 CDS JH724260.1 2980604 2981074 2 + 471 GAF domain-containing protein, involved in signal transduction - none -
fig|6666666.230108.peg.1725 CDS JH724260.1 2981071 2981730 1 + 660 FIG00408484: hypothetical protein - none -
fig|6666666.230108.peg.1726 CDS JH724260.1 2982607 2981717 -1 - 891 putative transporter - none -
fig|6666666.230108.peg.1727 CDS JH724260.1 2982740 2983105 2 + 366 FIG00406892: hypothetical protein - none -
fig|6666666.230108.peg.1728 CDS JH724260.1 2984435 2983185 -2 - 1251 Acyltransferase - none -
fig|6666666.230108.peg.1729 CDS JH724260.1 2985003 2984440 -3 - 564 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230108.peg.1730 CDS JH724260.1 2985177 2985473 3 + 297 hypothetical protein - none -
fig|6666666.230108.peg.1731 CDS JH724260.1 2986339 2985845 -1 - 495 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.230108.peg.1732 CDS JH724260.1 2987166 2986483 -3 - 684 FIG170660: TPR domain protein CBSS-226186.1.peg.4253
fig|6666666.230108.peg.1733 CDS JH724260.1 2987404 2988516 1 + 1113 DNA recombination and repair protein RecF CBSS-226186.1.peg.4253;
Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.230108.peg.1734 CDS JH724260.1 2988513 2988803 3 + 291 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.230108.peg.1735 CDS JH724260.1 2989581 2988796 -3 - 786 Histidinol-phosphatase (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.230108.peg.1736 CDS JH724260.1 2990072 2989578 -2 - 495 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.230108.peg.1737 CDS JH724260.1 2991765 2990026 -3 - 1740 Carboxy-terminal processing protease - none -
fig|6666666.230108.peg.1738 CDS JH724260.1 2992284 2991823 -3 - 462 dCMP deaminase (EC 3.5.4.12) - none -
fig|6666666.230108.peg.1739 CDS JH724260.1 2992788 2992294 -3 - 495 FIG00405147: hypothetical protein - none -
fig|6666666.230108.peg.1740 CDS JH724260.1 2994911 2992815 -2 - 2097 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.230108.peg.1741 CDS JH724260.1 2996179 2995013 -1 - 1167 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.230108.peg.1742 CDS JH724260.1 2996164 2996598 1 + 435 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.230108.peg.1743 CDS JH724260.1 2997061 2998614 1 + 1554 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.230108.peg.1744 CDS JH724260.1 2998654 2999961 1 + 1308 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.230108.peg.1745 CDS JH724260.1 3000058 3000729 1 + 672 Lipolytic enzyme, G-D-S-L precursor - none -
fig|6666666.230108.peg.1746 CDS JH724260.1 3001412 3000750 -2 - 663 Hcp transcriptional regulator HcpR (Crp/Fnr family) Nitrosative stress
fig|6666666.230108.peg.1747 CDS JH724260.1 3002203 3001514 -1 - 690 PROBABLE INTEGRAL MEMBRANE PROTEIN - none -
fig|6666666.230108.peg.1748 CDS JH724260.1 3002553 3002383 -3 - 171 FIG00417011: hypothetical protein - none -
fig|6666666.230108.peg.1749 CDS JH724260.1 3002515 3004314 1 + 1800 Putative glycogen debranching enzyme, archaeal type, TIGR01561 Glycogen metabolism
fig|6666666.230108.peg.1750 CDS JH724260.1 3004329 3005597 3 + 1269 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230108.peg.1751 CDS JH724260.1 3005615 3007030 2 + 1416 Alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.230108.peg.1752 CDS JH724260.1 3008694 3007111 -3 - 1584 FIG00898509: hypothetical protein - none -
fig|6666666.230108.peg.1753 CDS JH724260.1 3009542 3008718 -2 - 825 Similar to glycogen synthase (EC 2.4.1.21) - none -
fig|6666666.230108.peg.1754 CDS JH724260.1 3009789 3010646 3 + 858 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.230108.peg.1755 CDS JH724260.1 3010679 3011032 2 + 354 Aspartate 1-decarboxylase (EC 4.1.1.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.230108.peg.1756 CDS JH724260.1 3012742 3011096 -1 - 1647 FIG00407931: hypothetical protein - none -
fig|6666666.230108.peg.1757 CDS JH724260.1 3015150 3012850 -3 - 2301 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230108.peg.1758 CDS JH724260.1 3015386 3017482 2 + 2097 TonB-dependent receptor, putative - none -
fig|6666666.230108.peg.1759 CDS JH724260.1 3017488 3018501 1 + 1014 putative two-component system sensor protein, no kinase domain - none -
fig|6666666.230108.peg.1760 CDS JH724260.1 3018503 3019204 2 + 702 two-component system response regulator protein - none -
fig|6666666.230108.peg.1761 CDS JH724260.1 3020626 3019352 -1 - 1275 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.230108.peg.1762 CDS JH724260.1 3020881 3020768 -1 - 114 LSU ribosomal protein L27p CBSS-176279.3.peg.868
fig|6666666.230108.peg.1763 CDS JH724260.1 3021377 3021060 -2 - 318 LSU ribosomal protein L21p CBSS-176279.3.peg.868
fig|6666666.230108.peg.1764 CDS JH724260.1 3023616 3021604 -3 - 2013 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.230108.peg.1765 CDS JH724260.1 3023790 3026021 3 + 2232 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230108.peg.1766 CDS JH724260.1 3026033 3026626 2 + 594 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.1767 CDS JH724260.1 3026638 3027627 1 + 990 Putative anti-sigma factor - none -
fig|6666666.230108.peg.1768 CDS JH724260.1 3027693 3029969 3 + 2277 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230108.peg.1769 CDS JH724260.1 3030273 3033659 3 + 3387 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.1770 CDS JH724260.1 3033671 3035260 2 + 1590 FIG00937161: hypothetical protein - none -
fig|6666666.230108.peg.1771 CDS JH724260.1 3035283 3036296 3 + 1014 Endo-beta-N-acetylglucosaminidase F2 - none -
fig|6666666.230108.peg.1772 CDS JH724260.1 3036306 3037460 3 + 1155 Patatin-like protein - none -
fig|6666666.230108.peg.1773 CDS JH724260.1 3037499 3039481 2 + 1983 endo-beta-N-acetylglucosaminidase - none -
fig|6666666.230108.peg.1774 CDS JH724260.1 3039648 3041918 3 + 2271 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230108.peg.1775 CDS JH724260.1 3041994 3043250 3 + 1257 AmpG protein, beta-lactamase induction signal transducer - none -
fig|6666666.230108.peg.1776 CDS JH724260.1 3043274 3044245 2 + 972 COG2152 predicted glycoside hydrolase - none -
fig|6666666.230108.peg.1777 CDS JH724260.1 3044612 3044418 -2 - 195 hypothetical protein - none -
fig|6666666.230108.peg.1778 CDS JH724260.1 3044580 3046784 3 + 2205 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230108.peg.1779 CDS JH724260.1 3048389 3046863 -2 - 1527 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.1780 CDS JH724260.1 3049716 3048832 -3 - 885 FIG00404457: hypothetical protein - none -
fig|6666666.230108.peg.1781 CDS JH724260.1 3050306 3049794 -2 - 513 Lipoprotein spr precursor - none -
fig|6666666.230108.peg.1782 CDS JH724260.1 3051106 3050303 -1 - 804 ATP-binding protein - none -
fig|6666666.230108.peg.1783 CDS JH724260.1 3052619 3051132 -2 - 1488 FIG00406426: hypothetical protein - none -
fig|6666666.230108.peg.1784 CDS JH724260.1 3055453 3052703 -1 - 2751 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.230108.peg.1785 CDS JH724260.1 3056435 3055635 -2 - 801 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation
fig|6666666.230108.peg.1786 CDS JH724260.1 3057385 3056459 -1 - 927 Transcription regulator [contains diacylglycerol kinase catalytic domain] - none -
fig|6666666.230108.peg.1787 CDS JH724260.1 3058369 3057452 -1 - 918 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.230108.peg.1788 CDS JH724260.1 3059010 3058870 -3 - 141 hypothetical protein - none -
fig|6666666.230108.peg.1789 CDS JH724260.1 3058998 3060290 3 + 1293 BexA - none -
fig|6666666.230108.peg.1790 CDS JH724260.1 3060305 3060925 2 + 621 Chloramphenicol acetyltransferase (EC 2.3.1.28) - none -
fig|6666666.230108.peg.1791 CDS JH724260.1 3062996 3060936 -2 - 2061 FIG00403395: hypothetical protein - none -
fig|6666666.230108.peg.1792 CDS JH724260.1 3063124 3063708 1 + 585 FIG00407655: hypothetical protein - none -
fig|6666666.230108.peg.1793 CDS JH724260.1 3064475 3063711 -2 - 765 transcriptional regulator - none -
fig|6666666.230108.peg.1794 CDS JH724260.1 3067917 3065515 -3 - 2403 putative subtilisin proteinase-like protein - none -
fig|6666666.230108.peg.1795 CDS JH724260.1 3068890 3067931 -1 - 960 AAA-family ATPase - none -
fig|6666666.230108.peg.1796 CDS JH724260.1 3069214 3069786 1 + 573 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230108.peg.1797 CDS JH724260.1 3069851 3070069 2 + 219 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230108.peg.1798 CDS JH724260.1 3070948 3070169 -1 - 780 hypothetical protein - none -
fig|6666666.230108.peg.1799 CDS JH724260.1 3071621 3071334 -2 - 288 hypothetical protein - none -
fig|6666666.230108.peg.1800 CDS JH724260.1 3071928 3071644 -3 - 285 hypothetical protein - none -
fig|6666666.230108.peg.1801 CDS JH724260.1 3072403 3072696 1 + 294 hypothetical protein - none -
fig|6666666.230108.peg.1802 CDS JH724260.1 3072753 3073457 3 + 705 Maebl - none -
fig|6666666.230108.peg.1803 CDS JH724260.1 3074332 3073541 -1 - 792 ThiF family protein, ubiquitin-activating enzyme - none -
fig|6666666.230108.peg.1804 CDS JH724260.1 3075039 3074329 -3 - 711 hypothetical protein - none -
fig|6666666.230108.peg.1805 CDS JH724260.1 3076150 3075041 -1 - 1110 hypothetical protein - none -
fig|6666666.230108.peg.1806 CDS JH724260.1 3076408 3076187 -1 - 222 FIG00408893: hypothetical protein - none -
fig|6666666.230108.peg.1807 CDS JH724260.1 3077435 3076431 -2 - 1005 hypothetical protein - none -
fig|6666666.230108.peg.1808 CDS JH724260.1 3077748 3077539 -3 - 210 hypothetical protein - none -
fig|6666666.230108.peg.1809 CDS JH724260.1 3077979 3077767 -3 - 213 hypothetical protein - none -
fig|6666666.230108.peg.1810 CDS JH724260.1 3078062 3078187 2 + 126 hypothetical protein - none -
fig|6666666.230108.peg.1811 CDS JH724260.1 3080054 3078282 -2 - 1773 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.230108.peg.1812 CDS JH724260.1 3080403 3080128 -3 - 276 hypothetical protein - none -
fig|6666666.230108.peg.1813 CDS JH724260.1 3082296 3080458 -3 - 1839 FIG00936597: hypothetical protein - none -
fig|6666666.230108.peg.1814 CDS JH724260.1 3082954 3082664 -1 - 291 hypothetical protein - none -
fig|6666666.230108.peg.1815 CDS JH724260.1 3083150 3084373 2 + 1224 Mobile element protein - none -
fig|6666666.230108.peg.1816 CDS JH724260.1 3084998 3085417 2 + 420 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230108.peg.1817 CDS JH724260.1 3085442 3086566 2 + 1125 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.230108.peg.1818 CDS JH724260.1 3086570 3087364 2 + 795 Polysaccharide export outer membrane protein - none -
fig|6666666.230108.peg.1819 CDS JH724260.1 3087392 3089830 2 + 2439 Tyrosine-protein kinase Wzc (EC 2.7.10.2) CBSS-258594.1.peg.3339
fig|6666666.230108.peg.1820 CDS JH724260.1 3089869 3090573 1 + 705 Protein-tyrosine-phosphatase (EC 3.1.3.48) - none -
fig|6666666.230108.peg.1821 CDS JH724260.1 3090793 3091023 1 + 231 hypothetical protein - none -
fig|6666666.230108.peg.1822 CDS JH724260.1 3091101 3091742 3 + 642 hypothetical protein - none -
fig|6666666.230108.peg.1823 CDS JH724260.1 3091910 3092668 2 + 759 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230108.peg.1824 CDS JH724260.1 3092670 3093242 3 + 573 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Capsular heptose biosynthesis;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230108.peg.1825 CDS JH724260.1 3093253 3094122 1 + 870 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230108.peg.1826 CDS JH724260.1 3094112 3095254 2 + 1143 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) CBSS-296591.1.peg.2330;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230108.peg.1827 CDS JH724260.1 3095802 3096143 3 + 342 hypothetical protein - none -
fig|6666666.230108.peg.1828 CDS JH724260.1 3096211 3098004 1 + 1794 Mobile element protein - none -
fig|6666666.230108.peg.1829 CDS JH724260.1 3098189 3098410 2 + 222 hypothetical protein - none -
fig|6666666.230108.peg.1830 CDS JH724260.1 3098394 3099068 3 + 675 hypothetical protein - none -
fig|6666666.230108.peg.1831 CDS JH724260.1 3099178 3100764 1 + 1587 putative flippase - none -
fig|6666666.230108.peg.1832 CDS JH724260.1 3100761 3101870 3 + 1110 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230108.peg.1833 CDS JH724260.1 3102682 3102882 1 + 201 hypothetical protein - none -
fig|6666666.230108.peg.1834 CDS JH724260.1 3102884 3103987 2 + 1104 Gll3707 protein - none -
fig|6666666.230108.peg.1835 CDS JH724260.1 3103990 3105126 1 + 1137 Related to F420H2-dehydrogenase, beta subunit - none -
fig|6666666.230108.peg.1836 CDS JH724260.1 3105078 3106037 3 + 960 Glycosyl transferase, family 2 - none -
fig|6666666.230108.peg.1837 CDS JH724260.1 3106045 3107064 1 + 1020 putative membrane protein - none -
fig|6666666.230108.peg.1838 CDS JH724260.1 3107188 3107051 -1 - 138 hypothetical protein - none -
fig|6666666.230108.peg.1839 CDS JH724260.1 3107165 3107704 2 + 540 acyltransferase 3 - none -
fig|6666666.230108.peg.1840 CDS JH724260.1 3108050 3108754 2 + 705 hypothetical protein - none -
fig|6666666.230108.peg.1841 CDS JH724260.1 3108822 3109754 3 + 933 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230108.peg.1842 CDS JH724260.1 3109790 3110953 2 + 1164 hypothetical protein - none -
fig|6666666.230108.peg.1843 CDS JH724260.1 3110950 3112200 1 + 1251 putative glycosyltransferase protein CBSS-258594.1.peg.3339
fig|6666666.230108.peg.1844 CDS JH724260.1 3112260 3113297 3 + 1038 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230108.peg.1845 CDS JH724260.1 3113610 3114488 3 + 879 hypothetical protein - none -
fig|6666666.230108.peg.1846 CDS JH724260.1 3114485 3115282 2 + 798 hypothetical protein - none -
fig|6666666.230108.peg.1847 CDS JH724260.1 3115302 3116378 3 + 1077 Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase (EC 2.4.1.-) Rhamnose containing glycans
fig|6666666.230108.peg.1848 CDS JH724260.1 3116423 3117289 2 + 867 FIG00413876: hypothetical protein - none -
fig|6666666.230108.peg.1849 CDS JH724260.1 3117286 3118107 1 + 822 hypothetical protein - none -
fig|6666666.230108.peg.1850 CDS JH724260.1 3118128 3118934 3 + 807 hypothetical protein - none -
fig|6666666.230108.peg.1851 CDS JH724260.1 3119053 3124506 1 + 5454 hypothetical protein - none -
fig|6666666.230108.peg.1852 CDS JH724260.1 3124556 3124909 2 + 354 hypothetical protein - none -
fig|6666666.230108.peg.1853 CDS JH724260.1 3124980 3126170 3 + 1191 FIG00417050: hypothetical protein - none -
fig|6666666.230108.peg.1854 CDS JH724260.1 3126394 3128661 1 + 2268 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.1855 CDS JH724260.1 3128621 3129910 2 + 1290 Response regulator of zinc sigma-54-dependent two-component system Zinc resistance
fig|6666666.230108.peg.1856 CDS JH724260.1 3130176 3129916 -3 - 261 hypothetical protein - none -
fig|6666666.230108.peg.1857 CDS JH724260.1 3132669 3130633 -3 - 2037 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1858 CDS JH724260.1 3133926 3132703 -3 - 1224 Mobile element protein - none -
fig|6666666.230108.peg.1859 CDS JH724260.1 3134357 3133935 -2 - 423 Mobile element protein - none -
fig|6666666.230108.peg.1860 CDS JH724260.1 3135014 3135874 2 + 861 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1861 CDS JH724260.1 3135883 3136332 1 + 450 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1862 CDS JH724260.1 3136320 3136988 3 + 669 Conjugative transposon protein TraD Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1863 CDS JH724260.1 3137250 3137552 3 + 303 Conjugative transposon protein TraE Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1864 CDS JH724260.1 3137558 3137884 2 + 327 Conjugative transposon protein TraF Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1865 CDS JH724260.1 3137881 3140415 1 + 2535 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1866 CDS JH724260.1 3140430 3140768 3 + 339 Conjugative transposon protein TraH Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1867 CDS JH724260.1 3140765 3141394 2 + 630 Conjugative transposon protein TraI Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1868 CDS JH724260.1 3141397 3142410 1 + 1014 Conjugative transposon protein TraJ Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1869 CDS JH724260.1 3142536 3143159 3 + 624 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1870 CDS JH724260.1 3143347 3143177 -1 - 171 hypothetical protein - none -
fig|6666666.230108.peg.1871 CDS JH724260.1 3143412 3144713 3 + 1302 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1872 CDS JH724260.1 3144763 3145677 1 + 915 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1873 CDS JH724260.1 3145674 3146261 3 + 588 Conjugative transposon protein TraO Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1874 CDS JH724260.1 3146304 3146744 3 + 441 Conjugative transposon protein TraQ Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.1875 CDS JH724260.1 3146741 3147220 2 + 480 Lysozyme-related protein - none -
fig|6666666.230108.peg.1876 CDS JH724260.1 3148443 3147289 -3 - 1155 FIG00896816: hypothetical protein - none -
fig|6666666.230108.peg.1877 CDS JH724260.1 3149338 3148469 -1 - 870 Phage protein - none -
fig|6666666.230108.peg.1878 CDS JH724260.1 3150598 3149363 -1 - 1236 FIG00899322: hypothetical protein - none -
fig|6666666.230108.peg.1879 CDS JH724260.1 3151371 3150604 -3 - 768 Type I restriction enzyme, M subunit - none -
fig|6666666.230108.peg.1880 CDS JH724260.1 3152179 3151373 -1 - 807 FIG00896576: hypothetical protein - none -
fig|6666666.230108.peg.1881 CDS JH724260.1 3152444 3152166 -2 - 279 FIG00411855: hypothetical protein - none -
fig|6666666.230108.peg.1882 CDS JH724260.1 3153016 3152726 -1 - 291 FIG00898875: hypothetical protein - none -
fig|6666666.230108.peg.1883 CDS JH724260.1 3153350 3153694 2 + 345 FIG00897117: hypothetical protein - none -
fig|6666666.230108.peg.1884 CDS JH724260.1 3154499 3153753 -2 - 747 FIG00899242: hypothetical protein - none -
fig|6666666.230108.peg.1885 CDS JH724260.1 3155166 3154465 -3 - 702 hypothetical protein - none -
fig|6666666.230108.peg.1886 CDS JH724260.1 3156196 3155177 -1 - 1020 FIG00896987: hypothetical protein - none -
fig|6666666.230108.peg.1887 CDS JH724260.1 3156419 3156210 -2 - 210 hypothetical protein - none -
fig|6666666.230108.peg.1888 CDS JH724260.1 3156694 3156395 -1 - 300 hypothetical protein - none -
fig|6666666.230108.peg.1889 CDS JH724260.1 3157290 3156691 -3 - 600 FIG00897967: hypothetical protein - none -
fig|6666666.230108.peg.1890 CDS JH724260.1 3157835 3157338 -2 - 498 FIG00898764: hypothetical protein - none -
fig|6666666.230108.peg.1891 CDS JH724260.1 3158137 3157886 -1 - 252 hypothetical protein - none -
fig|6666666.230108.peg.1892 CDS JH724260.1 3159094 3158207 -1 - 888 hypothetical protein - none -
fig|6666666.230108.peg.1893 CDS JH724260.1 3160240 3159098 -1 - 1143 FIG00898363: hypothetical protein - none -
fig|6666666.230108.peg.1894 CDS JH724260.1 3160521 3160225 -3 - 297 hypothetical protein - none -
fig|6666666.230108.peg.1895 CDS JH724260.1 3160548 3160742 3 + 195 hypothetical protein - none -
fig|6666666.230108.peg.1896 CDS JH724260.1 3160943 3160827 -2 - 117 hypothetical protein - none -
fig|6666666.230108.peg.1897 CDS JH724260.1 3161072 3161341 2 + 270 hypothetical protein - none -
fig|6666666.230108.peg.1898 CDS JH724260.1 3162680 3161445 -2 - 1236 Mobile element protein - none -
fig|6666666.230108.peg.1899 CDS JH724260.1 3163055 3162933 -2 - 123 hypothetical protein - none -
fig|6666666.230108.peg.1900 CDS JH724260.1 3164412 3163363 -3 - 1050 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.230108.peg.1901 CDS JH724260.1 3165183 3164419 -3 - 765 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions
fig|6666666.230108.peg.1902 CDS JH724260.1 3166159 3165167 -1 - 993 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) - none -
fig|6666666.230108.peg.1903 CDS JH724260.1 3168067 3166298 -1 - 1770 Protease IV - none -
fig|6666666.230108.peg.1904 CDS JH724260.1 3168797 3168657 -2 - 141 hypothetical protein - none -
fig|6666666.230108.peg.1905 CDS JH724260.1 3168921 3169094 3 + 174 hypothetical protein - none -
fig|6666666.230108.peg.1906 CDS JH724260.1 3174551 3174787 2 + 237 hypothetical protein - none -
fig|6666666.230108.peg.1907 CDS JH724260.1 3175154 3176650 2 + 1497 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.230108.peg.1908 CDS JH724260.1 3176780 3178174 2 + 1395 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.230108.peg.1909 CDS JH724260.1 3178314 3178877 3 + 564 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.230108.peg.1910 CDS JH724260.1 3178867 3180408 1 + 1542 (R)-citramalate synthase (EC 2.3.1.182) Branched-Chain Amino Acid Biosynthesis
fig|6666666.230108.peg.1911 CDS JH724260.1 3180421 3180678 1 + 258 FIG00415981: hypothetical protein - none -
fig|6666666.230108.peg.1912 CDS JH724260.1 3180668 3181729 2 + 1062 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.230108.peg.1913 CDS JH724260.1 3181985 3181872 -2 - 114 hypothetical protein - none -
fig|6666666.230108.peg.1914 CDS JH724260.1 3182073 3183023 3 + 951 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.230108.peg.1915 CDS JH724260.1 3183039 3183890 3 + 852 TPR-repeat-containing protein - none -
fig|6666666.230108.peg.1916 CDS JH724260.1 3185705 3183894 -2 - 1812 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.230108.peg.1917 CDS JH724260.1 3185987 3186460 2 + 474 Transcriptional regulator, AraC/XylS family - none -
fig|6666666.230108.peg.1918 CDS JH724260.1 3186583 3188610 1 + 2028 Dipeptidyl-peptidase III (EC 3.4.14.4) - none -
fig|6666666.230108.peg.1919 CDS JH724260.1 3188617 3189291 1 + 675 Peptidase, M49 family - none -
fig|6666666.230108.peg.1920 CDS JH724260.1 3189392 3189907 2 + 516 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.230108.peg.1921 CDS JH724260.1 3189904 3191175 1 + 1272 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.230108.peg.1922 CDS JH724260.1 3191293 3192582 1 + 1290 Alpha-L-fucosidase (EC 3.2.1.51) - none -
fig|6666666.230108.peg.1923 CDS JH724260.1 3192724 3193410 1 + 687 FIG00897182: hypothetical protein - none -
fig|6666666.230108.peg.1924 CDS JH724260.1 3194680 3193517 -1 - 1164 hypothetical protein - none -
fig|6666666.230108.peg.1925 CDS JH724260.1 3194948 3196174 2 + 1227 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.230108.peg.1926 CDS JH724260.1 3196210 3196479 1 + 270 FIG00411025: hypothetical protein - none -
fig|6666666.230108.peg.1927 CDS JH724260.1 3196528 3197289 1 + 762 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.230108.peg.1928 CDS JH724260.1 3198113 3197259 -2 - 855 FIG00406457: hypothetical protein - none -
fig|6666666.230108.peg.1929 CDS JH724260.1 3198297 3198569 3 + 273 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.230108.peg.1930 CDS JH724260.1 3198607 3200244 1 + 1638 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.230108.peg.1931 CDS JH724260.1 3200499 3200717 3 + 219 hypothetical protein - none -
fig|6666666.230108.peg.1932 CDS JH724260.1 3200701 3200856 1 + 156 hypothetical protein - none -
fig|6666666.230108.peg.1933 CDS JH724260.1 3200874 3201893 3 + 1020 Low-specificity L-threonine aldolase (EC 4.1.2.48) - none -
fig|6666666.230108.peg.1934 CDS JH724260.1 3204575 3202065 -2 - 2511 Endoglucanase D precursor (EC 3.2.1.4) - none -
fig|6666666.230108.peg.1935 CDS JH724260.1 3204884 3205852 2 + 969 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.230108.peg.1936 CDS JH724260.1 3205852 3206163 1 + 312 FIG00403615: hypothetical protein - none -
fig|6666666.230108.peg.1937 CDS JH724260.1 3208007 3206301 -2 - 1707 Acyl-CoA dehydrogenase (EC 1.3.8.7) - none -
fig|6666666.230108.peg.1938 CDS JH724260.1 3208839 3208018 -3 - 822 Regulatory sensor-transducer, BlaR1/MecR1 family / TonB family protein - none -
fig|6666666.230108.peg.1939 CDS JH724260.1 3209873 3208854 -2 - 1020 Electron transfer flavoprotein, alpha subunit - none -
fig|6666666.230108.peg.1940 CDS JH724260.1 3210765 3209878 -3 - 888 Electron transfer flavoprotein, beta subunit - none -
fig|6666666.230108.peg.1941 CDS JH724260.1 3211108 3212868 1 + 1761 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.230108.peg.1942 CDS JH724260.1 3214115 3212913 -2 - 1203 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.230108.peg.1943 CDS JH724260.1 3214208 3215059 2 + 852 Patatin-like phospholipase - none -
fig|6666666.230108.peg.1944 CDS JH724260.1 3215357 3218389 2 + 3033 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1945 CDS JH724260.1 3218409 3220193 3 + 1785 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.1946 CDS JH724260.1 3220267 3222402 1 + 2136 Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) - none -
fig|6666666.230108.peg.1947 CDS JH724260.1 3222402 3223886 3 + 1485 Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) - none -
fig|6666666.230108.peg.1948 CDS JH724260.1 3223883 3225955 2 + 2073 hypothetical protein - none -
fig|6666666.230108.peg.1949 CDS JH724260.1 3225960 3228140 3 + 2181 Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) - none -
fig|6666666.230108.peg.1950 CDS JH724260.1 3228343 3230088 1 + 1746 Levanase (EC 3.2.1.65) - none -
fig|6666666.230108.peg.1951 CDS JH724260.1 3230107 3231273 1 + 1167 Predicted glucose transporter in maltodextrin utilization gene cluster Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.1952 CDS JH724260.1 3231508 3232395 1 + 888 Fructokinase (EC 2.7.1.4) - none -
fig|6666666.230108.peg.1953 CDS JH724260.1 3232461 3235226 3 + 2766 DNA-binding response regulator, AraC family - none -
fig|6666666.230108.peg.1954 CDS JH724260.1 3239117 3235560 -2 - 3558 Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) Methionine Degradation;
Pyruvate:ferredoxin oxidoreductase
fig|6666666.230108.peg.1955 CDS JH724260.1 3240337 3239159 -1 - 1179 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.230108.peg.1956 CDS JH724260.1 3240466 3241674 1 + 1209 FIG00403009: hypothetical protein - none -
fig|6666666.230108.peg.1957 CDS JH724260.1 3243166 3241658 -1 - 1509 COG1649 predicted glycoside hydrolase - none -
fig|6666666.230108.peg.1958 CDS JH724260.1 3243238 3244638 1 + 1401 Carbon starvation protein A Carbon Starvation
fig|6666666.230108.peg.1959 CDS JH724260.1 3244668 3244889 3 + 222 FIG00404951: hypothetical protein - none -
fig|6666666.230108.peg.1960 CDS JH724260.1 3244915 3245403 1 + 489 FIG00403605: hypothetical protein - none -
fig|6666666.230108.peg.1961 CDS JH724260.1 3245847 3245527 -3 - 321 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.230108.peg.1962 CDS JH724260.1 3246215 3245844 -2 - 372 FIG00417077: hypothetical protein - none -
fig|6666666.230108.peg.1963 CDS JH724260.1 3246423 3247532 3 + 1110 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.230108.peg.1964 CDS JH724260.1 3250416 3247633 -3 - 2784 Excinuclease ABC subunit A paralog in greater Bacteroides group DNA repair, UvrABC system
fig|6666666.230108.peg.1965 CDS JH724260.1 3250601 3252550 2 + 1950 two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.1966 CDS JH724260.1 3252591 3254102 3 + 1512 COG1649 predicted glycoside hydrolase - none -
fig|6666666.230108.peg.1967 CDS JH724260.1 3254724 3254155 -3 - 570 Chromate transport protein - none -
fig|6666666.230108.peg.1968 CDS JH724260.1 3255351 3254809 -3 - 543 Chromate transport protein - none -
fig|6666666.230108.peg.1969 CDS JH724260.1 3256088 3255948 -2 - 141 hypothetical protein - none -
fig|6666666.230108.peg.1970 CDS JH724260.1 3256509 3256198 -3 - 312 hypothetical protein - none -
fig|6666666.230108.peg.1971 CDS JH724260.1 3256754 3256518 -2 - 237 Mobile element protein - none -
fig|6666666.230108.peg.1972 CDS JH724260.1 3257223 3256936 -3 - 288 Mobile element protein - none -
fig|6666666.230108.peg.1973 CDS JH724260.1 3257753 3257532 -2 - 222 hypothetical protein - none -
fig|6666666.230108.peg.1974 CDS JH724260.1 3257928 3258098 3 + 171 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.230108.peg.1975 CDS JH724260.1 3259102 3258566 -1 - 537 Methylglyoxal synthase (EC 4.2.3.3) Methylglyoxal Metabolism
fig|6666666.230108.peg.1976 CDS JH724260.1 3259951 3259157 -1 - 795 Arginase (EC 3.5.3.1) Arginine and Ornithine Degradation
fig|6666666.230108.peg.1977 CDS JH724260.1 3262541 3259983 -2 - 2559 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.1978 CDS JH724260.1 3264809 3262563 -2 - 2247 POTASSIUM/PROTON ANTIPORTER ROSB Potassium homeostasis
fig|6666666.230108.peg.1979 CDS JH724260.1 3265806 3264823 -3 - 984 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.230108.peg.1980 CDS JH724260.1 3266327 3265872 -2 - 456 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.1981 CDS JH724260.1 3266772 3266413 -3 - 360 Small heat shock protein - none -
fig|6666666.230108.peg.1982 CDS JH724260.1 3267659 3266910 -2 - 750 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.230108.peg.1983 CDS JH724260.1 3268722 3267673 -3 - 1050 Fructose-bisphosphate aldolase class I (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.230108.peg.1984 CDS JH724260.1 3269233 3268751 -1 - 483 Ferritin-like protein 2 Iron-sulfur cluster assembly
fig|6666666.230108.peg.1985 CDS JH724260.1 3269880 3269284 -3 - 597 Multiple antibiotic resistance protein marC - none -
fig|6666666.230108.peg.1986 CDS JH724260.1 3270339 3270034 -3 - 306 ferritin A - none -
fig|6666666.230108.peg.1987 CDS JH724260.1 3270857 3270648 -2 - 210 FIG00409095: hypothetical protein - none -
fig|6666666.230108.peg.1988 CDS JH724260.1 3271518 3271393 -3 - 126 hypothetical protein - none -
fig|6666666.230108.peg.1989 CDS JH724260.1 3271672 3271538 -1 - 135 hypothetical protein - none -
fig|6666666.230108.peg.1990 CDS JH724260.1 3272236 3272358 1 + 123 hypothetical protein - none -
fig|6666666.230108.peg.1991 CDS JH724260.1 3272383 3272808 1 + 426 transposase - none -
fig|6666666.230108.peg.1992 CDS JH724260.1 3272799 3273029 3 + 231 Integrase - none -
fig|6666666.230108.peg.1993 CDS JH724260.1 3273050 3273241 2 + 192 Integrase - none -
fig|6666666.230108.peg.1994 CDS JH724260.1 3273866 3273327 -2 - 540 Flavodoxin Flavodoxin
fig|6666666.230108.peg.1995 CDS JH724260.1 3274940 3273909 -2 - 1032 Putative exported protein precursor - none -
fig|6666666.230108.peg.1996 CDS JH724260.1 3276120 3274948 -3 - 1173 Aldo-keto reductase - none -
fig|6666666.230108.peg.1997 CDS JH724260.1 3276762 3276247 -3 - 516 hypothetical protein - none -
fig|6666666.230108.peg.1998 CDS JH724260.1 3276773 3277747 2 + 975 FIG00937482: hypothetical protein - none -
fig|6666666.230108.peg.1999 CDS JH724260.1 3277744 3278865 1 + 1122 FIG00939054: hypothetical protein - none -
fig|6666666.230108.peg.2000 CDS JH724260.1 3279234 3280619 3 + 1386 mobilization protein - none -
fig|6666666.230108.peg.2001 CDS JH724260.1 3280854 3281720 3 + 867 Abortive infection bacteriophage resistance protein - none -
fig|6666666.230108.peg.2002 CDS JH724260.1 3282941 3281964 -2 - 978 unnamed protein product - none -
fig|6666666.230108.peg.2003 CDS JH724260.1 3284261 3284422 2 + 162 FIG00409403: hypothetical protein - none -
fig|6666666.230108.peg.2004 CDS JH724260.1 3285128 3284526 -2 - 603 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230108.peg.2005 CDS JH724260.1 3286730 3285138 -2 - 1593 SusD, outer membrane protein Cellulosome
fig|6666666.230108.peg.2006 CDS JH724260.1 3290855 3288189 -2 - 2667 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.2007 CDS JH724260.1 3290946 3291095 3 + 150 hypothetical protein - none -
fig|6666666.230108.peg.2008 CDS JH724260.1 3293663 3292056 -2 - 1608 Dienelactone hydrolase and related enzymes - none -
fig|6666666.230108.peg.2009 CDS JH724260.1 3294842 3293688 -2 - 1155 3-carboxymuconate cyclase - none -
fig|6666666.230108.peg.2010 CDS JH724260.1 3295128 3296042 3 + 915 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.2011 CDS JH724260.1 3297037 3296111 -1 - 927 FIG00408380: hypothetical protein - none -
fig|6666666.230108.peg.2012 CDS JH724260.1 3297806 3297045 -2 - 762 FIG00413543: hypothetical protein - none -
fig|6666666.230108.peg.2013 CDS JH724260.1 3298756 3297836 -1 - 921 mobilization protein BmgA - none -
fig|6666666.230108.peg.2014 CDS JH724260.1 3299132 3298761 -2 - 372 Mobile element protein - none -
fig|6666666.230108.peg.2015 CDS JH724260.1 3299854 3299360 -1 - 495 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.2016 CDS JH724260.1 3300332 3300643 2 + 312 FIG00897868: hypothetical protein - none -
fig|6666666.230108.peg.2017 CDS JH724260.1 3300687 3301010 3 + 324 FIG00404202: hypothetical protein - none -
fig|6666666.230108.peg.2018 CDS JH724260.1 3301530 3301351 -3 - 180 hypothetical protein - none -
fig|6666666.230108.peg.2019 CDS JH724260.1 3301927 3301535 -1 - 393 hypothetical protein - none -
fig|6666666.230108.peg.2020 CDS JH724260.1 3302519 3301959 -2 - 561 FIG00415993: hypothetical protein - none -
fig|6666666.230108.peg.2021 CDS JH724260.1 3304064 3303465 -2 - 600 FIG00413964: hypothetical protein - none -
fig|6666666.230108.peg.2022 CDS JH724260.1 3304237 3304070 -1 - 168 FIG00415457: hypothetical protein - none -
fig|6666666.230108.peg.2023 CDS JH724260.1 3304393 3304271 -1 - 123 hypothetical protein - none -
fig|6666666.230108.peg.2024 CDS JH724260.1 3304436 3304702 2 + 267 hypothetical protein - none -
fig|6666666.230108.peg.2025 CDS JH724260.1 3305979 3304744 -3 - 1236 transposase - none -
fig|6666666.230108.peg.2026 CDS JH724260.1 3306050 3306175 2 + 126 hypothetical protein - none -
fig|6666666.230108.peg.2027 CDS JH724260.1 3310291 3306248 -1 - 4044 DNA-binding response regulator, AraC family - none -
fig|6666666.230108.peg.2028 CDS JH724260.1 3314134 3310463 -1 - 3672 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.230108.peg.2029 CDS JH724260.1 3314111 3314341 2 + 231 hypothetical protein - none -
fig|6666666.230108.peg.2030 CDS JH724260.1 3316572 3314356 -3 - 2217 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230108.peg.2031 CDS JH724260.1 3316857 3317402 3 + 546 Transporter, LysE family - none -
fig|6666666.230108.peg.2032 CDS JH724260.1 3317440 3317985 1 + 546 FIG00937849: hypothetical protein - none -
fig|6666666.230108.peg.2033 CDS JH724260.1 3318046 3318900 1 + 855 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230108.peg.2034 CDS JH724260.1 3318922 3320496 1 + 1575 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.230108.peg.2035 CDS JH724260.1 3320718 3320852 3 + 135 Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal - none -
fig|6666666.230108.peg.2036 CDS JH724260.1 3321304 3321795 1 + 492 FIG00407890: hypothetical protein - none -
fig|6666666.230108.peg.2037 CDS JH724260.1 3321988 3322245 1 + 258 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230108.peg.2038 CDS JH724260.1 3322285 3324123 1 + 1839 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230108.peg.2039 CDS JH724260.1 3324123 3325358 3 + 1236 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230108.peg.2040 CDS JH724260.1 3326722 3325448 -1 - 1275 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.230108.peg.2041 CDS JH724260.1 3329786 3326757 -2 - 3030 AcrB/D/F family transporter - none -
fig|6666666.230108.peg.2042 CDS JH724260.1 3330889 3329837 -1 - 1053 RND efflux system membrane fusion protein - none -
fig|6666666.230108.peg.2043 CDS JH724260.1 3333365 3331047 -2 - 2319 Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis;
Trehalose Uptake and Utilization
fig|6666666.230108.peg.2044 CDS JH724260.1 3334957 3333590 -1 - 1368 Sugar transporter - none -
fig|6666666.230108.peg.2045 CDS JH724260.1 3335981 3334977 -2 - 1005 Maltose operon transcriptional repressor MalR, LacI family Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.2046 CDS JH724260.1 3336215 3337372 2 + 1158 arabinogalactan endo-1,4-beta-galactosidase - none -
fig|6666666.230108.peg.2047 CDS JH724260.1 3337401 3339878 3 + 2478 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.2048 CDS JH724260.1 3340610 3343576 2 + 2967 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.2049 CDS JH724260.1 3343581 3345227 3 + 1647 SusD, outer membrane protein Cellulosome
fig|6666666.230108.peg.2050 CDS JH724260.1 3345227 3346687 2 + 1461 outer membrane protein SusF - none -
fig|6666666.230108.peg.2051 CDS JH724260.1 3346885 3346772 -1 - 114 hypothetical protein - none -
fig|6666666.230108.peg.2052 CDS JH724260.1 3348572 3347409 -2 - 1164 Mobile element protein - none -
fig|6666666.230108.peg.2053 CDS JH724260.1 3348859 3349935 1 + 1077 Transposase - none -
fig|6666666.230108.peg.2054 CDS JH724260.1 3350876 3350700 -2 - 177 hypothetical protein - none -
fig|6666666.230108.peg.2055 CDS JH724260.1 3350850 3352559 3 + 1710 conserved hypothetical protein - none -
fig|6666666.230108.peg.2056 CDS JH724260.1 3352731 3355310 3 + 2580 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) Cellulosome
fig|6666666.230108.peg.2057 CDS JH724260.1 3356306 3355323 -2 - 984 FIG00405090: hypothetical protein - none -
fig|6666666.230108.peg.2058 CDS JH724260.1 3356400 3356936 3 + 537 Nitroreductase family protein - none -
fig|6666666.230108.peg.2059 CDS JH724260.1 3356939 3357274 2 + 336 FIG00407938: hypothetical protein - none -
fig|6666666.230108.peg.2060 CDS JH724260.1 3357279 3358076 3 + 798 FIG137884: hypothetical protein Coenzyme A Biosynthesis cluster
fig|6666666.230108.peg.2061 CDS JH724260.1 3358156 3358686 1 + 531 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) - none -
fig|6666666.230108.peg.2062 CDS JH724260.1 3358733 3359314 2 + 582 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.230108.peg.2063 CDS JH724260.1 3361503 3359311 -3 - 2193 TPR domain protein - none -
fig|6666666.230108.peg.2064 CDS JH724260.1 3362610 3361585 -3 - 1026 FIG00405727: hypothetical protein - none -
fig|6666666.230108.peg.2065 CDS JH724260.1 3363941 3362685 -2 - 1257 Phosphoglycerate kinase (EC 2.7.2.3) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.230108.peg.2066 CDS JH724260.1 3364707 3364033 -3 - 675 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.230108.peg.2067 CDS JH724260.1 3365900 3364704 -2 - 1197 Major facilitator family transporter - none -
fig|6666666.230108.peg.2068 CDS JH724260.1 3367041 3366007 -3 - 1035 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.230108.peg.2069 CDS JH724260.1 3367101 3367235 3 + 135 hypothetical protein - none -
fig|6666666.230108.peg.2070 CDS JH724260.1 3367398 3370040 3 + 2643 FIG00938541: hypothetical protein - none -
fig|6666666.230108.peg.2071 CDS JH724260.1 3370219 3373377 1 + 3159 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.2072 CDS JH724260.1 3373424 3374734 2 + 1311 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.2073 CDS JH724260.1 3374852 3376048 2 + 1197 Fosmidomycin resistance protein - none -
fig|6666666.230108.peg.2074 CDS JH724260.1 3376430 3376582 2 + 153 hypothetical protein - none -
fig|6666666.230108.peg.2075 CDS JH724260.1 3377171 3377476 2 + 306 FIG00412493: hypothetical protein - none -
fig|6666666.230108.peg.2076 CDS JH724260.1 3377473 3378042 1 + 570 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.230108.peg.2077 CDS JH724260.1 3378077 3380074 2 + 1998 Glycogen debranching enzyme (EC 3.2.1.-) / Pullulanase (EC 3.2.1.41) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.230108.peg.2078 CDS JH724260.1 3380082 3381557 3 + 1476 Putative molybdenum transport ATP-binding protein modF - none -
fig|6666666.230108.peg.2079 CDS JH724260.1 3381660 3382316 3 + 657 Transaldolase (EC 2.2.1.2) Pentose phosphate pathway
fig|6666666.230108.peg.2080 CDS JH724260.1 3382510 3384330 1 + 1821 putative sulfatase - none -
fig|6666666.230108.peg.2081 CDS JH724260.1 3384378 3385064 3 + 687 putative membrane-associated phospholipid phosphatase - none -
fig|6666666.230108.peg.2082 CDS JH724260.1 3387592 3385055 -1 - 2538 FIG00898317: hypothetical protein - none -
fig|6666666.230108.peg.2083 CDS JH724260.1 3388673 3387810 -2 - 864 FIG00898464: hypothetical protein - none -
fig|6666666.230108.peg.2084 CDS JH724260.1 3388889 3390424 2 + 1536 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.230108.peg.2085 CDS JH724260.1 3390470 3391153 2 + 684 Transcriptional regulatory protein rprY - none -
fig|6666666.230108.peg.2086 CDS JH724260.1 3391140 3392381 3 + 1242 Small-conductance mechanosensitive channel - none -
fig|6666666.230108.peg.2087 CDS JH724260.1 3393436 3392378 -1 - 1059 FIG00897204: hypothetical protein - none -
fig|6666666.230108.peg.2088 CDS JH724260.1 3394935 3393478 -3 - 1458 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.230108.peg.2089 CDS JH724260.1 3395168 3395407 2 + 240 FIG00415025: hypothetical protein - none -
fig|6666666.230108.peg.2090 CDS JH724260.1 3395454 3396035 3 + 582 Outer membrane protein H precursor Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.230108.peg.2091 CDS JH724260.1 3396942 3396172 -3 - 771 Cytoplasmic copper homeostasis protein cutC - none -
fig|6666666.230108.peg.2092 CDS JH724260.1 3398566 3397028 -1 - 1539 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) CBSS-226186.1.peg.4416;
Purine conversions
fig|6666666.230108.peg.2093 CDS JH724260.1 3398982 3398692 -3 - 291 Cell division ZapA family protein CBSS-226186.1.peg.4416
fig|6666666.230108.peg.2094 CDS JH724260.1 3399311 3398997 -2 - 315 FIG034863: hypothetical protein CBSS-226186.1.peg.4416
fig|6666666.230108.peg.2095 CDS JH724260.1 3399846 3400373 3 + 528 hypothetical protein - none -
fig|6666666.230108.peg.2096 CDS JH724260.1 3400340 3400474 2 + 135 hypothetical protein - none -
fig|6666666.230108.peg.2097 CDS JH724260.1 3400489 3401070 1 + 582 membrane protein, putative - none -
fig|6666666.230108.peg.2098 CDS JH724260.1 3401084 3401695 2 + 612 membrane protein, putative - none -
fig|6666666.230108.peg.2099 CDS JH724260.1 3401704 3401913 1 + 210 hypothetical protein - none -
fig|6666666.230108.peg.2100 CDS JH724260.1 3401934 3402224 3 + 291 Transcriptional regulators, marR/emrR family - none -
fig|6666666.230108.peg.2101 CDS JH724260.1 3402290 3403069 2 + 780 hypothetical protein - none -
fig|6666666.230108.peg.2102 CDS JH724260.1 3403204 3403782 1 + 579 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.230108.peg.2103 CDS JH724260.1 3404251 3403892 -1 - 360 Hypothetical protein DUF454 - none -
fig|6666666.230108.peg.2104 CDS JH724260.1 3404287 3405159 1 + 873 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230108.peg.2105 CDS JH724260.1 3405175 3406008 1 + 834 hypothetical protein - none -
fig|6666666.230108.peg.2106 CDS JH724260.1 3406135 3406446 1 + 312 Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230108.peg.2107 CDS JH724260.1 3406433 3406978 2 + 546 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230108.peg.2108 CDS JH724260.1 3407759 3407184 -2 - 576 G:T/U mismatch-specific uracil/thymine DNA-glycosylase DNA repair, bacterial;
Uracil-DNA glycosylase
fig|6666666.230108.peg.2109 CDS JH724260.1 3409910 3407814 -2 - 2097 Lysine 2,3-aminomutase (EC 5.4.3.2) - none -
fig|6666666.230108.peg.2110 CDS JH724260.1 3410700 3410074 -3 - 627 FIG00404554: hypothetical protein - none -
fig|6666666.230108.peg.2111 CDS JH724260.1 3412175 3410787 -2 - 1389 Amino acid carrier protein - none -
fig|6666666.230108.peg.2112 CDS JH724260.1 3413124 3412417 -3 - 708 putative ATP-dependent DNA helicase - none -
fig|6666666.230108.peg.2113 CDS JH724260.1 3413208 3413384 3 + 177 FIG00404335: hypothetical protein - none -
fig|6666666.230108.peg.2114 CDS JH724260.1 3413437 3414744 1 + 1308 Biotin synthase related domain containing protein - none -
fig|6666666.230108.peg.2115 CDS JH724260.1 3414741 3415514 3 + 774 Domain often clustered or fused with uracil-DNA glycosylase Uracil-DNA glycosylase
fig|6666666.230108.peg.2116 CDS JH724260.1 3416192 3415521 -2 - 672 Mg(2+) transport ATPase protein C Magnesium transport
fig|6666666.230108.peg.2117 CDS JH724260.1 3417195 3416215 -3 - 981 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Murein Hydrolases
fig|6666666.230108.peg.2118 CDS JH724260.1 3417963 3417238 -3 - 726 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.230108.peg.2119 CDS JH724260.1 3418386 3417976 -3 - 411 FIG004064: hypothetical protein - none -
fig|6666666.230108.peg.2120 CDS JH724260.1 3420281 3418410 -2 - 1872 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.2121 CDS JH724260.1 3420703 3420542 -1 - 162 hypothetical protein - none -
fig|6666666.230108.peg.2122 CDS JH724260.1 3420683 3421240 2 + 558 lipase/acylhydrolase family protein - none -
fig|6666666.230108.peg.2123 CDS JH724260.1 3421263 3421727 3 + 465 MaoC family protein - none -
fig|6666666.230108.peg.2124 CDS JH724260.1 3422238 3421882 -3 - 357 FIG00404860: hypothetical protein - none -
fig|6666666.230108.peg.2125 CDS JH724260.1 3422519 3422241 -2 - 279 Zinc finger domain-containing protein - none -
fig|6666666.230108.peg.2126 CDS JH724260.1 3423014 3422556 -2 - 459 IAA acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.230108.peg.2127 CDS JH724260.1 3423160 3423642 1 + 483 FIG00414117: hypothetical protein - none -
fig|6666666.230108.peg.2128 CDS JH724260.1 3423701 3424018 2 + 318 putative methylated-DNA methyltransferase - none -
fig|6666666.230108.peg.2129 CDS JH724260.1 3424023 3424865 3 + 843 Endonuclease IV (EC 3.1.21.2) DNA repair, bacterial
fig|6666666.230108.peg.2130 CDS JH724260.1 3425259 3424870 -3 - 390 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation;
Ribosome biogenesis bacterial
fig|6666666.230108.peg.2131 CDS JH724260.1 3425742 3425272 -3 - 471 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.230108.peg.2132 CDS JH724260.1 3427412 3425781 -2 - 1632 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.230108.peg.2133 CDS JH724260.1 3427473 3427607 3 + 135 hypothetical protein - none -
fig|6666666.230108.peg.2134 CDS JH724260.1 3427861 3429456 1 + 1596 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.2135 CDS JH724260.1 3429514 3430371 1 + 858 FIG00412737: hypothetical protein - none -
fig|6666666.230108.peg.2136 CDS JH724260.1 3431112 3430462 -3 - 651 Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6) Protein degradation
fig|6666666.230108.peg.2137 CDS JH724260.1 3433357 3431117 -1 - 2241 ATP-dependent Clp protease ATP-binding subunit ClpA ClpAS cluster;
Proteolysis in bacteria, ATP-dependent;
Ribosome recycling related cluster
fig|6666666.230108.peg.2138 CDS JH724260.1 3433681 3433370 -1 - 312 ATP-dependent Clp protease adaptor protein ClpS ClpAS cluster;
Proteolysis in bacteria, ATP-dependent
fig|6666666.230108.peg.2139 CDS JH724260.1 3434403 3433714 -3 - 690 FIG00405132: hypothetical protein - none -
fig|6666666.230108.peg.2140 CDS JH724260.1 3435303 3434446 -3 - 858 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230108.peg.2141 CDS JH724260.1 3435464 3435318 -2 - 147 hypothetical protein - none -
fig|6666666.230108.peg.2142 CDS JH724260.1 3435765 3435535 -3 - 231 hypothetical protein - none -
fig|6666666.230108.peg.2143 CDS JH724260.1 3436862 3435762 -2 - 1101 hypothetical protein - none -
fig|6666666.230108.peg.2144 CDS JH724260.1 3438052 3436979 -1 - 1074 FIG074102: hypothetical protein - none -
fig|6666666.230108.peg.2145 CDS JH724260.1 3439013 3438579 -2 - 435 hypothetical protein - none -
fig|6666666.230108.peg.2146 CDS JH724260.1 3439166 3439050 -2 - 117 hypothetical protein - none -
fig|6666666.230108.peg.2147 CDS JH724260.1 3439638 3439174 -3 - 465 FIG00405194: hypothetical protein - none -
fig|6666666.230108.peg.2148 CDS JH724260.1 3440990 3439698 -2 - 1293 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.230108.peg.2149 CDS JH724260.1 3441085 3441897 1 + 813 Acetyl esterase - none -
fig|6666666.230108.peg.2150 CDS JH724260.1 3442811 3441906 -2 - 906 FIG00405844: hypothetical protein - none -
fig|6666666.230108.peg.2151 CDS JH724260.1 3444207 3442825 -3 - 1383 Carboxyl-terminal protease - none -
fig|6666666.230108.peg.2152 CDS JH724260.1 3444431 3445717 2 + 1287 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.230108.peg.2153 CDS JH724260.1 3445740 3446804 3 + 1065 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.230108.peg.2154 CDS JH724260.1 3447457 3446795 -1 - 663 DNA-binding response regulator, LuxR family - none -
fig|6666666.230108.peg.2155 CDS JH724260.1 3448138 3447548 -1 - 591 FIG00403648: hypothetical protein - none -
fig|6666666.230108.peg.2156 CDS JH724260.1 3449641 3448205 -1 - 1437 Na(+)/H(+) antiporter - none -
fig|6666666.230108.peg.2157 CDS JH724260.1 3450985 3449810 -1 - 1176 Putative transport protein - none -
fig|6666666.230108.peg.2158 CDS JH724260.1 3451109 3451237 2 + 129 hypothetical protein - none -
fig|6666666.230108.peg.2159 CDS JH724260.1 3451423 3453093 1 + 1671 Two-component response regulator - none -
fig|6666666.230108.peg.2160 CDS JH724260.1 3454652 3453258 -2 - 1395 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.230108.peg.2161 CDS JH724260.1 3455812 3454934 -1 - 879 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions
fig|6666666.230108.peg.2162 CDS JH724260.1 3456892 3455906 -1 - 987 DUF1432 domain-containing protein - none -
fig|6666666.230108.peg.2163 CDS JH724260.1 3457426 3456956 -1 - 471 FIG00898184: hypothetical protein - none -
fig|6666666.230108.peg.2164 CDS JH724260.1 3458865 3457435 -3 - 1431 FIG00898772: hypothetical protein - none -
fig|6666666.230108.peg.2165 CDS JH724260.1 3459059 3459781 2 + 723 tRNA(Cytosine32)-2-thiocytidine synthetase tRNA modification Bacteria
fig|6666666.230108.peg.2166 CDS JH724260.1 3459803 3460171 2 + 369 membrane protein, putative - none -
fig|6666666.230108.peg.2167 CDS JH724260.1 3461209 3460193 -1 - 1017 Thiamin biosynthesis lipoprotein ApbE Iron-sulfur cluster assembly
fig|6666666.230108.peg.2168 CDS JH724260.1 3461709 3461236 -3 - 474 Integral membrane protein - none -
fig|6666666.230108.peg.2169 CDS JH724260.1 3462589 3461822 -1 - 768 FIG00937024: hypothetical protein - none -
fig|6666666.230108.peg.2170 CDS JH724260.1 3462950 3462558 -2 - 393 FIG00404794: hypothetical protein - none -
fig|6666666.230108.peg.2171 CDS JH724260.1 3463999 3463046 -1 - 954 Glycosyl transferase - none -
fig|6666666.230108.peg.2172 CDS JH724260.1 3464564 3464055 -2 - 510 FIG00896350: hypothetical protein - none -
fig|6666666.230108.peg.2173 CDS JH724260.1 3465358 3468249 1 + 2892 FIG00417103: hypothetical protein - none -
fig|6666666.230108.peg.2174 CDS JH724260.1 3468541 3469971 1 + 1431 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.2175 CDS JH724260.1 3472443 3474215 3 + 1773 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.2176 CDS JH724260.1 3474234 3475823 3 + 1590 RagB/SusD domain protein - none -
fig|6666666.230108.peg.2177 CDS JH724260.1 3475855 3477228 1 + 1374 FIG00412289: hypothetical protein - none -
fig|6666666.230108.peg.2178 CDS JH724260.1 3477294 3478727 3 + 1434 Beta-glucanase precursor (EC 3.2.1.73) - none -
fig|6666666.230108.peg.2179 CDS JH724260.1 3478816 3480108 1 + 1293 FIG00409141: hypothetical protein - none -
fig|6666666.230108.peg.2180 CDS JH724260.1 3480111 3482363 3 + 2253 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.2181 CDS JH724260.1 3483749 3482460 -2 - 1290 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.230108.peg.2182 CDS JH724260.1 3484483 3483815 -1 - 669 Quinolone resistance protein - none -
fig|6666666.230108.peg.2183 CDS JH724260.1 3484874 3484497 -2 - 378 Protein crcB homolog - none -
fig|6666666.230108.peg.2184 CDS JH724260.1 3485600 3486085 2 + 486 FIG00416107: hypothetical protein - none -
fig|6666666.230108.peg.2185 CDS JH724260.1 3486303 3488465 3 + 2163 Alpha-glucosidase SusB (EC 3.2.1.20) Cellulosome
fig|6666666.230108.peg.2186 CDS JH724260.1 3488671 3489612 1 + 942 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.230108.peg.2187 CDS JH724260.1 3490422 3489616 -3 - 807 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.2188 CDS JH724260.1 3490480 3492006 1 + 1527 Amidophosphoribosyltransferase (EC 2.4.2.14) Colicin V and Bacteriocin Production Cluster;
De Novo Purine Biosynthesis
fig|6666666.230108.peg.2189 CDS JH724260.1 3492203 3493426 2 + 1224 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.230108.peg.2190 CDS JH724260.1 3493458 3494546 3 + 1089 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.230108.peg.2191 CDS JH724260.1 3496164 3494638 -3 - 1527 FIG00409921: hypothetical protein - none -
fig|6666666.230108.peg.2192 CDS JH724260.1 3496679 3496347 -2 - 333 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent - none -
fig|6666666.230108.peg.2193 CDS JH724260.1 3496787 3497794 2 + 1008 FIG00405867: hypothetical protein - none -
fig|6666666.230108.peg.2194 CDS JH724260.1 3498077 3499087 2 + 1011 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.230108.peg.2195 CDS JH724260.1 3499325 3499191 -2 - 135 hypothetical protein - none -
fig|6666666.230108.peg.2196 CDS JH724260.1 3501348 3499558 -3 - 1791 Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135) Cellulosome
fig|6666666.230108.peg.2197 CDS JH724260.1 3502871 3501519 -2 - 1353 TPR-domain containing protein - none -
fig|6666666.230108.peg.2198 CDS JH724260.1 3504201 3503041 -3 - 1161 Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Propionyl-CoA to Succinyl-CoA Module
fig|6666666.230108.peg.2199 CDS JH724260.1 3504637 3504203 -1 - 435 Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.230108.peg.2200 CDS JH724260.1 3505593 3504661 -3 - 933 Membrane protein associated with methylmalonyl-CoA decarboxylase Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.230108.peg.2201 CDS JH724260.1 3507178 3505625 -1 - 1554 Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Propionyl-CoA to Succinyl-CoA Module
fig|6666666.230108.peg.2202 CDS JH724260.1 3507747 3507235 -3 - 513 Methylmalonyl-CoA epimerase (EC 5.1.99.1) Propionyl-CoA to Succinyl-CoA Module
fig|6666666.230108.peg.2203 CDS JH724260.1 3507977 3509428 2 + 1452 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.230108.peg.2204 CDS JH724260.1 3509572 3510933 1 + 1362 Two-component system response regulator - none -
fig|6666666.230108.peg.2205 CDS JH724260.1 3510924 3512237 3 + 1314 Sensor histidine kinase - none -
fig|6666666.230108.peg.2206 CDS JH724260.1 3513883 3512264 -1 - 1620 L-aspartate beta-decarboxylase (EC 4.1.1.12) - none -
fig|6666666.230108.peg.2207 CDS JH724260.1 3515854 3514160 -1 - 1695 putative transport protein - none -
fig|6666666.230108.peg.2208 CDS JH724260.1 3516043 3518580 1 + 2538 FIG00407069: hypothetical protein - none -
fig|6666666.230108.peg.2209 CDS JH724260.1 3518688 3519977 3 + 1290 Inositol-1-phosphate synthase (EC 5.5.1.4) - none -
fig|6666666.230108.peg.2210 CDS JH724260.1 3520113 3520589 3 + 477 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.230108.peg.2211 CDS JH724260.1 3520574 3521101 2 + 528 FIG00403675: hypothetical protein - none -
fig|6666666.230108.peg.2212 CDS JH724260.1 3521091 3521744 3 + 654 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230108.peg.2213 CDS JH724260.1 3521741 3522673 2 + 933 FIG00939867: hypothetical protein - none -
fig|6666666.230108.peg.2214 CDS JH724260.1 3522682 3523854 1 + 1173 NADH-dependent butanol dehydrogenase A (EC 1.1.1.-) - none -
fig|6666666.230108.peg.2215 CDS JH724260.1 3525509 3523935 -2 - 1575 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.230108.peg.2216 CDS JH724260.1 3526019 3525744 -2 - 276 DNA-binding protein HU DNA structural proteins, bacterial
fig|6666666.230108.peg.2217 CDS JH724260.1 3526177 3527217 1 + 1041 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.230108.peg.2218 CDS JH724260.1 3527290 3527745 1 + 456 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.230108.peg.2219 CDS JH724260.1 3527769 3529118 3 + 1350 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.230108.peg.2220 CDS JH724260.1 3529148 3529777 2 + 630 Siderophore (Surfactin) biosynthesis regulatory protein - none -
fig|6666666.230108.peg.2221 CDS JH724260.1 3531156 3529783 -3 - 1374 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.230108.peg.2222 CDS JH724260.1 3533751 3531958 -3 - 1794 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.230108.peg.2223 CDS JH724260.1 3534415 3533726 -1 - 690 Phosphate regulon transcriptional regulatory protein PhoB (SphR) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.230108.peg.2224 CDS JH724260.1 3534716 3535900 2 + 1185 FIG00406664: hypothetical protein - none -
fig|6666666.230108.peg.2225 CDS JH724260.1 3538179 3541367 3 + 3189 outer membrane protein Omp121 - none -
fig|6666666.230108.peg.2226 CDS JH724260.1 3541390 3543249 1 + 1860 FIG00409833: hypothetical protein - none -
fig|6666666.230108.peg.2227 CDS JH724260.1 3543404 3543264 -2 - 141 hypothetical protein - none -
fig|6666666.230108.peg.2228 CDS JH724260.1 3543537 3545315 3 + 1779 hypothetical protein - none -
fig|6666666.230108.peg.2229 CDS JH724260.1 3545715 3546521 3 + 807 FIG00407332: hypothetical protein - none -
fig|6666666.230108.peg.2230 CDS JH724260.1 3546585 3548474 3 + 1890 COG0488: ATPase components of ABC transporters with duplicated ATPase domains - none -
fig|6666666.230108.peg.2231 CDS JH724260.1 3548519 3549361 2 + 843 Histidinol-phosphatase (EC 3.1.3.15) Histidine Biosynthesis
fig|6666666.230108.peg.2232 CDS JH724260.1 3549863 3549435 -2 - 429 Thioredoxin CBSS-315749.4.peg.3658
fig|6666666.230108.peg.2233 CDS JH724260.1 3550211 3549873 -2 - 339 TRX family - none -
fig|6666666.230108.peg.2234 CDS JH724260.1 3552400 3550241 -1 - 2160 FIG00899111: hypothetical protein - none -
fig|6666666.230108.peg.2235 CDS JH724260.1 3554705 3552540 -2 - 2166 FIG00403185: hypothetical protein - none -
fig|6666666.230108.peg.2236 CDS JH724260.1 3555993 3554758 -3 - 1236 Putative arylsulfatase regulatory protein - none -
fig|6666666.230108.peg.2237 CDS JH724260.1 3556127 3556876 2 + 750 FIG00937518: hypothetical protein - none -
fig|6666666.230108.peg.2238 CDS JH724260.1 3557718 3556960 -3 - 759 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230108.peg.2239 CDS JH724260.1 3558943 3557768 -1 - 1176 putative phosphoesterase - none -
fig|6666666.230108.peg.2240 CDS JH724260.1 3559557 3558931 -3 - 627 FIG00402738: hypothetical protein - none -
fig|6666666.230108.peg.2241 CDS JH724260.1 3560047 3559562 -1 - 486 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.2242 CDS JH724260.1 3561155 3560241 -2 - 915 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Methionine Biosynthesis
fig|6666666.230108.peg.2243 CDS JH724260.1 3562542 3561196 -3 - 1347 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.230108.peg.2244 CDS JH724260.1 3563342 3562587 -2 - 756 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.230108.peg.2245 CDS JH724260.1 3563996 3567385 2 + 3390 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.230108.peg.2246 CDS JH724260.1 3568048 3567404 -1 - 645 FIG00407628: hypothetical protein - none -
fig|6666666.230108.peg.2247 CDS JH724260.1 3569922 3568084 -3 - 1839 putative Fe-S oxidoreductase - none -
fig|6666666.230108.peg.2248 CDS JH724260.1 3570137 3569919 -2 - 219 FIG00404338: hypothetical protein - none -
fig|6666666.230108.peg.2249 CDS JH724260.1 3570452 3570138 -2 - 315 FIG00937687: hypothetical protein - none -
fig|6666666.230108.peg.2250 CDS JH724260.1 3573424 3570569 -1 - 2856 Xanthan lyase - none -
fig|6666666.230108.peg.2251 CDS JH724260.1 3574526 3573648 -2 - 879 hypothetical protein-signal peptide and transmembrane prediction - none -
fig|6666666.230108.peg.2252 CDS JH724260.1 3576600 3574696 -3 - 1905 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Sialic Acid Metabolism
fig|6666666.230108.peg.2253 CDS JH724260.1 3577185 3577886 3 + 702 PUTATIVE PERIPLASMIC PROTEIN - none -
fig|6666666.230108.peg.2254 CDS JH724260.1 3578649 3577858 -3 - 792 Possible hydrolase - none -
fig|6666666.230108.peg.2255 CDS JH724260.1 3579241 3578687 -1 - 555 Acyltransferase family protein - none -
fig|6666666.230108.peg.2256 CDS JH724260.1 3579512 3579243 -2 - 270 FIG00405699: hypothetical protein - none -
fig|6666666.230108.peg.2257 CDS JH724260.1 3579870 3581090 3 + 1221 RND efflux system, membrane fusion protein CmeA Multidrug Resistance Efflux Pumps
fig|6666666.230108.peg.2258 CDS JH724260.1 3581098 3584208 1 + 3111 RND efflux system, inner membrane transporter CmeB Multidrug Resistance Efflux Pumps
fig|6666666.230108.peg.2259 CDS JH724260.1 3584226 3585602 3 + 1377 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.230108.peg.2260 CDS JH724260.1 3586190 3585693 -2 - 498 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.230108.peg.2261 CDS JH724260.1 3586431 3586270 -3 - 162 putative RNA-binding protein rbpA - none -
fig|6666666.230108.peg.2262 CDS JH724260.1 3586883 3588529 2 + 1647 Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90) Glycolysis and Gluconeogenesis
fig|6666666.230108.peg.2263 CDS JH724260.1 3588735 3588571 -3 - 165 hypothetical protein - none -
fig|6666666.230108.peg.2264 CDS JH724260.1 3588695 3589471 2 + 777 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) (EC 3.2.1.17) - none -
fig|6666666.230108.peg.2265 CDS JH724260.1 3590368 3589526 -1 - 843 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.230108.peg.2266 CDS JH724260.1 3590485 3590619 1 + 135 hypothetical protein - none -
fig|6666666.230108.peg.2267 CDS JH724260.1 3590650 3592032 1 + 1383 Vitellogenin II precursor - none -
fig|6666666.230108.peg.2268 CDS JH724260.1 3592084 3593727 1 + 1644 FIG00937714: hypothetical protein - none -
fig|6666666.230108.peg.2269 CDS JH724260.1 3594690 3593839 -3 - 852 FIG00896412: hypothetical protein - none -
fig|6666666.230108.peg.2270 CDS JH724260.1 3595231 3594761 -1 - 471 hypothetical protein - none -
fig|6666666.230108.peg.2271 CDS JH724260.1 3595702 3595244 -1 - 459 FIG00406179: hypothetical protein - none -
fig|6666666.230108.peg.2272 CDS JH724260.1 3596223 3595699 -3 - 525 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.2273 CDS JH724260.1 3596905 3596348 -1 - 558 Rubrerythrin Oxidative stress;
Rubrerythrin
fig|6666666.230108.peg.2274 CDS JH724260.1 3597366 3596932 -3 - 435 Peroxide stress regulator; Ferric uptake regulation protein; Fe2+/Zn2+ uptake regulation proteins Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.230108.peg.2275 CDS JH724260.1 3597664 3599589 1 + 1926 NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.230108.peg.2276 CDS JH724260.1 3600693 3599863 -3 - 831 Transglycosylase - none -
fig|6666666.230108.peg.2277 CDS JH724260.1 3602834 3600705 -2 - 2130 FIG00936866: hypothetical protein - none -
fig|6666666.230108.peg.2278 CDS JH724260.1 3603714 3603169 -3 - 546 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) - none -
fig|6666666.230108.peg.2279 CDS JH724260.1 3604498 3603737 -1 - 762 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) - none -
fig|6666666.230108.peg.2280 CDS JH724260.1 3604683 3604510 -3 - 174 FIG00404525: hypothetical protein - none -
fig|6666666.230108.peg.2281 CDS JH724260.1 3605765 3604680 -2 - 1086 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) - none -
fig|6666666.230108.peg.2282 CDS JH724260.1 3606012 3605785 -3 - 228 2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3) - none -
fig|6666666.230108.peg.2283 CDS JH724260.1 3606304 3606029 -1 - 276 FIG00403100: hypothetical protein - none -
fig|6666666.230108.peg.2284 CDS JH724260.1 3606917 3606480 -2 - 438 Ribose 5-phosphate isomerase B (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.230108.peg.2285 CDS JH724260.1 3609018 3607009 -3 - 2010 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.230108.peg.2286 CDS JH724260.1 3610753 3609209 -1 - 1545 Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55) L-Arabinose utilization
fig|6666666.230108.peg.2287 CDS JH724260.1 3612375 3610777 -3 - 1599 Ribulokinase (EC 2.7.1.16) L-Arabinose utilization
fig|6666666.230108.peg.2288 CDS JH724260.1 3614008 3612500 -1 - 1509 L-arabinose isomerase (EC 5.3.1.4) L-Arabinose utilization
fig|6666666.230108.peg.2289 CDS JH724260.1 3614733 3614047 -3 - 687 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-Arabinose utilization
fig|6666666.230108.peg.2290 CDS JH724260.1 3615453 3614776 -3 - 678 Hypothetical Nudix-like regulator - none -
fig|6666666.230108.peg.2291 CDS JH724260.1 3617207 3615513 -2 - 1695 Predicted sodium-dependent galactose transporter - none -
fig|6666666.230108.peg.2292 CDS JH724260.1 3618374 3617235 -2 - 1140 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.2293 CDS JH724260.1 3618521 3618634 2 + 114 hypothetical protein - none -
fig|6666666.230108.peg.2294 CDS JH724260.1 3619795 3618641 -1 - 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.230108.peg.2295 CDS JH724260.1 3621110 3619845 -2 - 1266 Predicted glucose transporter in maltodextrin utilization gene cluster Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.2296 CDS JH724260.1 3622379 3621198 -2 - 1182 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.2297 CDS JH724260.1 3622494 3623465 3 + 972 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.230108.peg.2298 CDS JH724260.1 3623800 3623540 -1 - 261 FIG00402836: hypothetical protein - none -
fig|6666666.230108.peg.2299 CDS JH724260.1 3624166 3623813 -1 - 354 FIG00405237: hypothetical protein - none -
fig|6666666.230108.peg.2300 CDS JH724260.1 3624395 3624186 -2 - 210 FIG00403582: hypothetical protein - none -
fig|6666666.230108.peg.2301 CDS JH724260.1 3625766 3624489 -2 - 1278 ATP-dependent RNA helicase RhlE ATP-dependent RNA helicases, bacterial
fig|6666666.230108.peg.2302 CDS JH724260.1 3625938 3626345 3 + 408 FIG00407519: hypothetical protein - none -
fig|6666666.230108.peg.2303 CDS JH724260.1 3626394 3626894 3 + 501 FIG00936940: hypothetical protein - none -
fig|6666666.230108.peg.2304 CDS JH724260.1 3627432 3628256 3 + 825 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.230108.peg.2305 CDS JH724260.1 3628264 3629817 1 + 1554 Sulfate permease Cysteine Biosynthesis
fig|6666666.230108.peg.2306 CDS JH724260.1 3629839 3630444 1 + 606 Adenylylsulfate kinase (EC 2.7.1.25) Cysteine Biosynthesis
fig|6666666.230108.peg.2307 CDS JH724260.1 3630451 3631362 1 + 912 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) Cysteine Biosynthesis
fig|6666666.230108.peg.2308 CDS JH724260.1 3631403 3632866 2 + 1464 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) Cysteine Biosynthesis
fig|6666666.230108.peg.2309 CDS JH724260.1 3632922 3634028 3 + 1107 FIG00896523: hypothetical protein - none -
fig|6666666.230108.peg.2310 CDS JH724260.1 3634054 3635019 1 + 966 FIG00897664: hypothetical protein - none -
fig|6666666.230108.peg.2311 CDS JH724260.1 3635846 3635094 -2 - 753 FIG00897943: hypothetical protein - none -
fig|6666666.230108.peg.2312 CDS JH724260.1 3637097 3635973 -2 - 1125 Major outer membrane protein OmpA - none -
fig|6666666.230108.peg.2313 CDS JH724260.1 3638063 3637140 -2 - 924 FIG00408816: hypothetical protein - none -
fig|6666666.230108.peg.2314 CDS JH724260.1 3641121 3640231 -3 - 891 FIG00896374: hypothetical protein - none -
fig|6666666.230108.peg.2315 CDS JH724260.1 3641873 3641670 -2 - 204 hypothetical protein - none -
fig|6666666.230108.peg.2316 CDS JH724260.1 3642018 3642137 3 + 120 hypothetical protein - none -
fig|6666666.230108.peg.2317 CDS JH724260.1 3642202 3643218 1 + 1017 Phage integrase precursor - none -
fig|6666666.230108.peg.2318 CDS JH724260.1 3643702 3644808 1 + 1107 FIG00896374: hypothetical protein - none -
fig|6666666.230108.peg.2319 CDS JH724260.1 3644822 3645697 2 + 876 FIG00408816: hypothetical protein - none -
fig|6666666.230108.peg.2320 CDS JH724260.1 3645738 3646877 3 + 1140 Major outer membrane protein OmpA - none -
fig|6666666.230108.peg.2321 CDS JH724260.1 3647004 3647756 3 + 753 FIG00897943: hypothetical protein - none -
fig|6666666.230108.peg.2322 CDS JH724260.1 3647936 3648298 2 + 363 Putative Holliday junction resolvase YqgF - none -
fig|6666666.230108.peg.2323 CDS JH724260.1 3648342 3648899 3 + 558 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.230108.peg.2324 CDS JH724260.1 3649017 3651077 3 + 2061 TPR repeat precursor - none -
fig|6666666.230108.peg.2325 CDS JH724260.1 3651157 3653097 1 + 1941 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.230108.peg.2326 CDS JH724260.1 3653173 3653820 1 + 648 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.230108.peg.2327 CDS JH724260.1 3654186 3654536 3 + 351 LSU ribosomal protein L20p - none -
fig|6666666.230108.peg.2328 CDS JH724260.1 3656382 3655075 -3 - 1308 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) Aromatic amino acid interconversions with aryl acids
fig|6666666.230108.peg.2329 CDS JH724260.1 3656994 3656413 -3 - 582 Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8) Aromatic amino acid interconversions with aryl acids;
Indole-pyruvate oxidoreductase complex
fig|6666666.230108.peg.2330 CDS JH724260.1 3658591 3656999 -1 - 1593 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) Aromatic amino acid interconversions with aryl acids;
Indole-pyruvate oxidoreductase complex
fig|6666666.230108.peg.2331 CDS JH724260.1 3659699 3658668 -2 - 1032 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.230108.peg.2332 CDS JH724260.1 3660683 3659766 -2 - 918 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.230108.peg.2333 CDS JH724260.1 3661224 3661003 -3 - 222 hypothetical protein - none -
fig|6666666.230108.peg.2334 CDS JH724260.1 3661900 3661733 -1 - 168 hypothetical protein - none -
fig|6666666.230108.peg.2335 CDS JH724260.1 3661942 3663615 1 + 1674 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria
fig|6666666.230108.peg.2336 CDS JH724260.1 3663612 3663743 3 + 132 hypothetical protein - none -
fig|6666666.230108.peg.2337 CDS JH724260.1 3664110 3666224 3 + 2115 Polysialic acid transport protein KpsD precursor - none -
fig|6666666.230108.peg.2338 CDS JH724260.1 3666233 3667339 2 + 1107 putative protein involved in capsular polysaccharide biosynthesis - none -
fig|6666666.230108.peg.2339 CDS JH724260.1 3667336 3667665 1 + 330 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230108.peg.2340 CDS JH724260.1 3667662 3668123 3 + 462 Tryptophan synthase beta chain like (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.230108.peg.2341 CDS JH724260.1 3669370 3668198 -1 - 1173 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.230108.peg.2342 CDS JH724260.1 3669972 3669382 -3 - 591 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.230108.peg.2343 CDS JH724260.1 3670281 3671855 3 + 1575 ABC transporter ATP-binding protein uup - none -
fig|6666666.230108.peg.2344 CDS JH724260.1 3673188 3672136 -3 - 1053 FIG00404447: hypothetical protein - none -
fig|6666666.230108.peg.2345 CDS JH724260.1 3673301 3674197 2 + 897 putative metal-dependent membrane protease - none -
fig|6666666.230108.peg.2346 CDS JH724260.1 3676431 3674251 -3 - 2181 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.230108.peg.2347 CDS JH724260.1 3676540 3678417 1 + 1878 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.2348 CDS JH724260.1 3678444 3680189 3 + 1746 5@1-nucleotidase (EC 3.1.3.5); 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16); Putative UDP-sugar hydrolase (EC 3.6.1.45) CBSS-226186.1.peg.4416;
Purine conversions;
Purine conversions
fig|6666666.230108.peg.2349 CDS JH724260.1 3680229 3680573 3 + 345 FIG00410804: hypothetical protein - none -
fig|6666666.230108.peg.2350 CDS JH724260.1 3680725 3683049 1 + 2325 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.230108.peg.2351 CDS JH724260.1 3683124 3684002 3 + 879 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.2352 CDS JH724260.1 3684065 3684826 2 + 762 Creatinine amidohydrolase (EC 3.5.2.10) Creatine and Creatinine Degradation
fig|6666666.230108.peg.2353 CDS JH724260.1 3685436 3685014 -2 - 423 FIG00936914: hypothetical protein - none -
fig|6666666.230108.peg.2354 CDS JH724260.1 3686792 3685476 -2 - 1317 FIG00410646: hypothetical protein - none -
fig|6666666.230108.peg.2355 CDS JH724260.1 3688069 3686822 -1 - 1248 FIG00416648: hypothetical protein - none -
fig|6666666.230108.peg.2356 CDS JH724260.1 3688812 3688111 -3 - 702 FIG00405599: hypothetical protein - none -
fig|6666666.230108.peg.2357 CDS JH724260.1 3690085 3689009 -1 - 1077 Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase (EC 2.4.1.-) Rhamnose containing glycans
fig|6666666.230108.peg.2358 CDS JH724260.1 3691323 3690088 -3 - 1236 Putative glycosyltransferase protein CBSS-258594.1.peg.3339
fig|6666666.230108.peg.2359 CDS JH724260.1 3692434 3691334 -1 - 1101 FIG00416118: hypothetical protein - none -
fig|6666666.230108.peg.2360 CDS JH724260.1 3693642 3692440 -3 - 1203 F420H2:quinone oxidoreductase - none -
fig|6666666.230108.peg.2361 CDS JH724260.1 3694847 3693738 -2 - 1110 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230108.peg.2362 CDS JH724260.1 3696055 3694991 -1 - 1065 hypothetical protein - none -
fig|6666666.230108.peg.2363 CDS JH724260.1 3697152 3696052 -3 - 1101 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230108.peg.2364 CDS JH724260.1 3698062 3697154 -1 - 909 putative glycosyltransferase - none -
fig|6666666.230108.peg.2365 CDS JH724260.1 3698753 3698064 -2 - 690 Acetyltransferase - none -
fig|6666666.230108.peg.2366 CDS JH724260.1 3700044 3698716 -3 - 1329 hypothetical protein - none -
fig|6666666.230108.peg.2367 CDS JH724260.1 3700949 3700041 -2 - 909 Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids - none -
fig|6666666.230108.peg.2368 CDS JH724260.1 81882 81550 -3 - 333 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.230108.peg.2369 CDS JH724260.1 82814 81882 -2 - 933 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.230108.peg.2370 CDS JH724260.1 83695 82838 -1 - 858 DNA-damage-inducible protein d - none -
fig|6666666.230108.peg.2371 CDS JH724260.1 88091 83688 -2 - 4404 CRISPR-associated protein, Csn1 family CRISPRs
fig|6666666.230108.peg.2372 CDS JH724260.1 88688 89326 2 + 639 putative DNA-binding protein - none -
fig|6666666.230108.peg.2373 CDS JH724260.1 89445 90251 3 + 807 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.230108.peg.2374 CDS JH724260.1 92284 90542 -1 - 1743 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.230108.peg.2375 CDS JH724260.1 94009 92366 -1 - 1644 Probable dipeptidase (EC 3.4.-.-) - none -
fig|6666666.230108.peg.2376 CDS JH724260.1 95713 94046 -1 - 1668 FIG00407700: hypothetical protein - none -
fig|6666666.230108.peg.2377 CDS JH724260.1 95912 97018 2 + 1107 Alanine dehydrogenase (EC 1.4.1.1) Pyruvate Alanine Serine Interconversions
fig|6666666.230108.peg.2378 CDS JH724260.1 98339 97116 -2 - 1224 Permeases of the major facilitator superfamily - none -
fig|6666666.230108.peg.2379 CDS JH724260.1 98542 99978 1 + 1437 Glutamate decarboxylase (EC 4.1.1.15) - none -
fig|6666666.230108.peg.2380 CDS JH724260.1 3703880 3703749 -2 - 132 hypothetical protein - none -
fig|6666666.230108.peg.2381 CDS JH724260.1 3704133 3703873 -3 - 261 hypothetical protein - none -
fig|6666666.230108.peg.2382 CDS JH724260.1 3705961 3704408 -1 - 1554 Conserved protein, with a weak D-galactarate dehydratase/altronate hydrolase domain - none -
fig|6666666.230108.peg.2383 CDS JH724260.1 3706514 3706359 -2 - 156 hypothetical protein - none -
fig|6666666.230108.peg.2384 CDS JH724260.1 3706655 3708751 2 + 2097 FIG00414498: hypothetical protein - none -
fig|6666666.230108.peg.2385 CDS JH724260.1 3709014 3708757 -3 - 258 hypothetical protein - none -
fig|6666666.230108.peg.2386 CDS JH724260.1 3709293 3709832 3 + 540 FIG00413911: hypothetical protein - none -
fig|6666666.230108.peg.2387 CDS JH724260.1 3709924 3710037 1 + 114 hypothetical protein - none -
fig|6666666.230108.peg.2388 CDS JH724260.1 3710042 3710491 2 + 450 N-acetylmuramoyl-L-alanine amidase - none -
fig|6666666.230108.peg.2389 CDS JH724260.1 3711020 3710481 -2 - 540 Capsular polysaccharide transcription antitermination protein, UpxY family - none -
fig|6666666.230108.peg.2390 CDS JH724260.1 3713581 3711185 -1 - 2397 Tyrosine-protein kinase Wzc (EC 2.7.10.2) CBSS-258594.1.peg.3339
fig|6666666.230108.peg.2391 CDS JH724260.1 3714460 3713627 -1 - 834 Polysaccharide export outer membrane protein - none -
fig|6666666.230108.peg.2392 CDS JH724260.1 3715518 3714496 -3 - 1023 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230108.peg.2393 CDS JH724260.1 3716617 3716402 -1 - 216 Tyrosine type site-specific recombinase, Mpi regulator - none -
fig|6666666.230108.peg.2394 CDS JH724260.1 3716730 3717941 3 + 1212 Integrase - none -
fig|6666666.230108.peg.2395 CDS JH724260.1 3718245 3719390 3 + 1146 Integrase - none -
fig|6666666.230108.peg.2396 CDS JH724260.1 3719454 3720230 3 + 777 hypothetical protein - none -
fig|6666666.230108.peg.2397 CDS JH724260.1 3720444 3720740 3 + 297 putative excisionase - none -
fig|6666666.230108.peg.2398 CDS JH724260.1 3720737 3721186 2 + 450 putative excisionase - none -
fig|6666666.230108.peg.2399 CDS JH724260.1 3721183 3722271 1 + 1089 FIG00898246: hypothetical protein - none -
fig|6666666.230108.peg.2400 CDS JH724260.1 3722335 3723216 1 + 882 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230108.peg.2401 CDS JH724260.1 3723297 3724733 3 + 1437 ATP-dependent DNA helicase RecG - none -
fig|6666666.230108.peg.2402 CDS JH724260.1 3725087 3724791 -2 - 297 FIG00410669: hypothetical protein - none -
fig|6666666.230108.peg.2403 CDS JH724260.1 3726315 3725182 -3 - 1134 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.230108.peg.2404 CDS JH724260.1 3726797 3727216 2 + 420 hypothetical protein - none -
fig|6666666.230108.peg.2405 CDS JH724260.1 3727206 3727541 3 + 336 FIG00898505: hypothetical protein - none -
fig|6666666.230108.peg.2406 CDS JH724260.1 3727596 3727961 3 + 366 Conjugative transposon protein TraE Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.2407 CDS JH724260.1 3727968 3728270 3 + 303 FIG00897980: hypothetical protein - none -
fig|6666666.230108.peg.2408 CDS JH724260.1 3728456 3729811 2 + 1356 hypothetical protein - none -
fig|6666666.230108.peg.2409 CDS JH724260.1 3729833 3730246 2 + 414 hypothetical protein - none -
fig|6666666.230108.peg.2410 CDS JH724260.1 3730252 3732960 1 + 2709 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.2411 CDS JH724260.1 3732973 3733296 1 + 324 hypothetical protein - none -
fig|6666666.230108.peg.2412 CDS JH724260.1 3733388 3735886 2 + 2499 FIG00898215: hypothetical protein - none -
fig|6666666.230108.peg.2413 CDS JH724260.1 3735938 3736615 2 + 678 FIG00897793: hypothetical protein - none -
fig|6666666.230108.peg.2414 CDS JH724260.1 3736662 3737387 3 + 726 FIG00896865: hypothetical protein - none -
fig|6666666.230108.peg.2415 CDS JH724260.1 3737436 3738284 3 + 849 Phage antirepressor protein - none -
fig|6666666.230108.peg.2416 CDS JH724260.1 3738288 3739418 3 + 1131 FIG01290742: hypothetical protein - none -
fig|6666666.230108.peg.2417 CDS JH724260.1 3739498 3740112 1 + 615 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.2418 CDS JH724260.1 3740114 3740455 2 + 342 FIG00403140: hypothetical protein - none -
fig|6666666.230108.peg.2419 CDS JH724260.1 3740436 3741683 3 + 1248 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.2420 CDS JH724260.1 3741738 3742583 3 + 846 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.2421 CDS JH724260.1 3742917 3742588 -3 - 330 hypothetical protein - none -
fig|6666666.230108.peg.2422 CDS JH724260.1 3742894 3743115 1 + 222 FIG00407458: hypothetical protein - none -
fig|6666666.230108.peg.2423 CDS JH724260.1 3743187 3743933 3 + 747 FIG00403811: hypothetical protein - none -
fig|6666666.230108.peg.2424 CDS JH724260.1 3743952 3746150 3 + 2199 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.2425 CDS JH724260.1 3748376 3747501 -2 - 876 hypothetical protein - none -
fig|6666666.230108.peg.2426 CDS JH724260.1 3749320 3749123 -1 - 198 hypothetical protein - none -
fig|6666666.230108.peg.2427 CDS JH724260.1 3751211 3749538 -2 - 1674 hypothetical protein - none -
fig|6666666.230108.peg.2428 CDS JH724260.1 3752564 3751224 -2 - 1341 hypothetical protein - none -
fig|6666666.230108.peg.2429 CDS JH724260.1 3753556 3753987 1 + 432 Mobile element protein - none -
fig|6666666.230108.peg.2430 CDS JH724260.1 3754117 3754341 1 + 225 hypothetical protein - none -
fig|6666666.230108.peg.2431 CDS JH724260.1 3754305 3754577 3 + 273 hypothetical protein - none -
fig|6666666.230108.peg.2432 CDS JH724260.1 3756861 3757916 3 + 1056 CapK protein, putative - none -
fig|6666666.230108.peg.2433 CDS JH724260.1 3757918 3759105 1 + 1188 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.230108.peg.2434 CDS JH724260.1 3759172 3760014 1 + 843 COG1180: Radical SAM, Pyruvate-formate lyase-activating enzyme like - none -
fig|6666666.230108.peg.2435 CDS JH724260.1 3760036 3761001 1 + 966 Predicted protease of the collagenase family - none -
fig|6666666.230108.peg.2436 CDS JH724260.1 3761019 3761921 3 + 903 Hypothetical protein PBPRB0710 - none -
fig|6666666.230108.peg.2437 CDS JH724260.1 3761926 3762159 1 + 234 FIG00403759: hypothetical protein - none -
fig|6666666.230108.peg.2438 CDS JH724260.1 3763961 3764128 2 + 168 hypothetical protein - none -
fig|6666666.230108.peg.2439 CDS JH724260.1 3765351 3764725 -3 - 627 Mobile element protein - none -
fig|6666666.230108.peg.2440 CDS JH724260.1 3765702 3765541 -3 - 162 hypothetical protein - none -
fig|6666666.230108.peg.2441 CDS JH724260.1 3766283 3766002 -2 - 282 Mobile element protein - none -
fig|6666666.230108.peg.2442 CDS JH724260.1 3766337 3766486 2 + 150 hypothetical protein - none -
fig|6666666.230108.peg.2443 CDS JH724260.1 3767868 3766726 -3 - 1143 Biotin synthesis protein BioZ Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.230108.peg.2444 CDS JH724260.1 3768591 3767983 -3 - 609 Transcriptional regulator, TetR family - none -
fig|6666666.230108.peg.2445 CDS JH724260.1 3770774 3769767 -2 - 1008 Abortive infection bacteriophage resistance protein - none -
fig|6666666.230108.peg.2446 CDS JH724260.1 3771512 3771084 -2 - 429 Peptidase, family M23 (EC 3.4.24.-) CBSS-226186.1.peg.3994
fig|6666666.230108.peg.2447 CDS JH724260.1 3772002 3772757 3 + 756 FIG00899284: hypothetical protein - none -
fig|6666666.230108.peg.2448 CDS JH724260.1 3772760 3772999 2 + 240 FIG00897411: hypothetical protein - none -
fig|6666666.230108.peg.2449 CDS JH724260.1 3773027 3774628 2 + 1602 FIG00402755: hypothetical protein - none -
fig|6666666.230108.peg.2450 CDS JH724260.1 3774666 3776351 3 + 1686 FIG00899363: hypothetical protein - none -
fig|6666666.230108.peg.2451 CDS JH724260.1 3776366 3776851 2 + 486 FIG00408532: hypothetical protein - none -
fig|6666666.230108.peg.2452 CDS JH724260.1 3776865 3777524 3 + 660 FIG00897775: hypothetical protein - none -
fig|6666666.230108.peg.2453 CDS JH724260.1 3777543 3778229 3 + 687 FIG00899176: hypothetical protein - none -
fig|6666666.230108.peg.2454 CDS JH724260.1 3778419 3778913 3 + 495 FIG00897171: hypothetical protein - none -
fig|6666666.230108.peg.2455 CDS JH724260.1 3778968 3779921 3 + 954 hypothetical protein - none -
fig|6666666.230108.peg.2456 CDS JH724260.1 3779899 3781161 1 + 1263 hypothetical protein - none -
fig|6666666.230108.peg.2457 CDS JH724260.1 3781173 3782000 3 + 828 putative cell wall endopeptidase family protein - none -
fig|6666666.230108.peg.2458 CDS JH724260.1 3782012 3782308 2 + 297 hypothetical protein - none -
fig|6666666.230108.peg.2459 CDS JH724260.1 3782305 3784086 1 + 1782 FIG00896847: hypothetical protein - none -
fig|6666666.230108.peg.2460 CDS JH724260.1 3784114 3786750 1 + 2637 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.230108.peg.2461 CDS JH724260.1 3786790 3788304 1 + 1515 putative hemagglutinin - none -
fig|6666666.230108.peg.2462 CDS JH724260.1 3788351 3788968 2 + 618 hypothetical protein - none -
fig|6666666.230108.peg.2463 CDS JH724260.1 3788971 3790755 1 + 1785 DNA primase TraC - none -
fig|6666666.230108.peg.2464 CDS JH724260.1 3791265 3790804 -3 - 462 FIG00409343: hypothetical protein - none -
fig|6666666.230108.peg.2465 CDS JH724260.1 3791844 3791320 -3 - 525 FIG00405798: hypothetical protein - none -
fig|6666666.230108.peg.2466 CDS JH724260.1 3792265 3792918 1 + 654 hypothetical protein - none -
fig|6666666.230108.peg.2467 CDS JH724260.1 3792983 3794080 2 + 1098 hypothetical protein - none -
fig|6666666.230108.peg.2468 CDS JH724260.1 3795720 3794308 -3 - 1413 Major outer membrane protein OmpA - none -
fig|6666666.230108.peg.2469 CDS JH724260.1 3797353 3795893 -1 - 1461 FIG00898120: hypothetical protein - none -
fig|6666666.230108.peg.2470 CDS JH724260.1 3798403 3797579 -1 - 825 hypothetical protein - none -
fig|6666666.230108.peg.2471 CDS JH724260.1 3798974 3798459 -2 - 516 FIG00899205: hypothetical protein - none -
fig|6666666.230108.peg.2472 CDS JH724260.1 3799338 3798988 -3 - 351 FIG00897673: hypothetical protein - none -
fig|6666666.230108.peg.2473 CDS JH724260.1 3799785 3799339 -3 - 447 FIG00404129: hypothetical protein - none -
fig|6666666.230108.peg.2474 CDS JH724260.1 3800767 3799802 -1 - 966 FIG00896953: hypothetical protein - none -
fig|6666666.230108.peg.2475 CDS JH724260.1 3801159 3801013 -3 - 147 hypothetical protein - none -
fig|6666666.230108.peg.2476 CDS JH724260.1 3801285 3801872 3 + 588 serine type site-specific recombinase - none -
fig|6666666.230108.peg.2477 CDS JH724260.1 3802272 3801967 -3 - 306 hypothetical protein - none -
fig|6666666.230108.peg.2478 CDS JH724260.1 3802511 3802269 -2 - 243 hypothetical protein - none -
fig|6666666.230108.peg.2479 CDS JH724260.1 3802809 3802525 -3 - 285 FIG00405292: hypothetical protein - none -
fig|6666666.230108.peg.2480 CDS JH724260.1 3803276 3803434 2 + 159 hypothetical protein - none -
fig|6666666.230108.peg.2481 CDS JH724260.1 3803726 3803610 -2 - 117 hypothetical protein - none -
fig|6666666.230108.peg.2482 CDS JH724260.1 3805416 3803740 -3 - 1677 Chromosome (plasmid) partitioning protein ParB Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.230108.peg.2483 CDS JH724260.1 3805635 3805489 -3 - 147 hypothetical protein - none -
fig|6666666.230108.peg.2484 CDS JH724260.1 3805946 3806110 2 + 165 hypothetical protein - none -
fig|6666666.230108.peg.2485 CDS JH724260.1 3811246 3806213 -1 - 5034 putative DNA methylase - none -
fig|6666666.230108.peg.2486 CDS JH724260.1 3812101 3811640 -1 - 462 UPF0398 protein ABC2016 - none -
fig|6666666.230108.peg.2487 CDS JH724260.1 3812379 3812263 -3 - 117 hypothetical protein - none -
fig|6666666.230108.peg.2488 CDS JH724260.1 3812599 3812405 -1 - 195 hypothetical protein - none -
fig|6666666.230108.peg.2489 CDS JH724260.1 3812951 3812649 -2 - 303 hypothetical protein - none -
fig|6666666.230108.peg.2490 CDS JH724260.1 3813204 3812962 -3 - 243 hypothetical protein - none -
fig|6666666.230108.peg.2491 CDS JH724260.1 3813361 3813230 -1 - 132 hypothetical protein - none -
fig|6666666.230108.peg.2492 CDS JH724260.1 3813993 3813613 -3 - 381 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.230108.peg.2493 CDS JH724260.1 3814299 3814180 -3 - 120 hypothetical protein - none -
fig|6666666.230108.peg.2494 CDS JH724260.1 3814800 3815609 3 + 810 FIG00898496: hypothetical protein - none -
fig|6666666.230108.peg.2495 CDS JH724260.1 3816678 3815893 -3 - 786 Tyrosine type site-specific recombinase, Mpi regulator - none -
fig|6666666.230108.peg.2496 CDS JH724260.1 3817407 3816823 -3 - 585 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230108.peg.2497 CDS JH724260.1 3818805 3817462 -3 - 1344 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230108.peg.2498 CDS JH724260.1 3820321 3819401 -1 - 921 Mobile element protein - none -
fig|6666666.230108.peg.2499 CDS JH724260.1 3820846 3821226 1 + 381 hypothetical protein - none -
fig|6666666.230108.peg.2500 CDS JH724260.1 3821322 3821504 3 + 183 DedA protein Colicin V and Bacteriocin Production Cluster;
DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.230108.peg.2501 CDS JH724260.1 3821533 3822180 1 + 648 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.230108.peg.2502 CDS JH724260.1 3822193 3823206 1 + 1014 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.230108.peg.2503 CDS JH724260.1 3823300 3824970 1 + 1671 putative membrane protein - none -
fig|6666666.230108.peg.2504 CDS JH724260.1 3825025 3827013 1 + 1989 Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.230108.peg.2505 CDS JH724260.1 3828301 3827015 -1 - 1287 FIG00405852: hypothetical protein - none -
fig|6666666.230108.peg.2506 CDS JH724260.1 3829857 3828310 -3 - 1548 N-acetylgalactosamine-6-sulfatase - none -
fig|6666666.230108.peg.2507 CDS JH724260.1 3831571 3829913 -1 - 1659 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.230108.peg.2508 CDS JH724260.1 3834086 3831672 -2 - 2415 putative ferric aerobactin receptor - none -
fig|6666666.230108.peg.2509 CDS JH724260.1 3835183 3834107 -1 - 1077 GDP-L-fucose synthetase (EC 1.1.1.271) Capsular heptose biosynthesis
fig|6666666.230108.peg.2510 CDS JH724260.1 3836286 3835210 -3 - 1077 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) Capsular heptose biosynthesis
fig|6666666.230108.peg.2511 CDS JH724260.1 3837058 3837297 1 + 240 transposase - none -
fig|6666666.230108.peg.2512 CDS JH724260.1 3838629 3837469 -3 - 1161 Na+/H+-dicarboxylate symporter - none -
fig|6666666.230108.peg.2513 CDS JH724260.1 3838752 3840233 3 + 1482 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) Pentose phosphate pathway
fig|6666666.230108.peg.2514 CDS JH724260.1 3840248 3841747 2 + 1500 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.230108.peg.2515 CDS JH724260.1 3841744 3842460 1 + 717 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.230108.peg.2516 CDS JH724260.1 3843496 3842453 -1 - 1044 FIG00896814: hypothetical protein - none -
fig|6666666.230108.peg.2517 CDS JH724260.1 3844240 3843596 -1 - 645 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230108.peg.2518 CDS JH724260.1 3845243 3844557 -2 - 687 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.230108.peg.2519 CDS JH724260.1 3846357 3845656 -3 - 702 Two-component system response regulator - none -
fig|6666666.230108.peg.2520 CDS JH724260.1 3847421 3846354 -2 - 1068 putative two-component system sensor protein, no kinase domain - none -
fig|6666666.230108.peg.2521 CDS JH724260.1 3847451 3847630 2 + 180 hypothetical protein - none -
fig|6666666.230108.peg.2522 CDS JH724260.1 3848887 3847667 -1 - 1221 ABC transporter, permease protein - none -
fig|6666666.230108.peg.2523 CDS JH724260.1 3849687 3848941 -3 - 747 ABC transporter ATP-binding protein - none -
fig|6666666.230108.peg.2524 CDS JH724260.1 3850932 3849703 -3 - 1230 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.230108.peg.2525 CDS JH724260.1 3852345 3850945 -3 - 1401 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.230108.peg.2526 CDS JH724260.1 3852457 3852777 1 + 321 FIG00896375: hypothetical protein - none -
fig|6666666.230108.peg.2527 CDS JH724260.1 3852880 3854454 1 + 1575 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.230108.peg.2528 CDS JH724260.1 3854482 3855630 1 + 1149 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.230108.peg.2529 CDS JH724260.1 3856410 3855706 -3 - 705 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.230108.peg.2530 CDS JH724260.1 3857165 3856491 -2 - 675 OmpA family outer membrane protein - none -
fig|6666666.230108.peg.2531 CDS JH724260.1 3858594 3857266 -3 - 1329 Na+ driven multidrug efflux pump - none -
fig|6666666.230108.peg.2532 CDS JH724260.1 3860003 3858627 -2 - 1377 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.230108.peg.2533 CDS JH724260.1 3860800 3860009 -1 - 792 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.230108.peg.2534 CDS JH724260.1 3861597 3860797 -3 - 801 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.230108.peg.2535 CDS JH724260.1 3862993 3861587 -1 - 1407 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.230108.peg.2536 CDS JH724260.1 3863207 3863968 2 + 762 Short chain dehydrogenase - none -
fig|6666666.230108.peg.2537 CDS JH724260.1 3864069 3866273 3 + 2205 Alpha-galactosidase (EC 3.2.1.22) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization
fig|6666666.230108.peg.2538 CDS JH724260.1 3866828 3868525 2 + 1698 ABC transporter ATP-binding protein - none -
fig|6666666.230108.peg.2539 CDS JH724260.1 3868750 3871437 1 + 2688 Thiamin-regulated outer membrane receptor Omr1 Thiamin biosynthesis
fig|6666666.230108.peg.2540 CDS JH724260.1 3871458 3874034 3 + 2577 hypothetical protein - none -
fig|6666666.230108.peg.2541 CDS JH724260.1 3874145 3875446 2 + 1302 putative endonuclease precursor - none -
fig|6666666.230108.peg.2542 CDS JH724260.1 3875617 3876954 1 + 1338 ATP-dependent RNA helicase - none -
fig|6666666.230108.peg.2543 CDS JH724260.1 3877229 3878296 2 + 1068 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.230108.peg.2544 CDS JH724260.1 3878407 3879330 1 + 924 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.230108.peg.2545 CDS JH724260.1 3879547 3880794 1 + 1248 FIG008208: hypothetical protein - none -
fig|6666666.230108.peg.2546 CDS JH724260.1 3880929 3881504 3 + 576 Iron-sulfur flavoprotein - none -
fig|6666666.230108.peg.2547 CDS JH724260.1 3881523 3881924 3 + 402 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.230108.peg.2548 CDS JH724260.1 3881989 3882171 1 + 183 FIG00406415: hypothetical protein - none -
fig|6666666.230108.peg.2549 CDS JH724260.1 3882192 3882317 3 + 126 hypothetical protein - none -
fig|6666666.230108.peg.2550 CDS JH724260.1 3882281 3883621 2 + 1341 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230108.peg.2551 CDS JH724260.1 3884769 3883618 -3 - 1152 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.230108.peg.2552 CDS JH724260.1 3884900 3885496 2 + 597 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.230108.peg.2553 CDS JH724260.1 3885654 3886778 3 + 1125 Type II restriction enzyme HpaII (EC 3.1.21.4) - none -
fig|6666666.230108.peg.2554 CDS JH724260.1 3886843 3887406 1 + 564 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.230108.peg.2555 CDS JH724260.1 3889848 3887518 -3 - 2331 FIG00413484: hypothetical protein - none -
fig|6666666.230108.peg.2556 CDS JH724260.1 3890082 3889969 -3 - 114 hypothetical protein - none -
fig|6666666.230108.peg.2557 CDS JH724260.1 3890447 3890079 -2 - 369 Transcriptional regulator, GntR family - none -
fig|6666666.230108.peg.2558 CDS JH724260.1 3891218 3890451 -2 - 768 FIG00417121: hypothetical protein - none -
fig|6666666.230108.peg.2559 CDS JH724260.1 3892066 3891242 -1 - 825 ABC transporter, ATP-binding protein - none -
fig|6666666.230108.peg.2560 CDS JH724260.1 3892846 3892184 -1 - 663 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.230108.peg.2561 CDS JH724260.1 3895695 3892846 -3 - 2850 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.230108.peg.2562 CDS JH724260.1 3896365 3895727 -1 - 639 Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis Glutathione: Non-redox reactions
fig|6666666.230108.peg.2563 CDS JH724260.1 3897001 3896381 -1 - 621 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.230108.peg.2564 CDS JH724260.1 3897905 3897039 -2 - 867 FIG00936355: hypothetical protein - none -
fig|6666666.230108.peg.2565 CDS JH724260.1 3898187 3898017 -2 - 171 hypothetical protein - none -
fig|6666666.230108.peg.2566 CDS JH724260.1 3898526 3900742 2 + 2217 TonB-dependent outer membrane receptor - none -
fig|6666666.230108.peg.2567 CDS JH724260.1 3900792 3901082 3 + 291 Possible exported heavy-metal binding protein - none -
fig|6666666.230108.peg.2568 CDS JH724260.1 3901153 3902847 1 + 1695 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.230108.peg.2569 CDS JH724260.1 3903692 3902859 -2 - 834 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.2570 CDS JH724260.1 3906631 3903785 -1 - 2847 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.230108.peg.2571 CDS JH724260.1 3906808 3907440 1 + 633 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.230108.peg.2572 CDS JH724260.1 3907437 3908033 3 + 597 Acyl carrier protein phosphodiesterase (EC 3.1.4.14) Fatty Acid Biosynthesis FASII
fig|6666666.230108.peg.2573 CDS JH724260.1 3908994 3908161 -3 - 834 DnaD domain protein - none -
fig|6666666.230108.peg.2574 CDS JH724260.1 3909322 3909041 -1 - 282 FIG00413928: hypothetical protein - none -
fig|6666666.230108.peg.2575 CDS JH724260.1 3910551 3911087 3 + 537 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230108.peg.2576 CDS JH724260.1 3911211 3911648 3 + 438 UpdZ protein - none -
fig|6666666.230108.peg.2577 CDS JH724260.1 3911866 3912873 1 + 1008 Glycosyl transferase, group 2 family protein - none -
fig|6666666.230108.peg.2578 CDS JH724260.1 3912878 3913948 2 + 1071 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria
fig|6666666.230108.peg.2579 CDS JH724260.1 3913966 3915054 1 + 1089 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase N-linked Glycosylation in Bacteria
fig|6666666.230108.peg.2580 CDS JH724260.1 3915152 3915787 2 + 636 hypothetical protein - none -
fig|6666666.230108.peg.2581 CDS JH724260.1 3916691 3917095 2 + 405 3-hydroxyacyl-CoA dehydrogenase - none -
fig|6666666.230108.peg.2582 CDS JH724260.1 3917174 3917653 2 + 480 Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) - none -
fig|6666666.230108.peg.2583 CDS JH724260.1 3917940 3918116 3 + 177 hypothetical protein - none -
fig|6666666.230108.peg.2584 CDS JH724260.1 3918120 3919172 3 + 1053 Glutamine--scyllo-inositol transaminase( EC:2.6.1.50 ) - none -
fig|6666666.230108.peg.2585 CDS JH724260.1 3920222 3921214 2 + 993 putative glycosyltransferase - none -
fig|6666666.230108.peg.2586 CDS JH724260.1 3921276 3922739 3 + 1464 Lipopolysaccharide biosynthesis protein WzxC - none -
fig|6666666.230108.peg.2587 CDS JH724260.1 3922764 3923933 3 + 1170 hypothetical protein - none -
fig|6666666.230108.peg.2588 CDS JH724260.1 3923930 3924766 2 + 837 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.230108.peg.2589 CDS JH724260.1 3924801 3925631 3 + 831 hypothetical protein - none -
fig|6666666.230108.peg.2590 CDS JH724260.1 3925637 3927370 2 + 1734 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) - none -
fig|6666666.230108.peg.2591 CDS JH724260.1 3927403 3928506 1 + 1104 glycosyl transferase group 1 - none -
fig|6666666.230108.peg.2592 CDS JH724260.1 3928511 3929680 2 + 1170 hypothetical protein - none -
fig|6666666.230108.peg.2593 CDS JH724260.1 3930166 3930774 1 + 609 Lipid carrier : UDP-N-acetylgalactosaminyltransferase (EC 2.4.1.-) CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria
fig|6666666.230108.peg.2594 CDS JH724260.1 3930789 3931424 3 + 636 4-amino-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) acetyltrasferase N-linked Glycosylation in Bacteria
fig|6666666.230108.peg.2595 CDS JH724260.1 3931461 3931691 3 + 231 putative acyl carrier protein - none -
fig|6666666.230108.peg.2596 CDS JH724260.1 3931697 3932443 2 + 747 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.230108.peg.2597 CDS JH724260.1 3932460 3933518 3 + 1059 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.230108.peg.2598 CDS JH724260.1 3933565 3935052 1 + 1488 Fatty-acid-CoA ligase FadD7 - none -
fig|6666666.230108.peg.2599 CDS JH724260.1 3935068 3935319 1 + 252 hypothetical protein - none -
fig|6666666.230108.peg.2600 CDS JH724260.1 3935327 3936277 2 + 951 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.39) - none -
fig|6666666.230108.peg.2601 CDS JH724260.1 3936456 3936304 -3 - 153 hypothetical protein - none -
fig|6666666.230108.peg.2602 CDS JH724260.1 3936681 3937196 3 + 516 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.230108.peg.2603 CDS JH724260.1 3937200 3937340 3 + 141 hypothetical protein - none -
fig|6666666.230108.peg.2604 CDS JH724260.1 3937364 3938524 2 + 1161 predicted dehydrogenase and related proteins - none -
fig|6666666.230108.peg.2605 CDS JH724260.1 3938527 3939561 1 + 1035 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.230108.peg.2606 CDS JH724260.1 3939558 3939773 3 + 216 hypothetical protein - none -
fig|6666666.230108.peg.2607 CDS JH724260.1 3939776 3940474 2 + 699 Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis Glutathione: Non-redox reactions
fig|6666666.230108.peg.2608 CDS JH724260.1 3941034 3941345 3 + 312 Degenerate transposase - none -
fig|6666666.230108.peg.2609 CDS JH724260.1 3941509 3942405 1 + 897 hypothetical protein - none -
fig|6666666.230108.peg.2610 CDS JH724260.1 3942357 3942593 3 + 237 hypothetical protein - none -
fig|6666666.230108.peg.2611 CDS JH724260.1 3943167 3943766 3 + 600 hypothetical - none -
fig|6666666.230108.peg.2612 CDS JH724260.1 3943905 3943768 -3 - 138 hypothetical protein - none -
fig|6666666.230108.peg.2613 CDS JH724260.1 3943873 3945123 1 + 1251 Lipopolysaccharide biosynthesis protein RffA - none -
fig|6666666.230108.peg.2614 CDS JH724260.1 3945156 3945287 3 + 132 hypothetical protein - none -
fig|6666666.230108.peg.2615 CDS JH724260.1 3945598 3946098 1 + 501 putative non-specific DNA-binding protein - none -
fig|6666666.230108.peg.2616 CDS JH724260.1 3946379 3948841 2 + 2463 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.230108.peg.2617 CDS JH724260.1 3948887 3949624 2 + 738 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.230108.peg.2618 CDS JH724260.1 3949624 3949869 1 + 246 FIG00409633: hypothetical protein - none -
fig|6666666.230108.peg.2619 CDS JH724260.1 3949996 3951261 1 + 1266 Manganese transport protein MntH - none -
fig|6666666.230108.peg.2620 CDS JH724260.1 3951294 3952058 3 + 765 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.230108.peg.2621 CDS JH724260.1 3952055 3952525 2 + 471 FIG00406685: hypothetical protein - none -
fig|6666666.230108.peg.2622 CDS JH724260.1 3952676 3952876 2 + 201 FIG00404895: hypothetical protein - none -
fig|6666666.230108.peg.2623 CDS JH724260.1 3953001 3954782 3 + 1782 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.230108.peg.2624 CDS JH724260.1 3954822 3956141 3 + 1320 Na+/H+ antiporter NhaA type NhaA, NhaD and Sodium-dependent phosphate transporters
fig|6666666.230108.peg.2625 CDS JH724260.1 3956408 3956223 -2 - 186 hypothetical protein - none -
fig|6666666.230108.peg.2626 CDS JH724260.1 3956301 3958610 3 + 2310 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.2627 CDS JH724260.1 3958719 3962120 3 + 3402 OmpA-related protein - none -
fig|6666666.230108.peg.2628 CDS JH724260.1 3962233 3962117 -1 - 117 hypothetical protein - none -
fig|6666666.230108.peg.2629 CDS JH724260.1 3963305 3962220 -2 - 1086 FIG00415799: hypothetical protein - none -
fig|6666666.230108.peg.2630 CDS JH724260.1 3964271 3963315 -2 - 957 glycerate dehydrogenase - none -
fig|6666666.230108.peg.2631 CDS JH724260.1 3965633 3964362 -2 - 1272 ATPase, AAA family - none -
fig|6666666.230108.peg.2632 CDS JH724260.1 3968231 3965646 -2 - 2586 FIG00937290: hypothetical protein - none -
fig|6666666.230108.peg.2633 CDS JH724260.1 3968418 3968272 -3 - 147 hypothetical protein - none -
fig|6666666.230108.peg.2634 CDS JH724260.1 3969625 3968531 -1 - 1095 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230108.peg.2635 CDS JH724260.1 3969771 3970397 3 + 627 FIG00405553: hypothetical protein - none -
fig|6666666.230108.peg.2636 CDS JH724260.1 3973489 3970586 -1 - 2904 FIG00403256: hypothetical protein - none -
fig|6666666.230108.peg.2637 CDS JH724260.1 3973762 3974265 1 + 504 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.2638 CDS JH724260.1 3974409 3976187 3 + 1779 Pyruvate carboxylase (EC 6.4.1.1) / Biotin carboxyl carrier protein Fatty Acid Biosynthesis FASII
fig|6666666.230108.peg.2639 CDS JH724260.1 3978966 3976276 -3 - 2691 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.2640 CDS JH724260.1 3980173 3978983 -1 - 1191 Glycosyl transferase, group 2 family protein - none -
fig|6666666.230108.peg.2641 CDS JH724260.1 3980186 3980305 2 + 120 hypothetical protein - none -
fig|6666666.230108.peg.2642 CDS JH724260.1 3981623 3980421 -2 - 1203 Outer membrane protein/protective antigen OMA87 - none -
fig|6666666.230108.peg.2643 CDS JH724260.1 3981773 3981657 -2 - 117 hypothetical protein - none -
fig|6666666.230108.peg.2644 CDS JH724260.1 3981783 3983183 3 + 1401 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.230108.peg.2645 CDS JH724260.1 3983404 3984753 1 + 1350 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230108.peg.2646 CDS JH724260.1 3984807 3985976 3 + 1170 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230108.peg.2647 CDS JH724260.1 3985991 3986680 2 + 690 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230108.peg.2648 CDS JH724260.1 3986685 3987323 3 + 639 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230108.peg.2649 CDS JH724260.1 3987437 3988063 2 + 627 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230108.peg.2650 CDS JH724260.1 3988081 3989355 1 + 1275 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230108.peg.2651 CDS JH724260.1 3990851 3989619 -2 - 1233 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.230108.peg.2652 CDS JH724260.1 3991727 3990873 -2 - 855 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.230108.peg.2653 CDS JH724260.1 3995251 3991829 -1 - 3423 Exonuclease SbcC DNA repair, bacterial;
Rad50-Mre11 DNA repair cluster
fig|6666666.230108.peg.2654 CDS JH724260.1 3996478 3995267 -1 - 1212 Exonuclease SbcD DNA repair, bacterial;
Rad50-Mre11 DNA repair cluster
fig|6666666.230108.peg.2655 CDS JH724260.1 3997135 3996506 -1 - 630 hypothetical protein - none -
fig|6666666.230108.peg.2656 CDS JH724260.1 3997436 3998488 2 + 1053 FIG00415761: hypothetical protein - none -
fig|6666666.230108.peg.2657 CDS JH724260.1 3998582 3998911 2 + 330 FIG00408424: hypothetical protein - none -
fig|6666666.230108.peg.2658 CDS JH724260.1 3998916 3999797 3 + 882 aldose epimerase family protein - none -
fig|6666666.230108.peg.2659 CDS JH724260.1 3999902 4001044 2 + 1143 Protein AraJ precursor L-Arabinose utilization
fig|6666666.230108.peg.2660 CDS JH724260.1 4001102 4001536 2 + 435 FIG00403019: hypothetical protein - none -
fig|6666666.230108.peg.2661 CDS JH724260.1 4001547 4001960 3 + 414 hypothetical protein - none -
fig|6666666.230108.peg.2662 CDS JH724260.1 4002937 4002026 -1 - 912 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.230108.peg.2663 CDS JH724260.1 4004419 4002998 -1 - 1422 RNA methyltransferase, TrmA family - none -
fig|6666666.230108.peg.2664 CDS JH724260.1 4004623 4007346 1 + 2724 Pyruvate,phosphate dikinase (EC 2.7.9.1) Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230108.peg.2665 CDS JH724260.1 4007549 4009045 2 + 1497 Integrase - none -
fig|6666666.230108.peg.2666 CDS JH724260.1 4009350 4009138 -3 - 213 hypothetical protein - none -
fig|6666666.230108.peg.2667 CDS JH724260.1 4010104 4009946 -1 - 159 hypothetical protein - none -
fig|6666666.230108.peg.2668 CDS JH724260.1 4010142 4010288 3 + 147 hypothetical protein - none -
fig|6666666.230108.peg.2669 CDS JH724260.1 4010260 4010610 1 + 351 FIG00409533: hypothetical protein - none -
fig|6666666.230108.peg.2670 CDS JH724260.1 4010729 4012294 2 + 1566 FIG00412116: hypothetical protein - none -
fig|6666666.230108.peg.2671 CDS JH724260.1 4012806 4012934 3 + 129 hypothetical protein - none -
fig|6666666.230108.peg.2672 CDS JH724260.1 4013214 4013086 -3 - 129 hypothetical protein - none -
fig|6666666.230108.peg.2673 CDS JH724260.1 4015770 4014136 -3 - 1635 hypothetical protein - none -
fig|6666666.230108.peg.2674 CDS JH724260.1 4015894 4015775 -1 - 120 hypothetical protein - none -
fig|6666666.230108.peg.2675 CDS JH724260.1 4018812 4016410 -3 - 2403 hypothetical protein - none -
fig|6666666.230108.peg.2676 CDS JH724260.1 4019783 4018809 -2 - 975 DNA-binding protein SMUBP-2 - none -
fig|6666666.230108.peg.2677 CDS JH724260.1 4022155 4021337 -1 - 819 hypothetical protein - none -
fig|6666666.230108.peg.2678 CDS JH724260.1 4022719 4022907 1 + 189 hypothetical protein - none -
fig|6666666.230108.peg.2679 CDS JH724260.1 4023803 4024162 2 + 360 hypothetical protein - none -
fig|6666666.230108.peg.2680 CDS JH724260.1 4024262 4024645 2 + 384 hypothetical protein - none -
fig|6666666.230108.peg.2681 CDS JH724260.1 4024863 4024642 -3 - 222 hypothetical protein - none -
fig|6666666.230108.peg.2682 CDS JH724260.1 4025628 4026188 3 + 561 putative ribose phosphate pyrophosphokinase - none -
fig|6666666.230108.peg.2683 CDS JH724260.1 4026193 4026681 1 + 489 UPF0398 protein ABC2016 - none -
fig|6666666.230108.peg.2684 CDS JH724260.1 4026797 4027696 2 + 900 putative transcriptional regulator - none -
fig|6666666.230108.peg.2685 CDS JH724260.1 4029569 4028406 -2 - 1164 hypothetical protein - none -
fig|6666666.230108.peg.2686 CDS JH724260.1 4030920 4029823 -3 - 1098 hypothetical protein - none -
fig|6666666.230108.peg.2687 CDS JH724260.1 4032259 4030904 -1 - 1356 hypothetical protein - none -
fig|6666666.230108.peg.2688 CDS JH724260.1 4035482 4032291 -2 - 3192 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230108.peg.2689 CDS JH724260.1 4036282 4035965 -1 - 318 hypothetical protein - none -
fig|6666666.230108.peg.2690 CDS JH724260.1 4036492 4036301 -1 - 192 hypothetical protein - none -
fig|6666666.230108.peg.2691 CDS JH724260.1 4036778 4037089 2 + 312 hypothetical protein - none -
fig|6666666.230108.peg.2692 CDS JH724260.1 4037577 4038461 3 + 885 two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.2693 CDS JH724260.1 4039089 4038481 -3 - 609 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.230108.peg.2694 CDS JH724260.1 4039876 4039256 -1 - 621 Superoxide dismutase [Fe] (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.230108.peg.2695 CDS JH724260.1 4040021 4042375 2 + 2355 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.230108.peg.2696 CDS JH724260.1 4042517 4043662 2 + 1146 Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) Polyamine Metabolism
fig|6666666.230108.peg.2697 CDS JH724260.1 4045053 4044457 -3 - 597 FIG00413602: hypothetical protein - none -
fig|6666666.230108.peg.2698 CDS JH724260.1 4045673 4045065 -2 - 609 GTP-binding protein EngB Universal GTPases
fig|6666666.230108.peg.2699 CDS JH724260.1 4045806 4045654 -3 - 153 hypothetical protein - none -
fig|6666666.230108.peg.2700 CDS JH724260.1 4045849 4046466 1 + 618 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.230108.peg.2701 CDS JH724260.1 4046516 4046974 2 + 459 FIG01255190: hypothetical protein - none -
fig|6666666.230108.peg.2702 CDS JH724260.1 4046988 4047524 3 + 537 Spermidine N1-acetyltransferase (EC 2.3.1.57) Polyamine Metabolism
fig|6666666.230108.peg.2703 CDS JH724260.1 4047963 4047517 -3 - 447 Transcriptional regulator, ArsR family - none -
fig|6666666.230108.peg.2704 CDS JH724260.1 4049924 4053031 2 + 3108 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.2705 CDS JH724260.1 4053079 4054632 1 + 1554 FIG00897230: hypothetical protein - none -
fig|6666666.230108.peg.2706 CDS JH724260.1 4055977 4054661 -1 - 1317 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230108.peg.2707 CDS JH724260.1 4056500 4057495 2 + 996 Flavoredoxin - none -
fig|6666666.230108.peg.2708 CDS JH724260.1 4057507 4058322 1 + 816 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) - none -
fig|6666666.230108.peg.2709 CDS JH724260.1 4058518 4059081 1 + 564 Maltose O-acetyltransferase (EC 2.3.1.79) Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.2710 CDS JH724260.1 4059164 4059964 2 + 801 FIG00898920: hypothetical protein - none -
fig|6666666.230108.peg.2711 CDS JH724260.1 4059961 4061130 1 + 1170 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230108.peg.2712 CDS JH724260.1 4061526 4061107 -3 - 420 FIG00407325: hypothetical protein - none -
fig|6666666.230108.peg.2713 CDS JH724260.1 4062505 4061621 -1 - 885 transcriptional regulator - none -
fig|6666666.230108.peg.2714 CDS JH724260.1 4062811 4062509 -1 - 303 hypothetical protein - none -
fig|6666666.230108.peg.2715 CDS JH724260.1 4062833 4063876 2 + 1044 Fucose permease - none -
fig|6666666.230108.peg.2716 CDS JH724260.1 4064350 4063868 -1 - 483 Chromate transport protein - none -
fig|6666666.230108.peg.2717 CDS JH724260.1 4064940 4064389 -3 - 552 Chromate transport protein - none -
fig|6666666.230108.peg.2718 CDS JH724260.1 4065133 4065528 1 + 396 FIG00406930: hypothetical protein - none -
fig|6666666.230108.peg.2719 CDS JH724260.1 4065531 4066820 3 + 1290 Co-activator of prophage gene expression IbrA IbrA and IbrB: co-activators of prophage gene expression
fig|6666666.230108.peg.2720 CDS JH724260.1 4066817 4067350 2 + 534 Co-activator of prophage gene expression IbrB IbrA and IbrB: co-activators of prophage gene expression
fig|6666666.230108.peg.2721 CDS JH724260.1 4067516 4068451 2 + 936 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) CBSS-296591.1.peg.2330;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230108.peg.2722 CDS JH724260.1 4068493 4069620 1 + 1128 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.2723 CDS JH724260.1 4072632 4069741 -3 - 2892 FIG00403299: hypothetical protein - none -
fig|6666666.230108.peg.2724 CDS JH724260.1 4075975 4072676 -1 - 3300 Helicase - none -
fig|6666666.230108.peg.2725 CDS JH724260.1 4076248 4076108 -1 - 141 Choloylglycine hydrolase (EC 3.5.1.24) Bile hydrolysis
fig|6666666.230108.peg.2726 CDS JH724260.1 4078328 4077387 -2 - 942 Choloylglycine hydrolase (EC 3.5.1.24) Bile hydrolysis
fig|6666666.230108.peg.2727 CDS JH724260.1 4080476 4078416 -2 - 2061 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.230108.peg.2728 CDS JH724260.1 4080620 4081891 2 + 1272 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) Aromatic amino acid interconversions with aryl acids
fig|6666666.230108.peg.2729 CDS JH724260.1 4081944 4082369 3 + 426 Amino acid-binding ACT Aromatic amino acid interconversions with aryl acids
fig|6666666.230108.peg.2730 CDS JH724260.1 4082559 4083380 3 + 822 lipoprotein protein, putative - none -
fig|6666666.230108.peg.2731 CDS JH724260.1 4083422 4083757 2 + 336 FIG00936941: hypothetical protein - none -
fig|6666666.230108.peg.2732 CDS JH724260.1 4083757 4084218 1 + 462 FIG00897728: hypothetical protein - none -
fig|6666666.230108.peg.2733 CDS JH724260.1 4085090 4084389 -2 - 702 FIG00897535: hypothetical protein - none -
fig|6666666.230108.peg.2734 CDS JH724260.1 4086957 4085164 -3 - 1794 LysM-repeat proteins and domains - none -
fig|6666666.230108.peg.2735 CDS JH724260.1 4087147 4089981 1 + 2835 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.230108.peg.2736 CDS JH724260.1 4089996 4090478 3 + 483 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.230108.peg.2737 CDS JH724260.1 4090596 4092116 3 + 1521 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.230108.peg.2738 CDS JH724260.1 4092703 4092206 -1 - 498 GCN5-related N-acetyltransferase - none -
fig|6666666.230108.peg.2739 CDS JH724260.1 4092832 4094271 1 + 1440 Periplasmic [Fe] hydrogenase (EC 1.12.7.2) - none -
fig|6666666.230108.peg.2740 CDS JH724260.1 4094276 4095346 2 + 1071 [FeFe]-hydrogenase maturation protein HydE - none -
fig|6666666.230108.peg.2741 CDS JH724260.1 4095399 4096817 3 + 1419 2-iminoacetate synthase (ThiH) (EC 4.1.99.19) - none -
fig|6666666.230108.peg.2742 CDS JH724260.1 4096829 4098037 2 + 1209 [FeFe]-hydrogenase maturation GTPase HydF - none -
fig|6666666.230108.peg.2743 CDS JH724260.1 4098520 4098044 -1 - 477 NAD-reducing hydrogenase subunit HoxE (EC 1.12.1.2) - none -
fig|6666666.230108.peg.2744 CDS JH724260.1 4100308 4098542 -1 - 1767 NADP-reducing [Fe]-hydrogenase, cytoplasmic, alpha subunit (EC 1.12.1.4) - none -
fig|6666666.230108.peg.2745 CDS JH724260.1 4102228 4100321 -1 - 1908 NAD-reducing hydrogenase subunit HoxF (EC 1.12.1.2) - none -
fig|6666666.230108.peg.2746 CDS JH724260.1 4102547 4102873 2 + 327 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.230108.peg.2747 CDS JH724260.1 4102956 4104065 3 + 1110 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230108.peg.2748 CDS JH724260.1 4104902 4105144 2 + 243 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230108.peg.2749 CDS JH724260.1 4105180 4105668 1 + 489 UpdZ protein - none -
fig|6666666.230108.peg.2750 CDS JH724260.1 4105682 4106704 2 + 1023 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria
fig|6666666.230108.peg.2751 CDS JH724260.1 4106701 4107864 1 + 1164 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) - none -
fig|6666666.230108.peg.2752 CDS JH724260.1 4107861 4108544 3 + 684 N-Acetylneuraminate cytidylyltransferase (EC 2.7.7.43) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230108.peg.2753 CDS JH724260.1 4108549 4109526 1 + 978 N-Acetylneuraminate cytidylyltransferase (EC 2.7.7.43) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230108.peg.2754 CDS JH724260.1 4109517 4109969 3 + 453 FIG00387988: hypothetical protein - none -
fig|6666666.230108.peg.2755 CDS JH724260.1 4110139 4110450 1 + 312 FIG00387988: hypothetical protein - none -
fig|6666666.230108.peg.2756 CDS JH724260.1 4110447 4111586 3 + 1140 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain protein - none -
fig|6666666.230108.peg.2757 CDS JH724260.1 4111594 4112610 1 + 1017 N-acetylneuraminate synthase (EC 2.5.1.56) CMP-N-acetylneuraminate Biosynthesis;
Sialic Acid Metabolism
fig|6666666.230108.peg.2758 CDS JH724260.1 4113110 4112748 -2 - 363 N-acetylmuramoyl-L-alanine amidase - none -
fig|6666666.230108.peg.2759 CDS JH724260.1 4113132 4113287 3 + 156 hypothetical protein - none -
fig|6666666.230108.peg.2760 CDS JH724260.1 4113772 4113311 -1 - 462 FIG00415943: hypothetical protein - none -
fig|6666666.230108.peg.2761 CDS JH724260.1 4114005 4114223 3 + 219 FIG00417360: hypothetical protein - none -
fig|6666666.230108.peg.2762 CDS JH724260.1 4116123 4114348 -3 - 1776 FIG00896590: hypothetical protein - none -
fig|6666666.230108.peg.2763 CDS JH724260.1 4116777 4116175 -3 - 603 FIG00407803: hypothetical protein - none -
fig|6666666.230108.peg.2764 CDS JH724260.1 4117374 4118126 3 + 753 Serine--glyoxylate aminotransferase (EC 2.6.1.45) Glycerate metabolism;
Serine-glyoxylate cycle
fig|6666666.230108.peg.2765 CDS JH724260.1 4118522 4119832 2 + 1311 Phosphoenolpyruvate phosphomutase (EC 5.4.2.9) Phosphoenolpyruvate phosphomutase
fig|6666666.230108.peg.2766 CDS JH724260.1 4119867 4120994 3 + 1128 Phosphonopyruvate decarboxylase (EC 4.1.1.82) Phosphoenolpyruvate phosphomutase
fig|6666666.230108.peg.2767 CDS JH724260.1 4120998 4121726 3 + 729 Serine/threonine protein phosphatase (EC 3.1.3.16) - none -
fig|6666666.230108.peg.2768 CDS JH724260.1 4121727 4122722 3 + 996 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) CBSS-296591.1.peg.2330;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230108.peg.2769 CDS JH724260.1 4122728 4123459 2 + 732 hypothetical protein - none -
fig|6666666.230108.peg.2770 CDS JH724260.1 4123462 4124475 1 + 1014 membrane protein, putative - none -
fig|6666666.230108.peg.2771 CDS JH724260.1 4124532 4125650 3 + 1119 hypothetical protein - none -
fig|6666666.230108.peg.2772 CDS JH724260.1 4126466 4127599 2 + 1134 Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39) Rhamnose containing glycans
fig|6666666.230108.peg.2773 CDS JH724260.1 4127644 4128720 1 + 1077 EpsK - none -
fig|6666666.230108.peg.2774 CDS JH724260.1 4128743 4129717 2 + 975 hypothetical protein - none -
fig|6666666.230108.peg.2775 CDS JH724260.1 4129737 4130987 3 + 1251 Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids - none -
fig|6666666.230108.peg.2776 CDS JH724260.1 4130987 4131823 2 + 837 Lipopolysaccharide cholinephosphotransferase LicD1 (EC 2.7.8.-) - none -
fig|6666666.230108.peg.2777 CDS JH724260.1 4131837 4133024 3 + 1188 glycosyltransferase - none -
fig|6666666.230108.peg.2778 CDS JH724260.1 4133063 4133893 2 + 831 putative glycosyltransferase - none -
fig|6666666.230108.peg.2779 CDS JH724260.1 4134015 4134995 3 + 981 UDP-glucose 4-epimerase (EC 5.1.3.2) CBSS-296591.1.peg.2330;
Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.230108.peg.2780 CDS JH724260.1 4135873 4135013 -1 - 861 hypothetical protein - none -
fig|6666666.230108.peg.2781 CDS JH724260.1 4135934 4136884 2 + 951 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.230108.peg.2782 CDS JH724260.1 4136991 4136836 -3 - 156 hypothetical protein - none -
fig|6666666.230108.peg.2783 CDS JH724260.1 4137013 4138578 1 + 1566 hypothetical protein - none -
fig|6666666.230108.peg.2784 CDS JH724260.1 4139436 4138657 -3 - 780 probable lipoprotein YPO2292 - none -
fig|6666666.230108.peg.2785 CDS JH724260.1 4142764 4139543 -1 - 3222 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.2786 CDS JH724260.1 4143660 4142773 -3 - 888 Xylanase Xylose utilization
fig|6666666.230108.peg.2787 CDS JH724260.1 4145670 4143679 -3 - 1992 Oligopeptide transporter, OPT family - none -
fig|6666666.230108.peg.2788 CDS JH724260.1 4146272 4145853 -2 - 420 FIG00413813: hypothetical protein - none -
fig|6666666.230108.peg.2789 CDS JH724260.1 4147053 4146340 -3 - 714 Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2790 CDS JH724260.1 4147170 4148027 3 + 858 transcriptional regulator - none -
fig|6666666.230108.peg.2791 CDS JH724260.1 4148118 4148708 3 + 591 membrane protein ykgB - none -
fig|6666666.230108.peg.2792 CDS JH724260.1 4148713 4150068 1 + 1356 Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4); Mercuric ion reductase (EC 1.16.1.1); PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase Mercuric reductase;
Mercuric reductase;
Mercury resistance operon;
TCA Cycle
fig|6666666.230108.peg.2793 CDS JH724260.1 4150171 4151340 1 + 1170 Vitamin B12 ABC transporter, B12-binding component BtuF Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2794 CDS JH724260.1 4151364 4152377 3 + 1014 Vitamin B12 ABC transporter, permease component BtuC Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2795 CDS JH724260.1 4152370 4153389 1 + 1020 Ferric enterobactin transport ATP-binding protein FepC (TC 3.A.1.14.2) - none -
fig|6666666.230108.peg.2796 CDS JH724260.1 4153458 4154765 3 + 1308 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230108.peg.2797 CDS JH724260.1 4155909 4154779 -3 - 1131 Choloylglycine hydrolase (EC 3.5.1.24) Bile hydrolysis
fig|6666666.230108.peg.2798 CDS JH724260.1 4156606 4155932 -1 - 675 hypothetical protein - none -
fig|6666666.230108.peg.2799 CDS JH724260.1 4158498 4156603 -3 - 1896 Cobalt-precorrin-6x reductase (EC 1.3.1.54) / Cobalt-precorrin-6 synthase, anaerobic Cobalamin synthesis;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2800 CDS JH724260.1 4160384 4158531 -2 - 1854 Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) Cobalamin synthesis;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2801 CDS JH724260.1 4161637 4160396 -1 - 1242 Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2802 CDS JH724260.1 4163179 4161764 -1 - 1416 Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) Cobalamin synthesis;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2803 CDS JH724260.1 4164172 4163273 -1 - 900 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.2804 CDS JH724260.1 4165206 4164382 -3 - 825 Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2805 CDS JH724260.1 4167310 4165241 -1 - 2070 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.2806 CDS JH724260.1 4167707 4167426 -2 - 282 FIG00935708: hypothetical protein - none -
fig|6666666.230108.peg.2807 CDS JH724260.1 4168385 4167780 -2 - 606 hypothetical transporter PduT for various metalloporphyrins - none -
fig|6666666.230108.peg.2808 CDS JH724260.1 4168976 4168419 -2 - 558 FIG00402742: hypothetical protein - none -
fig|6666666.230108.peg.2809 CDS JH724260.1 4172904 4168993 -3 - 3912 CobN/magnesium chelatase family protein - none -
fig|6666666.230108.peg.2810 CDS JH724260.1 4174434 4172920 -3 - 1515 Optional hypothetical component of the B12 transporter BtuN Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2811 CDS JH724260.1 4175451 4174504 -3 - 948 Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2812 CDS JH724260.1 4176773 4175469 -2 - 1305 FIG00897953: hypothetical protein - none -
fig|6666666.230108.peg.2813 CDS JH724260.1 4179155 4176795 -2 - 2361 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.2814 CDS JH724260.1 4179666 4179496 -3 - 171 hypothetical protein - none -
fig|6666666.230108.peg.2815 CDS JH724260.1 4179868 4181379 1 + 1512 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) Fatty Acid Biosynthesis FASII
fig|6666666.230108.peg.2816 CDS JH724260.1 4181411 4181926 2 + 516 Biotin carboxyl carrier protein of acetyl-CoA carboxylase; Biotin carboxyl carrier protein Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII
fig|6666666.230108.peg.2817 CDS JH724260.1 4181981 4183513 2 + 1533 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) / Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2); Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) Colicin V and Bacteriocin Production Cluster;
Fatty Acid Biosynthesis FASII;
Fatty Acid Biosynthesis FASII;
Serine-glyoxylate cycle
fig|6666666.230108.peg.2818 CDS JH724260.1 4183641 4185326 3 + 1686 Predicted cobalt transporter in Bacteroides_Porphyromonas Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2819 CDS JH724260.1 4186162 4185422 -1 - 741 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230108.peg.2820 CDS JH724260.1 4187618 4186188 -2 - 1431 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases - none -
fig|6666666.230108.peg.2821 CDS JH724260.1 4187713 4189101 1 + 1389 Cobyrinic acid A,C-diamide synthase Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2822 CDS JH724260.1 4189270 4190316 1 + 1047 FIG00405311: hypothetical protein - none -
fig|6666666.230108.peg.2823 CDS JH724260.1 4190538 4190413 -3 - 126 hypothetical protein - none -
fig|6666666.230108.peg.2824 CDS JH724260.1 4191152 4191039 -2 - 114 hypothetical protein - none -
fig|6666666.230108.peg.2825 CDS JH724260.1 4191431 4191733 2 + 303 hypothetical protein - none -
fig|6666666.230108.peg.2826 CDS JH724260.1 4191833 4192162 2 + 330 FIG00937196: hypothetical protein - none -
fig|6666666.230108.peg.2827 CDS JH724260.1 4192177 4192437 1 + 261 FIG00404705: hypothetical protein - none -
fig|6666666.230108.peg.2828 CDS JH724260.1 4192434 4192589 3 + 156 hypothetical protein - none -
fig|6666666.230108.peg.2829 CDS JH724260.1 4192919 4192749 -2 - 171 hypothetical protein - none -
fig|6666666.230108.peg.2830 CDS JH724260.1 4193135 4193515 2 + 381 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.230108.peg.2831 CDS JH724260.1 4194004 4194537 1 + 534 FIG00405798: hypothetical protein - none -
fig|6666666.230108.peg.2832 CDS JH724260.1 4195014 4195310 3 + 297 FIG00410669: hypothetical protein - none -
fig|6666666.230108.peg.2833 CDS JH724260.1 4195731 4196231 3 + 501 FIG00411713: hypothetical protein - none -
fig|6666666.230108.peg.2834 CDS JH724260.1 4196720 4196974 2 + 255 conserved hypothetical protein related to phage - none -
fig|6666666.230108.peg.2835 CDS JH724260.1 4197379 4197203 -1 - 177 hypothetical protein - none -
fig|6666666.230108.peg.2836 CDS JH724260.1 4197509 4198126 2 + 618 hypothetical protein - none -
fig|6666666.230108.peg.2837 CDS JH724260.1 4198287 4198171 -3 - 117 hypothetical protein - none -
fig|6666666.230108.peg.2838 CDS JH724260.1 4198270 4198449 1 + 180 hypothetical protein - none -
fig|6666666.230108.peg.2839 CDS JH724260.1 4199261 4198494 -2 - 768 serine type site-specific recombinase - none -
fig|6666666.230108.peg.2840 CDS JH724260.1 4199752 4200423 1 + 672 FIG00896953: hypothetical protein - none -
fig|6666666.230108.peg.2841 CDS JH724260.1 4200442 4200888 1 + 447 FIG00404129: hypothetical protein - none -
fig|6666666.230108.peg.2842 CDS JH724260.1 4200923 4201294 2 + 372 FIG00897673: hypothetical protein - none -
fig|6666666.230108.peg.2843 CDS JH724260.1 4201291 4201848 1 + 558 FIG00899205: hypothetical protein - none -
fig|6666666.230108.peg.2844 CDS JH724260.1 4201867 4202733 1 + 867 hypothetical protein - none -
fig|6666666.230108.peg.2845 CDS JH724260.1 4202867 4204396 2 + 1530 FIG00898120: hypothetical protein - none -
fig|6666666.230108.peg.2846 CDS JH724260.1 4204450 4205892 1 + 1443 putative outer membrane protein - none -
fig|6666666.230108.peg.2847 CDS JH724260.1 4206195 4206022 -3 - 174 hypothetical protein - none -
fig|6666666.230108.peg.2848 CDS JH724260.1 4206665 4207135 2 + 471 FIG00409343: hypothetical protein - none -
fig|6666666.230108.peg.2849 CDS JH724260.1 4207772 4208143 2 + 372 hypothetical protein - none -
fig|6666666.230108.peg.2850 CDS JH724260.1 4208630 4209085 2 + 456 hypothetical protein - none -
fig|6666666.230108.peg.2851 CDS JH724260.1 4209517 4209711 1 + 195 hypothetical protein - none -
fig|6666666.230108.peg.2852 CDS JH724260.1 4210012 4210383 1 + 372 hypothetical protein - none -
fig|6666666.230108.peg.2853 CDS JH724260.1 4212126 4210444 -3 - 1683 putative DNA primase - none -
fig|6666666.230108.peg.2854 CDS JH724260.1 4212614 4212132 -2 - 483 hypothetical protein - none -
fig|6666666.230108.peg.2855 CDS JH724260.1 4213002 4212826 -3 - 177 hypothetical protein - none -
fig|6666666.230108.peg.2856 CDS JH724260.1 4214571 4213015 -3 - 1557 putative hemagglutinin - none -
fig|6666666.230108.peg.2857 CDS JH724260.1 4216832 4214583 -2 - 2250 putative DNA primase - none -
fig|6666666.230108.peg.2858 CDS JH724260.1 4218644 4216854 -2 - 1791 FIG00896847: hypothetical protein - none -
fig|6666666.230108.peg.2859 CDS JH724260.1 4218865 4218659 -1 - 207 hypothetical protein - none -
fig|6666666.230108.peg.2860 CDS JH724260.1 4219794 4218964 -3 - 831 putative cell wall endopeptidase family protein - none -
fig|6666666.230108.peg.2861 CDS JH724260.1 4220466 4219822 -3 - 645 FIG00897171: hypothetical protein - none -
fig|6666666.230108.peg.2862 CDS JH724260.1 4221165 4220479 -3 - 687 FIG00899176: hypothetical protein - none -
fig|6666666.230108.peg.2863 CDS JH724260.1 4221873 4221178 -3 - 696 FIG00897775: hypothetical protein - none -
fig|6666666.230108.peg.2864 CDS JH724260.1 4222339 4221854 -1 - 486 FIG00408532: hypothetical protein - none -
fig|6666666.230108.peg.2865 CDS JH724260.1 4224043 4222352 -1 - 1692 FIG00899363: hypothetical protein - none -
fig|6666666.230108.peg.2866 CDS JH724260.1 4225616 4224048 -2 - 1569 FIG00402755: hypothetical protein - none -
fig|6666666.230108.peg.2867 CDS JH724260.1 4225866 4225642 -3 - 225 FIG00897411: hypothetical protein - none -
fig|6666666.230108.peg.2868 CDS JH724260.1 4226645 4225887 -2 - 759 FIG00899284: hypothetical protein - none -
fig|6666666.230108.peg.2869 CDS JH724260.1 4226868 4226719 -3 - 150 hypothetical protein - none -
fig|6666666.230108.peg.2870 CDS JH724260.1 4226867 4227526 2 + 660 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.230108.peg.2871 CDS JH724260.1 4228395 4227559 -3 - 837 FIG00898496: hypothetical protein - none -
fig|6666666.230108.peg.2872 CDS JH724260.1 4229393 4229959 2 + 567 putative ribose phosphate pyrophosphokinase - none -
fig|6666666.230108.peg.2873 CDS JH724260.1 4229961 4230464 3 + 504 UPF0398 protein ABC2016 - none -
fig|6666666.230108.peg.2874 CDS JH724260.1 4231291 4230806 -1 - 486 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.230108.peg.2875 CDS JH724260.1 4231629 4231471 -3 - 159 hypothetical protein - none -
fig|6666666.230108.peg.2876 CDS JH724260.1 4231640 4232254 2 + 615 hypothetical protein - none -
fig|6666666.230108.peg.2877 CDS JH724260.1 4232267 4232839 2 + 573 hypothetical protein - none -
fig|6666666.230108.peg.2878 CDS JH724260.1 4233621 4233136 -3 - 486 hypothetical protein - none -
fig|6666666.230108.peg.2879 CDS JH724260.1 4234217 4233627 -2 - 591 conserved hypothetical phage-like protein - none -
fig|6666666.230108.peg.2880 CDS JH724260.1 4234713 4239692 3 + 4980 putative DNA methylase - none -
fig|6666666.230108.peg.2881 CDS JH724260.1 4239722 4239847 2 + 126 hypothetical protein - none -
fig|6666666.230108.peg.2882 CDS JH724260.1 4241820 4239955 -3 - 1866 hypothetical protein - none -
fig|6666666.230108.peg.2883 CDS JH724260.1 4242393 4242004 -3 - 390 hypothetical protein - none -
fig|6666666.230108.peg.2884 CDS JH724260.1 4242822 4243577 3 + 756 hypothetical protein - none -
fig|6666666.230108.peg.2885 CDS JH724260.1 4243582 4244325 1 + 744 hypothetical protein - none -
fig|6666666.230108.peg.2886 CDS JH724260.1 4245888 4244404 -3 - 1485 hypothetical protein - none -
fig|6666666.230108.peg.2887 CDS JH724260.1 4246332 4246159 -3 - 174 hypothetical protein - none -
fig|6666666.230108.peg.2888 CDS JH724260.1 4247141 4246401 -2 - 741 ankyrin repeat protein, putative - none -
fig|6666666.230108.peg.2889 CDS JH724260.1 4251432 4247110 -3 - 4323 Rhs family protein - none -
fig|6666666.230108.peg.2890 CDS JH724260.1 4253080 4251704 -1 - 1377 hypothetical protein - none -
fig|6666666.230108.peg.2891 CDS JH724260.1 4254850 4253087 -1 - 1764 VgrG protein - none -
fig|6666666.230108.peg.2892 CDS JH724260.1 4255186 4254962 -1 - 225 hypothetical protein - none -
fig|6666666.230108.peg.2893 CDS JH724260.1 4256673 4255870 -3 - 804 hypothetical protein - none -
fig|6666666.230108.peg.2894 CDS JH724260.1 4259026 4256678 -1 - 2349 FIG00936918: hypothetical protein - none -
fig|6666666.230108.peg.2895 CDS JH724260.1 4259964 4259023 -3 - 942 FIG00937600: hypothetical protein - none -
fig|6666666.230108.peg.2896 CDS JH724260.1 4260421 4259975 -1 - 447 hypothetical protein - none -
fig|6666666.230108.peg.2897 CDS JH724260.1 4260915 4260418 -3 - 498 hypothetical protein - none -
fig|6666666.230108.peg.2898 CDS JH724260.1 4262084 4260936 -2 - 1149 FIG00937680: hypothetical protein - none -
fig|6666666.230108.peg.2899 CDS JH724260.1 4262966 4262088 -2 - 879 FIG00939378: hypothetical protein - none -
fig|6666666.230108.peg.2900 CDS JH724260.1 4263915 4262980 -3 - 936 FIG00937346: hypothetical protein - none -
fig|6666666.230108.peg.2901 CDS JH724260.1 4266338 4263900 -2 - 2439 ATP-dependent Clp protease ATP-binding subunit ClpA ClpAS cluster;
Proteolysis in bacteria, ATP-dependent;
Ribosome recycling related cluster
fig|6666666.230108.peg.2902 CDS JH724260.1 4268110 4266335 -1 - 1776 FIG00938542: hypothetical protein - none -
fig|6666666.230108.peg.2903 CDS JH724260.1 4268540 4268118 -2 - 423 hypothetical protein - none -
fig|6666666.230108.peg.2904 CDS JH724260.1 4268707 4269174 1 + 468 hypothetical protein - none -
fig|6666666.230108.peg.2905 CDS JH724260.1 4269187 4270566 1 + 1380 FIG01101450: hypothetical protein - none -
fig|6666666.230108.peg.2906 CDS JH724260.1 4270532 4270681 2 + 150 hypothetical protein - none -
fig|6666666.230108.peg.2907 CDS JH724260.1 4270948 4270835 -1 - 114 hypothetical protein - none -
fig|6666666.230108.peg.2908 CDS JH724260.1 4270967 4271686 2 + 720 hypothetical protein - none -
fig|6666666.230108.peg.2909 CDS JH724260.1 4272154 4272267 1 + 114 hypothetical protein - none -
fig|6666666.230108.peg.2910 CDS JH724260.1 4272601 4273341 1 + 741 Putative transcriptional regulator - none -
fig|6666666.230108.peg.2911 CDS JH724260.1 4273842 4273720 -3 - 123 hypothetical protein - none -
fig|6666666.230108.peg.2912 CDS JH724260.1 4274110 4274439 1 + 330 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.230108.peg.2913 CDS JH724260.1 4274686 4275441 1 + 756 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.230108.peg.2914 CDS JH724260.1 4275448 4275702 1 + 255 FIG00403362: hypothetical protein - none -
fig|6666666.230108.peg.2915 CDS JH724260.1 4277110 4275767 -1 - 1344 archaeal ATPase, fused to C-terminal DUF234 domain - none -
fig|6666666.230108.peg.2916 CDS JH724260.1 4277592 4277356 -3 - 237 FIG00407633: hypothetical protein - none -
fig|6666666.230108.peg.2917 CDS JH724260.1 4277634 4279379 3 + 1746 Chromosome (plasmid) partitioning protein ParB Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.230108.peg.2918 CDS JH724260.1 4279793 4279551 -2 - 243 FIG00407633: hypothetical protein - none -
fig|6666666.230108.peg.2919 CDS JH724260.1 4279923 4280147 3 + 225 FIG00405292: hypothetical protein - none -
fig|6666666.230108.peg.2920 CDS JH724260.1 4280163 4280435 3 + 273 FIG00402868: hypothetical protein - none -
fig|6666666.230108.peg.2921 CDS JH724260.1 4280469 4280843 3 + 375 FIG00408093: hypothetical protein - none -
fig|6666666.230108.peg.2922 CDS JH724260.1 4280827 4280955 1 + 129 hypothetical protein - none -
fig|6666666.230108.peg.2923 CDS JH724260.1 4283117 4280931 -2 - 2187 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.2924 CDS JH724260.1 4283858 4283121 -2 - 738 hypothetical protein - none -
fig|6666666.230108.peg.2925 CDS JH724260.1 4284528 4283872 -3 - 657 FIG00403811: hypothetical protein - none -
fig|6666666.230108.peg.2926 CDS JH724260.1 4284942 4284550 -3 - 393 FIG00407458: hypothetical protein - none -
fig|6666666.230108.peg.2927 CDS JH724260.1 4285925 4285059 -2 - 867 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.2928 CDS JH724260.1 4286301 4285957 -3 - 345 hypothetical protein - none -
fig|6666666.230108.peg.2929 CDS JH724260.1 4287456 4286314 -3 - 1143 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.2930 CDS JH724260.1 4287949 4287467 -1 - 483 DNA adenine methyltransferase, phage-associated Phage DNA synthesis
fig|6666666.230108.peg.2931 CDS JH724260.1 4288334 4287960 -2 - 375 FIG00403140: hypothetical protein - none -
fig|6666666.230108.peg.2932 CDS JH724260.1 4288961 4288347 -2 - 615 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.2933 CDS JH724260.1 4289357 4288968 -2 - 390 hypothetical protein - none -
fig|6666666.230108.peg.2934 CDS JH724260.1 4289809 4289387 -1 - 423 FIG01290742: hypothetical protein - none -
fig|6666666.230108.peg.2935 CDS JH724260.1 4290037 4291407 1 + 1371 integrase - none -
fig|6666666.230108.peg.2936 CDS JH724260.1 4291418 4292608 2 + 1191 hypothetical protein - none -
fig|6666666.230108.peg.2937 CDS JH724260.1 4292782 4293093 1 + 312 hypothetical protein - none -
fig|6666666.230108.peg.2938 CDS JH724260.1 4293127 4293846 1 + 720 hypothetical protein - none -
fig|6666666.230108.peg.2939 CDS JH724260.1 4294022 4294372 2 + 351 Mobile element protein - none -
fig|6666666.230108.peg.2940 CDS JH724260.1 4294369 4295421 1 + 1053 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.2941 CDS JH724260.1 4295418 4296206 3 + 789 hypothetical protein - none -
fig|6666666.230108.peg.2942 CDS JH724260.1 4296212 4297423 2 + 1212 Integrase - none -
fig|6666666.230108.peg.2943 CDS JH724260.1 4297653 4302635 3 + 4983 FIG003033: Helicase domain protein - none -
fig|6666666.230108.peg.2944 CDS JH724260.1 4304226 4302958 -3 - 1269 hypothetical protein - none -
fig|6666666.230108.peg.2945 CDS JH724260.1 4305878 4304223 -2 - 1656 ThiF family protein - none -
fig|6666666.230108.peg.2946 CDS JH724260.1 4306829 4305888 -2 - 942 hypothetical protein - none -
fig|6666666.230108.peg.2947 CDS JH724260.1 4307464 4306850 -1 - 615 hypothetical protein - none -
fig|6666666.230108.peg.2948 CDS JH724260.1 4308755 4307457 -2 - 1299 putative ATP-binding protein - none -
fig|6666666.230108.peg.2949 CDS JH724260.1 4309800 4309099 -3 - 702 FIG01290742: hypothetical protein - none -
fig|6666666.230108.peg.2950 CDS JH724260.1 4310474 4309815 -2 - 660 FIG00896865: hypothetical protein - none -
fig|6666666.230108.peg.2951 CDS JH724260.1 4311425 4310655 -2 - 771 Adenine-specific methyltransferase (EC 2.1.1.72) CBSS-257314.1.peg.752
fig|6666666.230108.peg.2952 CDS JH724260.1 4311446 4311586 2 + 141 hypothetical protein - none -
fig|6666666.230108.peg.2953 CDS JH724260.1 4312349 4311636 -2 - 714 FIG00897793: hypothetical protein - none -
fig|6666666.230108.peg.2954 CDS JH724260.1 4314889 4312358 -1 - 2532 FIG00898215: hypothetical protein - none -
fig|6666666.230108.peg.2955 CDS JH724260.1 4315532 4314894 -2 - 639 FIG00897908: hypothetical protein - none -
fig|6666666.230108.peg.2956 CDS JH724260.1 4318243 4315532 -1 - 2712 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.2957 CDS JH724260.1 4318647 4318354 -3 - 294 FIG00897980: hypothetical protein - none -
fig|6666666.230108.peg.2958 CDS JH724260.1 4318990 4318661 -1 - 330 Conjugative transposon protein TraE Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.2959 CDS JH724260.1 4319423 4319100 -2 - 324 FIG00898505: hypothetical protein - none -
fig|6666666.230108.peg.2960 CDS JH724260.1 4319877 4319425 -3 - 453 FIG00896660: hypothetical protein - none -
fig|6666666.230108.peg.2961 CDS JH724260.1 4320997 4320110 -1 - 888 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230108.peg.2962 CDS JH724260.1 4322210 4321104 -2 - 1107 FIG00403804: hypothetical protein - none -
fig|6666666.230108.peg.2963 CDS JH724260.1 4322586 4322188 -3 - 399 putative excisionase - none -
fig|6666666.230108.peg.2964 CDS JH724260.1 4323537 4322764 -3 - 774 hypothetical protein - none -
fig|6666666.230108.peg.2965 CDS JH724260.1 4326083 4324953 -2 - 1131 tyrosine type site-specific recombinase - none -
fig|6666666.230108.peg.2966 CDS JH724260.1 4326099 4325980 -3 - 120 hypothetical protein - none -
fig|6666666.230108.peg.2967 CDS JH724260.1 4326383 4326261 -2 - 123 hypothetical protein - none -
fig|6666666.230108.peg.2968 CDS JH724260.1 4326337 4327383 1 + 1047 FIG00403676: hypothetical protein - none -
fig|6666666.230108.peg.2969 CDS JH724260.1 4327421 4328560 2 + 1140 FIG00403315: hypothetical protein - none -
fig|6666666.230108.peg.2970 CDS JH724260.1 4328572 4329645 1 + 1074 FIG00404780: hypothetical protein - none -
fig|6666666.230108.peg.2971 CDS JH724260.1 4329705 4331447 3 + 1743 FIG00414938: hypothetical protein - none -
fig|6666666.230108.peg.2972 CDS JH724260.1 4331585 4331788 2 + 204 FIG00409255: hypothetical protein - none -
fig|6666666.230108.peg.2973 CDS JH724260.1 4331788 4332381 1 + 594 hypothetical protein - none -
fig|6666666.230108.peg.2974 CDS JH724260.1 4332385 4332957 1 + 573 ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17) - none -
fig|6666666.230108.peg.2975 CDS JH724260.1 4334173 4332989 -1 - 1185 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.230108.peg.2976 CDS JH724260.1 4336799 4334415 -2 - 2385 ABC-type multidrug transport system, permease component - none -
fig|6666666.230108.peg.2977 CDS JH724260.1 4337791 4336796 -1 - 996 FIG00896745: hypothetical protein - none -
fig|6666666.230108.peg.2978 CDS JH724260.1 4339231 4337804 -1 - 1428 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.230108.peg.2979 CDS JH724260.1 4339400 4340926 2 + 1527 Cobyric acid synthase (EC 6.3.5.10) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2980 CDS JH724260.1 4340919 4341953 3 + 1035 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2981 CDS JH724260.1 4341957 4342925 3 + 969 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2982 CDS JH724260.1 4343034 4344914 3 + 1881 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.2983 CDS JH724260.1 4344911 4346872 2 + 1962 FIG00412932: hypothetical protein - none -
fig|6666666.230108.peg.2984 CDS JH724260.1 4347392 4346853 -2 - 540 Alpha-ribazole-5@1-phosphate phosphatase (EC 3.1.3.73) CBSS-216591.1.peg.168;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Phosphoglycerate mutase protein family
fig|6666666.230108.peg.2985 CDS JH724260.1 4348125 4347409 -3 - 717 Cobalamin synthase (EC 2.7.8.26) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2986 CDS JH724260.1 4349191 4348154 -1 - 1038 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2987 CDS JH724260.1 4349743 4349222 -1 - 522 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.230108.peg.2988 CDS JH724260.1 4350293 4351039 2 + 747 Transcriptional regulator, GntR family - none -
fig|6666666.230108.peg.2989 CDS JH724260.1 4351051 4353519 1 + 2469 Predicted sialic acid transporter Sialic Acid Metabolism
fig|6666666.230108.peg.2990 CDS JH724260.1 4353662 4354474 2 + 813 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230108.peg.2991 CDS JH724260.1 4354809 4357820 3 + 3012 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.2992 CDS JH724260.1 4357930 4359345 1 + 1416 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.2993 CDS JH724260.1 4359359 4360990 2 + 1632 Sialidase (EC 3.2.1.18) Galactosylceramide and Sulfatide metabolism;
Sialic Acid Metabolism
fig|6666666.230108.peg.2994 CDS JH724260.1 4361020 4361688 1 + 669 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.230108.peg.2995 CDS JH724260.1 4361694 4362779 3 + 1086 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.2996 CDS JH724260.1 4362776 4363855 2 + 1080 putative secreted protein - none -
fig|6666666.230108.peg.2997 CDS JH724260.1 4363903 4364460 1 + 558 probable beta-D-galactosidase Galactosylceramide and Sulfatide metabolism
fig|6666666.230108.peg.2998 CDS JH724260.1 4364576 4366069 2 + 1494 Prolyl-tRNA synthetase (EC 6.1.1.15), archaeal/eukaryal type tRNA aminoacylation, Pro
fig|6666666.230108.peg.2999 CDS JH724260.1 4366498 4366238 -1 - 261 hypothetical protein - none -
fig|6666666.230108.peg.3000 CDS JH724260.1 4366797 4366564 -3 - 234 hypothetical protein - none -
fig|6666666.230108.peg.3001 CDS JH724260.1 4366974 4367156 3 + 183 hypothetical protein - none -
fig|6666666.230108.peg.3002 CDS JH724260.1 4367427 4367281 -3 - 147 hypothetical protein - none -
fig|6666666.230108.peg.3003 CDS JH724260.1 4367386 4368516 1 + 1131 FIG00898796: hypothetical protein - none -
fig|6666666.230108.peg.3004 CDS JH724260.1 4369178 4368669 -2 - 510 FIG00403032: hypothetical protein - none -
fig|6666666.230108.peg.3005 CDS JH724260.1 4369227 4369430 3 + 204 hypothetical protein - none -
fig|6666666.230108.peg.3006 CDS JH724260.1 4369453 4369713 1 + 261 FIG00407477: hypothetical protein - none -
fig|6666666.230108.peg.3007 CDS JH724260.1 4371972 4369843 -3 - 2130 putative helicase - none -
fig|6666666.230108.peg.3008 CDS JH724260.1 4372418 4372095 -2 - 324 hypothetical protein - none -
fig|6666666.230108.peg.3009 CDS JH724260.1 4373140 4373685 1 + 546 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230108.peg.3010 CDS JH724260.1 4373741 4374646 2 + 906 Lipopolysaccharide core biosynthesis protein RfaS LOS core oligosaccharide biosynthesis
fig|6666666.230108.peg.3011 CDS JH724260.1 4374658 4376058 1 + 1401 Polysaccharide biosynthesis protein - none -
fig|6666666.230108.peg.3012 CDS JH724260.1 4376060 4377241 2 + 1182 capsular polysaccharide biosynthesis protein Rhamnose containing glycans
fig|6666666.230108.peg.3013 CDS JH724260.1 4377257 4378321 2 + 1065 Glycosyl transferase, group 1 family protein - none -
fig|6666666.230108.peg.3014 CDS JH724260.1 4378334 4379341 2 + 1008 Beta-1,3-glucosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.230108.peg.3015 CDS JH724260.1 4379409 4380899 3 + 1491 hypothetical protein - none -
fig|6666666.230108.peg.3016 CDS JH724260.1 4380928 4381896 1 + 969 UDP-glucose 4-epimerase (EC 5.1.3.2) CBSS-296591.1.peg.2330;
Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.230108.peg.3017 CDS JH724260.1 4381964 4383229 2 + 1266 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.230108.peg.3018 CDS JH724260.1 4383183 4384361 3 + 1179 Lipid carrier : UDP-N-acetylgalactosaminyltransferase (EC 2.4.1.-) / Alpha-1,3-N-acetylgalactosamine transferase PglA (EC 2.4.1.-); Putative glycosyltransferase CBSS-296591.1.peg.2330;
CBSS-296591.1.peg.2330;
CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria;
N-linked Glycosylation in Bacteria
fig|6666666.230108.peg.3019 CDS JH724260.1 4384396 4384587 1 + 192 hypothetical protein - none -
fig|6666666.230108.peg.3020 CDS JH724260.1 4384584 4384904 3 + 321 hypothetical protein - none -
fig|6666666.230108.peg.3021 CDS JH724260.1 4384914 4385894 3 + 981 UDP-glucose 4-epimerase (EC 5.1.3.2) CBSS-296591.1.peg.2330;
Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.230108.peg.3022 CDS JH724260.1 4385946 4386893 3 + 948 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.230108.peg.3023 CDS JH724260.1 4388338 4386908 -1 - 1431 hypothetical protein - none -
fig|6666666.230108.peg.3024 CDS JH724260.1 4390657 4388534 -1 - 2124 Prolyl oligopeptidase family protein - none -
fig|6666666.230108.peg.3025 CDS JH724260.1 4392026 4390695 -2 - 1332 BexA, multidrug efflux pump - none -
fig|6666666.230108.peg.3026 CDS JH724260.1 4393982 4392129 -2 - 1854 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.230108.peg.3027 CDS JH724260.1 4395633 4394014 -3 - 1620 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster
fig|6666666.230108.peg.3028 CDS JH724260.1 4395943 4397343 1 + 1401 FIG00897178: hypothetical protein - none -
fig|6666666.230108.peg.3029 CDS JH724260.1 4397721 4397993 3 + 273 hypothetical protein - none -
fig|6666666.230108.peg.3030 CDS JH724260.1 4398031 4398933 1 + 903 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230108.peg.3031 CDS JH724260.1 4398994 4400331 1 + 1338 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230108.peg.3032 CDS JH724260.1 4400338 4401330 1 + 993 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230108.peg.3033 CDS JH724260.1 4401327 4401992 3 + 666 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230108.peg.3034 CDS JH724260.1 4402027 4402593 1 + 567 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230108.peg.3035 CDS JH724260.1 4402681 4403265 1 + 585 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.230108.peg.3036 CDS JH724260.1 4403352 4404431 3 + 1080 UDP-glucose 4-epimerase (EC 5.1.3.2) CBSS-296591.1.peg.2330;
Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.230108.peg.3037 CDS JH724260.1 4405042 4406577 1 + 1536 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.230108.peg.3038 CDS JH724260.1 4406594 4406845 2 + 252 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.230108.peg.3039 CDS JH724260.1 4406914 4407306 1 + 393 FIG048548: ATP synthase protein I2 - none -
fig|6666666.230108.peg.3040 CDS JH724260.1 4407290 4408360 2 + 1071 ATP synthase F0 sector subunit a - none -
fig|6666666.230108.peg.3041 CDS JH724260.1 4408417 4408674 1 + 258 ATP synthase F0 sector subunit c - none -
fig|6666666.230108.peg.3042 CDS JH724260.1 4408770 4409276 3 + 507 ATP synthase F0 sector subunit b - none -
fig|6666666.230108.peg.3043 CDS JH724260.1 4409309 4409848 2 + 540 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.230108.peg.3044 CDS JH724260.1 4409979 4411565 3 + 1587 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.230108.peg.3045 CDS JH724260.1 4411687 4412577 1 + 891 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.230108.peg.3046 CDS JH724260.1 4412745 4414961 3 + 2217 DNA repair and recombination protein, putative helicase - none -
fig|6666666.230108.peg.3047 CDS JH724260.1 4415895 4414996 -3 - 900 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230108.peg.3048 CDS JH724260.1 4416520 4415924 -1 - 597 FIG00404985: hypothetical protein - none -
fig|6666666.230108.peg.3049 CDS JH724260.1 4417427 4416621 -2 - 807 FIG00408616: hypothetical protein - none -
fig|6666666.230108.peg.3050 CDS JH724260.1 4418171 4417449 -2 - 723 Two-component system response regulator - none -
fig|6666666.230108.peg.3051 CDS JH724260.1 4419816 4418245 -3 - 1572 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.230108.peg.3052 CDS JH724260.1 4420018 4422171 1 + 2154 FIG00406183: hypothetical protein - none -
fig|6666666.230108.peg.3053 CDS JH724260.1 4422287 4423957 2 + 1671 Formate--tetrahydrofolate ligase (EC 6.3.4.3) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.230108.peg.3054 CDS JH724260.1 4425343 4424063 -1 - 1281 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.230108.peg.3055 CDS JH724260.1 4426195 4425446 -1 - 750 FIG00897396: hypothetical protein - none -
fig|6666666.230108.peg.3056 CDS JH724260.1 4426806 4426240 -3 - 567 Flavoredoxin - none -
fig|6666666.230108.peg.3057 CDS JH724260.1 4427267 4426803 -2 - 465 Aspartate carbamoyltransferase regulatory chain (PyrI) De Novo Pyrimidine Synthesis
fig|6666666.230108.peg.3058 CDS JH724260.1 4428241 4427294 -1 - 948 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.230108.peg.3059 CDS JH724260.1 4428702 4428586 -3 - 117 hypothetical protein - none -
fig|6666666.230108.peg.3060 CDS JH724260.1 4428852 4431182 3 + 2331 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.230108.peg.3061 CDS JH724260.1 4431301 4431618 1 + 318 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.230108.peg.3062 CDS JH724260.1 4431701 4432456 2 + 756 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) - none -
fig|6666666.230108.peg.3063 CDS JH724260.1 4432469 4433758 2 + 1290 ZINC PROTEASE (EC 3.4.99.-) - none -
fig|6666666.230108.peg.3064 CDS JH724260.1 4433833 4434996 1 + 1164 FIG01057005: hypothetical protein - none -
fig|6666666.230108.peg.3065 CDS JH724260.1 4436006 4435089 -2 - 918 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
De Novo Purine Biosynthesis;
Pentose phosphate pathway
fig|6666666.230108.peg.3066 CDS JH724260.1 4436152 4440498 1 + 4347 putative two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.3067 CDS JH724260.1 4440502 4441230 1 + 729 hypothetical protein - none -
fig|6666666.230108.peg.3068 CDS JH724260.1 4441238 4442674 2 + 1437 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.230108.peg.3069 CDS JH724260.1 4443353 4442649 -2 - 705 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.230108.peg.3070 CDS JH724260.1 4443896 4445062 2 + 1167 putative phage integrase - none -
fig|6666666.230108.peg.3071 CDS JH724260.1 4445477 4445178 -2 - 300 hypothetical protein - none -
fig|6666666.230108.peg.3072 CDS JH724260.1 4445620 4445474 -1 - 147 hypothetical protein - none -
fig|6666666.230108.peg.3073 CDS JH724260.1 4446074 4445712 -2 - 363 hypothetical protein - none -
fig|6666666.230108.peg.3074 CDS JH724260.1 4447941 4446370 -3 - 1572 Mobile element protein - none -
fig|6666666.230108.peg.3075 CDS JH724260.1 4448386 4448015 -1 - 372 Mobile element protein - none -
fig|6666666.230108.peg.3076 CDS JH724260.1 4448385 4448534 3 + 150 hypothetical protein - none -
fig|6666666.230108.peg.3077 CDS JH724260.1 4448964 4448830 -3 - 135 hypothetical protein - none -
fig|6666666.230108.peg.3078 CDS JH724260.1 4449475 4449221 -1 - 255 DNA-methyltransferase - none -
fig|6666666.230108.peg.3079 CDS JH724260.1 4452213 4451677 -3 - 537 DNA-methyltransferase - none -
fig|6666666.230108.peg.3080 CDS JH724260.1 4453630 4452218 -1 - 1413 hypothetical protein - none -
fig|6666666.230108.peg.3081 CDS JH724260.1 4454303 4453875 -2 - 429 hypothetical protein - none -
fig|6666666.230108.peg.3082 CDS JH724260.1 4454536 4454342 -1 - 195 hypothetical protein - none -
fig|6666666.230108.peg.3083 CDS JH724260.1 4456417 4454642 -1 - 1776 hypothetical protein - none -
fig|6666666.230108.peg.3084 CDS JH724260.1 4459995 4456414 -3 - 3582 Phage tail length tape-measure protein Phage tail proteins;
Phage tail proteins 2
fig|6666666.230108.peg.3085 CDS JH724260.1 4460497 4459982 -1 - 516 hypothetical protein - none -
fig|6666666.230108.peg.3086 CDS JH724260.1 4461113 4460589 -2 - 525 SECRETION ACTIVATOR PROTEIN - none -
fig|6666666.230108.peg.3087 CDS JH724260.1 4461763 4461155 -1 - 609 Site-specific recombinase, resolvase family - none -
fig|6666666.230108.peg.3088 CDS JH724260.1 4463706 4462492 -3 - 1215 transposase - none -
fig|6666666.230108.peg.3089 CDS JH724260.1 4464150 4463770 -3 - 381 hypothetical protein - none -
fig|6666666.230108.peg.3090 CDS JH724260.1 4464299 4464162 -2 - 138 hypothetical protein - none -
fig|6666666.230108.peg.3091 CDS JH724260.1 4465167 4464724 -3 - 444 hypothetical protein - none -
fig|6666666.230108.peg.3092 CDS JH724260.1 4468146 4465180 -3 - 2967 Phage-related protein - none -
fig|6666666.230108.peg.3093 CDS JH724260.1 4469382 4469089 -3 - 294 hypothetical protein - none -
fig|6666666.230108.peg.3094 CDS JH724260.1 4469738 4469890 2 + 153 hypothetical protein - none -
fig|6666666.230108.peg.3095 CDS JH724260.1 4469910 4470584 3 + 675 hypothetical protein - none -
fig|6666666.230108.peg.3096 CDS JH724260.1 4471072 4471485 1 + 414 hypothetical protein - none -
fig|6666666.230108.peg.3097 CDS JH724260.1 4471605 4472303 3 + 699 FIG00899114: hypothetical protein - none -
fig|6666666.230108.peg.3098 CDS JH724260.1 4472306 4472902 2 + 597 FIG00939210: hypothetical protein - none -
fig|6666666.230108.peg.3099 CDS JH724260.1 4472914 4474035 1 + 1122 FIG00898821: hypothetical protein - none -
fig|6666666.230108.peg.3100 CDS JH724260.1 4474047 4474397 3 + 351 hypothetical protein - none -
fig|6666666.230108.peg.3101 CDS JH724260.1 4475144 4475473 2 + 330 hypothetical protein - none -
fig|6666666.230108.peg.3102 CDS JH724260.1 4475461 4475763 1 + 303 hypothetical protein - none -
fig|6666666.230108.peg.3103 CDS JH724260.1 4475760 4476152 3 + 393 hypothetical protein - none -
fig|6666666.230108.peg.3104 CDS JH724260.1 4476154 4476696 1 + 543 hypothetical protein - none -
fig|6666666.230108.peg.3105 CDS JH724260.1 4476768 4477157 3 + 390 hypothetical protein - none -
fig|6666666.230108.peg.3106 CDS JH724260.1 4477190 4477351 2 + 162 hypothetical protein - none -
fig|6666666.230108.peg.3107 CDS JH724260.1 4477354 4479486 1 + 2133 FIG00897168: hypothetical protein - none -
fig|6666666.230108.peg.3108 CDS JH724260.1 101356 102321 1 + 966 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230108.peg.3109 CDS JH724260.1 102412 103167 1 + 756 Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family Potassium homeostasis
fig|6666666.230108.peg.3110 CDS JH724260.1 103271 104857 2 + 1587 Glutamate/gamma-aminobutyrate antiporter - none -
fig|6666666.230108.peg.3111 CDS JH724260.1 105687 104950 -3 - 738 Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.230108.peg.3112 CDS JH724260.1 106641 105979 -3 - 663 FIG00402915: hypothetical protein - none -
fig|6666666.230108.peg.3113 CDS JH724260.1 107247 106690 -3 - 558 FIG00405189: hypothetical protein - none -
fig|6666666.230108.peg.3114 CDS JH724260.1 108367 107267 -1 - 1101 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.3115 CDS JH724260.1 108905 108354 -2 - 552 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.3116 CDS JH724260.1 109717 109013 -1 - 705 FIG00414056: hypothetical protein - none -
fig|6666666.230108.peg.3117 CDS JH724260.1 110434 109724 -1 - 711 FIG00405854: hypothetical protein - none -
fig|6666666.230108.peg.3118 CDS JH724260.1 111513 110665 -3 - 849 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.230108.peg.3119 CDS JH724260.1 111904 111506 -1 - 399 FIG00404066: hypothetical protein - none -
fig|6666666.230108.peg.3120 CDS JH724260.1 111993 112466 3 + 474 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.230108.peg.3121 CDS JH724260.1 115382 112473 -2 - 2910 L-fucose kinase (EC 2.7.1.52) - none -
fig|6666666.230108.peg.3122 CDS JH724260.1 116162 115806 -2 - 357 Transcriptional regulator, MarR family - none -
fig|6666666.230108.peg.3123 CDS JH724260.1 118648 116174 -1 - 2475 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.230108.peg.3124 CDS JH724260.1 120123 118942 -3 - 1182 Clostripain-related protein - none -
fig|6666666.230108.peg.3125 CDS JH724260.1 120571 120173 -1 - 399 FIG00405061: hypothetical protein - none -
fig|6666666.230108.peg.3126 CDS JH724260.1 121554 120694 -3 - 861 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.230108.peg.3127 CDS JH724260.1 123276 121747 -3 - 1530 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.230108.peg.3128 CDS JH724260.1 124946 123624 -2 - 1323 Transglutaminase-like enzymes, putative cysteine proteases - none -
fig|6666666.230108.peg.3129 CDS JH724260.1 126127 124955 -1 - 1173 L-alanine-DL-glutamate epimerase Muconate lactonizing enzyme family;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230108.peg.3130 CDS JH724260.1 127500 126259 -3 - 1242 L-alanyl-gamma-D-glutamyl-L-diamino acid endopeptidase Muconate lactonizing enzyme family
fig|6666666.230108.peg.3131 CDS JH724260.1 128109 129428 3 + 1320 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.230108.peg.3132 CDS JH724260.1 130260 129658 -3 - 603 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.230108.peg.3133 CDS JH724260.1 131308 130613 -1 - 696 Phosphate transport system regulatory protein PhoU High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.230108.peg.3134 CDS JH724260.1 132145 131369 -1 - 777 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.230108.peg.3135 CDS JH724260.1 133002 132142 -3 - 861 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.230108.peg.3136 CDS JH724260.1 134199 133015 -3 - 1185 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism
fig|6666666.230108.peg.3137 CDS JH724260.1 134457 135275 3 + 819 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) High affinity phosphate transporter and control of PHO regulon;
PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.230108.peg.3138 CDS JH724260.1 135350 137089 2 + 1740 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.230108.peg.3139 CDS JH724260.1 137094 138506 3 + 1413 TPR-domain containing protein - none -
fig|6666666.230108.peg.3140 CDS JH724260.1 138601 139173 1 + 573 Alkaline phosphatase like protein Phosphate metabolism
fig|6666666.230108.peg.3141 CDS JH724260.1 139764 139264 -3 - 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) CBSS-257314.1.peg.752;
Thioredoxin-disulfide reductase
fig|6666666.230108.peg.3142 CDS JH724260.1 139891 140490 1 + 600 FIG00407667: hypothetical protein - none -
fig|6666666.230108.peg.3143 CDS JH724260.1 141147 140554 -3 - 594 Site-specific recombinase Mpi - none -
fig|6666666.230108.peg.3144 CDS JH724260.1 142584 141376 -3 - 1209 Lipopolysaccharide biosynthesis protein RffA - none -
fig|6666666.230108.peg.3145 CDS JH724260.1 142694 142581 -2 - 114 hypothetical protein - none -
fig|6666666.230108.peg.3146 CDS JH724260.1 143366 142704 -2 - 663 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.230108.peg.3147 CDS JH724260.1 145789 143336 -1 - 2454 Acyl protein synthase/acyl-CoA reductase RfbN - none -
fig|6666666.230108.peg.3148 CDS JH724260.1 147240 145807 -3 - 1434 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.230108.peg.3149 CDS JH724260.1 147476 147246 -2 - 231 hypothetical protein - none -
fig|6666666.230108.peg.3150 CDS JH724260.1 148442 147480 -2 - 963 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.230108.peg.3151 CDS JH724260.1 149211 148432 -3 - 780 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.230108.peg.3152 CDS JH724260.1 149936 149253 -2 - 684 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.230108.peg.3153 CDS JH724260.1 150649 149990 -1 - 660 Acetyltransferase (isoleucine patch superfamily) - none -
fig|6666666.230108.peg.3154 CDS JH724260.1 151332 150724 -3 - 609 Lipid carrier : UDP-N-acetylgalactosaminyltransferase (EC 2.4.1.-) CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria
fig|6666666.230108.peg.3155 CDS JH724260.1 152501 151338 -2 - 1164 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230108.peg.3156 CDS JH724260.1 153244 152498 -1 - 747 Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase (EC 2.4.1.-) Rhamnose containing glycans
fig|6666666.230108.peg.3157 CDS JH724260.1 153499 153681 1 + 183 hypothetical protein - none -
fig|6666666.230108.peg.3158 CDS JH724260.1 155125 153974 -1 - 1152 hypothetical protein - none -
fig|6666666.230108.peg.3159 CDS JH724260.1 155999 155136 -2 - 864 glycosyl transferase, group 2 family protein - none -
fig|6666666.230108.peg.3160 CDS JH724260.1 157164 156130 -3 - 1035 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230108.peg.3161 CDS JH724260.1 157276 157154 -1 - 123 hypothetical protein - none -
fig|6666666.230108.peg.3162 CDS JH724260.1 158622 157381 -3 - 1242 FIG01031831: hypothetical protein - none -
fig|6666666.230108.peg.3163 CDS JH724260.1 160035 159088 -3 - 948 putative glucosyl transferase - none -
fig|6666666.230108.peg.3164 CDS JH724260.1 161379 160066 -3 - 1314 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.230108.peg.3165 CDS JH724260.1 162987 161446 -3 - 1542 FIG01281286: hypothetical protein - none -
fig|6666666.230108.peg.3166 CDS JH724260.1 163579 163088 -1 - 492 UpdZ protein - none -
fig|6666666.230108.peg.3167 CDS JH724260.1 164159 163626 -2 - 534 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230108.peg.3168 CDS JH724260.1 165211 165032 -1 - 180 hypothetical protein - none -
fig|6666666.230108.peg.3169 CDS JH724260.1 165559 166023 1 + 465 FIG00896819: hypothetical protein - none -
fig|6666666.230108.peg.3170 CDS JH724260.1 166156 166821 1 + 666 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism
fig|6666666.230108.peg.3171 CDS JH724260.1 166840 167817 1 + 978 putative dihydropyrimidine dehydrogenase [NADP+] precursor - none -
fig|6666666.230108.peg.3172 CDS JH724260.1 169678 167912 -1 - 1767 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) CBSS-296591.1.peg.2330;
N-linked Glycosylation in Bacteria
fig|6666666.230108.peg.3173 CDS JH724260.1 171326 170001 -2 - 1326 Predicted ATPase related to phosphate starvation-inducible protein PhoH Phosphate metabolism
fig|6666666.230108.peg.3174 CDS JH724260.1 171540 172748 3 + 1209 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Colicin V and Bacteriocin Production Cluster;
Colicin V and Bacteriocin Production Cluster;
Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.230108.peg.3175 CDS JH724260.1 173099 172716 -2 - 384 Bona fide RidA/YjgF/TdcF/RutC subgroup - none -
fig|6666666.230108.peg.3176 CDS JH724260.1 175019 173316 -2 - 1704 Tetratricopeptide repeat family protein - none -
fig|6666666.230108.peg.3177 CDS JH724260.1 175763 175023 -2 - 741 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.230108.peg.3178 CDS JH724260.1 177462 175792 -3 - 1671 DNA repair protein RecN DNA repair, bacterial
fig|6666666.230108.peg.3179 CDS JH724260.1 178718 177489 -2 - 1230 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.230108.peg.3180 CDS JH724260.1 179483 178719 -2 - 765 DNA Pol III Epsilon Chain - none -
fig|6666666.230108.peg.3181 CDS JH724260.1 180713 179628 -2 - 1086 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.230108.peg.3182 CDS JH724260.1 180940 181308 1 + 369 FIG00937408: hypothetical protein - none -
fig|6666666.230108.peg.3183 CDS JH724260.1 183110 181476 -2 - 1635 FIG00402966: hypothetical protein - none -
fig|6666666.230108.peg.3184 CDS JH724260.1 183950 183183 -2 - 768 Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein Beta-lactamase
fig|6666666.230108.peg.3185 CDS JH724260.1 185007 184021 -3 - 987 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.230108.peg.3186 CDS JH724260.1 185873 185025 -2 - 849 FIG00404031: hypothetical protein - none -
fig|6666666.230108.peg.3187 CDS JH724260.1 185785 185910 1 + 126 hypothetical protein - none -
fig|6666666.230108.peg.3188 CDS JH724260.1 186850 185894 -1 - 957 L-threonine 3-dehydrogenase (EC 1.1.1.103) Glycine Biosynthesis;
Threonine degradation
fig|6666666.230108.peg.3189 CDS JH724260.1 187004 188191 2 + 1188 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) Glycine Biosynthesis;
Glycine and Serine Utilization
fig|6666666.230108.peg.3190 CDS JH724260.1 188815 188333 -1 - 483 Ferritin-like protein 2 Iron-sulfur cluster assembly
fig|6666666.230108.peg.3191 CDS JH724260.1 190118 188958 -2 - 1161 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230108.peg.3192 CDS JH724260.1 191591 190272 -2 - 1320 Aspartokinase (EC 2.7.2.4) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.230108.peg.3193 CDS JH724260.1 192422 191715 -2 - 708 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.230108.peg.3194 CDS JH724260.1 193051 192446 -1 - 606 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.230108.peg.3195 CDS JH724260.1 193928 193173 -2 - 756 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.230108.peg.3196 CDS JH724260.1 194693 193971 -2 - 723 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis
fig|6666666.230108.peg.3197 CDS JH724260.1 195304 194714 -1 - 591 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.230108.peg.3198 CDS JH724260.1 196251 195394 -3 - 858 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.230108.peg.3199 CDS JH724260.1 197774 197352 -2 - 423 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.230108.peg.3200 CDS JH724260.1 198417 197839 -3 - 579 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230108.peg.3201 CDS JH724260.1 199244 198462 -2 - 783 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.230108.peg.3202 CDS JH724260.1 200188 199289 -1 - 900 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.3203 CDS JH724260.1 201655 200345 -1 - 1311 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.230108.peg.3204 CDS JH724260.1 202626 201652 -3 - 975 MoxR-like ATPases - none -
fig|6666666.230108.peg.3205 CDS JH724260.1 203861 202638 -2 - 1224 FIG00652157: hypothetical protein - none -
fig|6666666.230108.peg.3206 CDS JH724260.1 204472 203858 -1 - 615 FIG00404596: hypothetical protein - none -
fig|6666666.230108.peg.3207 CDS JH724260.1 205426 204482 -1 - 945 FIG00403491: hypothetical protein - none -
fig|6666666.230108.peg.3208 CDS JH724260.1 206369 205407 -2 - 963 FIG00649403: hypothetical protein - none -
fig|6666666.230108.peg.3209 CDS JH724260.1 206470 207195 1 + 726 FIG00652438: hypothetical protein - none -
fig|6666666.230108.peg.3210 CDS JH724260.1 207321 207896 3 + 576 FIG00417994: hypothetical protein - none -
fig|6666666.230108.peg.3211 CDS JH724260.1 208909 208076 -1 - 834 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.230108.peg.3212 CDS JH724260.1 210043 208985 -1 - 1059 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.230108.peg.3213 CDS JH724260.1 210263 211063 2 + 801 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.230108.peg.3214 CDS JH724260.1 212748 211099 -3 - 1650 Hydroxylamine reductase (EC 1.7.-.-) Nitrosative stress
fig|6666666.230108.peg.3215 CDS JH724260.1 212931 213569 3 + 639 Hcp transcriptional regulator HcpR (Crp/Fnr family) Nitrosative stress
fig|6666666.230108.peg.3216 CDS JH724260.1 213622 214311 1 + 690 Hcp transcriptional regulator HcpR (Crp/Fnr family) Nitrosative stress
fig|6666666.230108.peg.3217 CDS JH724260.1 215593 214313 -1 - 1281 FIG00897187: hypothetical protein - none -
fig|6666666.230108.peg.3218 CDS JH724260.1 216392 215601 -2 - 792 Cytochrome c biogenesis protein CcsA - none -
fig|6666666.230108.peg.3219 CDS JH724260.1 217633 216389 -1 - 1245 FIG00896358: hypothetical protein - none -
fig|6666666.230108.peg.3220 CDS JH724260.1 219244 217763 -1 - 1482 Cytochrome c552 precursor (EC 1.7.2.2) Nitrate and nitrite ammonification;
Soluble cytochromes and functionally related electron carriers
fig|6666666.230108.peg.3221 CDS JH724260.1 220027 219437 -1 - 591 Cytochrome c nitrite reductase, small subunit NrfH Nitrate and nitrite ammonification
fig|6666666.230108.peg.3222 CDS JH724260.1 221405 220224 -2 - 1182 conserved hypothetical protein, putative iron uptake factor - none -
fig|6666666.230108.peg.3223 CDS JH724260.1 222844 221441 -1 - 1404 FIG00897421: hypothetical protein - none -
fig|6666666.230108.peg.3224 CDS JH724260.1 225194 222888 -2 - 2307 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.230108.peg.3225 CDS JH724260.1 225213 225362 3 + 150 hypothetical protein - none -
fig|6666666.230108.peg.3226 CDS JH724260.1 225340 225459 1 + 120 hypothetical protein - none -
fig|6666666.230108.peg.3227 CDS JH724260.1 225559 226839 1 + 1281 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.230108.peg.3228 CDS JH724260.1 227650 227195 -1 - 456 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.230108.peg.3229 CDS JH724260.1 228395 227682 -2 - 714 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230108.peg.3230 CDS JH724260.1 229132 228452 -1 - 681 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.230108.peg.3231 CDS JH724260.1 229755 232988 3 + 3234 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.3232 CDS JH724260.1 233004 234794 3 + 1791 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.3233 CDS JH724260.1 234822 235757 3 + 936 FIG00414000: hypothetical protein - none -
fig|6666666.230108.peg.3234 CDS JH724260.1 235770 236897 3 + 1128 Chitinase (EC 3.2.1.14) - none -
fig|6666666.230108.peg.3235 CDS JH724260.1 237074 238354 2 + 1281 FIG00404901: hypothetical protein - none -
fig|6666666.230108.peg.3236 CDS JH724260.1 239760 238435 -3 - 1326 putative outer membrane protein precursor - none -
fig|6666666.230108.peg.3237 CDS JH724260.1 239995 240996 1 + 1002 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.230108.peg.3238 CDS JH724260.1 241096 241800 1 + 705 Pirin - none -
fig|6666666.230108.peg.3239 CDS JH724260.1 241883 242617 2 + 735 Metal dependent hydrolase (EC 3.-.-.-) - none -
fig|6666666.230108.peg.3240 CDS JH724260.1 242657 243802 2 + 1146 FIG00407312: hypothetical protein - none -
fig|6666666.230108.peg.3241 CDS JH724260.1 243852 244229 3 + 378 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.230108.peg.3242 CDS JH724260.1 244259 244444 2 + 186 FIG00404257: hypothetical protein - none -
fig|6666666.230108.peg.3243 CDS JH724260.1 244441 245178 1 + 738 putative methyltransferase - none -
fig|6666666.230108.peg.3244 CDS JH724260.1 245798 245253 -2 - 546 AhpC/TSA family protein - none -
fig|6666666.230108.peg.3245 CDS JH724260.1 248808 246274 -3 - 2535 Ferrous iron transport protein B - none -
fig|6666666.230108.peg.3246 CDS JH724260.1 249092 250360 2 + 1269 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.230108.peg.3247 CDS JH724260.1 251212 250364 -1 - 849 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.230108.peg.3248 CDS JH724260.1 251490 253529 3 + 2040 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.230108.peg.3249 CDS JH724260.1 253663 255129 1 + 1467 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.230108.peg.3250 CDS JH724260.1 255368 256645 2 + 1278 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.230108.peg.3251 CDS JH724260.1 256657 257538 1 + 882 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.230108.peg.3252 CDS JH724260.1 257546 258691 2 + 1146 Capsule biosynthesis protein capA - none -
fig|6666666.230108.peg.3253 CDS JH724260.1 259316 261010 2 + 1695 Fe-S oxidoreductase - none -
fig|6666666.230108.peg.3254 CDS JH724260.1 262574 261072 -2 - 1503 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.230108.peg.3255 CDS JH724260.1 263717 262716 -2 - 1002 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) - none -
fig|6666666.230108.peg.3256 CDS JH724260.1 264087 265937 3 + 1851 FIG00412263: hypothetical protein - none -
fig|6666666.230108.peg.3257 CDS JH724260.1 266608 265976 -1 - 633 two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.3258 CDS JH724260.1 267525 266650 -3 - 876 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.3259 CDS JH724260.1 268386 270614 3 + 2229 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.230108.peg.3260 CDS JH724260.1 270616 271341 1 + 726 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.230108.peg.3261 CDS JH724260.1 273614 271410 -2 - 2205 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.3262 CDS JH724260.1 276107 273645 -2 - 2463 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.3263 CDS JH724260.1 277612 276284 -1 - 1329 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.3264 CDS JH724260.1 278161 277613 -1 - 549 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.3265 CDS JH724260.1 4480722 4484780 3 + 4059 FIG00897168: hypothetical protein - none -
fig|6666666.230108.peg.3266 CDS JH724260.1 4484840 4485208 2 + 369 hypothetical protein - none -
fig|6666666.230108.peg.3267 CDS JH724260.1 4485292 4490121 1 + 4830 Fibronectin type III domain protein - none -
fig|6666666.230108.peg.3268 CDS JH724260.1 4490141 4490425 2 + 285 hypothetical protein - none -
fig|6666666.230108.peg.3269 CDS JH724260.1 4490442 4492241 3 + 1800 Phage tail fiber protein Phage tail fiber proteins
fig|6666666.230108.peg.3270 CDS JH724260.1 4492247 4493284 2 + 1038 hypothetical protein - none -
fig|6666666.230108.peg.3271 CDS JH724260.1 4493290 4493874 1 + 585 hypothetical protein - none -
fig|6666666.230108.peg.3272 CDS JH724260.1 4493934 4494374 3 + 441 hypothetical protein - none -
fig|6666666.230108.peg.3273 CDS JH724260.1 4494385 4494726 1 + 342 hypothetical protein - none -
fig|6666666.230108.peg.3274 CDS JH724260.1 4494749 4495273 2 + 525 SECRETION ACTIVATOR PROTEIN - none -
fig|6666666.230108.peg.3275 CDS JH724260.1 4495270 4495731 1 + 462 hypothetical protein - none -
fig|6666666.230108.peg.3276 CDS JH724260.1 4497071 4496013 -2 - 1059 hypothetical protein - none -
fig|6666666.230108.peg.3277 CDS JH724260.1 4498125 4498292 3 + 168 hypothetical protein - none -
fig|6666666.230108.peg.3278 CDS JH724260.1 4498506 4498787 3 + 282 hypothetical protein - none -
fig|6666666.230108.peg.3279 CDS JH724260.1 4500271 4498880 -1 - 1392 Integrase IntN1 - none -
fig|6666666.230108.peg.3280 CDS JH724260.1 4501743 4500781 -3 - 963 Esterase - none -
fig|6666666.230108.peg.3281 CDS JH724260.1 4502255 4502055 -2 - 201 FIG00413734: hypothetical protein - none -
fig|6666666.230108.peg.3282 CDS JH724260.1 4502498 4503211 2 + 714 FIG00414131: hypothetical protein - none -
fig|6666666.230108.peg.3283 CDS JH724260.1 4505291 4503282 -2 - 2010 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Trehalose Biosynthesis
fig|6666666.230108.peg.3284 CDS JH724260.1 4505769 4505323 -3 - 447 probable beta-D-galactosidase Galactosylceramide and Sulfatide metabolism
fig|6666666.230108.peg.3285 CDS JH724260.1 4506469 4505804 -1 - 666 FIG00403581: hypothetical protein - none -
fig|6666666.230108.peg.3286 CDS JH724260.1 4506803 4507033 2 + 231 FIG00412253: hypothetical protein - none -
fig|6666666.230108.peg.3287 CDS JH724260.1 4508880 4507138 -3 - 1743 Alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization;
Trehalose Biosynthesis
fig|6666666.230108.peg.3288 CDS JH724260.1 4509677 4508868 -2 - 810 UPF0028 protein YchK Broadly distributed proteins not in subsystems
fig|6666666.230108.peg.3289 CDS JH724260.1 4510472 4509963 -2 - 510 hypothetical protein - none -
fig|6666666.230108.peg.3290 CDS JH724260.1 4511658 4510537 -3 - 1122 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.230108.peg.3291 CDS JH724260.1 4511828 4512475 2 + 648 hypothetical protein - none -
fig|6666666.230108.peg.3292 CDS JH724260.1 4513411 4512584 -1 - 828 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.230108.peg.3293 CDS JH724260.1 4514033 4513440 -2 - 594 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.230108.peg.3294 CDS JH724260.1 4514747 4514052 -2 - 696 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.230108.peg.3295 CDS JH724260.1 4515916 4514783 -1 - 1134 2-iminoacetate synthase (ThiH) (EC 4.1.99.19) - none -
fig|6666666.230108.peg.3296 CDS JH724260.1 4517619 4515937 -3 - 1683 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) - none -
fig|6666666.230108.peg.3297 CDS JH724260.1 4518421 4517633 -1 - 789 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.230108.peg.3298 CDS JH724260.1 4519092 4518433 -3 - 660 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.230108.peg.3299 CDS JH724260.1 4519286 4519089 -2 - 198 Sulfur carrier protein ThiS Thiamin biosynthesis
fig|6666666.230108.peg.3300 CDS JH724260.1 4520063 4519521 -2 - 543 FIG00403486: hypothetical protein - none -
fig|6666666.230108.peg.3301 CDS JH724260.1 4521058 4520171 -1 - 888 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.230108.peg.3302 CDS JH724260.1 4521135 4521269 3 + 135 hypothetical protein - none -
fig|6666666.230108.peg.3303 CDS JH724260.1 4521456 4522187 3 + 732 Hypothetical Nudix-like regulator - none -
fig|6666666.230108.peg.3304 CDS JH724260.1 4522235 4523713 2 + 1479 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.230108.peg.3305 CDS JH724260.1 4523819 4525135 2 + 1317 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.230108.peg.3306 CDS JH724260.1 4525250 4526737 2 + 1488 D-xylose proton-symporter XylE Xylose utilization
fig|6666666.230108.peg.3307 CDS JH724260.1 4526930 4528462 2 + 1533 Aliphatic amidase AmiE (EC 3.5.1.4) - none -
fig|6666666.230108.peg.3308 CDS JH724260.1 4528632 4528504 -3 - 129 hypothetical protein - none -
fig|6666666.230108.peg.3309 CDS JH724260.1 4528680 4529486 3 + 807 hypothetical protein - none -
fig|6666666.230108.peg.3310 CDS JH724260.1 4530633 4529761 -3 - 873 DNA modification methyltransferase (EC 2.1.1.-) - none -
fig|6666666.230108.peg.3311 CDS JH724260.1 4531151 4530630 -2 - 522 hypothetical protein - none -
fig|6666666.230108.peg.3312 CDS JH724260.1 4532020 4531160 -1 - 861 Type II restriction enzyme DpnII (EC 3.1.21.4) (Endonuclease DpnII) (R.DpnII) - none -
fig|6666666.230108.peg.3313 CDS JH724260.1 4532941 4532027 -1 - 915 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.230108.peg.3314 CDS JH724260.1 4533261 4536749 3 + 3489 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.230108.peg.3315 CDS JH724260.1 4536783 4537163 3 + 381 DnaK suppressor protein, putative - none -
fig|6666666.230108.peg.3316 CDS JH724260.1 4537166 4537798 2 + 633 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.230108.peg.3317 CDS JH724260.1 4537795 4538721 1 + 927 FIG00405766: hypothetical protein - none -
fig|6666666.230108.peg.3318 CDS JH724260.1 4539762 4539001 -3 - 762 tRNA (guanosine(18)-2@1-O)-methyltransferase (EC 2.1.1.34) RNA methylation;
tRNA modification Bacteria
fig|6666666.230108.peg.3319 CDS JH724260.1 4539906 4542215 3 + 2310 FIG00898528: hypothetical protein - none -
fig|6666666.230108.peg.3320 CDS JH724260.1 4542852 4542292 -3 - 561 FIG00406097: hypothetical protein - none -
fig|6666666.230108.peg.3321 CDS JH724260.1 4543422 4542985 -3 - 438 DoxX family protein - none -
fig|6666666.230108.peg.3322 CDS JH724260.1 4544765 4543479 -2 - 1287 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.230108.peg.3323 CDS JH724260.1 4545013 4546167 1 + 1155 Outer membrane protein/protective antigen OMA87 - none -
fig|6666666.230108.peg.3324 CDS JH724260.1 4546154 4547854 2 + 1701 Integral membrane protein - none -
fig|6666666.230108.peg.3325 CDS JH724260.1 4548196 4547879 -1 - 318 FIG00407892: hypothetical protein - none -
fig|6666666.230108.peg.3326 CDS JH724260.1 4548957 4548202 -3 - 756 Ferredoxin-type protein NapG (periplasmic nitrate reductase) Nitrate and nitrite ammonification
fig|6666666.230108.peg.3327 CDS JH724260.1 4549753 4549040 -1 - 714 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) / Trehalose-6-phosphate phosphatase (EC 3.1.3.12) Trehalose Biosynthesis;
Trehalose Biosynthesis
fig|6666666.230108.peg.3328 CDS JH724260.1 4550645 4550088 -2 - 558 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.230108.peg.3329 CDS JH724260.1 4550754 4550638 -3 - 117 hypothetical protein - none -
fig|6666666.230108.peg.3330 CDS JH724260.1 4551939 4551136 -3 - 804 metallo-beta-lactamase family protein - none -
fig|6666666.230108.peg.3331 CDS JH724260.1 4553401 4552022 -1 - 1380 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.230108.peg.3332 CDS JH724260.1 4553624 4554313 2 + 690 Hydrolase, haloacid delahogenase-like family - none -
fig|6666666.230108.peg.3333 CDS JH724260.1 4555750 4554356 -1 - 1395 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230108.peg.3334 CDS JH724260.1 4555996 4557057 1 + 1062 hypothetical protein - none -
fig|6666666.230108.peg.3335 CDS JH724260.1 4557097 4558545 1 + 1449 Altronate oxidoreductase (EC 1.1.1.58) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230108.peg.3336 CDS JH724260.1 4559187 4558654 -3 - 534 FHA domain protein - none -
fig|6666666.230108.peg.3337 CDS JH724260.1 4560392 4559238 -2 - 1155 FIG00403302: hypothetical protein - none -
fig|6666666.230108.peg.3338 CDS JH724260.1 4560626 4562044 2 + 1419 FIG00403031: hypothetical protein - none -
fig|6666666.230108.peg.3339 CDS JH724260.1 4562049 4562597 3 + 549 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Capsular heptose biosynthesis;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230108.peg.3340 CDS JH724260.1 4562601 4563914 3 + 1314 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.230108.peg.3341 CDS JH724260.1 4563952 4564752 1 + 801 FIG00406495: hypothetical protein - none -
fig|6666666.230108.peg.3342 CDS JH724260.1 4566075 4564789 -3 - 1287 ATP-dependent RNA helicase - none -
fig|6666666.230108.peg.3343 CDS JH724260.1 4567433 4566204 -2 - 1230 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.230108.peg.3344 CDS JH724260.1 4567710 4568210 3 + 501 FIG00402940: hypothetical protein - none -
fig|6666666.230108.peg.3345 CDS JH724260.1 4569620 4568484 -2 - 1137 membrane protein, putative - none -
fig|6666666.230108.peg.3346 CDS JH724260.1 4570747 4569617 -1 - 1131 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.230108.peg.3347 CDS JH724260.1 4573224 4570744 -3 - 2481 ATP-dependent protease La (EC 3.4.21.53) Type I Proteolysis in bacteria, ATP-dependent
fig|6666666.230108.peg.3348 CDS JH724260.1 4573396 4574103 1 + 708 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.230108.peg.3349 CDS JH724260.1 4575291 4574326 -3 - 966 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.3350 CDS JH724260.1 4576661 4575288 -2 - 1374 Two-component system response regulator - none -
fig|6666666.230108.peg.3351 CDS JH724260.1 4576677 4576847 3 + 171 hypothetical protein - none -
fig|6666666.230108.peg.3352 CDS JH724260.1 4576880 4578367 2 + 1488 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.230108.peg.3353 CDS JH724260.1 4578537 4579787 3 + 1251 ABC transporter permease - none -
fig|6666666.230108.peg.3354 CDS JH724260.1 4579799 4582204 2 + 2406 Probable ABC transporter permease - none -
fig|6666666.230108.peg.3355 CDS JH724260.1 4582216 4584591 1 + 2376 probable ABC transporter permease - none -
fig|6666666.230108.peg.3356 CDS JH724260.1 4584610 4586589 1 + 1980 ABC transporter, permease protein - none -
fig|6666666.230108.peg.3357 CDS JH724260.1 4586626 4587009 1 + 384 ABC transporter, permease protein - none -
fig|6666666.230108.peg.3358 CDS JH724260.1 4587141 4589390 3 + 2250 putative ABC transporter permease - none -
fig|6666666.230108.peg.3359 CDS JH724260.1 4589428 4590102 1 + 675 ABC transporter ATP-binding protein YvcR - none -
fig|6666666.230108.peg.3360 CDS JH724260.1 4590226 4590104 -1 - 123 hypothetical protein - none -
fig|6666666.230108.peg.3361 CDS JH724260.1 4590262 4590549 1 + 288 putative ryanodine receptor - none -
fig|6666666.230108.peg.3362 CDS JH724260.1 4590814 4591002 1 + 189 hypothetical protein - none -
fig|6666666.230108.peg.3363 CDS JH724260.1 4592427 4593626 3 + 1200 hypothetical protein - none -
fig|6666666.230108.peg.3364 CDS JH724260.1 4593687 4594337 3 + 651 hypothetical protein - none -
fig|6666666.230108.peg.3365 CDS JH724260.1 4594358 4598710 2 + 4353 hypothetical protein - none -
fig|6666666.230108.peg.3366 CDS JH724260.1 4599374 4598688 -2 - 687 FIG00405116: hypothetical protein - none -
fig|6666666.230108.peg.3367 CDS JH724260.1 4600524 4599718 -3 - 807 putative lipoprotein - none -
fig|6666666.230108.peg.3368 CDS JH724260.1 4601811 4600624 -3 - 1188 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.230108.peg.3369 CDS JH724260.1 4601810 4602022 2 + 213 hypothetical protein - none -
fig|6666666.230108.peg.3370 CDS JH724260.1 4602019 4603062 1 + 1044 Transcription regulator [contains diacylglycerol kinase catalytic domain] - none -
fig|6666666.230108.peg.3371 CDS JH724260.1 4603194 4604951 3 + 1758 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.230108.peg.3372 CDS JH724260.1 4604973 4605353 3 + 381 FIG00406468: hypothetical protein - none -
fig|6666666.230108.peg.3373 CDS JH724260.1 4606267 4605380 -1 - 888 N-carbamoylputrescine amidase (3.5.1.53) Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.230108.peg.3374 CDS JH724260.1 4607423 4606308 -2 - 1116 Agmatine deiminase (EC 3.5.3.12) Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.230108.peg.3375 CDS JH724260.1 4608098 4607562 -2 - 537 Ferredoxin domain containing protein - none -
fig|6666666.230108.peg.3376 CDS JH724260.1 4608191 4608814 2 + 624 YbbL ABC transporter ATP-binding protein Broadly distributed proteins not in subsystems
fig|6666666.230108.peg.3377 CDS JH724260.1 4608826 4609635 1 + 810 YbbM seven transmembrane helix protein Broadly distributed proteins not in subsystems
fig|6666666.230108.peg.3378 CDS JH724260.1 4610048 4609638 -2 - 411 FIG00402962: hypothetical protein - none -
fig|6666666.230108.peg.3379 CDS JH724260.1 4610849 4610073 -2 - 777 FIG00412714: hypothetical protein - none -
fig|6666666.230108.peg.3380 CDS JH724260.1 4611038 4612132 2 + 1095 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.230108.peg.3381 CDS JH724260.1 4612138 4612977 1 + 840 FIG137478: Hypothetical protein tRNA modification Bacteria
fig|6666666.230108.peg.3382 CDS JH724260.1 4613123 4614277 2 + 1155 FIG00406678: hypothetical protein - none -
fig|6666666.230108.peg.3383 CDS JH724260.1 4614291 4615085 3 + 795 FIG00414651: hypothetical protein - none -
fig|6666666.230108.peg.3384 CDS JH724260.1 4615236 4616612 3 + 1377 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.230108.peg.3385 CDS JH724260.1 4616650 4617741 1 + 1092 Membrane fusion protein of RND family multidrug efflux pump Multidrug Resistance Efflux Pumps
fig|6666666.230108.peg.3386 CDS JH724260.1 4617767 4620880 2 + 3114 RND efflux system, inner membrane transporter CmeB Multidrug Resistance Efflux Pumps
fig|6666666.230108.peg.3387 CDS JH724260.1 4621017 4621907 3 + 891 Beta-lactamase (EC 3.5.2.6) Beta-lactamase
fig|6666666.230108.peg.3388 CDS JH724260.1 4622387 4621938 -2 - 450 FIG00936906: hypothetical protein - none -
fig|6666666.230108.peg.3389 CDS JH724260.1 4622452 4623228 1 + 777 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.230108.peg.3390 CDS JH724260.1 4623271 4624290 1 + 1020 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.230108.peg.3391 CDS JH724260.1 4625182 4625643 1 + 462 FIG00939128: hypothetical protein - none -
fig|6666666.230108.peg.3392 CDS JH724260.1 4625761 4626537 1 + 777 Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.230108.peg.3393 CDS JH724260.1 4626525 4627436 3 + 912 Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.230108.peg.3394 CDS JH724260.1 4628207 4627530 -2 - 678 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.230108.peg.3395 CDS JH724260.1 4628297 4630294 2 + 1998 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.230108.peg.3396 CDS JH724260.1 4630398 4631291 3 + 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230108.peg.3397 CDS JH724260.1 4632190 4633110 1 + 921 Mobile element protein - none -
fig|6666666.230108.peg.3398 CDS JH724260.1 4635882 4633585 -3 - 2298 putative patatin-like phospholipase - none -
fig|6666666.230108.peg.3399 CDS JH724260.1 4638112 4636064 -1 - 2049 Chaperone protein HtpG Protein chaperones
fig|6666666.230108.peg.3400 CDS JH724260.1 4640752 4638224 -1 - 2529 ATP-dependent Clp protease ATP-binding subunit ClpA ClpAS cluster;
Proteolysis in bacteria, ATP-dependent;
Ribosome recycling related cluster
fig|6666666.230108.peg.3401 CDS JH724260.1 4641054 4643582 3 + 2529 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.230108.peg.3402 CDS JH724260.1 4643613 4644854 3 + 1242 putative tetratricopeptide repeat family protein - none -
fig|6666666.230108.peg.3403 CDS JH724260.1 4646172 4645042 -3 - 1131 UspA - none -
fig|6666666.230108.peg.3404 CDS JH724260.1 4646534 4646253 -2 - 282 FIG00898612: hypothetical protein - none -
fig|6666666.230108.peg.3405 CDS JH724260.1 4647623 4646778 -2 - 846 BatE Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230108.peg.3406 CDS JH724260.1 4649478 4647634 -3 - 1845 BatD Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230108.peg.3407 CDS JH724260.1 4650207 4649500 -3 - 708 BatC Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230108.peg.3408 CDS JH724260.1 4651235 4650207 -2 - 1029 BatB Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230108.peg.3409 CDS JH724260.1 4652298 4651315 -3 - 984 BatA (Bacteroides aerotolerance operon) Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230108.peg.3410 CDS JH724260.1 4653473 4652394 -2 - 1080 FIG00936810: hypothetical protein - none -
fig|6666666.230108.peg.3411 CDS JH724260.1 4654350 4653481 -3 - 870 hypothetical protein PA3071 Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230108.peg.3412 CDS JH724260.1 4655514 4654519 -3 - 996 MoxR-like ATPase in aerotolerance operon Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.230108.peg.3413 CDS JH724260.1 4656889 4655708 -1 - 1182 putative integration host factor IHF alpha subunit - none -
fig|6666666.230108.peg.3414 CDS JH724260.1 4657137 4656916 -3 - 222 Integration host factor alpha subunit DNA structural proteins, bacterial
fig|6666666.230108.peg.3415 CDS JH724260.1 4658565 4657267 -3 - 1299 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.230108.peg.3416 CDS JH724260.1 4659521 4658562 -2 - 960 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.230108.peg.3417 CDS JH724260.1 4659930 4659772 -3 - 159 FIG00402702: hypothetical protein - none -
fig|6666666.230108.peg.3418 CDS JH724260.1 4660133 4659945 -2 - 189 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent - none -
fig|6666666.230108.peg.3419 CDS JH724260.1 4660414 4660154 -1 - 261 LSU ribosomal protein L28p - none -
fig|6666666.230108.peg.3420 CDS JH724260.1 4661003 4660536 -2 - 468 Molybdopterin binding motif, CinA N-terminal domain / C-terminal domain of CinA type S NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.230108.peg.3421 CDS JH724260.1 4662039 4661017 -3 - 1023 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ
fig|6666666.230108.peg.3422 CDS JH724260.1 4662244 4666716 1 + 4473 FIG00937153: hypothetical protein - none -
fig|6666666.230108.peg.3423 CDS JH724260.1 4668509 4666875 -2 - 1635 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.230108.peg.3424 CDS JH724260.1 4668660 4669493 3 + 834 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.230108.peg.3425 CDS JH724260.1 4669578 4670072 3 + 495 hypothetical protein - none -
fig|6666666.230108.peg.3426 CDS JH724260.1 4671308 4670142 -2 - 1167 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) De Novo Purine Biosynthesis
fig|6666666.230108.peg.3427 CDS JH724260.1 4672964 4671447 -2 - 1518 Ribosylnicotinamide kinase (EC 2.7.1.22) homolog / Unknown conserved in Flavobacteria - none -
fig|6666666.230108.peg.3428 CDS JH724260.1 4673070 4675289 3 + 2220 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I Stringent Response, (p)ppGpp metabolism
fig|6666666.230108.peg.3429 CDS JH724260.1 4675306 4675677 1 + 372 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.230108.peg.3430 CDS JH724260.1 4676603 4675653 -2 - 951 Major facilitator family transporter - none -
fig|6666666.230108.peg.3431 CDS JH724260.1 4677348 4676611 -3 - 738 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.230108.peg.3432 CDS JH724260.1 4678227 4677502 -3 - 726 putative phosphatase/phosphohexomutase - none -
fig|6666666.230108.peg.3433 CDS JH724260.1 4678268 4679623 2 + 1356 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230108.peg.3434 CDS JH724260.1 4680307 4679753 -1 - 555 ABC transporter, permease protein - none -
fig|6666666.230108.peg.3435 CDS JH724260.1 4680809 4680261 -2 - 549 ABC transporter, permease protein - none -
fig|6666666.230108.peg.3436 CDS JH724260.1 4683189 4680865 -3 - 2325 ABC transporter permease protein - none -
fig|6666666.230108.peg.3437 CDS JH724260.1 4685543 4683240 -2 - 2304 ABC transporter permease protein - none -
fig|6666666.230108.peg.3438 CDS JH724260.1 4686248 4685565 -2 - 684 ABC transporter ATP-binding protein - none -
fig|6666666.230108.peg.3439 CDS JH724260.1 4688588 4686273 -2 - 2316 ABC transporter permease protein - none -
fig|6666666.230108.peg.3440 CDS JH724260.1 4688859 4689680 3 + 822 putative calcineurin superfamily phosphohydrolase - none -
fig|6666666.230108.peg.3441 CDS JH724260.1 4689781 4690392 1 + 612 FIG00403603: hypothetical protein - none -
fig|6666666.230108.peg.3442 CDS JH724260.1 4690636 4692006 1 + 1371 Two-component system response regulator - none -
fig|6666666.230108.peg.3443 CDS JH724260.1 4691996 4693303 2 + 1308 Sensor histidine kinase - none -
fig|6666666.230108.peg.3444 CDS JH724260.1 4693398 4694849 3 + 1452 Na(+)/H(+) antiporter - none -
fig|6666666.230108.peg.3445 CDS JH724260.1 4694965 4696632 1 + 1668 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.230108.peg.3446 CDS JH724260.1 4699129 4696976 -1 - 2154 Alpha-glucosidase SusB (EC 3.2.1.20) Cellulosome
fig|6666666.230108.peg.3447 CDS JH724260.1 4701649 4699151 -1 - 2499 Alpha-xylosidase (EC 3.2.1.-) Xylose utilization
fig|6666666.230108.peg.3448 CDS JH724260.1 4703483 4701684 -2 - 1800 dextranase precursor - none -
fig|6666666.230108.peg.3449 CDS JH724260.1 4704993 4703497 -3 - 1497 FIG00403304: hypothetical protein - none -
fig|6666666.230108.peg.3450 CDS JH724260.1 4706518 4705013 -1 - 1506 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.3451 CDS JH724260.1 4709484 4706518 -3 - 2967 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.3452 CDS JH724260.1 4709594 4709719 2 + 126 hypothetical protein - none -
fig|6666666.230108.peg.3453 CDS JH724260.1 4711428 4709770 -3 - 1659 Regulatory protein SusR Cellulosome
fig|6666666.230108.peg.3454 CDS JH724260.1 4711625 4711503 -2 - 123 hypothetical protein - none -
fig|6666666.230108.peg.3455 CDS JH724260.1 4711575 4712936 3 + 1362 FIG00417958: hypothetical protein - none -
fig|6666666.230108.peg.3456 CDS JH724260.1 4713023 4713439 2 + 417 Ser-tRNA(Ala) deacylase; Gly-tRNA(Ala) deacylase tRNA aminoacylation, Ala;
tRNA aminoacylation, Ala
fig|6666666.230108.peg.3457 CDS JH724260.1 4713754 4714128 1 + 375 Small heat shock protein - none -
fig|6666666.230108.peg.3458 CDS JH724260.1 4715345 4714209 -2 - 1137 Acyltransferase - none -
fig|6666666.230108.peg.3459 CDS JH724260.1 4716773 4715658 -2 - 1116 ABC-type multidrug transport system, permease component - none -
fig|6666666.230108.peg.3460 CDS JH724260.1 4716876 4716754 -3 - 123 hypothetical protein - none -
fig|6666666.230108.peg.3461 CDS JH724260.1 4717989 4716886 -3 - 1104 ABC transport system, permease component YbhR - none -
fig|6666666.230108.peg.3462 CDS JH724260.1 4719494 4718037 -2 - 1458 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.230108.peg.3463 CDS JH724260.1 4720362 4719472 -3 - 891 FIG00938133: hypothetical protein - none -
fig|6666666.230108.peg.3464 CDS JH724260.1 4721659 4720397 -1 - 1263 Type I secretion system, outer membrane component LapE - none -
fig|6666666.230108.peg.3465 CDS JH724260.1 4721919 4721758 -3 - 162 hypothetical protein - none -
fig|6666666.230108.peg.3466 CDS JH724260.1 4721953 4722744 1 + 792 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.3467 CDS JH724260.1 4723295 4722747 -2 - 549 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.230108.peg.3468 CDS JH724260.1 4726575 4723333 -3 - 3243 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.230108.peg.3469 CDS JH724260.1 4727863 4726787 -1 - 1077 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.230108.peg.3470 CDS JH724260.1 4729755 4727872 -3 - 1884 Amidophosphoribosyltransferase (EC 2.4.2.14) Colicin V and Bacteriocin Production Cluster;
De Novo Purine Biosynthesis
fig|6666666.230108.peg.3471 CDS JH724260.1 4731746 4729902 -2 - 1845 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.230108.peg.3472 CDS JH724260.1 4732115 4736665 2 + 4551 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230108.peg.3473 CDS JH724260.1 4736741 4738108 2 + 1368 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230108.peg.3474 CDS JH724260.1 4738219 4739877 1 + 1659 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230108.peg.3475 CDS JH724260.1 4740582 4740079 -3 - 504 hypothetical protein - none -
fig|6666666.230108.peg.3476 CDS JH724260.1 4742088 4740745 -3 - 1344 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.230108.peg.3477 CDS JH724260.1 4743121 4742126 -1 - 996 UDP-glucuronate 5@1-epimerase (EC 5.1.3.12) CBSS-296591.1.peg.2330
fig|6666666.230108.peg.3478 CDS JH724260.1 4743192 4743314 3 + 123 hypothetical protein - none -
fig|6666666.230108.peg.3479 CDS JH724260.1 4743914 4743327 -2 - 588 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230108.peg.3480 CDS JH724260.1 4745127 4743898 -3 - 1230 Aminotransferase - none -
fig|6666666.230108.peg.3481 CDS JH724260.1 4746480 4745689 -3 - 792 Amylovoran biosynthesis glycosyl transferase amsE (EC 2.-.-.-) - none -
fig|6666666.230108.peg.3482 CDS JH724260.1 4747647 4746514 -3 - 1134 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230108.peg.3483 CDS JH724260.1 4748632 4747652 -1 - 981 hypothetical protein - none -
fig|6666666.230108.peg.3484 CDS JH724260.1 4749720 4748632 -3 - 1089 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230108.peg.3485 CDS JH724260.1 4750787 4749717 -2 - 1071 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230108.peg.3486 CDS JH724260.1 4751968 4750784 -1 - 1185 hypothetical protein - none -
fig|6666666.230108.peg.3487 CDS JH724260.1 4752660 4751965 -3 - 696 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.230108.peg.3488 CDS JH724260.1 4754014 4752824 -1 - 1191 COGs COG2843 - none -
fig|6666666.230108.peg.3489 CDS JH724260.1 4755123 4754011 -3 - 1113 capsular polysaccharide biosynthesis protein Rhamnose containing glycans
fig|6666666.230108.peg.3490 CDS JH724260.1 4756182 4755127 -3 - 1056 hypothetical protein - none -
fig|6666666.230108.peg.3491 CDS JH724260.1 4757324 4756179 -2 - 1146 Related to F420H2-dehydrogenase, beta subunit - none -
fig|6666666.230108.peg.3492 CDS JH724260.1 4759016 4757346 -2 - 1671 putative flippase - none -
fig|6666666.230108.peg.3493 CDS JH724260.1 4759716 4759066 -3 - 651 Mobile element protein - none -
fig|6666666.230108.peg.3494 CDS JH724260.1 4760049 4759825 -3 - 225 Mobile element protein - none -
fig|6666666.230108.peg.3495 CDS JH724260.1 4760312 4760112 -2 - 201 Mobile element protein - none -
fig|6666666.230108.peg.3496 CDS JH724260.1 4762405 4760849 -1 - 1557 hypothetical protein - none -
fig|6666666.230108.peg.3497 CDS JH724260.1 4762622 4762479 -2 - 144 UpdZ protein - none -
fig|6666666.230108.peg.3498 CDS JH724260.1 4763407 4763646 1 + 240 transposase - none -
fig|6666666.230108.peg.3499 CDS JH724260.1 4764071 4763811 -2 - 261 UpdZ protein - none -
fig|6666666.230108.peg.3500 CDS JH724260.1 4764683 4764153 -2 - 531 Transcription antitermination protein UpdY Transcription factors bacterial
fig|6666666.230108.peg.3501 CDS JH724260.1 4765305 4765664 3 + 360 hypothetical protein - none -
fig|6666666.230108.peg.3502 CDS JH724260.1 4765845 4766210 3 + 366 hypothetical protein - none -
fig|6666666.230108.peg.3503 CDS JH724260.1 4766235 4766936 3 + 702 DnaD domain protein - none -
fig|6666666.230108.peg.3504 CDS JH724260.1 4766996 4767760 2 + 765 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.230108.peg.3505 CDS JH724260.1 4768101 4768949 3 + 849 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230108.peg.3506 CDS JH724260.1 4768977 4770209 3 + 1233 L,L-diaminopimelate aminotransferase (EC 2.6.1.83) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230108.peg.3507 CDS JH724260.1 4770296 4771021 2 + 726 FrrB - none -
fig|6666666.230108.peg.3508 CDS JH724260.1 4771100 4771456 2 + 357 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.230108.peg.3509 CDS JH724260.1 4771515 4772783 3 + 1269 Ammonium transporter family Ammonia assimilation
fig|6666666.230108.peg.3510 CDS JH724260.1 4772829 4775018 3 + 2190 Glutamine synthetase type III, GlnN (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.230108.peg.3511 CDS JH724260.1 4775201 4775076 -2 - 126 hypothetical protein - none -
fig|6666666.230108.peg.3512 CDS JH724260.1 4775200 4776498 1 + 1299 putative secreted tripeptidyl aminopeptidase - none -
fig|6666666.230108.peg.3513 CDS JH724260.1 4777159 4776584 -1 - 576 FIG00412396: hypothetical protein - none -
fig|6666666.230108.peg.3514 CDS JH724260.1 4777398 4777225 -3 - 174 hypothetical protein - none -
fig|6666666.230108.peg.3515 CDS JH724260.1 4777788 4778963 3 + 1176 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230108.peg.3516 CDS JH724260.1 4779047 4780447 2 + 1401 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230108.peg.3517 CDS JH724260.1 4780594 4781220 1 + 627 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.230108.peg.3518 CDS JH724260.1 4781270 4782265 2 + 996 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230108.peg.3519 CDS JH724260.1 4782270 4783097 3 + 828 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230108.peg.3520 CDS JH724260.1 4783221 4783817 3 + 597 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230108.peg.3521 CDS JH724260.1 4784007 4783825 -3 - 183 hypothetical protein - none -
fig|6666666.230108.peg.3522 CDS JH724260.1 4783987 4784766 1 + 780 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.230108.peg.3523 CDS JH724260.1 4784908 4785951 1 + 1044 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230108.peg.3524 CDS JH724260.1 4786120 4788399 1 + 2280 FIG00403729: hypothetical protein - none -
fig|6666666.230108.peg.3525 CDS JH724260.1 4788425 4788784 2 + 360 putative two-component system response regulator - none -
fig|6666666.230108.peg.3526 CDS JH724260.1 4788797 4789969 2 + 1173 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) CBSS-258594.1.peg.3339
fig|6666666.230108.peg.3527 CDS JH724260.1 4789962 4790840 3 + 879 FIG00898846: hypothetical protein - none -
fig|6666666.230108.peg.3528 CDS JH724260.1 4790848 4793007 1 + 2160 Tyrosine-protein kinase Wzc (EC 2.7.10.2) CBSS-258594.1.peg.3339
fig|6666666.230108.peg.3529 CDS JH724260.1 4793014 4794465 1 + 1452 Teichuronic acid biosynthesis protein TuaE, putative secreted polysaccharide polymerase - none -
fig|6666666.230108.peg.3530 CDS JH724260.1 4794489 4795694 3 + 1206 FIG00897759: hypothetical protein - none -
fig|6666666.230108.peg.3531 CDS JH724260.1 4795691 4796812 2 + 1122 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230108.peg.3532 CDS JH724260.1 4796825 4798027 2 + 1203 Glycosyl transferase, group 1 CBSS-258594.1.peg.3339
fig|6666666.230108.peg.3533 CDS JH724260.1 4798024 4798977 1 + 954 Biotin carboxylase (EC 6.3.4.14) - none -
fig|6666666.230108.peg.3534 CDS JH724260.1 4799868 4798957 -3 - 912 acyltransferase 3 - none -
fig|6666666.230108.peg.3535 CDS JH724260.1 4799896 4800045 1 + 150 hypothetical protein - none -
fig|6666666.230108.peg.3536 CDS JH724260.1 4800205 4800345 1 + 141 hypothetical protein - none -
fig|6666666.230108.peg.3537 CDS JH724260.1 4800776 4801627 2 + 852 FIG00418196: hypothetical protein - none -
fig|6666666.230108.peg.3538 CDS JH724260.1 4801908 4803722 3 + 1815 DNA primase/helicase (EC 2.7.7.-) - none -
fig|6666666.230108.peg.3539 CDS JH724260.1 4803804 4804055 3 + 252 FIG00417360: hypothetical protein - none -
fig|6666666.230108.peg.3540 CDS JH724260.1 4804155 4804030 -3 - 126 hypothetical protein - none -
fig|6666666.230108.peg.3541 CDS JH724260.1 4804461 4804976 3 + 516 FIG00416394: hypothetical protein - none -
fig|6666666.230108.peg.3542 CDS JH724260.1 4805059 4805172 1 + 114 hypothetical protein - none -
fig|6666666.230108.peg.3543 CDS JH724260.1 4805206 4805649 1 + 444 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230108.peg.3544 CDS JH724260.1 4805664 4805786 3 + 123 hypothetical protein - none -
fig|6666666.230108.peg.3545 CDS JH724260.1 4805755 4806915 1 + 1161 Conserved protein, with a weak D-galactarate dehydratase/altronate hydrolase domain - none -
fig|6666666.230108.peg.3546 CDS JH724260.1 4808091 4807072 -3 - 1020 Glycosyl transferase, family 2 - none -
fig|6666666.230108.peg.3547 CDS JH724260.1 4809371 4808121 -2 - 1251 glycosyl transferase, group 1 family protein - none -
fig|6666666.230108.peg.3548 CDS JH724260.1 4809524 4811059 2 + 1536 O-antigen flippase Wzx - none -
fig|6666666.230108.peg.3549 CDS JH724260.1 4812237 4811053 -3 - 1185 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230108.peg.3550 CDS JH724260.1 4813289 4812249 -2 - 1041 glycosyltransferase family 2 protein - none -
fig|6666666.230108.peg.3551 CDS JH724260.1 4814346 4813297 -3 - 1050 Beta-1,3-glucosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.230108.peg.3552 CDS JH724260.1 4816252 4814351 -1 - 1902 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230108.peg.3553 CDS JH724260.1 4817462 4816290 -2 - 1173 FIG00418002: hypothetical protein - none -
fig|6666666.230108.peg.3554 CDS JH724260.1 4818771 4818103 -3 - 669 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.230108.peg.3555 CDS JH724260.1 4819133 4818858 -2 - 276 FIG00416149: hypothetical protein - none -
fig|6666666.230108.peg.3556 CDS JH724260.1 4820300 4819275 -2 - 1026 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.230108.peg.3557 CDS JH724260.1 4820675 4821697 2 + 1023 Transcriptional regulator - none -
fig|6666666.230108.peg.3558 CDS JH724260.1 4821854 4823365 2 + 1512 Altronate dehydratase (EC 4.2.1.7) - none -
fig|6666666.230108.peg.3559 CDS JH724260.1 4823608 4824918 1 + 1311 Methionine transporter MetT Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230108.peg.3560 CDS JH724260.1 4825080 4825628 3 + 549 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.230108.peg.3561 CDS JH724260.1 4825752 4826849 3 + 1098 Thiol:disulfide interchange protein - none -
fig|6666666.230108.peg.3562 CDS JH724260.1 4827993 4827028 -3 - 966 Methionine synthase II (cobalamin-independent) - none -
fig|6666666.230108.peg.3563 CDS JH724260.1 4828419 4830626 3 + 2208 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.230108.peg.3564 CDS JH724260.1 4830757 4831263 1 + 507 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.230108.peg.3565 CDS JH724260.1 4832774 4831428 -2 - 1347 FIG00899271: hypothetical protein - none -
fig|6666666.230108.peg.3566 CDS JH724260.1 4832887 4833609 1 + 723 FIG00408327: hypothetical protein - none -
fig|6666666.230108.peg.3567 CDS JH724260.1 4834384 4833638 -1 - 747 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.230108.peg.3568 CDS JH724260.1 4834717 4834421 -1 - 297 hypothetical protein - none -
fig|6666666.230108.peg.3569 CDS JH724260.1 4834961 4835467 2 + 507 Flavodoxin 1 Flavodoxin
fig|6666666.230108.peg.3570 CDS JH724260.1 4838156 4835592 -2 - 2565 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.3571 CDS JH724260.1 4839848 4838187 -2 - 1662 Glycogen - none -
fig|6666666.230108.peg.3572 CDS JH724260.1 4840563 4840144 -3 - 420 V-type ATP synthase subunit K (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230108.peg.3573 CDS JH724260.1 4842423 4840597 -3 - 1827 V-type ATP synthase subunit I (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230108.peg.3574 CDS JH724260.1 4843025 4842420 -2 - 606 V-type ATP synthase subunit D (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230108.peg.3575 CDS JH724260.1 4844471 4843146 -2 - 1326 V-type ATP synthase subunit B (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230108.peg.3576 CDS JH724260.1 4846373 4844619 -2 - 1755 V-type ATP synthase subunit A (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230108.peg.3577 CDS JH724260.1 4847232 4846393 -3 - 840 V-type ATP synthase subunit C (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230108.peg.3578 CDS JH724260.1 4847839 4847249 -1 - 591 V-type ATP synthase subunit E (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.230108.peg.3579 CDS JH724260.1 4847934 4848068 3 + 135 hypothetical protein - none -
fig|6666666.230108.peg.3580 CDS JH724260.1 4853642 4853511 -2 - 132 hypothetical protein - none -
fig|6666666.230108.peg.3581 CDS JH724260.1 4854159 4853977 -3 - 183 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230108.peg.3582 CDS JH724260.1 4854160 4854276 1 + 117 hypothetical protein - none -
fig|6666666.230108.peg.3583 CDS JH724260.1 4855266 4854985 -3 - 282 hypothetical protein - none -
fig|6666666.230108.peg.3584 CDS JH724260.1 4856019 4856201 3 + 183 hypothetical protein - none -
fig|6666666.230108.peg.3585 CDS JH724260.1 4856508 4856693 3 + 186 hypothetical protein - none -
fig|6666666.230108.peg.3586 CDS JH724260.1 4856707 4857549 1 + 843 hypothetical protein - none -
fig|6666666.230108.peg.3587 CDS JH724260.1 4857769 4858764 1 + 996 FIG00936932: hypothetical protein - none -
fig|6666666.230108.peg.3588 CDS JH724260.1 4859234 4859659 2 + 426 Integrase - none -
fig|6666666.230108.peg.3589 CDS JH724260.1 4860683 4861024 2 + 342 hypothetical protein - none -
fig|6666666.230108.peg.3590 CDS JH724260.1 4861101 4861493 3 + 393 hypothetical protein - none -
fig|6666666.230108.peg.3591 CDS JH724260.1 4862613 4863473 3 + 861 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.230108.peg.3592 CDS JH724260.1 4863648 4863797 3 + 150 hypothetical protein - none -
fig|6666666.230108.peg.3593 CDS JH724260.1 4863809 4864108 2 + 300 hypothetical protein - none -
fig|6666666.230108.peg.3594 CDS JH724260.1 4864111 4864779 1 + 669 hypothetical protein - none -
fig|6666666.230108.peg.3595 CDS JH724260.1 4865010 4865930 3 + 921 hypothetical protein - none -
fig|6666666.230108.peg.3596 CDS JH724260.1 4868058 4866400 -3 - 1659 integrase, putative - none -
fig|6666666.230108.peg.3597 CDS JH724260.1 4868325 4868110 -3 - 216 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230108.peg.3598 CDS JH724260.1 4869142 4868630 -1 - 513 FIG00417660: hypothetical protein - none -
fig|6666666.230108.peg.3599 CDS JH724260.1 4870771 4869395 -1 - 1377 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.230108.peg.3600 CDS JH724260.1 4871420 4870764 -2 - 657 hypothetical protein - none -
fig|6666666.230108.peg.3601 CDS JH724260.1 4871910 4871608 -3 - 303 hypothetical protein - none -
fig|6666666.230108.peg.3602 CDS JH724260.1 4872213 4872073 -3 - 141 hypothetical protein - none -
fig|6666666.230108.peg.3603 CDS JH724260.1 4872668 4872231 -2 - 438 hypothetical protein - none -
fig|6666666.230108.peg.3604 CDS JH724260.1 4872822 4872709 -3 - 114 hypothetical protein - none -
fig|6666666.230108.peg.3605 CDS JH724260.1 4873220 4875226 2 + 2007 FIG00415354: hypothetical protein - none -
fig|6666666.230108.peg.3606 CDS JH724260.1 4875372 4875851 3 + 480 hypothetical protein - none -
fig|6666666.230108.peg.3607 CDS JH724260.1 4875848 4878079 2 + 2232 Biotin synthase (EC 2.8.1.6) / Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin biosynthesis Experimental
fig|6666666.230108.peg.3608 CDS JH724260.1 4878182 4879393 2 + 1212 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.230108.peg.3609 CDS JH724260.1 4879400 4880089 2 + 690 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.230108.peg.3610 CDS JH724260.1 4880074 4880850 1 + 777 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.230108.peg.3611 CDS JH724260.1 4880850 4881497 3 + 648 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.230108.peg.3612 CDS JH724260.1 4881527 4882699 2 + 1173 Glycosyl transferase, family 2 - none -
fig|6666666.230108.peg.3613 CDS JH724260.1 4883949 4882705 -3 - 1245 ABC transporter, permease protein - none -
fig|6666666.230108.peg.3614 CDS JH724260.1 4885165 4883960 -1 - 1206 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.230108.peg.3615 CDS JH724260.1 4885428 4886663 3 + 1236 FIG00413399: hypothetical protein - none -
fig|6666666.230108.peg.3616 CDS JH724260.1 4889267 4886664 -2 - 2604 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.3617 CDS JH724260.1 4890608 4889361 -2 - 1248 ABC transporter permease - none -
fig|6666666.230108.peg.3618 CDS JH724260.1 4891879 4890647 -1 - 1233 Macrolide-specific ABC-type efflux carrier (TC 3.A.1.122.1) - none -
fig|6666666.230108.peg.3619 CDS JH724260.1 4893133 4891886 -1 - 1248 ABC transporter permease - none -
fig|6666666.230108.peg.3620 CDS JH724260.1 4894454 4893156 -2 - 1299 Macrolide-specific ABC-type efflux carrier (TC 3.A.1.122.1) - none -
fig|6666666.230108.peg.3621 CDS JH724260.1 4895130 4894507 -3 - 624 FIG00402683: hypothetical protein - none -
fig|6666666.230108.peg.3622 CDS JH724260.1 4896404 4895172 -2 - 1233 ABC transporter permease - none -
fig|6666666.230108.peg.3623 CDS JH724260.1 4897721 4896447 -2 - 1275 Macrolide-specific ABC-type efflux carrier (TC 3.A.1.122.1) - none -
fig|6666666.230108.peg.3624 CDS JH724260.1 4898437 4897772 -1 - 666 ABC transporter ATP-binding protein - none -
fig|6666666.230108.peg.3625 CDS JH724260.1 4899892 4898597 -1 - 1296 ABC transporter permease - none -
fig|6666666.230108.peg.3626 CDS JH724260.1 4901228 4899909 -2 - 1320 Macrolide-specific ABC-type efflux carrier (TC 3.A.1.122.1) - none -
fig|6666666.230108.peg.3627 CDS JH724260.1 4902472 4901225 -1 - 1248 ABC transporter permease - none -
fig|6666666.230108.peg.3628 CDS JH724260.1 4903539 4902616 -3 - 924 Hemagglutinin - none -
fig|6666666.230108.peg.3629 CDS JH724260.1 4903641 4904123 3 + 483 Cytidine deaminase (EC 3.5.4.5) Murein hydrolase regulation and cell death;
tRNA modification Bacteria
fig|6666666.230108.peg.3630 CDS JH724260.1 4904482 4906116 1 + 1635 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.230108.peg.3631 CDS JH724260.1 4906222 4906761 1 + 540 iron-sulfur flavoprotein - none -
fig|6666666.230108.peg.3632 CDS JH724260.1 4906794 4908290 3 + 1497 Ferredoxin-type protein NapG (periplasmic nitrate reductase) Nitrate and nitrite ammonification
fig|6666666.230108.peg.3633 CDS JH724260.1 4908339 4909742 3 + 1404 Fe-S oxidoreductase - none -
fig|6666666.230108.peg.3634 CDS JH724260.1 4909895 4911766 2 + 1872 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.3635 CDS JH724260.1 4911781 4912290 1 + 510 hypothetical protein - none -
fig|6666666.230108.peg.3636 CDS JH724260.1 4913803 4912316 -1 - 1488 FIG00416115: hypothetical protein - none -
fig|6666666.230108.peg.3637 CDS JH724260.1 4915337 4913790 -2 - 1548 MoxR-like ATPase - none -
fig|6666666.230108.peg.3638 CDS JH724260.1 279755 280459 2 + 705 FIG00406312: hypothetical protein - none -
fig|6666666.230108.peg.3639 CDS JH724260.1 283069 280547 -1 - 2523 Beta-mannosidase (EC 3.2.1.25) Mannose Metabolism
fig|6666666.230108.peg.3640 CDS JH724260.1 284703 283747 -3 - 957 ABC-type transport, permease protein - none -
fig|6666666.230108.peg.3641 CDS JH724260.1 285439 284696 -1 - 744 ABC-type multidrug transport system, ATPase component - none -
fig|6666666.230108.peg.3642 CDS JH724260.1 286587 285442 -3 - 1146 S-layer domain - none -
fig|6666666.230108.peg.3643 CDS JH724260.1 286776 287831 3 + 1056 FIG00413549: hypothetical protein - none -
fig|6666666.230108.peg.3644 CDS JH724260.1 288947 287838 -2 - 1110 Dienelactone hydrolase and related enzymes - none -
fig|6666666.230108.peg.3645 CDS JH724260.1 289480 288944 -1 - 537 Flavodoxin Flavodoxin
fig|6666666.230108.peg.3646 CDS JH724260.1 289947 290405 3 + 459 Very-short-patch mismatch repair endonuclease (G-T specific) DNA repair, bacterial
fig|6666666.230108.peg.3647 CDS JH724260.1 290457 291494 3 + 1038 Very-short-patch mismatch repair endonuclease (G-T specific) DNA repair, bacterial
fig|6666666.230108.peg.3648 CDS JH724260.1 293226 296036 3 + 2811 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.230108.peg.3649 CDS JH724260.1 296623 296474 -1 - 150 hypothetical protein - none -
fig|6666666.230108.peg.3650 CDS JH724260.1 296622 296993 3 + 372 Mobile element protein - none -
fig|6666666.230108.peg.3651 CDS JH724260.1 297067 298638 1 + 1572 Mobile element protein - none -
fig|6666666.230108.peg.3652 CDS JH724260.1 299038 298763 -1 - 276 hypothetical protein - none -
fig|6666666.230108.peg.3653 CDS JH724260.1 299870 299703 -2 - 168 hypothetical protein - none -
fig|6666666.230108.peg.3654 CDS JH724260.1 299940 300275 3 + 336 FIG00937196: hypothetical protein - none -
fig|6666666.230108.peg.3655 CDS JH724260.1 300367 300525 1 + 159 hypothetical protein - none -
fig|6666666.230108.peg.3656 CDS JH724260.1 300829 300665 -1 - 165 hypothetical protein - none -
fig|6666666.230108.peg.3657 CDS JH724260.1 300839 300985 2 + 147 hypothetical protein - none -
fig|6666666.230108.peg.3658 CDS JH724260.1 300990 302273 3 + 1284 FIG00937820: hypothetical protein - none -
fig|6666666.230108.peg.3659 CDS JH724260.1 302293 302541 1 + 249 FIG00405607: hypothetical protein - none -
fig|6666666.230108.peg.3660 CDS JH724260.1 302701 302919 1 + 219 FIG00404869: hypothetical protein - none -
fig|6666666.230108.peg.3661 CDS JH724260.1 302919 303227 3 + 309 FIG00403252: hypothetical protein - none -
fig|6666666.230108.peg.3662 CDS JH724260.1 303413 303718 2 + 306 hypothetical protein - none -
fig|6666666.230108.peg.3663 CDS JH724260.1 304673 303942 -2 - 732 hypothetical protein - none -
fig|6666666.230108.peg.3664 CDS JH724260.1 305188 304760 -1 - 429 Conjugative transposon protein TraQ Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3665 CDS JH724260.1 305760 305197 -3 - 564 Conjugative transposon protein TraO Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3666 CDS JH724260.1 306760 305762 -1 - 999 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3667 CDS JH724260.1 308221 306788 -1 - 1434 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3668 CDS JH724260.1 308465 308205 -2 - 261 Conjugative transposon protein TraL Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3669 CDS JH724260.1 309100 308477 -1 - 624 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3670 CDS JH724260.1 310227 309124 -3 - 1104 Conjugative transposon protein TraJ Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3671 CDS JH724260.1 310860 310231 -3 - 630 Conjugative transposon protein TraI Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3672 CDS JH724260.1 311255 310887 -2 - 369 Conjugative transposon protein TraH Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3673 CDS JH724260.1 313772 311268 -2 - 2505 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3674 CDS JH724260.1 313906 313769 -1 - 138 Conjugative transposon protein TraF Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3675 CDS JH724260.1 313865 314023 2 + 159 hypothetical protein - none -
fig|6666666.230108.peg.3676 CDS JH724260.1 314400 314101 -3 - 300 Conjugative transposon protein TraE Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3677 CDS JH724260.1 315249 314551 -3 - 699 Conjugative transposon protein TraD Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3678 CDS JH724260.1 315680 315252 -2 - 429 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3679 CDS JH724260.1 316439 315684 -2 - 756 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3680 CDS JH724260.1 316801 316926 1 + 126 hypothetical protein - none -
fig|6666666.230108.peg.3681 CDS JH724260.1 317134 317559 1 + 426 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3682 CDS JH724260.1 317538 318806 3 + 1269 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3683 CDS JH724260.1 318833 319759 2 + 927 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3684 CDS JH724260.1 320456 322048 2 + 1593 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) Group II intron-associated genes
fig|6666666.230108.peg.3685 CDS JH724260.1 322089 323261 3 + 1173 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3686 CDS JH724260.1 324186 323344 -3 - 843 Tetracycline resistance element mobilization regulatory protein rteC - none -
fig|6666666.230108.peg.3687 CDS JH724260.1 325162 324308 -1 - 855 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.3688 CDS JH724260.1 326164 325415 -1 - 750 hypothetical protein - none -
fig|6666666.230108.peg.3689 CDS JH724260.1 326696 326253 -2 - 444 Two-component system response regulator - none -
fig|6666666.230108.peg.3690 CDS JH724260.1 327612 326827 -3 - 786 Two-component system response regulator - none -
fig|6666666.230108.peg.3691 CDS JH724260.1 328811 327609 -2 - 1203 putative two-component system sensor protein histidine kinase - none -
fig|6666666.230108.peg.3692 CDS JH724260.1 330447 329242 -3 - 1206 putative outer membrane protein - none -
fig|6666666.230108.peg.3693 CDS JH724260.1 331750 330434 -1 - 1317 FIG00896796: hypothetical protein - none -
fig|6666666.230108.peg.3694 CDS JH724260.1 331995 333002 3 + 1008 FIG00896337: hypothetical protein - none -
fig|6666666.230108.peg.3695 CDS JH724260.1 334215 333688 -3 - 528 FIG01201438: hypothetical protein - none -
fig|6666666.230108.peg.3696 CDS JH724260.1 340060 334340 -1 - 5721 putative DNA methylase - none -
fig|6666666.230108.peg.3697 CDS JH724260.1 340490 340050 -2 - 441 hypothetical protein - none -
fig|6666666.230108.peg.3698 CDS JH724260.1 343292 341187 -2 - 2106 DNA topoisomerase III, Bacteroidales-type (EC 5.99.1.2) DNA topoisomerases, Type I, ATP-independent
fig|6666666.230108.peg.3699 CDS JH724260.1 343557 343351 -3 - 207 hypothetical protein - none -
fig|6666666.230108.peg.3700 CDS JH724260.1 345004 343562 -1 - 1443 hypothetical protein - none -
fig|6666666.230108.peg.3701 CDS JH724260.1 345235 345038 -1 - 198 hypothetical protein - none -
fig|6666666.230108.peg.3702 CDS JH724260.1 345654 345358 -3 - 297 hypothetical protein - none -
fig|6666666.230108.peg.3703 CDS JH724260.1 346278 347465 3 + 1188 hypothetical protein - none -
fig|6666666.230108.peg.3704 CDS JH724260.1 348093 347581 -3 - 513 hypothetical protein - none -
fig|6666666.230108.peg.3705 CDS JH724260.1 349145 348192 -2 - 954 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.230108.peg.3706 CDS JH724260.1 349731 349330 -3 - 402 Putative DNA-binding protein in cluster with Type I restriction-modification system - none -
fig|6666666.230108.peg.3707 CDS JH724260.1 350983 349751 -1 - 1233 Transposase - none -
fig|6666666.230108.peg.3708 CDS JH724260.1 351616 352230 1 + 615 Transcriptional regulator, TetR family - none -
fig|6666666.230108.peg.3709 CDS JH724260.1 352282 353433 1 + 1152 Mobile element protein - none -
fig|6666666.230108.peg.3710 CDS JH724260.1 354388 354555 1 + 168 hypothetical protein - none -
fig|6666666.230108.peg.3711 CDS JH724260.1 354673 354795 1 + 123 hypothetical protein - none -
fig|6666666.230108.peg.3712 CDS JH724260.1 355041 355229 3 + 189 hypothetical protein - none -
fig|6666666.230108.peg.3713 CDS JH724260.1 355326 356003 3 + 678 hypothetical protein - none -
fig|6666666.230108.peg.3714 CDS JH724260.1 356064 356480 3 + 417 hypothetical protein - none -
fig|6666666.230108.peg.3715 CDS JH724260.1 358103 358798 2 + 696 hypothetical protein - none -
fig|6666666.230108.peg.3716 CDS JH724260.1 358861 359058 1 + 198 hypothetical protein - none -
fig|6666666.230108.peg.3717 CDS JH724260.1 359067 359261 3 + 195 hypothetical protein - none -
fig|6666666.230108.peg.3718 CDS JH724260.1 359272 359823 1 + 552 hypothetical protein - none -
fig|6666666.230108.peg.3719 CDS JH724260.1 359854 360696 1 + 843 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.3720 CDS JH724260.1 360770 361630 2 + 861 Tetracycline resistance element mobilization regulatory protein rteC - none -
fig|6666666.230108.peg.3721 CDS JH724260.1 361736 362095 2 + 360 FIG00404702: hypothetical protein - none -
fig|6666666.230108.peg.3722 CDS JH724260.1 362058 364130 3 + 2073 Toprim domain protein CBSS-315749.4.peg.3658
fig|6666666.230108.peg.3723 CDS JH724260.1 364536 365054 3 + 519 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.230108.peg.3724 CDS JH724260.1 367239 365152 -3 - 2088 DNA topoisomerase III, Bacteroidales-type (EC 5.99.1.2) DNA topoisomerases, Type I, ATP-independent
fig|6666666.230108.peg.3725 CDS JH724260.1 368570 367266 -2 - 1305 FIG00936597: hypothetical protein - none -
fig|6666666.230108.peg.3726 CDS JH724260.1 369127 369828 1 + 702 FIG00935812: hypothetical protein - none -
fig|6666666.230108.peg.3727 CDS JH724260.1 369838 370854 1 + 1017 FIG00936210: hypothetical protein - none -
fig|6666666.230108.peg.3728 CDS JH724260.1 372907 370898 -1 - 2010 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3729 CDS JH724260.1 374166 372928 -3 - 1239 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3730 CDS JH724260.1 374603 374181 -2 - 423 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3731 CDS JH724260.1 374874 375008 3 + 135 hypothetical protein - none -
fig|6666666.230108.peg.3732 CDS JH724260.1 375133 375966 1 + 834 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3733 CDS JH724260.1 375989 376366 2 + 378 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3734 CDS JH724260.1 376369 377031 1 + 663 Conjugative transposon protein TraD Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3735 CDS JH724260.1 377200 377496 1 + 297 Conjugative transposon protein TraE Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3736 CDS JH724260.1 377507 377869 2 + 363 Conjugative transposon protein TraF Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3737 CDS JH724260.1 377866 380379 1 + 2514 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3738 CDS JH724260.1 380391 380741 3 + 351 Conjugative transposon protein TraH Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3739 CDS JH724260.1 380762 381367 2 + 606 Conjugative transposon protein TraI Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3740 CDS JH724260.1 381387 382382 3 + 996 Conjugative transposon protein TraJ Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3741 CDS JH724260.1 382403 383026 2 + 624 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3742 CDS JH724260.1 383031 383327 3 + 297 Conjugative transposon protein TraL Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3743 CDS JH724260.1 383305 384621 1 + 1317 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3744 CDS JH724260.1 384651 384851 3 + 201 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3745 CDS JH724260.1 385394 385215 -2 - 180 hypothetical protein - none -
fig|6666666.230108.peg.3746 CDS JH724260.1 385384 387201 1 + 1818 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) Group II intron-associated genes
fig|6666666.230108.peg.3747 CDS JH724260.1 387191 388072 2 + 882 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3748 CDS JH724260.1 388076 388657 2 + 582 Conjugative transposon protein TraO Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3749 CDS JH724260.1 388677 389129 3 + 453 Conjugative transposon protein TraQ Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.3750 CDS JH724260.1 389142 389462 3 + 321 FIG00407344: hypothetical protein - none -
fig|6666666.230108.peg.3751 CDS JH724260.1 389489 389707 2 + 219 hypothetical protein - none -
fig|6666666.230108.peg.3752 CDS JH724260.1 390148 389666 -1 - 483 FIG00405607: hypothetical protein - none -
fig|6666666.230108.peg.3753 CDS JH724260.1 390381 390160 -3 - 222 FIG00404869: hypothetical protein - none -
fig|6666666.230108.peg.3754 CDS JH724260.1 390992 390459 -2 - 534 Antirestriction protein ArdA - none -
fig|6666666.230108.peg.3755 CDS JH724260.1 391482 391261 -3 - 222 hypothetical protein - none -
fig|6666666.230108.peg.3756 CDS JH724260.1 392155 391625 -1 - 531 Conserved domain protein - none -
fig|6666666.230108.peg.3757 CDS JH724260.1 393469 392240 -1 - 1230 Transposase - none -
fig|6666666.230108.peg.3758 CDS JH724260.1 393944 396481 2 + 2538 Recombination inhibitory protein MutS2 DNA repair, bacterial MutL-MutS system
fig|6666666.230108.peg.3759 CDS JH724260.1 396539 397750 2 + 1212 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions;
Pyruvate Alanine Serine Interconversions
fig|6666666.230108.peg.3760 CDS JH724260.1 398313 397831 -3 - 483 FIG00404078: hypothetical protein - none -
fig|6666666.230108.peg.3761 CDS JH724260.1 398811 398371 -3 - 441 putative periplasmic protein - none -
fig|6666666.230108.peg.3762 CDS JH724260.1 400193 398904 -2 - 1290 two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.3763 CDS JH724260.1 400867 400190 -1 - 678 DNA-binding response regulator - none -
fig|6666666.230108.peg.3764 CDS JH724260.1 401465 400917 -2 - 549 FIG00406732: hypothetical protein - none -
fig|6666666.230108.peg.3765 CDS JH724260.1 401978 401526 -2 - 453 FIG00414849: hypothetical protein - none -
fig|6666666.230108.peg.3766 CDS JH724260.1 402339 402112 -3 - 228 FIG00408671: hypothetical protein - none -
fig|6666666.230108.peg.3767 CDS JH724260.1 402361 402474 1 + 114 hypothetical protein - none -
fig|6666666.230108.peg.3768 CDS JH724260.1 402945 402466 -3 - 480 DNA-binding protein, histone-like family - none -
fig|6666666.230108.peg.3769 CDS JH724260.1 403346 403161 -2 - 186 FIG00402717: hypothetical protein - none -
fig|6666666.230108.peg.3770 CDS JH724260.1 403479 403592 3 + 114 hypothetical protein - none -
fig|6666666.230108.peg.3771 CDS JH724260.1 404508 403888 -3 - 621 putative DNA-binding protein - none -
fig|6666666.230108.peg.3772 CDS JH724260.1 404526 406310 3 + 1785 FIG00409117: hypothetical protein - none -
fig|6666666.230108.peg.3773 CDS JH724260.1 407048 406362 -2 - 687 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.230108.peg.3774 CDS JH724260.1 408883 407054 -1 - 1830 Potassium uptake protein, integral membrane component, KtrB - none -
fig|6666666.230108.peg.3775 CDS JH724260.1 409017 410384 3 + 1368 Tryptophan synthase beta chain like (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.230108.peg.3776 CDS JH724260.1 411979 410381 -1 - 1599 Voltage-gated chloride channel family protein - none -
fig|6666666.230108.peg.3777 CDS JH724260.1 412204 412052 -1 - 153 FIG00405231: hypothetical protein - none -
fig|6666666.230108.peg.3778 CDS JH724260.1 413892 412348 -3 - 1545 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.3779 CDS JH724260.1 414758 413898 -2 - 861 putative anti-sigma factor - none -
fig|6666666.230108.peg.3780 CDS JH724260.1 415306 414755 -1 - 552 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.3781 CDS JH724260.1 416623 415361 -1 - 1263 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.230108.peg.3782 CDS JH724260.1 417885 416857 -3 - 1029 Vitamin B12 ABC transporter, permease component BtuC Coenzyme B12 biosynthesis
fig|6666666.230108.peg.3783 CDS JH724260.1 418965 417967 -3 - 999 Vitamin B12 ABC transporter, B12-binding component BtuF Coenzyme B12 biosynthesis
fig|6666666.230108.peg.3784 CDS JH724260.1 420206 419106 -2 - 1101 FIG00897452: hypothetical protein - none -
fig|6666666.230108.peg.3785 CDS JH724260.1 422221 420260 -1 - 1962 Outer membrane vitamin B12 receptor BtuB Coenzyme B12 biosynthesis
fig|6666666.230108.peg.3786 CDS JH724260.1 422785 423867 1 + 1083 Haloacid dehalogenase-like hydrolase - none -
fig|6666666.230108.peg.3787 CDS JH724260.1 424003 424152 1 + 150 ATP-dependent DNA helicase - none -
fig|6666666.230108.peg.3788 CDS JH724260.1 424193 424549 2 + 357 ATP-dependent DNA helicase - none -
fig|6666666.230108.peg.3789 CDS JH724260.1 426562 424643 -1 - 1920 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.230108.peg.3790 CDS JH724260.1 427008 428408 3 + 1401 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230108.peg.3791 CDS JH724260.1 428462 429037 2 + 576 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230108.peg.3792 CDS JH724260.1 429910 429119 -1 - 792 FIG00403782: hypothetical protein - none -
fig|6666666.230108.peg.3793 CDS JH724260.1 430106 431299 2 + 1194 Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) Polyamine Metabolism
fig|6666666.230108.peg.3794 CDS JH724260.1 431352 431798 3 + 447 Thiol peroxidase, Bcp-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.230108.peg.3795 CDS JH724260.1 431817 432854 3 + 1038 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.230108.peg.3796 CDS JH724260.1 433632 432922 -3 - 711 FIG00412668: hypothetical protein - none -
fig|6666666.230108.peg.3797 CDS JH724260.1 434163 433639 -3 - 525 FIG00402774: hypothetical protein - none -
fig|6666666.230108.peg.3798 CDS JH724260.1 434659 434144 -1 - 516 putative RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.3799 CDS JH724260.1 435088 434789 -1 - 300 FIG00417241: hypothetical protein - none -
fig|6666666.230108.peg.3800 CDS JH724260.1 435243 435881 3 + 639 FIG00417513: hypothetical protein - none -
fig|6666666.230108.peg.3801 CDS JH724260.1 437169 436183 -3 - 987 Putative membrane protein YeiH - none -
fig|6666666.230108.peg.3802 CDS JH724260.1 438206 437319 -2 - 888 LysR family transcriptional regulator YeiE LysR-family proteins in Escherichia coli
fig|6666666.230108.peg.3803 CDS JH724260.1 438817 438221 -1 - 597 FIG00402765: hypothetical protein - none -
fig|6666666.230108.peg.3804 CDS JH724260.1 439361 441955 2 + 2595 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.230108.peg.3805 CDS JH724260.1 442472 442041 -2 - 432 FIG00937286: hypothetical protein - none -
fig|6666666.230108.peg.3806 CDS JH724260.1 443190 442582 -3 - 609 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.230108.peg.3807 CDS JH724260.1 444196 443180 -1 - 1017 FIG00935560: hypothetical protein - none -
fig|6666666.230108.peg.3808 CDS JH724260.1 444538 444212 -1 - 327 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.230108.peg.3809 CDS JH724260.1 445512 444586 -3 - 927 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.230108.peg.3810 CDS JH724260.1 445765 446139 1 + 375 FIG00897961: hypothetical protein - none -
fig|6666666.230108.peg.3811 CDS JH724260.1 446278 446868 1 + 591 LSU ribosomal protein L25p - none -
fig|6666666.230108.peg.3812 CDS JH724260.1 447130 447693 1 + 564 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Translation termination factors bacterial
fig|6666666.230108.peg.3813 CDS JH724260.1 447690 448109 3 + 420 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.230108.peg.3814 CDS JH724260.1 448126 449112 1 + 987 Oxidoreductase - none -
fig|6666666.230108.peg.3815 CDS JH724260.1 451404 449134 -3 - 2271 POTASSIUM/PROTON ANTIPORTER ROSB Potassium homeostasis
fig|6666666.230108.peg.3816 CDS JH724260.1 452707 451559 -1 - 1149 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis;
Histidine Biosynthesis
fig|6666666.230108.peg.3817 CDS JH724260.1 453929 452892 -2 - 1038 Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis
fig|6666666.230108.peg.3818 CDS JH724260.1 455291 453999 -2 - 1293 Histidinol dehydrogenase (EC 1.1.1.23) Histidine Biosynthesis
fig|6666666.230108.peg.3819 CDS JH724260.1 456344 455493 -2 - 852 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.230108.peg.3820 CDS JH724260.1 457264 456707 -1 - 558 FIG00404105: hypothetical protein - none -
fig|6666666.230108.peg.3821 CDS JH724260.1 457377 458462 3 + 1086 FIG00417980: hypothetical protein - none -
fig|6666666.230108.peg.3822 CDS JH724260.1 459107 458484 -2 - 624 FIG00403349: hypothetical protein - none -
fig|6666666.230108.peg.3823 CDS JH724260.1 459375 459247 -3 - 129 hypothetical protein - none -
fig|6666666.230108.peg.3824 CDS JH724260.1 461477 459405 -2 - 2073 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230108.peg.3825 CDS JH724260.1 463220 461490 -2 - 1731 Neuraminidase NanP Galactosylceramide and Sulfatide metabolism
fig|6666666.230108.peg.3826 CDS JH724260.1 464275 463226 -1 - 1050 hypothetical protein - none -
fig|6666666.230108.peg.3827 CDS JH724260.1 464654 464301 -2 - 354 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.3828 CDS JH724260.1 465773 464766 -2 - 1008 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.3829 CDS JH724260.1 469013 465795 -2 - 3219 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.3830 CDS JH724260.1 470083 469169 -1 - 915 putative anti-sigma factor - none -
fig|6666666.230108.peg.3831 CDS JH724260.1 470742 470146 -3 - 597 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.3832 CDS JH724260.1 470755 470898 1 + 144 hypothetical protein - none -
fig|6666666.230108.peg.3833 CDS JH724260.1 472503 471151 -3 - 1353 putative hexose phosphate transport protein - none -
fig|6666666.230108.peg.3834 CDS JH724260.1 473593 472694 -1 - 900 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.230108.peg.3835 CDS JH724260.1 474969 473614 -3 - 1356 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.3836 CDS JH724260.1 478560 475003 -3 - 3558 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.3837 CDS JH724260.1 479386 479225 -1 - 162 hypothetical protein - none -
fig|6666666.230108.peg.3838 CDS JH724260.1 480747 479767 -3 - 981 putative anti-sigma factor - none -
fig|6666666.230108.peg.3839 CDS JH724260.1 481481 480879 -2 - 603 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.3840 CDS JH724260.1 482887 481616 -1 - 1272 FIG00936879: hypothetical protein - none -
fig|6666666.230108.peg.3841 CDS JH724260.1 483567 482908 -3 - 660 Chloramphenicol acetyltransferase (EC 2.3.1.28) - none -
fig|6666666.230108.peg.3842 CDS JH724260.1 485662 483629 -1 - 2034 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.230108.peg.3843 CDS JH724260.1 485995 485687 -1 - 309 Dabb - none -
fig|6666666.230108.peg.3844 CDS JH724260.1 486098 486709 2 + 612 Uridine kinase (EC 2.7.1.48) - none -
fig|6666666.230108.peg.3845 CDS JH724260.1 486765 488186 3 + 1422 Transglycosylase - none -
fig|6666666.230108.peg.3846 CDS JH724260.1 491071 488306 -1 - 2766 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Methionine Biosynthesis
fig|6666666.230108.peg.3847 CDS JH724260.1 491525 491073 -2 - 453 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.230108.peg.3848 CDS JH724260.1 492106 491534 -1 - 573 FIG00402761: hypothetical protein - none -
fig|6666666.230108.peg.3849 CDS JH724260.1 492983 492114 -2 - 870 hypothetical protein - none -
fig|6666666.230108.peg.3850 CDS JH724260.1 493561 493064 -1 - 498 FIG00939540: hypothetical protein - none -
fig|6666666.230108.peg.3851 CDS JH724260.1 493656 493778 3 + 123 hypothetical protein - none -
fig|6666666.230108.peg.3852 CDS JH724260.1 494006 494707 2 + 702 NifU-related domain containing protein - none -
fig|6666666.230108.peg.3853 CDS JH724260.1 494738 495736 2 + 999 no significant homology. - none -
fig|6666666.230108.peg.3854 CDS JH724260.1 496099 497298 1 + 1200 Tyrosine type site-specific recombinase - none -
fig|6666666.230108.peg.3855 CDS JH724260.1 497379 498221 3 + 843 hypothetical protein - none -
fig|6666666.230108.peg.3856 CDS JH724260.1 498499 499572 1 + 1074 hypothetical protein - none -
fig|6666666.230108.peg.3857 CDS JH724260.1 499778 499951 2 + 174 hypothetical protein - none -
fig|6666666.230108.peg.3858 CDS JH724260.1 499973 500158 2 + 186 hypothetical protein - none -
fig|6666666.230108.peg.3859 CDS JH724260.1 500118 500774 3 + 657 hypothetical protein - none -
fig|6666666.230108.peg.3860 CDS JH724260.1 501243 502262 3 + 1020 hypothetical protein - none -
fig|6666666.230108.peg.3861 CDS JH724260.1 502339 502214 -1 - 126 hypothetical protein - none -
fig|6666666.230108.peg.3862 CDS JH724260.1 502348 502794 1 + 447 DNA repair protein RadC Bacterial cell division cluster;
DNA repair, bacterial
fig|6666666.230108.peg.3863 CDS JH724260.1 502945 503532 1 + 588 Mobile element protein - none -
fig|6666666.230108.peg.3864 CDS JH724260.1 505374 505709 3 + 336 hypothetical protein - none -
fig|6666666.230108.peg.3865 CDS JH724260.1 505797 506216 3 + 420 hypothetical protein - none -
fig|6666666.230108.peg.3866 CDS JH724260.1 506381 506539 2 + 159 hypothetical protein - none -
fig|6666666.230108.peg.3867 CDS JH724260.1 506599 507000 1 + 402 hypothetical protein - none -
fig|6666666.230108.peg.3868 CDS JH724260.1 507200 507343 2 + 144 no significant homology. - none -
fig|6666666.230108.peg.3869 CDS JH724260.1 508440 507403 -3 - 1038 Threonine dehydrogenase and related Zn-dependent dehydrogenases Threonine degradation
fig|6666666.230108.peg.3870 CDS JH724260.1 509265 508468 -3 - 798 putative rRNA methylase - none -
fig|6666666.230108.peg.3871 CDS JH724260.1 512004 509317 -3 - 2688 FIG00898139: hypothetical protein - none -
fig|6666666.230108.peg.3872 CDS JH724260.1 512503 512090 -1 - 414 FIG00405916: hypothetical protein - none -
fig|6666666.230108.peg.3873 CDS JH724260.1 514456 512531 -1 - 1926 Probable outer membrane receptor protein - none -
fig|6666666.230108.peg.3874 CDS JH724260.1 514472 514597 2 + 126 hypothetical protein - none -
fig|6666666.230108.peg.3875 CDS JH724260.1 515505 514594 -3 - 912 FIG00410852: hypothetical protein - none -
fig|6666666.230108.peg.3876 CDS JH724260.1 516180 515572 -3 - 609 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.230108.peg.3877 CDS JH724260.1 516805 516230 -1 - 576 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230108.peg.3878 CDS JH724260.1 517042 517191 1 + 150 hypothetical protein - none -
fig|6666666.230108.peg.3879 CDS JH724260.1 518908 517271 -1 - 1638 FIG00413372: hypothetical protein - none -
fig|6666666.230108.peg.3880 CDS JH724260.1 520054 518921 -1 - 1134 FIG00405618: hypothetical protein - none -
fig|6666666.230108.peg.3881 CDS JH724260.1 521230 520067 -1 - 1164 FIG00407786: hypothetical protein - none -
fig|6666666.230108.peg.3882 CDS JH724260.1 523975 521237 -1 - 2739 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.230108.peg.3883 CDS JH724260.1 524609 523977 -2 - 633 FIG00409790: hypothetical protein - none -
fig|6666666.230108.peg.3884 CDS JH724260.1 525275 524901 -2 - 375 FIG00402998: hypothetical protein - none -
fig|6666666.230108.peg.3885 CDS JH724260.1 526389 525313 -3 - 1077 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.230108.peg.3886 CDS JH724260.1 526726 526451 -1 - 276 conserved hypothetical protein, putative membrane protein - none -
fig|6666666.230108.peg.3887 CDS JH724260.1 526868 526984 2 + 117 hypothetical protein - none -
fig|6666666.230108.peg.3888 CDS JH724260.1 526996 528936 1 + 1941 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.230108.peg.3889 CDS JH724260.1 528942 529376 3 + 435 Zinc uptake regulation protein ZUR Glycyl-tRNA synthetase containing cluster;
Oxidative stress
fig|6666666.230108.peg.3890 CDS JH724260.1 529448 531088 2 + 1641 FIG00409153: hypothetical protein - none -
fig|6666666.230108.peg.3891 CDS JH724260.1 531137 531967 2 + 831 3-demethylubiquinone-9 3-methyltransferase - none -
fig|6666666.230108.peg.3892 CDS JH724260.1 532652 532167 -2 - 486 hypothetical protein - none -
fig|6666666.230108.peg.3893 CDS JH724260.1 534073 536901 1 + 2829 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.3894 CDS JH724260.1 537003 538130 3 + 1128 FIG00411245: hypothetical protein - none -
fig|6666666.230108.peg.3895 CDS JH724260.1 538192 539250 1 + 1059 FIG00405120: hypothetical protein - none -
fig|6666666.230108.peg.3896 CDS JH724260.1 539611 539258 -1 - 354 FIG00405150: hypothetical protein - none -
fig|6666666.230108.peg.3897 CDS JH724260.1 541022 539631 -2 - 1392 Putative oxalate:formate antiporter - none -
fig|6666666.230108.peg.3898 CDS JH724260.1 541165 541046 -1 - 120 hypothetical protein - none -
fig|6666666.230108.peg.3899 CDS JH724260.1 541565 541176 -2 - 390 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915;
Murein hydrolase regulation and cell death
fig|6666666.230108.peg.3900 CDS JH724260.1 542343 541570 -3 - 774 FIG00936113: hypothetical protein - none -
fig|6666666.230108.peg.3901 CDS JH724260.1 542800 542348 -1 - 453 FIG00936439: hypothetical protein - none -
fig|6666666.230108.peg.3902 CDS JH724260.1 544109 542859 -2 - 1251 Transcriptional regulator - none -
fig|6666666.230108.peg.3903 CDS JH724260.1 545208 544111 -3 - 1098 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) ECSIG4-SIG7;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.230108.peg.3904 CDS JH724260.1 546248 545214 -2 - 1035 FIG00936241: hypothetical protein - none -
fig|6666666.230108.peg.3905 CDS JH724260.1 547392 546340 -3 - 1053 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.230108.peg.3906 CDS JH724260.1 547517 547392 -2 - 126 hypothetical protein - none -
fig|6666666.230108.peg.3907 CDS JH724260.1 549672 547534 -3 - 2139 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Queuosine-Archaeosine Biosynthesis
fig|6666666.230108.peg.3908 CDS JH724260.1 551051 549795 -2 - 1257 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.230108.peg.3909 CDS JH724260.1 551616 551056 -3 - 561 FIG00935793: hypothetical protein - none -
fig|6666666.230108.peg.3910 CDS JH724260.1 552994 551687 -1 - 1308 TPR domain protein - none -
fig|6666666.230108.peg.3911 CDS JH724260.1 554177 553059 -2 - 1119 putative outer membrane protein - none -
fig|6666666.230108.peg.3912 CDS JH724260.1 555000 554308 -3 - 693 Pantothenate kinase type III, CoaX-like (EC 2.7.1.33) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.230108.peg.3913 CDS JH724260.1 555170 555054 -2 - 117 hypothetical protein - none -
fig|6666666.230108.peg.3914 CDS JH724260.1 555617 556765 2 + 1149 FIG00937571: hypothetical protein - none -
fig|6666666.230108.peg.3915 CDS JH724260.1 556765 558333 1 + 1569 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.230108.peg.3916 CDS JH724260.1 558431 561766 2 + 3336 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.230108.peg.3917 CDS JH724260.1 561937 563037 1 + 1101 FIG00403450: hypothetical protein - none -
fig|6666666.230108.peg.3918 CDS JH724260.1 563134 563550 1 + 417 FIG00405539: hypothetical protein - none -
fig|6666666.230108.peg.3919 CDS JH724260.1 566659 563657 -1 - 3003 Gluconolactonase (EC 3.1.1.17) Entner-Doudoroff Pathway
fig|6666666.230108.peg.3920 CDS JH724260.1 569706 566689 -3 - 3018 Gluconolactonase (EC 3.1.1.17) Entner-Doudoroff Pathway
fig|6666666.230108.peg.3921 CDS JH724260.1 570554 569853 -2 - 702 FIG00414464: hypothetical protein - none -
fig|6666666.230108.peg.3922 CDS JH724260.1 572488 570593 -1 - 1896 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.3923 CDS JH724260.1 575969 572571 -2 - 3399 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.3924 CDS JH724260.1 576861 576223 -3 - 639 putative anti-sigma factor - none -
fig|6666666.230108.peg.3925 CDS JH724260.1 577229 576858 -2 - 372 putative anti-sigma factor - none -
fig|6666666.230108.peg.3926 CDS JH724260.1 577369 577947 1 + 579 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.3927 CDS JH724260.1 578311 578796 1 + 486 FIG00897771: hypothetical protein - none -
fig|6666666.230108.peg.3928 CDS JH724260.1 578793 579722 3 + 930 FIG00897508: hypothetical protein - none -
fig|6666666.230108.peg.3929 CDS JH724260.1 579728 582148 2 + 2421 glycosyl hydrolase, family 9 - none -
fig|6666666.230108.peg.3930 CDS JH724260.1 584716 582227 -1 - 2490 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.230108.peg.3931 CDS JH724260.1 585062 586108 2 + 1047 FIG00402964: hypothetical protein - none -
fig|6666666.230108.peg.3932 CDS JH724260.1 586120 586941 1 + 822 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.230108.peg.3933 CDS JH724260.1 587580 587071 -3 - 510 FIG00407145: hypothetical protein - none -
fig|6666666.230108.peg.3934 CDS JH724260.1 587935 587570 -1 - 366 FIG00403631: hypothetical protein - none -
fig|6666666.230108.peg.3935 CDS JH724260.1 588537 587983 -3 - 555 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.3936 CDS JH724260.1 589428 588592 -3 - 837 Ribonuclease Z (EC 3.1.26.11) tRNA processing
fig|6666666.230108.peg.3937 CDS JH724260.1 590206 589541 -1 - 666 FIG00412997: hypothetical protein - none -
fig|6666666.230108.peg.3938 CDS JH724260.1 592307 590511 -2 - 1797 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.230108.peg.3939 CDS JH724260.1 592504 593325 1 + 822 Probable lipase (EC 3.1.1.1) - none -
fig|6666666.230108.peg.3940 CDS JH724260.1 594159 593329 -3 - 831 Pantothenate kinase type II, eukaryotic (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.230108.peg.3941 CDS JH724260.1 596591 594327 -2 - 2265 FIG00406556: hypothetical protein - none -
fig|6666666.230108.peg.3942 CDS JH724260.1 597065 599254 2 + 2190 Glutamine synthetase type III, GlnN (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.230108.peg.3943 CDS JH724260.1 599547 600248 3 + 702 transcriptional regulator, Crp/Fnr family Oxidative stress
fig|6666666.230108.peg.3944 CDS JH724260.1 601289 600339 -2 - 951 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.230108.peg.3945 CDS JH724260.1 601977 601327 -3 - 651 FIG00938215: hypothetical protein - none -
fig|6666666.230108.peg.3946 CDS JH724260.1 604485 601981 -3 - 2505 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.230108.peg.3947 CDS JH724260.1 605368 604757 -1 - 612 FIG00416553: hypothetical protein - none -
fig|6666666.230108.peg.3948 CDS JH724260.1 607039 605696 -1 - 1344 FIG00424137: hypothetical protein - none -
fig|6666666.230108.peg.3949 CDS JH724260.1 607467 610286 3 + 2820 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.3950 CDS JH724260.1 610376 612472 2 + 2097 putative helicase - none -
fig|6666666.230108.peg.3951 CDS JH724260.1 612537 613091 3 + 555 FIG00898259: hypothetical protein - none -
fig|6666666.230108.peg.3952 CDS JH724260.1 613095 613718 3 + 624 3@1-5@1 exonuclease domain protein - none -
fig|6666666.230108.peg.3953 CDS JH724260.1 613758 614939 3 + 1182 LSU m5C1962 methyltransferase RlmI RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.230108.peg.3954 CDS JH724260.1 615254 616510 2 + 1257 Nucleoside permease NupG - none -
fig|6666666.230108.peg.3955 CDS JH724260.1 616537 617121 1 + 585 FIG00402727: hypothetical protein - none -
fig|6666666.230108.peg.3956 CDS JH724260.1 617123 617821 2 + 699 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.230108.peg.3957 CDS JH724260.1 617844 619397 3 + 1554 FIG00405862: hypothetical protein - none -
fig|6666666.230108.peg.3958 CDS JH724260.1 619475 620083 2 + 609 ABC transporter ATP-binding protein - none -
fig|6666666.230108.peg.3959 CDS JH724260.1 620095 621300 1 + 1206 FIG00936964: hypothetical protein - none -
fig|6666666.230108.peg.3960 CDS JH724260.1 622593 621379 -3 - 1215 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230108.peg.3961 CDS JH724260.1 624148 622607 -1 - 1542 Beta-xylosidase (EC 3.2.1.37) Xylose utilization
fig|6666666.230108.peg.3962 CDS JH724260.1 624131 624277 2 + 147 hypothetical protein - none -
fig|6666666.230108.peg.3963 CDS JH724260.1 626263 624320 -1 - 1944 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.3964 CDS JH724260.1 627416 626325 -2 - 1092 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.230108.peg.3965 CDS JH724260.1 629318 627417 -2 - 1902 Putative glycosyl hydrolase of unknown function (DUF1680) - none -
fig|6666666.230108.peg.3966 CDS JH724260.1 630934 629339 -1 - 1596 FIG00413299: hypothetical protein - none -
fig|6666666.230108.peg.3967 CDS JH724260.1 631051 631179 1 + 129 hypothetical protein - none -
fig|6666666.230108.peg.3968 CDS JH724260.1 632569 631166 -1 - 1404 COG5434 Endopygalactorunase - none -
fig|6666666.230108.peg.3969 CDS JH724260.1 632699 634156 2 + 1458 COG5434 Endopygalactorunase - none -
fig|6666666.230108.peg.3970 CDS JH724260.1 634655 634146 -2 - 510 FIG00412136: hypothetical protein - none -
fig|6666666.230108.peg.3971 CDS JH724260.1 635136 634672 -3 - 465 FIG00417169: hypothetical protein - none -
fig|6666666.230108.peg.3972 CDS JH724260.1 635717 635586 -2 - 132 hypothetical protein - none -
fig|6666666.230108.peg.3973 CDS JH724260.1 637003 635807 -1 - 1197 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230108.peg.3974 CDS JH724260.1 637176 639581 3 + 2406 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.230108.peg.3975 CDS JH724260.1 639678 641186 3 + 1509 COG5434 Endopygalactorunase - none -
fig|6666666.230108.peg.3976 CDS JH724260.1 641935 641414 -1 - 522 Mobile element protein - none -
fig|6666666.230108.peg.3977 CDS JH724260.1 642240 642127 -3 - 114 Mobile element protein - none -
fig|6666666.230108.peg.3978 CDS JH724260.1 644667 642589 -3 - 2079 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230108.peg.3979 CDS JH724260.1 646973 644982 -2 - 1992 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.3980 CDS JH724260.1 648572 646974 -2 - 1599 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.230108.peg.3981 CDS JH724260.1 650477 648672 -2 - 1806 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.3982 CDS JH724260.1 653623 650537 -1 - 3087 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.3983 CDS JH724260.1 654185 653670 -2 - 516 RNA polymerase ECF-type sigma factor - none -
fig|6666666.230108.peg.3984 CDS JH724260.1 657169 654377 -1 - 2793 DNA-binding response regulator, AraC family - none -
fig|6666666.230108.peg.3985 CDS JH724260.1 660002 657261 -2 - 2742 FIG00408047: hypothetical protein - none -
fig|6666666.230108.peg.3986 CDS JH724260.1 661950 660091 -3 - 1860 Putative transport protein - none -
fig|6666666.230108.peg.3987 CDS JH724260.1 662304 662029 -3 - 276 FIG00413640: hypothetical protein - none -
fig|6666666.230108.peg.3988 CDS JH724260.1 662471 662764 2 + 294 FIG00417535: hypothetical protein - none -
fig|6666666.230108.peg.3989 CDS JH724260.1 663284 662934 -2 - 351 Transcriptional regulator, HxlR family - none -
fig|6666666.230108.peg.3990 CDS JH724260.1 663498 664160 3 + 663 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.230108.peg.3991 CDS JH724260.1 664872 664165 -3 - 708 FIG00415273: hypothetical protein - none -
fig|6666666.230108.peg.3992 CDS JH724260.1 665011 664856 -1 - 156 hypothetical protein - none -
fig|6666666.230108.peg.3993 CDS JH724260.1 665066 665923 2 + 858 Transcriptional regulator, AraC family - none -
fig|6666666.230108.peg.3994 CDS JH724260.1 666266 667162 2 + 897 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.230108.peg.3995 CDS JH724260.1 668167 667169 -1 - 999 putative N-acetylmuramoyl-L-alanine amidase - none -
fig|6666666.230108.peg.3996 CDS JH724260.1 668323 669603 1 + 1281 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Methionine Biosynthesis;
Methionine Biosynthesis
fig|6666666.230108.peg.3997 CDS JH724260.1 672181 669668 -1 - 2514 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.230108.peg.3998 CDS JH724260.1 672348 674636 3 + 2289 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.230108.peg.3999 CDS JH724260.1 675000 676337 3 + 1338 NAD-specific glutamate dehydrogenase (EC 1.4.1.2) / NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.230108.peg.4000 CDS JH724260.1 676527 677741 3 + 1215 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family G3E family of P-loop GTPases (metallocenter biosynthesis)
fig|6666666.230108.peg.4001 CDS JH724260.1 680041 677837 -1 - 2205 Hyaluronidase - none -
fig|6666666.230108.peg.4002 CDS JH724260.1 680740 680162 -1 - 579 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.230108.peg.4003 CDS JH724260.1 680981 680763 -2 - 219 FIG00408312: hypothetical protein - none -
fig|6666666.230108.peg.4004 CDS JH724260.1 681559 680996 -1 - 564 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.230108.peg.4005 CDS JH724260.1 682480 681596 -1 - 885 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.230108.peg.4006 CDS JH724260.1 682572 683264 3 + 693 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE
fig|6666666.230108.peg.4007 CDS JH724260.1 683386 684006 1 + 621 FIG00936255: hypothetical protein - none -
fig|6666666.230108.peg.4008 CDS JH724260.1 684091 685398 1 + 1308 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.230108.peg.4009 CDS JH724260.1 685400 685936 2 + 537 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.230108.peg.4010 CDS JH724260.1 685933 686790 1 + 858 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.230108.peg.4011 CDS JH724260.1 686827 687972 1 + 1146 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.230108.peg.4012 CDS JH724260.1 688085 689416 2 + 1332 Membrane-associated zinc metalloprotease - none -
fig|6666666.230108.peg.4013 CDS JH724260.1 690448 689549 -1 - 900 Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.230108.peg.4014 CDS JH724260.1 690644 691246 2 + 603 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.230108.peg.4015 CDS JH724260.1 691270 692262 1 + 993 FIG00411761: hypothetical protein - none -
fig|6666666.230108.peg.4016 CDS JH724260.1 693748 692465 -1 - 1284 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-)
fig|6666666.230108.peg.4017 CDS JH724260.1 695104 693767 -1 - 1338 NAD-specific glutamate dehydrogenase (EC 1.4.1.2) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230108.peg.4018 CDS JH724260.1 697623 695482 -3 - 2142 Alpha-glucosidase SusB (EC 3.2.1.20) Cellulosome
fig|6666666.230108.peg.4019 CDS JH724260.1 698892 697633 -3 - 1260 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) Cellulosome
fig|6666666.230108.peg.4020 CDS JH724260.1 700459 699281 -1 - 1179 FIG00409457: hypothetical protein - none -
fig|6666666.230108.peg.4021 CDS JH724260.1 702284 700482 -2 - 1803 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.4022 CDS JH724260.1 705229 702308 -1 - 2922 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.4023 CDS JH724260.1 707061 705475 -3 - 1587 Regulatory protein SusR Cellulosome
fig|6666666.230108.peg.4024 CDS JH724260.1 708519 711014 3 + 2496 glycosyl hydrolase, family 9 - none -
fig|6666666.230108.peg.4025 CDS JH724260.1 710966 711853 2 + 888 40-residue YVTN beta-propeller repeat protein - none -
fig|6666666.230108.peg.4026 CDS JH724260.1 714000 712438 -3 - 1563 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.4027 CDS JH724260.1 717111 714022 -3 - 3090 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.230108.peg.4028 CDS JH724260.1 719110 717386 -1 - 1725 Chitinase (EC 3.2.1.14) - none -
fig|6666666.230108.peg.4029 CDS JH724260.1 720391 719126 -1 - 1266 Predicted glucose transporter in maltodextrin utilization gene cluster Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.4030 CDS JH724260.1 721188 720445 -3 - 744 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Sialic Acid Metabolism
fig|6666666.230108.peg.4031 CDS JH724260.1 722140 721199 -1 - 942 Sugar kinase and transcription regulator (EC 2.7.1.-) - none -
fig|6666666.230108.peg.4032 CDS JH724260.1 726203 722271 -2 - 3933 DNA-binding response regulator, AraC family - none -
fig|6666666.230108.peg.4033 CDS JH724260.1 726330 726175 -3 - 156 hypothetical protein - none -
fig|6666666.230108.peg.4034 CDS JH724260.1 726329 729298 2 + 2970 Phosphoenolpyruvate synthase / Pyruvate phosphate dikinase - none -
fig|6666666.230108.peg.4035 CDS JH724260.1 730370 729300 -2 - 1071 hypothetical protein - none -
fig|6666666.230108.peg.4036 CDS JH724260.1 730438 731349 1 + 912 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) - none -
fig|6666666.230108.peg.4037 CDS JH724260.1 732538 731396 -1 - 1143 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) CBSS-296591.1.peg.2330;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230108.peg.4038 CDS JH724260.1 733498 732626 -1 - 873 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.230108.peg.4039 CDS JH724260.1 734357 733863 -2 - 495 FIG00937838: hypothetical protein - none -
fig|6666666.230108.peg.4040 CDS JH724260.1 734449 736515 1 + 2067 Polyphosphate kinase (EC 2.7.4.1) High affinity phosphate transporter and control of PHO regulon;
Phosphate metabolism;
Polyphosphate;
Purine conversions
fig|6666666.230108.peg.4041 CDS JH724260.1 736644 738896 3 + 2253 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.230108.peg.4042 CDS JH724260.1 740370 738940 -3 - 1431 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.230108.peg.4043 CDS JH724260.1 740500 741330 1 + 831 FIG00414501: hypothetical protein - none -
fig|6666666.230108.peg.4044 CDS JH724260.1 741800 741399 -2 - 402 Two-component system sensor histidine kinase - none -
fig|6666666.230108.peg.4045 CDS JH724260.1 741887 743521 2 + 1635 ABC transporter ATP-binding protein uup - none -
fig|6666666.230108.peg.4046 CDS JH724260.1 743605 744981 1 + 1377 Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4); Mercuric ion reductase (EC 1.16.1.1); PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase Mercuric reductase;
Mercuric reductase;
Mercury resistance operon;
TCA Cycle
fig|6666666.230108.peg.4047 CDS JH724260.1 745020 745454 3 + 435 FIG00403272: hypothetical protein - none -
fig|6666666.230108.peg.4048 CDS JH724260.1 745574 746794 2 + 1221 Cation efflux system protein - none -
fig|6666666.230108.peg.4049 CDS JH724260.1 746963 750085 2 + 3123 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA Cobalt-zinc-cadmium resistance;
Cobalt-zinc-cadmium resistance
fig|6666666.230108.peg.4050 CDS JH724260.1 750078 751304 3 + 1227 FIG00406501: hypothetical protein - none -
fig|6666666.230108.peg.4051 CDS JH724260.1 752593 751361 -1 - 1233 proteinase inhibitor I4, serpin - none -
fig|6666666.230108.peg.4052 CDS JH724260.1 754328 752871 -2 - 1458 tRNA and rRNA cytosine-C5-methylases - none -
fig|6666666.230108.peg.4053 CDS JH724260.1 756842 754419 -2 - 2424 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.230108.peg.4054 CDS JH724260.1 757230 756907 -3 - 324 FIG00410804: hypothetical protein - none -
fig|6666666.230108.peg.4055 CDS JH724260.1 757504 758127 1 + 624 FIG00403458: hypothetical protein - none -
fig|6666666.230108.peg.4056 CDS JH724260.1 758124 758669 3 + 546 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.230108.peg.4057 CDS JH724260.1 758659 758982 1 + 324 FIG00403275: hypothetical protein - none -
fig|6666666.230108.peg.4058 CDS JH724260.1 759045 760274 3 + 1230 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230108.peg.4059 CDS JH724260.1 760347 761141 3 + 795 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis
fig|6666666.230108.peg.4060 CDS JH724260.1 762370 762858 1 + 489 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.230108.peg.4061 CDS JH724260.1 763337 762861 -2 - 477 Transcriptional regulator, AsnC family - none -
fig|6666666.230108.peg.4062 CDS JH724260.1 763578 764855 3 + 1278 Peptidase M64 - none -
fig|6666666.230108.peg.4063 CDS JH724260.1 764880 765416 3 + 537 FIG00897901: hypothetical protein - none -
fig|6666666.230108.peg.4064 CDS JH724260.1 765956 765492 -2 - 465 FIG00935740: hypothetical protein - none -
fig|6666666.230108.peg.4065 CDS JH724260.1 766546 765956 -1 - 591 Biopolymer transport exbD protein. - none -
fig|6666666.230108.peg.4066 CDS JH724260.1 767067 766582 -3 - 486 FIG00404263: hypothetical protein - none -
fig|6666666.230108.peg.4067 CDS JH724260.1 767876 767073 -2 - 804 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.230108.peg.4068 CDS JH724260.1 768983 768204 -2 - 780 Putative deoxyribonuclease YcfH YcfH
fig|6666666.230108.peg.4069 CDS JH724260.1 769609 768992 -1 - 618 FIG00403149: hypothetical protein - none -
fig|6666666.230108.peg.4070 CDS JH724260.1 770752 769712 -1 - 1041 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoinds for Quinones
fig|6666666.230108.peg.4071 CDS JH724260.1 771453 770767 -3 - 687 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.230108.peg.4072 CDS JH724260.1 771473 772411 2 + 939 Cytidylate kinase (EC 2.7.4.25) - none -
fig|6666666.230108.peg.4073 CDS JH724260.1 772419 773285 3 + 867 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.230108.peg.4074 CDS JH724260.1 773425 774405 1 + 981 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.230108.peg.4075 CDS JH724260.1 775269 774466 -3 - 804 retinol dehydrogenase 13 (all-trans and 9-cis) - none -
fig|6666666.230108.peg.4076 CDS JH724260.1 776454 775342 -3 - 1113 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - none -
fig|6666666.230108.peg.4077 CDS JH724260.1 777401 776631 -2 - 771 3-oxo-5-alpha-steroid 4-dehydrogenase - none -
fig|6666666.230108.peg.4078 CDS JH724260.1 777414 777536 3 + 123 hypothetical protein - none -
fig|6666666.230108.peg.4079 CDS JH724260.1 778991 777648 -2 - 1344 Citrate synthase (si) (EC 2.3.3.1) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.230108.peg.4080 CDS JH724260.1 780164 779004 -2 - 1161 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 5-FCL-like protein;
TCA Cycle
fig|6666666.230108.peg.4081 CDS JH724260.1 782411 780168 -2 - 2244 Aconitate hydratase (EC 4.2.1.3) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.230108.peg.4082 CDS JH724260.1 782526 784439 3 + 1914 putative helicase - none -
fig|6666666.230108.peg.4083 CDS JH724260.1 785544 784501 -3 - 1044 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.230108.peg.4084 CDS JH724260.1 786347 785595 -2 - 753 Acyl-ACP thioesterase - none -
fig|6666666.230108.peg.4085 CDS JH724260.1 786904 786344 -1 - 561 Acetolactate synthase small subunit (EC 2.2.1.6) Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.230108.peg.4086 CDS JH724260.1 788688 786937 -3 - 1752 Acetolactate synthase large subunit (EC 2.2.1.6) Acetolactate synthase subunits;
Branched-Chain Amino Acid Biosynthesis
fig|6666666.230108.peg.4087 CDS JH724260.1 790618 788780 -1 - 1839 Dihydroxy-acid dehydratase (EC 4.2.1.9) Branched-Chain Amino Acid Biosynthesis
fig|6666666.230108.peg.4088 CDS JH724260.1 791073 791645 3 + 573 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.230108.peg.4089 CDS JH724260.1 793030 791753 -1 - 1278 Putative inner membrane protein - none -
fig|6666666.230108.peg.4090 CDS JH724260.1 794343 793150 -3 - 1194 FIG00405746: hypothetical protein - none -
fig|6666666.230108.peg.4091 CDS JH724260.1 794738 795814 2 + 1077 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.230108.peg.4092 CDS JH724260.1 795824 797179 2 + 1356 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.230108.peg.4093 CDS JH724260.1 797195 798274 2 + 1080 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.230108.peg.4094 CDS JH724260.1 798289 798843 1 + 555 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.230108.peg.4095 CDS JH724260.1 801044 798855 -2 - 2190 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.230108.peg.4096 CDS JH724260.1 803505 801358 -3 - 2148 Methylmalonyl-CoA mutase (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis);
Propionyl-CoA to Succinyl-CoA Module;
Serine-glyoxylate cycle
fig|6666666.230108.peg.4097 CDS JH724260.1 805450 803552 -1 - 1899 Methylmalonyl-CoA mutase (EC 5.4.99.2) G3E family of P-loop GTPases (metallocenter biosynthesis);
Propionyl-CoA to Succinyl-CoA Module;
Serine-glyoxylate cycle
fig|6666666.230108.peg.4098 CDS JH724260.1 805799 807382 2 + 1584 putative membrane protein - none -
fig|6666666.230108.peg.4099 CDS JH724260.1 808100 807459 -2 - 642 Cytidylate kinase (EC 2.7.4.25) - none -
fig|6666666.230108.peg.4100 CDS JH724260.1 809545 808193 -1 - 1353 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.230108.peg.4101 CDS JH724260.1 809803 810210 1 + 408 putative non-specific DNA binding protein - none -
fig|6666666.230108.peg.4102 CDS JH724260.1 810305 812035 2 + 1731 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.230108.peg.4103 CDS JH724260.1 812134 813129 1 + 996 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.230108.peg.4104 CDS JH724260.1 813178 814515 1 + 1338 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.230108.peg.4105 CDS JH724260.1 814534 815400 1 + 867 Beta-phosphoglucomutase (EC 5.4.2.6) Maltose and Maltodextrin Utilization;
Trehalose Uptake and Utilization
fig|6666666.230108.peg.4106 CDS JH724260.1 816172 815540 -1 - 633 FIG00936531: hypothetical protein - none -
fig|6666666.230108.peg.4107 CDS JH724260.1 816384 816806 3 + 423 FIG00638667: hypothetical protein - none -
fig|6666666.230108.peg.4108 CDS JH724260.1 818109 817228 -3 - 882 FIG00406423: hypothetical protein - none -
fig|6666666.230108.peg.4109 CDS JH724260.1 819060 818218 -3 - 843 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.230108.peg.4110 CDS JH724260.1 819612 819139 -3 - 474 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
CBSS-315749.4.peg.3658
fig|6666666.230108.peg.4111 CDS JH724260.1 820170 819619 -3 - 552 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase
fig|6666666.230108.peg.4112 CDS JH724260.1 820667 821704 2 + 1038 Aspartate--ammonia ligase (EC 6.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.230108.peg.4113 CDS JH724260.1 821809 822471 1 + 663 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.230108.peg.4114 CDS JH724260.1 825096 822475 -3 - 2622 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor ECSIG4-SIG7
fig|6666666.230108.peg.4115 CDS JH724260.1 825868 825332 -1 - 537 HDIG domain protein - none -
fig|6666666.230108.peg.4116 CDS JH724260.1 827622 825889 -3 - 1734 Polymyxin resistance protein ArnT, undecaprenyl phosphate-alpha-L-Ara4N transferase; Melittin resistance protein PqaB - none -
fig|6666666.230108.peg.4117 CDS JH724260.1 827810 828187 2 + 378 FIG00407687: hypothetical protein - none -
fig|6666666.230108.peg.4118 CDS JH724260.1 828239 829210 2 + 972 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230108.peg.4119 CDS JH724260.1 829650 829856 3 + 207 hypothetical protein - none -
fig|6666666.230108.peg.4120 CDS JH724260.1 829957 829838 -1 - 120 hypothetical protein - none -
fig|6666666.230108.peg.4121 CDS JH724260.1 830074 830595 1 + 522 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.230108.peg.4122 CDS JH724260.1 830592 830948 3 + 357 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.230108.peg.4123 CDS JH724260.1 830983 831564 1 + 582 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases CBSS-258594.1.peg.3339;
cAMP signaling in bacteria
fig|6666666.230108.peg.4124 CDS JH724260.1 831732 831983 3 + 252 hypothetical protein - none -
fig|6666666.230108.peg.4125 CDS JH724260.1 832084 832221 1 + 138 hypothetical protein - none -
fig|6666666.230108.peg.4126 CDS JH724260.1 833335 832232 -1 - 1104 FIG074102: hypothetical protein - none -
fig|6666666.230108.peg.4127 CDS JH724260.1 834234 833434 -3 - 801 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.230108.peg.4128 CDS JH724260.1 835120 834266 -1 - 855 Methyltransferase type 12 - none -
fig|6666666.230108.peg.4129 CDS JH724260.1 836447 835164 -2 - 1284 Mobilization protein BmpH - none -
fig|6666666.230108.peg.4130 CDS JH724260.1 836412 836624 3 + 213 hypothetical protein - none -
fig|6666666.230108.peg.4131 CDS JH724260.1 837685 836717 -1 - 969 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.230108.peg.4132 CDS JH724260.1 838898 837834 -2 - 1065 FIG00898246: hypothetical protein - none -
fig|6666666.230108.peg.4133 CDS JH724260.1 839145 838903 -3 - 243 putative excisionase - none -
fig|6666666.230108.peg.4134 CDS JH724260.1 840251 839322 -2 - 930 FIG00897538: hypothetical protein - none -
fig|6666666.230108.peg.4135 CDS JH724260.1 841553 840360 -2 - 1194 Phage integrase precursor - none -
fig|6666666.230108.peg.4136 CDS JH724260.1 842689 841736 -1 - 954 putative sodium-dependent transporter - none -
fig|6666666.230108.peg.4137 CDS JH724260.1 843031 844125 1 + 1095 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.230108.peg.4138 CDS JH724260.1 844139 845032 2 + 894 Mce4/Rv3499c/MTV023.06c protein - none -
fig|6666666.230108.peg.4139 CDS JH724260.1 845384 846769 2 + 1386 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.230108.peg.4140 CDS JH724260.1 847623 846841 -3 - 783 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.230108.peg.4141 CDS JH724260.1 847993 850530 1 + 2538 Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.230108.peg.4142 CDS JH724260.1 850662 853355 3 + 2694 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.230108.peg.4143 CDS JH724260.1 853579 853995 1 + 417 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.230108.peg.4144 CDS JH724260.1 855167 854649 -2 - 519 Methylglyoxal synthase (EC 4.2.3.3) Methylglyoxal Metabolism
fig|6666666.230108.peg.4145 CDS JH724260.1 856231 855215 -1 - 1017 Glycosyltransferase CBSS-258594.1.peg.3339
fig|6666666.230108.peg.4146 CDS JH724260.1 857123 856224 -2 - 900 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) - none -
fig|6666666.230108.peg.4147 CDS JH724260.1 858508 857192 -1 - 1317 tRNA-t(6)A37 methylthiotransferase Heat shock dnaK gene cluster extended;
Methylthiotransferases
fig|6666666.230108.peg.4148 CDS JH724260.1 858594 860267 3 + 1674 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.230108.peg.4149 CDS JH724260.1 860398 860637 1 + 240 FIG00405659: hypothetical protein - none -
fig|6666666.230108.peg.4150 CDS JH724260.1 861031 861216 1 + 186 RNA binding protein - none -
fig|6666666.230108.peg.4151 CDS JH724260.1 861943 861494 -1 - 450 LSU ribosomal protein L9p - none -
fig|6666666.230108.peg.4152 CDS JH724260.1 862231 861959 -1 - 273 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.230108.peg.4153 CDS JH724260.1 862578 862234 -3 - 345 SSU ribosomal protein S6p Ribosome SSU bacterial
fig|6666666.230108.peg.4154 CDS JH724260.1 862738 863184 1 + 447 Transcriptional regulator, MarR family - none -
fig|6666666.230108.peg.4155 CDS JH724260.1 863385 863561 3 + 177 FIG00407300: hypothetical protein - none -
fig|6666666.230108.peg.4156 CDS JH724260.1 864352 863651 -1 - 702 Transcriptional regulatory protein rprY - none -
fig|6666666.230108.peg.4157 CDS JH724260.1 865866 864358 -3 - 1509 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.230108.peg.4158 CDS JH724260.1 868359 866203 -3 - 2157 Translation elongation factor G-related protein Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.230108.peg.4159 CDS JH724260.1 868748 870379 2 + 1632 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.230108.peg.4160 CDS JH724260.1 870527 873847 2 + 3321 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.230108.peg.4161 CDS JH724260.1 875143 873962 -1 - 1182 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.230108.peg.4162 CDS JH724260.1 875306 875878 2 + 573 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.230108.peg.4163 CDS JH724260.1 876989 875838 -2 - 1152 Beta-glucanase - none -
fig|6666666.230108.peg.4164 CDS JH724260.1 879145 877088 -1 - 2058 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.230108.peg.4165 CDS JH724260.1 882471 879169 -3 - 3303 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.230108.peg.4166 CDS JH724260.1 886687 882614 -1 - 4074 DNA-binding response regulator, AraC family - none -
fig|6666666.230108.peg.4167 CDS JH724260.1 887020 887460 1 + 441 hypothetical protein - none -
fig|6666666.230108.peg.4168 CDS JH724260.1 888033 890126 3 + 2094 putative helicase - none -
fig|6666666.230108.peg.4169 CDS JH724260.1 891343 890123 -1 - 1221 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.230108.peg.4170 CDS JH724261.1 432 881 3 + 450 FIG00410894: hypothetical protein - none -
fig|6666666.230108.peg.4171 CDS JH724261.1 878 1357 2 + 480 FIG00408654: hypothetical protein - none -
fig|6666666.230108.peg.4172 CDS JH724261.1 1391 1639 2 + 249 FIG00404086: hypothetical protein - none -
fig|6666666.230108.peg.4173 CDS JH724261.1 1626 2492 3 + 867 Zeta toxin - none -
fig|6666666.230108.peg.4174 CDS JH724261.1 3190 2543 -1 - 648 Cell wall endopeptidase, family M23/M37 - none -
fig|6666666.230108.peg.4175 CDS JH724261.1 3189 3968 3 + 780 FIG00405317: hypothetical protein - none -
fig|6666666.230108.peg.4176 CDS JH724261.1 3970 5529 1 + 1560 FIG00408957: hypothetical protein - none -
fig|6666666.230108.peg.4177 CDS JH724261.1 5534 6643 2 + 1110 FIG00404083: hypothetical protein - none -
fig|6666666.230108.peg.4178 CDS JH724261.1 7124 7831 2 + 708 hypothetical protein - none -
fig|6666666.230108.peg.4179 CDS JH724261.1 7892 8668 2 + 777 DNA topoisomerase III domain DNA topoisomerases, Type I, ATP-independent
fig|6666666.230108.peg.4180 CDS JH724261.1 8785 9018 1 + 234 hypothetical protein - none -
fig|6666666.230108.peg.4181 CDS JH724261.1 9030 9308 3 + 279 Integration host factor alpha subunit DNA structural proteins, bacterial
fig|6666666.230108.peg.4182 CDS JH724261.1 9624 10025 3 + 402 hypothetical protein - none -
fig|6666666.230108.peg.4183 CDS JH724261.1 10468 12384 1 + 1917 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.4184 CDS JH724261.1 12539 12763 2 + 225 putative phage related transcriptional regulator - none -
fig|6666666.230108.peg.4185 CDS JH724261.1 13590 13195 -3 - 396 hypothetical protein - none -
fig|6666666.230108.peg.4186 CDS JH724261.1 15346 13667 -1 - 1680 FIG00410753: hypothetical protein - none -
fig|6666666.230108.peg.4187 CDS JH724261.1 16678 15356 -1 - 1323 hypothetical protein - none -
fig|6666666.230108.peg.4188 CDS JH724261.1 17888 16890 -2 - 999 hypothetical protein - none -
fig|6666666.230108.peg.4189 CDS JH724261.1 18057 19292 3 + 1236 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) Glycine Biosynthesis;
Glycine and Serine Utilization
fig|6666666.230108.peg.4190 CDS JH724261.1 19295 20017 2 + 723 Putative transcriptional regulator - none -
fig|6666666.230108.peg.4191 CDS JH724262.1 67 387 1 + 321 FIG00761799: membrane protein - none -
fig|6666666.230108.peg.4192 CDS JH724262.1 1028 3868 2 + 2841 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.4193 CDS JH724262.1 3966 4553 3 + 588 hypothetical protein - none -
fig|6666666.230108.peg.4194 CDS JH724262.1 4555 5211 1 + 657 FIG00404931: hypothetical protein - none -
fig|6666666.230108.peg.4195 CDS JH724262.1 5204 6226 2 + 1023 Conjugative transposon protein TraJ Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.4196 CDS JH724262.1 6541 6873 1 + 333 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.4197 CDS JH724262.1 6873 7304 3 + 432 FIG00761799: membrane protein - none -
fig|6666666.230108.peg.4198 CDS JH724262.1 7308 8417 3 + 1110 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.4199 CDS JH724262.1 8419 9258 1 + 840 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.4200 CDS JH724262.1 9777 10436 3 + 660 FIG00408725: hypothetical protein - none -
fig|6666666.230108.peg.4201 CDS JH724262.1 10439 11080 2 + 642 putative outer membrane protein - none -
fig|6666666.230108.peg.4202 CDS JH724263.1 170 421 2 + 252 putative DNA-binding protein - none -
fig|6666666.230108.peg.4203 CDS JH724263.1 1475 1708 2 + 234 hypothetical protein - none -
fig|6666666.230108.peg.4204 CDS JH724263.1 1732 2025 1 + 294 hypothetical protein - none -
fig|6666666.230108.peg.4205 CDS JH724263.1 2086 2307 1 + 222 hypothetical protein - none -
fig|6666666.230108.peg.4206 CDS JH724263.1 2332 2643 1 + 312 FIG00413905: hypothetical protein - none -
fig|6666666.230108.peg.4207 CDS JH724263.1 2705 3160 2 + 456 hypothetical protein - none -
fig|6666666.230108.peg.4208 CDS JH724263.1 3525 4682 3 + 1158 Phage replication protein Phage replication
fig|6666666.230108.peg.4209 CDS JH724264.1 1133 510 -2 - 624 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.230108.peg.4210 CDS JH724264.1 2772 1153 -3 - 1620 putative mobilization protein - none -
fig|6666666.230108.peg.4211 CDS JH724265.1 90 1100 3 + 1011 DNA primase TraC - none -
fig|6666666.230108.peg.4212 CDS JH724266.1 5 700 2 + 696 Rhs family protein - none -
fig|6666666.230108.rna.1 RNA JH724260.1 1084059 1083985 -3 - 75 tRNA-Val-TAC - none -
fig|6666666.230108.rna.2 RNA JH724260.1 1084165 1084091 -1 - 75 tRNA-Val-TAC - none -
fig|6666666.230108.rna.3 RNA JH724260.1 1115294 1115185 -2 - 110 5S RNA - none -
fig|6666666.230108.rna.4 RNA JH724260.1 1118238 1115418 -3 - 2821 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.230108.rna.5 RNA JH724260.1 1118433 1118360 -3 - 74 tRNA-Ala-TGC - none -
fig|6666666.230108.rna.6 RNA JH724260.1 1118597 1118524 -2 - 74 tRNA-Ile-GAT - none -
fig|6666666.230108.rna.7 RNA JH724260.1 1120265 1118731 -2 - 1535 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.230108.rna.8 RNA JH724260.1 1186222 1186147 -1 - 76 tRNA-Trp-CCA tRNAs
fig|6666666.230108.rna.9 RNA JH724260.1 1187585 1187514 -2 - 72 tRNA-Thr-GGT - none -
fig|6666666.230108.rna.10 RNA JH724260.1 1187685 1187600 -3 - 86 tRNA-Tyr-GTA - none -
fig|6666666.230108.rna.11 RNA JH724260.1 1187883 1187810 -3 - 74 tRNA-Thr-TGT - none -
fig|6666666.230108.rna.12 RNA JH724260.1 1293346 1293260 -1 - 87 tRNA-Leu-CAA tRNAs
fig|6666666.230108.rna.13 RNA JH724260.1 1735902 1735975 3 + 74 tRNA-Gln-TTG - none -
fig|6666666.230108.rna.14 RNA JH724260.1 1903251 1903175 -3 - 77 tRNA-Met-CAT - none -
fig|6666666.230108.rna.15 RNA JH724260.1 1963506 1963577 3 + 72 tRNA-Arg-CCT - none -
fig|6666666.230108.rna.16 RNA JH724260.1 2031516 2031440 -3 - 77 tRNA-Asn-GTT - none -
fig|6666666.230108.rna.17 RNA JH724260.1 2109980 2109906 -2 - 75 tRNA-Glu-TTC - none -
fig|6666666.230108.rna.18 RNA JH724260.1 2180505 2180424 -3 - 82 tRNA-Leu-TAG - none -
fig|6666666.230108.rna.19 RNA JH724260.1 2333397 2333469 3 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.230108.rna.20 RNA JH724260.1 2333490 2333573 3 + 84 tRNA-Leu-TAA - none -
fig|6666666.230108.rna.21 RNA JH724260.1 2365800 2365728 -3 - 73 tRNA-Pro-CGG tRNAs
fig|6666666.230108.rna.22 RNA JH724260.1 2365888 2365816 -1 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.230108.rna.23 RNA JH724260.1 2452977 2452901 -3 - 77 tRNA-Met-CAT - none -
fig|6666666.230108.rna.24 RNA JH724260.1 2476247 2477781 2 + 1535 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.230108.rna.25 RNA JH724260.1 2477915 2477988 2 + 74 tRNA-Ile-GAT - none -
fig|6666666.230108.rna.26 RNA JH724260.1 2478079 2478152 1 + 74 tRNA-Ala-TGC - none -
fig|6666666.230108.rna.27 RNA JH724260.1 2478274 2481094 1 + 2821 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.230108.rna.28 RNA JH724260.1 2481218 2481327 2 + 110 5S RNA - none -
fig|6666666.230108.rna.29 RNA JH724260.1 2493992 2493917 -2 - 76 tRNA-Met-CAT - none -
fig|6666666.230108.rna.30 RNA JH724260.1 2608206 2608131 -3 - 76 tRNA-Lys-TTT - none -
fig|6666666.230108.rna.31 RNA JH724260.1 2724082 2724009 -1 - 74 tRNA-Pro-GGG tRNAs
fig|6666666.230108.rna.32 RNA JH724260.1 2762356 2762429 1 + 74 tRNA-Gln-CTG - none -
fig|6666666.230108.rna.33 RNA JH724260.1 2985679 2985607 -1 - 73 tRNA-Gly-TCC - none -
fig|6666666.230108.rna.34 RNA JH724260.1 2985771 2985686 -3 - 86 tRNA-Tyr-GTA - none -
fig|6666666.230108.rna.35 RNA JH724260.1 3163219 3163144 -1 - 76 tRNA-Phe-GAA tRNAs
fig|6666666.230108.rna.36 RNA JH724260.1 3169346 3170880 2 + 1535 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.230108.rna.37 RNA JH724260.1 3171014 3171087 2 + 74 tRNA-Ile-GAT - none -
fig|6666666.230108.rna.38 RNA JH724260.1 3171178 3171251 1 + 74 tRNA-Ala-TGC - none -
fig|6666666.230108.rna.39 RNA JH724260.1 3171373 3174193 1 + 2821 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.230108.rna.40 RNA JH724260.1 3174317 3174426 2 + 110 5S RNA - none -
fig|6666666.230108.rna.41 RNA JH724260.1 3377067 3376991 -3 - 77 tRNA-Ala-GGC tRNAs
fig|6666666.230108.rna.42 RNA JH724260.1 3407108 3407036 -2 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.230108.rna.43 RNA JH724260.1 3464819 3464743 -2 - 77 tRNA-Thr-TGT - none -
fig|6666666.230108.rna.44 RNA JH724260.1 3661742 3661667 -2 - 76 tRNA-Thr-CGT - none -
fig|6666666.230108.rna.45 RNA JH724260.1 3819034 3819123 1 + 90 tRNA-Ser-GCT - none -
fig|6666666.230108.rna.46 RNA JH724260.1 3819127 3819202 1 + 76 tRNA-Lys-CTT - none -
fig|6666666.230108.rna.47 RNA JH724260.1 3819215 3819289 2 + 75 tRNA-Glu-CTC - none -
fig|6666666.230108.rna.48 RNA JH724260.1 3866689 3866617 -1 - 73 tRNA-Lys-TTT - none -
fig|6666666.230108.rna.49 RNA JH724260.1 4043774 4043849 2 + 76 tRNA-Gly-GCC tRNAs
fig|6666666.230108.rna.50 RNA JH724260.1 4043875 4043959 1 + 85 tRNA-Leu-CAG tRNAs
fig|6666666.230108.rna.51 RNA JH724260.1 4044000 4044083 3 + 84 tRNA-Leu-GAG tRNAs
fig|6666666.230108.rna.52 RNA JH724260.1 4044098 4044170 2 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.230108.rna.53 RNA JH724260.1 4044198 4044279 3 + 82 tRNA-Leu-CAG tRNAs
fig|6666666.230108.rna.54 RNA JH724260.1 4044312 4044384 3 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.230108.rna.55 RNA JH724260.1 4056143 4056219 2 + 77 tRNA-Asp-GTC - none -
fig|6666666.230108.rna.56 RNA JH724260.1 4349885 4349957 2 + 73 tRNA-Gly-CCC tRNAs
fig|6666666.230108.rna.57 RNA JH724260.1 4443642 4443718 3 + 77 tRNA-Arg-TCT - none -
fig|6666666.230108.rna.58 RNA JH724260.1 196611 196687 3 + 77 tRNA-Asp-GTC - none -
fig|6666666.230108.rna.59 RNA JH724260.1 245990 245916 -2 - 75 tRNA-Cys-GCA tRNAs
fig|6666666.230108.rna.60 RNA JH724260.1 258782 258855 2 + 74 tRNA-His-GTG - none -
fig|6666666.230108.rna.61 RNA JH724260.1 267831 267747 -3 - 85 tRNA-Ser-TGA - none -
fig|6666666.230108.rna.62 RNA JH724260.1 4551042 4550970 -3 - 73 tRNA-Lys-CTT - none -
fig|6666666.230108.rna.63 RNA JH724260.1 4574190 4574264 3 + 75 tRNA-Pro-TGG - none -
fig|6666666.230108.rna.64 RNA JH724260.1 4633286 4633210 -2 - 77 tRNA-Arg-ACG tRNAs
fig|6666666.230108.rna.65 RNA JH724260.1 4633509 4633433 -3 - 77 tRNA-Arg-ACG tRNAs
fig|6666666.230108.rna.66 RNA JH724260.1 4848262 4848153 -1 - 110 5S RNA - none -
fig|6666666.230108.rna.67 RNA JH724260.1 4851206 4848386 -2 - 2821 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.230108.rna.68 RNA JH724260.1 4851401 4851328 -2 - 74 tRNA-Ala-TGC - none -
fig|6666666.230108.rna.69 RNA JH724260.1 4851565 4851492 -1 - 74 tRNA-Ile-GAT - none -
fig|6666666.230108.rna.70 RNA JH724260.1 4853233 4851699 -1 - 1535 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.230108.rna.71 RNA JH724260.1 283619 283529 -2 - 91 tRNA-Ser-GGA tRNAs
fig|6666666.230108.rna.72 RNA JH724260.1 393827 393743 -2 - 85 tRNA-Ser-TGA - none -
fig|6666666.230108.rna.73 RNA JH724260.1 768041 767954 -2 - 88 tRNA-Ser-GGA tRNAs
fig|6666666.230108.rna.74 RNA JH724260.1 820454 820379 -2 - 76 tRNA-Arg-CCG tRNAs