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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

BAKTAGenome Explorer: Limosilactobacillus fermentum (GCA_000159215.1)

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BAKTA Annotations for GCA_000159215.1
Genome Selected: Limosilactobacillus fermentum
ContigsBases CDSrRNA tmRNAtRNA
74 1867005 1740 3 1 56
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Annotation Table [page:8]    |    Number of Records Found: 3631 [8 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 BAKTA
Gene		 BAKTA
GeneProduct
3501 GG669911.1 GCA000159215_00057 gene open 17040-17717
3502 GG669911.1 GCA000159215_00058 gene open 17721-18596
3503 GG669911.1 GCA000159215_00059 gene open 18913-20250
3504 GG669911.1 GCA000159215_00060 gene open 20314-20928
3505 GG669911.1 GCA000159215_00061 gene open 20956-21642 rpiA
3506 GG669911.1 GCA000159215_00062 gene open 21654-21965
3507 GG669911.1 GCA000159215_00063 gene open 22165-22704
3508 GG669911.1 GCA000159215_00064 gene open 22717-24090 radA
3509 GG669911.1 GCA000159215_00065 gene open 24123-25256 yacL
3510 GG669911.1 GCA000159215_00066 gene open 25327-26823 gltX
3511 GG669911.1 GCA000159215_00067 gene open 26891-27460
3512 GG669911.1 GCA000159215_00068 gene open 27808-29226 cysS
3513 GG669911.1 GCA000159215_00069 gene open 29233-29646
3514 GG669911.1 GCA000159215_00070 gene open 29636-30391 rlmB
3515 GG669911.1 GCA000159215_00071 gene open 30630-31208
3516 GG669911.1 GCA000159215_00072 gene open 31273-31419 rpmG
3517 GG669911.1 GCA000159215_00073 gene open 31434-31610 secE
3518 GG669911.1 GCA000159215_00074 gene open 31719-32264 nusG
3519 GG669911.1 GCA000159215_00075 gene open 32489-32809 rplK
3520 GG669911.1 GCA000159215_00076 gene open 32903-33595 rplA
3521 GG669911.1 GCA000159215_00077 gene open 34723-36051
3522 GG669911.1 GCA000159215_00078 gene open 36428-36931 rplJ
3523 GG669911.1 GCA000159215_00079 gene open 37000-37365 rplL
3524 GG669911.1 GCA000159215_00080 gene open 37810-39246
3525 GG669911.1 GCA000159215_00081 gene open 39248-40264 cydB
3526 GG669911.1 GCA000159215_00082 gene open 40264-41994 cydD
3527 GG669911.1 GCA000159215_00083 gene open 41984-43735 cydC
3528 GG669911.1 GCA000159215_00084 gene open 44214-46817 adhE
3529 GG669911.1 GCA000159215_00085 gene open 47344-48723 brnQ
3530 GG669911.1 GCA000159215_00086 gene open 48798-49799 nrdF
3531 GG669911.1 GCA000159215_00087 gene open 49861-52032 nrdE
3532 GG669911.1 GCA000159215_00088 gene open 52132-52353 nrdH
3533 GG669911.1 GCA000159215_00089 gene open 52610-53134 tadA
3534 GG669911.1 GCA000159215_00090 gene open 53128-53286
3535 GG669911.1 GCA000159215_00092 gene open 53390-55081 dnaX
3536 GG669911.1 GCA000159215_00093 gene open 55104-55412
3537 GG669911.1 GCA000159215_00094 gene open 55428-56027 recR
3538 GG669911.1 GCA000159215_00095 gene open 56029-56277
3539 GG669911.1 GCA000159215_00096 gene open 56297-56941 tmk
3540 GG669911.1 GCA000159215_00097 gene open 56954-57274
3541 GG669911.1 GCA000159215_00098 gene open 57292-58332 holB
3542 GG669911.1 GCA000159215_00099 gene open 58325-58660 yabA
3543 GG669911.1 GCA000159215_00100 gene open 58663-59523 rsmI
3544 GG669911.1 GCA000159215_00101 gene open 59543-60298
3545 GG669911.1 GCA000159215_00102 gene open 60427-61929
3546 GG669911.1 GCA000159215_00044 gene open 5060-5142 trnY
3547 GG669911.1 GCA000159215_00045 gene open 5152-5223 trnQ
3548 GG669911.1 GCA000159215_00053 gene open 12591-12675 trnL
3549 GG669911.1 GCA000159215_00044 tRNA open 5060-5142 trnY tRNA-Tyr(gta)
3550 GG669911.1 GCA000159215_00045 tRNA open 5152-5223 trnQ tRNA-Gln(ttg)
3551 GG669911.1 GCA000159215_00053 tRNA open 12591-12675 trnL tRNA-Leu(aag)
3552 GG669912.1 GCA000159215_00034 CDS open 176-1399 _na     407_aa arcA arginine deiminase
3553 GG669912.1 GCA000159215_00035 CDS open 1460-2389 _na     309_aa arcC carbamate kinase
3554 GG669912.1 GCA000159215_00036 CDS open 2405-3406 _na     333_aa argF ornithine carbamoyltransferase
3555 GG669912.1 GCA000159215_00037 CDS open 3895-4746 _na     283_aa Two-component response regulator
3556 GG669912.1 GCA000159215_00038 CDS open 4967-5962 _na     331_aa galE UDP-glucose 4-epimerase GalE
3557 GG669912.1 GCA000159215_00039 CDS open 6052-7005 _na     317_aa Exopolyphosphatase
3558 GG669912.1 GCA000159215_00040 CDS open 7019-9136 _na     705_aa RNA degradosome polyphosphate kinase
3559 GG669912.1 GCA000159215_00034 gene open 176-1399 arcA
3560 GG669912.1 GCA000159215_00035 gene open 1460-2389 arcC
3561 GG669912.1 GCA000159215_00036 gene open 2405-3406 argF
3562 GG669912.1 GCA000159215_00037 gene open 3895-4746
3563 GG669912.1 GCA000159215_00038 gene open 4967-5962 galE
3564 GG669912.1 GCA000159215_00039 gene open 6052-7005
3565 GG669912.1 GCA000159215_00040 gene open 7019-9136
3566 GG669913.1 GCA000159215_00031 CDS open 34-1077 _na     347_aa amino acid permease
3567 GG669913.1 GCA000159215_00032 CDS open 1228-2349 _na     373_aa vitamin B12 independent methionine synthase
3568 GG669913.1 GCA000159215_00033 CDS open 2813-3931 _na     372_aa aminotransferase
3569 GG669913.1 GCA000159215_00031 gene open 34-1077
3570 GG669913.1 GCA000159215_00032 gene open 1228-2349
3571 GG669913.1 GCA000159215_00033 gene open 2813-3931
3572 GG669914.1 GCA000159215_00019 CDS open 403-1242 _na     279_aa exodeoxyribonuclease III
3573 GG669914.1 GCA000159215_00020 CDS open 1373-2302 _na     309_aa Gram-positive cocci surface proteins LPxTG domain-containing protein
3574 GG669914.1 GCA000159215_00021 CDS open 2278-3090 _na     270_aa mucin-binding protein
3575 GG669914.1 GCA000159215_00022 CDS open 3752-5056 _na     434_aa Putative proline/betaine transporter
3576 GG669914.1 GCA000159215_00023 CDS open 5416-6177 _na     253_aa Iron compound ABC transporter ATP-binding component
3577 GG669914.1 GCA000159215_00024 CDS open 6170-7096 _na     308_aa isdF putative heme-iron transport system permease protein IsdF
3578 GG669914.1 GCA000159215_00025 CDS open 7098-7976 _na     292_aa isdE heme ABC transporter substrate-binding protein IsdE
3579 GG669914.1 GCA000159215_00026 CDS open 7991-8782 _na     263_aa NEAT domain-containing protein
3580 GG669914.1 GCA000159215_00027 CDS open 8772-10634 _na     620_aa NEAT domain-containing protein
3581 GG669914.1 GCA000159215_00028 CDS open 10830-12368 _na     512_aa Gram-positive cocci surface proteins LPxTG domain-containing protein
3582 GG669914.1 GCA000159215_00029 CDS open 12870-13661 _na     263_aa DMT superfamily drug metabolite transporter
3583 GG669914.1 GCA000159215_00030 CDS open 13713-14279 _na     188_aa Cadmium transporter
3584 GG669914.1 GCA000159215_00019 gene open 403-1242
3585 GG669914.1 GCA000159215_00020 gene open 1373-2302
3586 GG669914.1 GCA000159215_00021 gene open 2278-3090
3587 GG669914.1 GCA000159215_00022 gene open 3752-5056
3588 GG669914.1 GCA000159215_00023 gene open 5416-6177
3589 GG669914.1 GCA000159215_00024 gene open 6170-7096 isdF
3590 GG669914.1 GCA000159215_00025 gene open 7098-7976 isdE
3591 GG669914.1 GCA000159215_00026 gene open 7991-8782
3592 GG669914.1 GCA000159215_00027 gene open 8772-10634
3593 GG669914.1 GCA000159215_00028 gene open 10830-12368
3594 GG669914.1 GCA000159215_00029 gene open 12870-13661
3595 GG669914.1 GCA000159215_00030 gene open 13713-14279
3596 GG669915.1 GCA000159215_00017 CDS open 174-1424 _na     416_aa Transposase
3597 GG669915.1 GCA000159215_00018 CDS open 1503-1955 _na     150_aa tnpA IS200/IS605 family transposase
3598 GG669915.1 GCA000159215_00017 gene open 174-1424
3599 GG669915.1 GCA000159215_00018 gene open 1503-1955 tnpA
3600 GG669916.1 GCA000159215_00015 CDS open 68-781 _na     237_aa Insertion element IS150 protein InsJ-like helix-turn-helix domain-containing protein
3601 GG669916.1 GCA000159215_00016 CDS open 799-1653 _na     284_aa IS3 family transposase
3602 GG669916.1 GCA000159215_00015 gene open 68-781
3603 GG669916.1 GCA000159215_00016 gene open 799-1653
3604 GG669917.1 GCA000159215_00014 CDS open 221-1384 _na     387_aa Transposase
3605 GG669917.1 GCA000159215_00014 gene open 221-1384
3606 GG669919.1 GCA000159215_00013 CDS open 322-672 _na     116_aa Insertion element IS150 protein InsJ-like helix-turn-helix domain-containing protein
3607 GG669919.1 GCA000159215_00013 gene open 322-672
3608 GG669923.1 GCA000159215_00012 CDS open 81-1067 _na     328_aa tra8 IS30 family transposase
3609 GG669923.1 GCA000159215_00012 gene open 81-1067 tra8
3610 GG669925.1 GCA000159215_00011 CDS open 450-875 _na     141_aa Transposase putative helix-turn-helix domain-containing protein
3611 GG669925.1 GCA000159215_00011 gene open 450-875
3612 GG669926.1 GCA000159215_00010 CDS open 69-947 _na     292_aa insO IS3 family transposase
3613 GG669926.1 GCA000159215_00010 gene open 69-947 insO
3614 GG669929.1 GCA000159215_00009 CDS open 32-748 _na     238_aa hypothetical protein
3615 GG669929.1 GCA000159215_00009 gene open 32-748
3616 GG669930.1 GCA000159215_00007 gene open 599-671 trnT
3617 GG669930.1 GCA000159215_00008 gene open 719-791 trnN
3618 GG669930.1 GCA000159215_00007 tRNA open 599-671 trnT tRNA-Thr(cgt)
3619 GG669930.1 GCA000159215_00008 tRNA open 719-791 trnN tRNA-Asn(gtt)
3620 GG669934.1 GCA000159215_00006 gene open 95-464 ssrA
3621 GG669934.1 GCA000159215_00006 tmRNA open 95-464 ssrA transfer-messenger RNA%2C SsrA
3622 GG669937.1 GCA000159215_00005 CDS open 172-384 _na     70_aa helix-turn-helix domain-containing protein
3623 GG669937.1 GCA000159215_00005 gene open 172-384
3624 GG669938.1 GCA000159215_00004 CDS open 90-395 _na     101_aa transposase
3625 GG669938.1 GCA000159215_00004 gene open 90-395
3626 GG669942.1 GCA000159215_00003 gene open 228-300 trnT
3627 GG669942.1 GCA000159215_00003 tRNA open 228-300 trnT tRNA-Thr(agt)
3628 GG669970.1 GCA000159215_00001 gene open 37-110 trnI
3629 GG669970.1 GCA000159215_00002 gene open 115-187 trnA
3630 GG669970.1 GCA000159215_00001 tRNA open 37-110 trnI tRNA-Ile(gat)
3631 GG669970.1 GCA000159215_00002 tRNA open 115-187 trnA tRNA-Ala(tgc)