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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

BAKTAGenome Explorer: Lacticaseibacillus paracasei (GCA_000159495.1)

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BAKTA Annotations for GCA_000159495.1
Genome Selected: Lacticaseibacillus paracasei
ContigsBases CDSrRNA tmRNAtRNA
73 2991737 2765 4 1 54
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Annotation Table [page:12]    |    Number of Records Found: 5686 [12 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  10  11  12  ]
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Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 BAKTA
Gene		 BAKTA
GeneProduct
5501 GG670160.1 GCA000159495_00165 gene open 71747-72079
5502 GG670160.1 GCA000159495_00166 gene open 72370-72969 lepB
5503 GG670160.1 GCA000159495_00167 gene open 73047-73985
5504 GG670160.1 GCA000159495_00168 gene open 74364-75911 ccmA
5505 GG670160.1 GCA000159495_00169 gene open 76071-76811
5506 GG670161.1 GCA000159495_00089 gene open 1-1574 rrl
5507 GG670161.1 GCA000159495_00090 gene open 2281-3850 rrs
5508 GG670161.1 GCA000159495_00089 rRNA open 1-1574 rrl 23S ribosomal RNA
5509 GG670161.1 GCA000159495_00090 rRNA open 2281-3850 rrs 16S ribosomal RNA
5510 GG670162.1 GCA000159495_00085 CDS open 60-839 _na     259_aa Orf2 protein
5511 GG670162.1 GCA000159495_00086 CDS open 1009-1098 _na     29_aa Lpt
5512 GG670162.1 GCA000159495_00087 CDS open 1388-1936 _na     182_aa replication protein B
5513 GG670162.1 GCA000159495_00088 CDS open 2860-5010 _na     716_aa Peptidoglycan-binding protein
5514 GG670162.1 GCA000159495_00085 gene open 60-839
5515 GG670162.1 GCA000159495_00086 gene open 1009-1098
5516 GG670162.1 GCA000159495_00087 gene open 1388-1936
5517 GG670162.1 GCA000159495_00088 gene open 2860-5010
5518 GG670163.1 GCA000159495_00081 CDS open 239-490 _na     83_aa hypothetical protein
5519 GG670163.1 GCA000159495_00082 CDS open 3016-4455 _na     479_aa IS3 family transposase
5520 GG670163.1 GCA000159495_00083 CDS open 4714-6237 _na     507_aa primase C-terminal domain-containing protein
5521 GG670163.1 GCA000159495_00084 CDS open 6297-6434 _na     45_aa hypothetical protein
5522 GG670163.1 GCA000159495_00081 gene open 239-490
5523 GG670163.1 GCA000159495_00082 gene open 3016-4455
5524 GG670163.1 GCA000159495_00083 gene open 4714-6237
5525 GG670163.1 GCA000159495_00084 gene open 6297-6434
5526 GG670164.1 GCA000159495_00080 CDS open 290-1669 _na     459_aa brnQ branched-chain amino acid transport system II carrier protein
5527 GG670164.1 GCA000159495_00080 gene open 290-1669 brnQ
5528 GG670165.1 GCA000159495_00067 CDS open 56-835 _na     259_aa Replication protein B-1
5529 GG670165.1 GCA000159495_00068 CDS open 1514-2011 _na     165_aa Replication protein B
5530 GG670165.1 GCA000159495_00069 CDS open 2316-3371 _na     351_aa RND family efflux transporter MFP subunit
5531 GG670165.1 GCA000159495_00070 CDS open 3368-4048 _na     226_aa ABC transporter ATP-binding protein
5532 GG670165.1 GCA000159495_00071 CDS open 4048-5217 _na     389_aa ABC transporter permease
5533 GG670165.1 GCA000159495_00072 CDS open 5835-6332 _na     165_aa Stage II sporulation protein M
5534 GG670165.1 GCA000159495_00073 CDS open 6348-6881 _na     177_aa Yip1 domain-containing protein
5535 GG670165.1 GCA000159495_00074 CDS open 6919-7203 _na     94_aa Gassericin A
5536 GG670165.1 GCA000159495_00075 CDS open 7323-7481 _na     52_aa hypothetical protein
5537 GG670165.1 GCA000159495_00076 CDS open 7918-8229 _na     103_aa Mobilization protein
5538 GG670165.1 GCA000159495_00077 CDS open 8211-9605 _na     464_aa Mobilization protein A
5539 GG670165.1 GCA000159495_00078 CDS open 9618-10097 _na     159_aa hypothetical protein
5540 GG670165.1 GCA000159495_00079 CDS open 10109-10702 _na     197_aa hypothetical protein
5541 GG670165.1 GCA000159495_00067 gene open 56-835
5542 GG670165.1 GCA000159495_00068 gene open 1514-2011
5543 GG670165.1 GCA000159495_00069 gene open 2316-3371
5544 GG670165.1 GCA000159495_00070 gene open 3368-4048
5545 GG670165.1 GCA000159495_00071 gene open 4048-5217
5546 GG670165.1 GCA000159495_00072 gene open 5835-6332
5547 GG670165.1 GCA000159495_00073 gene open 6348-6881
5548 GG670165.1 GCA000159495_00074 gene open 6919-7203
5549 GG670165.1 GCA000159495_00075 gene open 7323-7481
5550 GG670165.1 GCA000159495_00076 gene open 7918-8229
5551 GG670165.1 GCA000159495_00077 gene open 8211-9605
5552 GG670165.1 GCA000159495_00078 gene open 9618-10097
5553 GG670165.1 GCA000159495_00079 gene open 10109-10702
5554 GG670166.1 rep_origin open 3710-5581
5555 GG670166.1 GCA000159495_00062 CDS open 83-1168 _na     361_aa Serine protease
5556 GG670166.1 GCA000159495_00063 CDS open 1220-1978 _na     252_aa hypothetical protein
5557 GG670166.1 GCA000159495_00064 CDS open 2216-2719 _na     167_aa Knr4/Smi1-like domain-containing protein
5558 GG670166.1 GCA000159495_00065 CDS open 2732-3634 _na     300_aa HNH endonuclease signature motif containing protein
5559 GG670166.1 GCA000159495_00066 CDS open 4910-5089 _na     59_aa Replication protein
5560 GG670166.1 GCA000159495_00062 gene open 83-1168
5561 GG670166.1 GCA000159495_00063 gene open 1220-1978
5562 GG670166.1 GCA000159495_00064 gene open 2216-2719
5563 GG670166.1 GCA000159495_00065 gene open 2732-3634
5564 GG670166.1 GCA000159495_00066 gene open 4910-5089
5565 GG670167.1 GCA000159495_00052 CDS open 2649-3197 _na     182_aa RNA polymerase factor sigma-70
5566 GG670167.1 GCA000159495_00053 CDS open 3575-5293 _na     572_aa Amino acid permease
5567 GG670167.1 GCA000159495_00054 CDS open 5580-6788 _na     402_aa rfaB 1%2C2-diacylglycerol 3-glucosyltransferase
5568 GG670167.1 GCA000159495_00055 CDS open 6791-7819 _na     342_aa rfaB Glycosyltransferase%2C group 1 family protein
5569 GG670167.1 GCA000159495_00056 CDS open 7832-8845 _na     337_aa aglD2 Phosphatidylglycerol lysyltransferase
5570 GG670167.1 GCA000159495_00057 CDS open 8881-9234 _na     117_aa hypothetical protein
5571 GG670167.1 GCA000159495_00058 CDS open 9320-10495 _na     391_aa pyridoxal phosphate-dependent aminotransferase
5572 GG670167.1 GCA000159495_00059 CDS open 10741-11019 _na     92_aa ykuJ DUF1797 domain-containing protein
5573 GG670167.1 GCA000159495_00060 CDS open 11250-13343 _na     697_aa mdoB Arylsulfatase
5574 GG670167.1 GCA000159495_00061 CDS open 13536-13976 _na     146_aa fur Fe2+/Zn2+ uptake regulation protein
5575 GG670167.1 GCA000159495_00052 gene open 2649-3197
5576 GG670167.1 GCA000159495_00053 gene open 3575-5293
5577 GG670167.1 GCA000159495_00054 gene open 5580-6788 rfaB
5578 GG670167.1 GCA000159495_00055 gene open 6791-7819 rfaB
5579 GG670167.1 GCA000159495_00056 gene open 7832-8845 aglD2
5580 GG670167.1 GCA000159495_00057 gene open 8881-9234
5581 GG670167.1 GCA000159495_00058 gene open 9320-10495
5582 GG670167.1 GCA000159495_00059 gene open 10741-11019 ykuJ
5583 GG670167.1 GCA000159495_00060 gene open 11250-13343 mdoB
5584 GG670167.1 GCA000159495_00061 gene open 13536-13976 fur
5585 GG670167.1 GCA000159495_00027 gene open 13-85 trnV
5586 GG670167.1 GCA000159495_00028 gene open 88-160 trnK
5587 GG670167.1 GCA000159495_00029 gene open 202-274 trnT
5588 GG670167.1 GCA000159495_00030 gene open 308-379 trnG
5589 GG670167.1 GCA000159495_00031 gene open 440-513 trnR
5590 GG670167.1 GCA000159495_00032 gene open 518-591 trnP
5591 GG670167.1 GCA000159495_00033 gene open 618-691 trnM
5592 GG670167.1 GCA000159495_00034 gene open 700-773 trnI
5593 GG670167.1 GCA000159495_00035 gene open 822-895 trnfM
5594 GG670167.1 GCA000159495_00036 gene open 903-976 trnD
5595 GG670167.1 GCA000159495_00037 gene open 982-1054 trnF
5596 GG670167.1 GCA000159495_00038 gene open 1074-1144 trnG
5597 GG670167.1 GCA000159495_00039 gene open 1159-1232 trnI
5598 GG670167.1 GCA000159495_00040 gene open 1262-1349 trnS
5599 GG670167.1 GCA000159495_00041 gene open 1354-1425 trnE
5600 GG670167.1 GCA000159495_00042 gene open 1435-1526 trnS
5601 GG670167.1 GCA000159495_00043 gene open 1537-1610 trnfM
5602 GG670167.1 GCA000159495_00044 gene open 1618-1691 trnD
5603 GG670167.1 GCA000159495_00045 gene open 1735-1807 trnF
5604 GG670167.1 GCA000159495_00046 gene open 1812-1892 trnY
5605 GG670167.1 GCA000159495_00047 gene open 1899-1969 trnW
5606 GG670167.1 GCA000159495_00048 gene open 1981-2053 trnH
5607 GG670167.1 GCA000159495_00049 gene open 2062-2133 trnQ
5608 GG670167.1 GCA000159495_00050 gene open 2176-2246 trnC
5609 GG670167.1 GCA000159495_00051 gene open 2293-2376 trnL
5610 GG670167.1 GCA000159495_00027 tRNA open 13-85 trnV tRNA-Val(tac)
5611 GG670167.1 GCA000159495_00028 tRNA open 88-160 trnK tRNA-Lys(ttt)
5612 GG670167.1 GCA000159495_00029 tRNA open 202-274 trnT tRNA-Thr(tgt)
5613 GG670167.1 GCA000159495_00030 tRNA open 308-379 trnG tRNA-Gly(gcc)
5614 GG670167.1 GCA000159495_00031 tRNA open 440-513 trnR tRNA-Arg(acg)
5615 GG670167.1 GCA000159495_00032 tRNA open 518-591 trnP tRNA-Pro(tgg)
5616 GG670167.1 GCA000159495_00033 tRNA open 618-691 trnM tRNA-Met(cat)
5617 GG670167.1 GCA000159495_00034 tRNA open 700-773 trnI tRNA-Ile2(cat)
5618 GG670167.1 GCA000159495_00035 tRNA open 822-895 trnfM tRNA-fMet(cat)
5619 GG670167.1 GCA000159495_00036 tRNA open 903-976 trnD tRNA-Asp(gtc)
5620 GG670167.1 GCA000159495_00037 tRNA open 982-1054 trnF tRNA-Phe(gaa)
5621 GG670167.1 GCA000159495_00038 tRNA open 1074-1144 trnG tRNA-Gly(tcc)
5622 GG670167.1 GCA000159495_00039 tRNA open 1159-1232 trnI tRNA-Ile(gat)
5623 GG670167.1 GCA000159495_00040 tRNA open 1262-1349 trnS tRNA-Ser(gct)
5624 GG670167.1 GCA000159495_00041 tRNA open 1354-1425 trnE tRNA-Glu(ttc)
5625 GG670167.1 GCA000159495_00042 tRNA open 1435-1526 trnS tRNA-Ser(tga)
5626 GG670167.1 GCA000159495_00043 tRNA open 1537-1610 trnfM tRNA-fMet(cat)
5627 GG670167.1 GCA000159495_00044 tRNA open 1618-1691 trnD tRNA-Asp(gtc)
5628 GG670167.1 GCA000159495_00045 tRNA open 1735-1807 trnF tRNA-Phe(gaa)
5629 GG670167.1 GCA000159495_00046 tRNA open 1812-1892 trnY tRNA-Tyr(gta)
5630 GG670167.1 GCA000159495_00047 tRNA open 1899-1969 trnW tRNA-Trp(cca)
5631 GG670167.1 GCA000159495_00048 tRNA open 1981-2053 trnH tRNA-His(gtg)
5632 GG670167.1 GCA000159495_00049 tRNA open 2062-2133 trnQ tRNA-Gln(ttg)
5633 GG670167.1 GCA000159495_00050 tRNA open 2176-2246 trnC tRNA-Cys(gca)
5634 GG670167.1 GCA000159495_00051 tRNA open 2293-2376 trnL tRNA-Leu(caa)
5635 GG670168.1 GCA000159495_00024 CDS open 170-1705 _na     511_aa istA IS21 family transposase
5636 GG670168.1 GCA000159495_00025 CDS open 1705-2463 _na     252_aa istB IS21-like element helper ATPase IstB
5637 GG670168.1 GCA000159495_00026 CDS open 2460-2666 _na     68_aa hypothetical protein
5638 GG670168.1 GCA000159495_00024 gene open 170-1705 istA
5639 GG670168.1 GCA000159495_00025 gene open 1705-2463 istB
5640 GG670168.1 GCA000159495_00026 gene open 2460-2666
5641 GG670169.1 GCA000159495_00022 CDS open 55-1224 _na     389_aa Helix-turn-helix domain protein
5642 GG670169.1 GCA000159495_00023 CDS open 1243-1935 _na     230_aa hypothetical protein
5643 GG670169.1 GCA000159495_00022 gene open 55-1224
5644 GG670169.1 GCA000159495_00023 gene open 1243-1935
5645 GG670170.1 GCA000159495_00021 CDS open 32-475 _na     147_aa insH Transposase InsH N-terminal domain-containing protein
5646 GG670170.1 GCA000159495_00021 gene open 32-475 insH
5647 GG670171.1 GCA000159495_00019 CDS open 187-1017 _na     276_aa IS3 family transposase
5648 GG670171.1 GCA000159495_00020 CDS open 1047-1322 _na     91_aa Transposase
5649 GG670171.1 GCA000159495_00019 gene open 187-1017
5650 GG670171.1 GCA000159495_00020 gene open 1047-1322
5651 GG670172.1 GCA000159495_00018 gene open 6-1348 rrl
5652 GG670172.1 GCA000159495_00018 rRNA open 6-1348 rrl 23S ribosomal RNA
5653 GG670173.1 GCA000159495_00017 CDS open 486-1043 _na     185_aa CHRD domain-containing protein
5654 GG670173.1 GCA000159495_00017 gene open 486-1043
5655 GG670174.1 GCA000159495_00016 CDS open 40-909 _na     289_aa IS5 family transposase
5656 GG670174.1 GCA000159495_00016 gene open 40-909
5657 GG670175.1 GCA000159495_00015 CDS open 107-643 _na     178_aa hypothetical protein
5658 GG670175.1 GCA000159495_00015 gene open 107-643
5659 GG670176.1 GCA000159495_00014 CDS open 478-810 _na     110_aa Transposase%2C tnp4
5660 GG670176.1 GCA000159495_00014 gene open 478-810
5661 GG670177.1 GCA000159495_00013 CDS open 100-348 _na     82_aa hypothetical protein
5662 GG670177.1 GCA000159495_00013 gene open 100-348
5663 GG670180.1 GCA000159495_00012 CDS open 90-602 _na     170_aa Ig-like domain-containing protein
5664 GG670180.1 GCA000159495_00012 gene open 90-602
5665 GG670181.1 GCA000159495_00011 CDS open 114-623 _na     169_aa Acid-resistance membrane protein
5666 GG670181.1 GCA000159495_00011 gene open 114-623
5667 GG670187.1 GCA000159495_00010 CDS open 170-355 _na     61_aa hypothetical protein
5668 GG670187.1 GCA000159495_00010 gene open 170-355
5669 GG670189.1 GCA000159495_00009 CDS open 93-416 _na     107_aa Phage protein
5670 GG670189.1 GCA000159495_00009 gene open 93-416
5671 GG670192.1 GCA000159495_00008 CDS open 24-359 _na     111_aa hypothetical protein
5672 GG670192.1 GCA000159495_00008 gene open 24-359
5673 GG670194.1 GCA000159495_00007 CDS open 109-387 _na     92_aa hypothetical protein
5674 GG670194.1 GCA000159495_00007 gene open 109-387
5675 GG670195.1 GCA000159495_00006 CDS open 136-342 _na     68_aa DUF1722 domain-containing protein
5676 GG670195.1 GCA000159495_00006 gene open 136-342
5677 GG670196.1 GCA000159495_00005 CDS open 97-426 _na     109_aa IS30 family transposase
5678 GG670196.1 GCA000159495_00005 gene open 97-426
5679 GG670208.1 GCA000159495_00003 gene open 24-97 trnI
5680 GG670208.1 GCA000159495_00004 gene open 132-204 trnA
5681 GG670208.1 GCA000159495_00003 tRNA open 24-97 trnI tRNA-Ile(gat)
5682 GG670208.1 GCA000159495_00004 tRNA open 132-204 trnA tRNA-Ala(tgc)
5683 GG670216.1 GCA000159495_00002 gene open 105-217 rrf
5684 GG670216.1 GCA000159495_00002 rRNA open 105-217 rrf 5S ribosomal RNA
5685 GG670218.1 GCA000159495_00001 CDS open 28-138 _na     36_aa hypothetical protein
5686 GG670218.1 GCA000159495_00001 gene open 28-138