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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

BAKTAGenome Explorer: Limosilactobacillus fermentum (GCA_029823225.1)

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BAKTA Annotations for GCA_029823225.1
Genome Selected: Limosilactobacillus fermentum
ContigsBases CDSrRNA tmRNAtRNA
112 1817617 1771 3 0 56
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Annotation Table [page:8]    |    Number of Records Found: 3690 [8 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 BAKTA
Gene		 BAKTA
GeneProduct
3501 JARACC010000071.1 GCA029823225_01648 gene open 9691-11241
3502 JARACC010000071.1 GCA029823225_01649 gene open 11542-12009
3503 JARACC010000071.1 GCA029823225_01650 gene open 12028-12252
3504 JARACC010000071.1 GCA029823225_01651 gene open 12345-12701
3505 JARACC010000071.1 GCA029823225_01652 gene open 13270-13992 purC
3506 JARACC010000071.1 GCA029823225_01653 gene open 13995-14237 purS
3507 JARACC010000071.1 GCA029823225_01654 gene open 14238-14918 purQ
3508 JARACC010000071.1 GCA029823225_01655 gene open 14922-17147 purL
3509 JARACC010000071.1 GCA029823225_01656 gene open 17123-18586 purF
3510 JARACC010000071.1 GCA029823225_01657 gene open 18586-19623 purM
3511 JARACC010000071.1 GCA029823225_01658 gene open 19632-20213 purN
3512 JARACC010000071.1 GCA029823225_01659 gene open 20215-21750 purH
3513 JARACC010000071.1 GCA029823225_01660 gene open 21905-23158
3514 JARACC010000072.1 GCA029823225_01661 CDS open 107-829 _na     240_aa phoB Phosphate regulon transcriptional regulatory protein PhoB
3515 JARACC010000072.1 GCA029823225_01662 CDS open 829-2331 _na     500_aa histidine kinase
3516 JARACC010000072.1 GCA029823225_01663 CDS open 2534-3394 _na     286_aa glcU Glucose uptake protein GlcU
3517 JARACC010000072.1 GCA029823225_01664 CDS open 3826-4005 _na     59_aa Transposase
3518 JARACC010000072.1 GCA029823225_01665 CDS open 4002-4889 _na     295_aa tnp IS3 family ISLpl2 transposase ORF B
3519 JARACC010000072.1 GCA029823225_01661 gene open 107-829 phoB
3520 JARACC010000072.1 GCA029823225_01662 gene open 829-2331
3521 JARACC010000072.1 GCA029823225_01663 gene open 2534-3394 glcU
3522 JARACC010000072.1 GCA029823225_01664 gene open 3826-4005
3523 JARACC010000072.1 GCA029823225_01665 gene open 4002-4889 tnp
3524 JARACC010000073.1 GCA029823225_01666 CDS open 14-271 _na     85_aa hypothetical protein
3525 JARACC010000073.1 GCA029823225_01667 CDS open 359-1303 _na     314_aa iolS Protein IolS
3526 JARACC010000073.1 GCA029823225_01668 CDS open 1427-2719 _na     430_aa dltD D-alanyl-lipoteichoic acid biosynthesis protein DltD
3527 JARACC010000073.1 GCA029823225_01669 CDS open 2732-2968 _na     78_aa dltC D-alanine--poly(phosphoribitol) ligase subunit DltC
3528 JARACC010000073.1 GCA029823225_01670 CDS open 2998-4224 _na     408_aa dltB D-alanyl-lipoteichoic acid biosynthesis protein DltB
3529 JARACC010000073.1 GCA029823225_01671 CDS open 4224-5753 _na     509_aa dltA D-alanine--poly(phosphoribitol) ligase subunit DltA
3530 JARACC010000073.1 GCA029823225_01672 CDS open 5768-5899 _na     43_aa dltX Teichoic acid D-Ala incorporation-associated protein DltX
3531 JARACC010000073.1 GCA029823225_01673 CDS open 6125-7258 _na     377_aa Nuclease SbcCD subunit D
3532 JARACC010000073.1 GCA029823225_01674 CDS open 7255-10359 _na     1034_aa Nuclease SbcCD subunit C
3533 JARACC010000073.1 GCA029823225_01675 CDS open 10646-11944 _na     432_aa serS serine--tRNA ligase
3534 JARACC010000073.1 GCA029823225_01677 CDS open 12447-13460 _na     337_aa trpS tryptophan--tRNA ligase
3535 JARACC010000073.1 GCA029823225_01678 CDS open 13718-14971 _na     417_aa tyrS tyrosine--tRNA ligase
3536 JARACC010000073.1 GCA029823225_01679 CDS open 15439-16893 _na     484_aa Glutamine ABC transporter permease component
3537 JARACC010000073.1 GCA029823225_01680 CDS open 16897-17640 _na     247_aa ABC-type polar amino acid transport system%2C ATPase component
3538 JARACC010000073.1 GCA029823225_01666 gene open 14-271
3539 JARACC010000073.1 GCA029823225_01667 gene open 359-1303 iolS
3540 JARACC010000073.1 GCA029823225_01668 gene open 1427-2719 dltD
3541 JARACC010000073.1 GCA029823225_01669 gene open 2732-2968 dltC
3542 JARACC010000073.1 GCA029823225_01670 gene open 2998-4224 dltB
3543 JARACC010000073.1 GCA029823225_01671 gene open 4224-5753 dltA
3544 JARACC010000073.1 GCA029823225_01672 gene open 5768-5899 dltX
3545 JARACC010000073.1 GCA029823225_01673 gene open 6125-7258
3546 JARACC010000073.1 GCA029823225_01674 gene open 7255-10359
3547 JARACC010000073.1 GCA029823225_01675 gene open 10646-11944 serS
3548 JARACC010000073.1 GCA029823225_01677 gene open 12447-13460 trpS
3549 JARACC010000073.1 GCA029823225_01678 gene open 13718-14971 tyrS
3550 JARACC010000073.1 GCA029823225_01679 gene open 15439-16893
3551 JARACC010000073.1 GCA029823225_01680 gene open 16897-17640
3552 JARACC010000073.1 GCA029823225_01676 gene open 12256-12327 trnE
3553 JARACC010000073.1 GCA029823225_01676 tRNA open 12256-12327 trnE tRNA-Glu(ttc)
3554 JARACC010000074.1 GCA029823225_01681 CDS open 922-1866 _na     314_aa L-2-hydroxyisocaproate dehydrogenase
3555 JARACC010000074.1 GCA029823225_01682 CDS open 2233-2478 _na     81_aa DUF1828 domain-containing protein
3556 JARACC010000074.1 GCA029823225_01683 CDS open 2622-3743 _na     373_aa Aryl-alcohol dehydrogenase
3557 JARACC010000074.1 GCA029823225_01684 CDS open 3807-4643 _na     278_aa Citrate lyase regulator
3558 JARACC010000074.1 GCA029823225_01685 CDS open 4715-6148 _na     477_aa triphosphoribosyl-dephospho-CoA synthase
3559 JARACC010000074.1 GCA029823225_01686 CDS open 6126-6911 _na     261_aa ydjP AB hydrolase superfamily protein YdjP
3560 JARACC010000074.1 GCA029823225_01687 CDS open 7244-7828 _na     194_aa Tyr recombinase domain-containing protein
3561 JARACC010000074.1 GCA029823225_01688 CDS open 7943-8533 _na     196_aa HTH tetR-type domain-containing protein
3562 JARACC010000074.1 GCA029823225_01681 gene open 922-1866
3563 JARACC010000074.1 GCA029823225_01682 gene open 2233-2478
3564 JARACC010000074.1 GCA029823225_01683 gene open 2622-3743
3565 JARACC010000074.1 GCA029823225_01684 gene open 3807-4643
3566 JARACC010000074.1 GCA029823225_01685 gene open 4715-6148
3567 JARACC010000074.1 GCA029823225_01686 gene open 6126-6911 ydjP
3568 JARACC010000074.1 GCA029823225_01687 gene open 7244-7828
3569 JARACC010000074.1 GCA029823225_01688 gene open 7943-8533
3570 JARACC010000076.1 GCA029823225_01689 CDS open 626-1612 _na     328_aa Glycosyltransferase
3571 JARACC010000076.1 GCA029823225_01689 gene open 626-1612
3572 JARACC010000077.1 GCA029823225_01690 CDS open 622-1041 _na     139_aa Branched-chain amino acid transporter
3573 JARACC010000077.1 GCA029823225_01691 CDS open 1051-1911 _na     286_aa Branched-chain amino acid ABC transporter permease
3574 JARACC010000077.1 GCA029823225_01692 CDS open 2246-3541 _na     431_aa serine-type D-Ala-D-Ala carboxypeptidase
3575 JARACC010000077.1 GCA029823225_01693 CDS open 3541-4683 _na     380_aa histidine kinase
3576 JARACC010000077.1 GCA029823225_01694 CDS open 4881-5579 _na     232_aa phoB Phosphate regulon transcriptional regulatory protein PhoB
3577 JARACC010000077.1 GCA029823225_01695 CDS open 5767-6273 _na     168_aa DUF985 domain-containing protein
3578 JARACC010000077.1 GCA029823225_01696 CDS open 6387-6593 _na     68_aa DUF1828 domain-containing protein
3579 JARACC010000077.1 GCA029823225_01690 gene open 622-1041
3580 JARACC010000077.1 GCA029823225_01691 gene open 1051-1911
3581 JARACC010000077.1 GCA029823225_01692 gene open 2246-3541
3582 JARACC010000077.1 GCA029823225_01693 gene open 3541-4683
3583 JARACC010000077.1 GCA029823225_01694 gene open 4881-5579 phoB
3584 JARACC010000077.1 GCA029823225_01695 gene open 5767-6273
3585 JARACC010000077.1 GCA029823225_01696 gene open 6387-6593
3586 JARACC010000078.1 GCA029823225_01697 CDS open 78-734 _na     218_aa nfnB Nitroreductase NfnB
3587 JARACC010000078.1 GCA029823225_01698 CDS open 875-1483 _na     202_aa Haloalkane dehalogenase
3588 JARACC010000078.1 GCA029823225_01699 CDS open 1432-2412 _na     326_aa SDR family NAD(P)-dependent oxidoreductase
3589 JARACC010000078.1 GCA029823225_01700 CDS open 2498-2797 _na     99_aa 2%2C5-diketo-D-gluconic acid reductase B
3590 JARACC010000078.1 GCA029823225_01701 CDS open 2797-3186 _na     129_aa 2%2C5-didehydrogluconate reductase
3591 JARACC010000078.1 GCA029823225_01702 CDS open 3249-3443 _na     64_aa csbD CsbD family protein
3592 JARACC010000078.1 GCA029823225_01703 CDS open 3476-3628 _na     50_aa hypothetical protein
3593 JARACC010000078.1 GCA029823225_01704 CDS open 3844-3936 _na     30_aa Aryl-alcohol dehydrogenase related enzyme
3594 JARACC010000078.1 GCA029823225_01697 gene open 78-734 nfnB
3595 JARACC010000078.1 GCA029823225_01698 gene open 875-1483
3596 JARACC010000078.1 GCA029823225_01699 gene open 1432-2412
3597 JARACC010000078.1 GCA029823225_01700 gene open 2498-2797
3598 JARACC010000078.1 GCA029823225_01701 gene open 2797-3186
3599 JARACC010000078.1 GCA029823225_01702 gene open 3249-3443 csbD
3600 JARACC010000078.1 GCA029823225_01703 gene open 3476-3628
3601 JARACC010000078.1 GCA029823225_01704 gene open 3844-3936
3602 JARACC010000079.1 regulatory_region open 4040-4277 T-box leader
3603 JARACC010000079.1 GCA029823225_01705 CDS open 379-771 _na     130_aa DUF2628 domain-containing protein
3604 JARACC010000079.1 GCA029823225_01706 CDS open 914-2452 _na     512_aa Glycosyltransferase Gtf1
3605 JARACC010000079.1 GCA029823225_01707 CDS open 2452-3948 _na     498_aa gtfA UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase GtfA subunit
3606 JARACC010000079.1 GCA029823225_01708 CDS open 4358-5200 _na     280_aa Lipoprotein
3607 JARACC010000079.1 GCA029823225_01709 CDS open 5226-6290 _na     354_aa metN Methionine import ATP-binding protein MetN
3608 JARACC010000079.1 GCA029823225_01710 CDS open 6283-6984 _na     233_aa ABC transporter permease component
3609 JARACC010000079.1 GCA029823225_01711 CDS open 7198-8346 _na     382_aa putative succinyl-diaminopimelate desuccinylase
3610 JARACC010000079.1 GCA029823225_01712 CDS open 8646-10070 _na     474_aa rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
3611 JARACC010000079.1 GCA029823225_01713 CDS open 10509-11150 _na     213_aa hypothetical protein
3612 JARACC010000079.1 GCA029823225_01705 gene open 379-771
3613 JARACC010000079.1 GCA029823225_01706 gene open 914-2452
3614 JARACC010000079.1 GCA029823225_01707 gene open 2452-3948 gtfA
3615 JARACC010000079.1 GCA029823225_01708 gene open 4358-5200
3616 JARACC010000079.1 GCA029823225_01709 gene open 5226-6290 metN
3617 JARACC010000079.1 GCA029823225_01710 gene open 6283-6984
3618 JARACC010000079.1 GCA029823225_01711 gene open 7198-8346
3619 JARACC010000079.1 GCA029823225_01712 gene open 8646-10070 rlmD
3620 JARACC010000079.1 GCA029823225_01713 gene open 10509-11150
3621 JARACC010000080.1 GCA029823225_01747 CDS open 45-1259 _na     404_aa Ammonium transporter
3622 JARACC010000080.1 GCA029823225_01748 CDS open 1496-2815 _na     439_aa mepA Multidrug export protein MepA
3623 JARACC010000080.1 GCA029823225_01749 CDS open 3100-3981 _na     293_aa scrK fructokinase ScrK
3624 JARACC010000080.1 GCA029823225_01747 gene open 45-1259
3625 JARACC010000080.1 GCA029823225_01748 gene open 1496-2815 mepA
3626 JARACC010000080.1 GCA029823225_01749 gene open 3100-3981 scrK
3627 JARACC010000082.1 GCA029823225_01750 gene open 1-1279 rrs
3628 JARACC010000082.1 GCA029823225_01750 rRNA open 1-1279 rrs 16S ribosomal RNA
3629 JARACC010000084.1 GCA029823225_01751 CDS open 154-2082 _na     642_aa zntA Cd(2+)-exporting ATPase
3630 JARACC010000084.1 GCA029823225_01752 CDS open 2105-2332 _na     75_aa copZ Copper chaperone CopZ
3631 JARACC010000084.1 GCA029823225_01753 CDS open 2387-2665 _na     92_aa Iron-sulfur cluster repair di-iron protein%2C ric
3632 JARACC010000084.1 GCA029823225_01754 CDS open 2690-3340 _na     216_aa fixK Nitrogen fixation regulation protein FixK
3633 JARACC010000084.1 GCA029823225_01751 gene open 154-2082 zntA
3634 JARACC010000084.1 GCA029823225_01752 gene open 2105-2332 copZ
3635 JARACC010000084.1 GCA029823225_01753 gene open 2387-2665
3636 JARACC010000084.1 GCA029823225_01754 gene open 2690-3340 fixK
3637 JARACC010000085.1 GCA029823225_01755 CDS open 110-1249 _na     379_aa IS30 family transposase
3638 JARACC010000085.1 GCA029823225_01755 gene open 110-1249
3639 JARACC010000085.1 GCA029823225_01756 gene open 1527-1599 trnT
3640 JARACC010000085.1 GCA029823225_01756 tRNA open 1527-1599 trnT tRNA-Thr(agt)
3641 JARACC010000086.1 GCA029823225_01757 CDS open 570-1019 _na     149_aa Transposase putative helix-turn-helix domain-containing protein
3642 JARACC010000086.1 GCA029823225_01757 gene open 570-1019
3643 JARACC010000089.1 GCA029823225_01758 CDS open 198-581 _na     127_aa Transposase
3644 JARACC010000089.1 GCA029823225_01758 gene open 198-581
3645 JARACC010000090.1 GCA029823225_01825 CDS open 311-454 _na     47_aa IS30 family transposase
3646 JARACC010000090.1 GCA029823225_01826 CDS open 681-2051 _na     456_aa NADH peroxidase
3647 JARACC010000090.1 GCA029823225_01827 CDS open 2433-3785 _na     450_aa Transposase
3648 JARACC010000090.1 GCA029823225_01825 gene open 311-454
3649 JARACC010000090.1 GCA029823225_01826 gene open 681-2051
3650 JARACC010000090.1 GCA029823225_01827 gene open 2433-3785
3651 JARACC010000091.1 GCA029823225_01828 gene open 23-96 trnI
3652 JARACC010000091.1 GCA029823225_01829 gene open 101-173 trnA
3653 JARACC010000091.1 GCA029823225_01828 tRNA open 23-96 trnI tRNA-Ile(gat)
3654 JARACC010000091.1 GCA029823225_01829 tRNA open 101-173 trnA tRNA-Ala(tgc)
3655 JARACC010000092.1 GCA029823225_01830 CDS open 102-1136 _na     344_aa tsaD tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
3656 JARACC010000092.1 GCA029823225_01831 CDS open 1105-1704 _na     199_aa rimI ribosomal protein S18-alanine N-acetyltransferase
3657 JARACC010000092.1 GCA029823225_01830 gene open 102-1136 tsaD
3658 JARACC010000092.1 GCA029823225_01831 gene open 1105-1704 rimI
3659 JARACC010000094.1 GCA029823225_01832 CDS open 157-1821 _na     554_aa Ferredoxin--NADP reductase
3660 JARACC010000094.1 GCA029823225_01833 CDS open 1837-2400 _na     187_aa ahpC alkyl hydroperoxide reductase subunit C
3661 JARACC010000094.1 GCA029823225_01832 gene open 157-1821
3662 JARACC010000094.1 GCA029823225_01833 gene open 1837-2400 ahpC
3663 JARACC010000099.1 GCA029823225_01834 CDS open 34-360 _na     108_aa tnpA IS200/IS605 family transposase
3664 JARACC010000099.1 GCA029823225_01834 gene open 34-360 tnpA
3665 JARACC010000100.1 GCA029823225_00097 gene open 24-96 trnN
3666 JARACC010000100.1 GCA029823225_00098 gene open 144-216 trnT
3667 JARACC010000100.1 GCA029823225_00097 tRNA open 24-96 trnN tRNA-Asn(gtt)
3668 JARACC010000100.1 GCA029823225_00098 tRNA open 144-216 trnT tRNA-Thr(cgt)
3669 JARACC010000101.1 GCA029823225_00099 CDS open 274-1446 _na     390_aa Aminotransferase class V-fold PLP-dependent enzyme
3670 JARACC010000101.1 GCA029823225_00099 gene open 274-1446
3671 JARACC010000102.1 GCA029823225_00100 CDS open 285-1673 _na     462_aa Polysaccharide biosynthesis protein C-terminal domain-containing protein
3672 JARACC010000102.1 GCA029823225_00100 gene open 285-1673
3673 JARACC010000103.1 GCA029823225_00101 CDS open 13-801 _na     262_aa PTS sugar transporter subunit IIB
3674 JARACC010000103.1 GCA029823225_00102 CDS open 821-1624 _na     267_aa PTS system sorbose-specific EIIC component
3675 JARACC010000103.1 GCA029823225_00103 CDS open 1653-2573 _na     306_aa PTS system mannose-specific EIID component
3676 JARACC010000103.1 GCA029823225_00104 CDS open 2601-2924 _na     107_aa DUF956 domain-containing protein
3677 JARACC010000103.1 GCA029823225_00101 gene open 13-801
3678 JARACC010000103.1 GCA029823225_00102 gene open 821-1624
3679 JARACC010000103.1 GCA029823225_00103 gene open 1653-2573
3680 JARACC010000103.1 GCA029823225_00104 gene open 2601-2924
3681 JARACC010000105.1 GCA029823225_00105 CDS open 306-809 _na     167_aa Mutator family transposase
3682 JARACC010000105.1 GCA029823225_00105 gene open 306-809
3683 JARACC010000106.1 GCA029823225_00106 CDS open 216-461 _na     81_aa IS256 family transposase
3684 JARACC010000106.1 GCA029823225_00107 CDS open 607-912 _na     101_aa transposase
3685 JARACC010000106.1 GCA029823225_00106 gene open 216-461
3686 JARACC010000106.1 GCA029823225_00107 gene open 607-912
3687 JARACC010000109.1 GCA029823225_00108 CDS open 59-547 _na     162_aa hypothetical protein
3688 JARACC010000109.1 GCA029823225_00108 gene open 59-547
3689 JARACC010000111.1 GCA029823225_00149 CDS open 235-330 _na     31_aa CRISPR-associated helicase/endonuclease Cas3
3690 JARACC010000111.1 GCA029823225_00149 gene open 235-330