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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Schaalia dentiphila (GCA_000154225.1)

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PROKKA Annotations for GCA_000154225.1
Genome Selected: Schaalia dentiphila
ContigsBases CDSrRNA tmRNAtRNA
2 2393958 2019 8 1 49
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Annotation Table [page:5]    |    Number of Records Found: 2086 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 DS264586.1 GCA_000154225.1_02001 CDS open 2304925-2305245 321_na     106_aa hypothetical protein
2002 DS264586.1 GCA_000154225.1_02002 CDS open 2305337-2307271 1935_na     644_aa btuD_9 Vitamin B12 import ATP-binding protein BtuD
2003 DS264586.1 GCA_000154225.1_02003 CDS open 2307271-2308245 975_na     324_aa ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
2004 DS264586.1 GCA_000154225.1_02004 CDS open 2308285-2309319 1035_na     344_aa ksgA Ribosomal RNA small subunit methyltransferase A
2005 DS264586.1 GCA_000154225.1_02005 CDS open 2309336-2309989 654_na     217_aa hypothetical protein
2006 DS264586.1 GCA_000154225.1_02006 CDS open 2310333-2311772 1440_na     479_aa hypothetical protein
2007 DS264586.1 GCA_000154225.1_02007 CDS open 2311868-2313028 1161_na     386_aa rpf2 Resuscitation-promoting factor Rpf2
2008 DS264586.1 GCA_000154225.1_02008 CDS open 2313248-2314159 912_na     303_aa dtd3 D-aminoacyl-tRNA deacylase
2009 DS264586.1 GCA_000154225.1_02009 CDS open 2314209-2314793 585_na     194_aa yajL Proteinnucleic acid deglycase 3
2010 DS264586.1 GCA_000154225.1_02010 CDS open 2314905-2318315 3411_na     1136_aa btuD_10 Vitamin B12 import ATP-binding protein BtuD
2011 DS264586.1 GCA_000154225.1_02011 CDS open 2318534-2319106 573_na     190_aa hypothetical protein
2012 DS264586.1 tRNA open 2319851-2319943 tRNA-Ser(tga)
2013 DS264586.1 GCA_000154225.1_02013 CDS open 2321232-2321825 594_na     197_aa hypothetical protein
2014 DS264586.1 GCA_000154225.1_02014 CDS open 2321794-2322399 606_na     201_aa ogt Methylated-DNA--protein-cysteine methyltransferase
2015 DS264586.1 GCA_000154225.1_02015 CDS open 2322401-2323723 1323_na     440_aa hypothetical protein
2016 DS264586.1 GCA_000154225.1_02016 CDS open 2323875-2324138 264_na     87_aa hypothetical protein
2017 DS264586.1 GCA_000154225.1_02017 CDS open 2324141-2324398 258_na     85_aa hypothetical protein
2018 DS264586.1 GCA_000154225.1_02018 CDS open 2324401-2325123 723_na     240_aa cnbA Chloronitrobenzene nitroreductase
2019 DS264586.1 GCA_000154225.1_02019 CDS open 2325404-2325661 258_na     85_aa hypothetical protein
2020 DS264586.1 GCA_000154225.1_02020 CDS open 2325913-2326389 477_na     158_aa Alkaline shock protein 23
2021 DS264586.1 GCA_000154225.1_02021 CDS open 2326423-2326599 177_na     58_aa hypothetical protein
2022 DS264586.1 GCA_000154225.1_02022 CDS open 2326602-2327018 417_na     138_aa hypothetical protein
2023 DS264586.1 GCA_000154225.1_02023 CDS open 2327015-2327563 549_na     182_aa hypothetical protein
2024 DS264586.1 GCA_000154225.1_02024 CDS open 2327577-2328230 654_na     217_aa hypothetical protein
2025 DS264586.1 GCA_000154225.1_02025 CDS open 2328253-2328879 627_na     208_aa rpoE ECF RNA polymerase sigma-E factor
2026 DS264586.1 GCA_000154225.1_02026 CDS open 2328879-2329427 549_na     182_aa hypothetical protein
2027 DS264586.1 GCA_000154225.1_02027 CDS open 2329417-2329782 366_na     121_aa hypothetical protein
2028 DS264586.1 GCA_000154225.1_02028 CDS open 2329846-2330925 1080_na     359_aa hypothetical protein
2029 DS264586.1 GCA_000154225.1_02029 CDS open 2331034-2331867 834_na     277_aa hypothetical protein
2030 DS264586.1 GCA_000154225.1_02030 CDS open 2331889-2332329 441_na     146_aa arfB Peptidyl-tRNA hydrolase ArfB
2031 DS264586.1 GCA_000154225.1_02031 CDS open 2332368-2332967 600_na     199_aa hypothetical protein
2032 DS264586.1 GCA_000154225.1_02032 CDS open 2333154-2334134 981_na     326_aa hypothetical protein
2033 DS264586.1 GCA_000154225.1_02033 CDS open 2334227-2336440 2214_na     737_aa hemH_2 Ferrochelatase
2034 DS264586.1 GCA_000154225.1_02034 CDS open 2336634-2337557 924_na     307_aa btuD_11 Vitamin B12 import ATP-binding protein BtuD
2035 DS264586.1 GCA_000154225.1_02035 CDS open 2337544-2338305 762_na     253_aa hypothetical protein
2036 DS264586.1 GCA_000154225.1_02036 CDS open 2338328-2339038 711_na     236_aa hypothetical protein
2037 DS264586.1 GCA_000154225.1_02037 CDS open 2339035-2340168 1134_na     377_aa hypothetical protein
2038 DS264586.1 GCA_000154225.1_02038 CDS open 2340306-2340884 579_na     192_aa hypothetical protein
2039 DS264586.1 GCA_000154225.1_02039 CDS open 2341124-2341672 549_na     182_aa hypothetical protein
2040 DS264586.1 GCA_000154225.1_02040 CDS open 2341915-2342130 216_na     71_aa hypothetical protein
2041 DS264586.1 GCA_000154225.1_02041 CDS open 2342131-2342397 267_na     88_aa hypothetical protein
2042 DS264586.1 GCA_000154225.1_02042 CDS open 2342568-2344259 1692_na     563_aa ruvB_2 Holliday junction ATP-dependent DNA helicase RuvB
2043 DS264586.1 GCA_000154225.1_02043 CDS open 2344549-2345466 918_na     305_aa hypothetical protein
2044 DS264586.1 GCA_000154225.1_02044 CDS open 2345540-2345965 426_na     141_aa hypothetical protein
2045 DS264586.1 GCA_000154225.1_02045 CDS open 2346222-2346581 360_na     119_aa hypothetical protein
2046 DS264586.1 GCA_000154225.1_02046 CDS open 2346713-2347375 663_na     220_aa hypothetical protein
2047 DS264586.1 GCA_000154225.1_02047 CDS open 2347408-2348928 1521_na     506_aa qacA Antiseptic resistance protein
2048 DS264586.1 GCA_000154225.1_02048 CDS open 2349012-2349227 216_na     71_aa hypothetical protein
2049 DS264586.1 GCA_000154225.1_02049 CDS open 2349212-2349724 513_na     170_aa hypothetical protein
2050 DS264586.1 GCA_000154225.1_02050 CDS open 2349726-2349872 147_na     48_aa hypothetical protein
2051 DS264586.1 GCA_000154225.1_02051 CDS open 2350349-2350804 456_na     151_aa hypothetical protein
2052 DS264586.1 GCA_000154225.1_02052 CDS open 2350801-2351391 591_na     196_aa hypothetical protein
2053 DS264586.1 GCA_000154225.1_02053 CDS open 2351653-2352501 849_na     282_aa putative oxidoreductaseMSMEI_2347
2054 DS264586.1 GCA_000154225.1_02054 CDS open 2352656-2353204 549_na     182_aa hypothetical protein
2055 DS264586.1 GCA_000154225.1_02055 CDS open 2353201-2354070 870_na     289_aa hypothetical protein
2056 DS264586.1 GCA_000154225.1_02056 CDS open 2354208-2354420 213_na     70_aa hypothetical protein
2057 DS264586.1 GCA_000154225.1_02057 CDS open 2354604-2356160 1557_na     518_aa guaA GMP synthase [glutamine-hydrolyzing]
2058 DS264586.1 GCA_000154225.1_02058 CDS open 2356312-2356896 585_na     194_aa bioY2 Biotin transporter BioY2
2059 DS264586.1 GCA_000154225.1_02059 CDS open 2357044-2358888 1845_na     614_aa purH Bifunctional purine biosynthesis protein PurH
2060 DS264586.1 misc_RNA open 2358912-2358996 ZMP-ZTP
2061 DS264586.1 GCA_000154225.1_02061 CDS open 2359085-2360464 1380_na     459_aa hypothetical protein
2062 DS264586.1 GCA_000154225.1_02062 CDS open 2360592-2361512 921_na     306_aa sucD Succinate--CoA ligase [ADP-forming] subunit alpha
2063 DS264586.1 GCA_000154225.1_02063 CDS open 2361539-2362726 1188_na     395_aa sucC Succinate--CoA ligase [ADP-forming] subunit beta
2064 DS264586.1 GCA_000154225.1_02064 CDS open 2363783-2366485 2703_na     900_aa uvrD1 ATP-dependent DNA helicase UvrD1
2065 DS264586.1 GCA_000154225.1_02065 CDS open 2366623-2368113 1491_na     496_aa hypothetical protein
2066 DS264586.1 GCA_000154225.1_02066 CDS open 2368246-2368896 651_na     216_aa nreC Oxygen regulatory protein NreC
2067 DS264586.1 GCA_000154225.1_02067 CDS open 2368893-2370083 1191_na     396_aa hypothetical protein
2068 DS264586.1 GCA_000154225.1_02068 CDS open 2370340-2372040 1701_na     566_aa hypothetical protein
2069 DS264586.1 GCA_000154225.1_02069 CDS open 2372056-2372751 696_na     231_aa hypothetical protein
2070 DS264586.1 GCA_000154225.1_02070 CDS open 2372841-2374523 1683_na     560_aa ptsI Phosphoenolpyruvate-protein phosphotransferase
2071 DS264586.1 GCA_000154225.1_02071 CDS open 2374528-2374794 267_na     88_aa ptsH Phosphocarrier protein HPr
2072 DS264586.1 GCA_000154225.1_02072 CDS open 2375080-2376105 1026_na     341_aa degA_2 HTH-type transcriptional regulator DegA
2073 DS264586.1 GCA_000154225.1_02073 CDS open 2376625-2378634 2010_na     669_aa hypothetical protein
2074 DS264586.1 GCA_000154225.1_02074 CDS open 2378835-2380301 1467_na     488_aa scrB Sucrose-6-phosphate hydrolase
2075 DS264586.1 GCA_000154225.1_02075 CDS open 2380424-2382265 1842_na     613_aa metG Methionine--tRNA ligase
2076 DS264586.1 GCA_000154225.1_02076 CDS open 2382396-2382953 558_na     185_aa pncA Nicotinamidasepyrazinamidase
2077 DS264586.1 GCA_000154225.1_02077 CDS open 2382972-2383877 906_na     301_aa rsmI Ribosomal RNA small subunit methyltransferase I
2078 DS264586.1 GCA_000154225.1_02078 CDS open 2383890-2384747 858_na     285_aa hypothetical protein
2079 DS264586.1 GCA_000154225.1_02079 CDS open 2384744-2385625 882_na     293_aa hypothetical protein
2080 DS264586.1 GCA_000154225.1_02080 CDS open 2385622-2386338 717_na     238_aa mntB_3 Manganese transport system ATP-binding protein MntB
2081 DS264586.1 GCA_000154225.1_02081 CDS open 2386338-2387480 1143_na     380_aa mntA Manganese-binding lipoprotein MntA
2082 DS264586.1 GCA_000154225.1_02082 CDS open 2387585-2389378 1794_na     597_aa pmt putative dolichyl-phosphate-mannose--protein mannosyltransferase
2083 DS264586.1 GCA_000154225.1_02083 CDS open 2389561-2390085 525_na     174_aa hypothetical protein
2084 DS264586.1 rRNA open 2390307-2390417 5S ribosomal RNA
2085 DS264585.1 GCA_000154225.1_02085 CDS open 260-1144 885_na     294_aa alsT_3 Amino-acid carrier protein AlsT
2086 DS264585.1 rRNA open 1481-2160 16S ribosomal RNA (partial)