HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Prevotella bivia (GCA_000177315.1)

Select a Genome:
PROKKA Annotations for GCA_000177315.1
Genome Selected: Prevotella bivia
ContigsBases CDSrRNA tmRNAtRNA
121 2424432 2059 3 1 45
[Table]   [NA Fasta]   [AA Fasta]      [Browser]   [Text]   [Excel]  
Search & Sort all 2119 Records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:5]    |    Number of Records Found: 2119 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 ADFO01000009.1 GCA_000177315.1_02001 CDS open 97982-99010 1029_na     342_aa hypothetical protein
2002 ADFO01000009.1 GCA_000177315.1_02002 CDS open 99007-99885 879_na     292_aa Decaprenyl-phosphate phosphoribosyltransferase
2003 ADFO01000009.1 GCA_000177315.1_02003 CDS open 99885-100481 597_na     198_aa hypothetical protein
2004 ADFO01000009.1 GCA_000177315.1_02004 CDS open 100441-100851 411_na     136_aa hypothetical protein
2005 ADFO01000009.1 GCA_000177315.1_02005 CDS open 100901-102253 1353_na     450_aa hypothetical protein
2006 ADFO01000009.1 GCA_000177315.1_02006 CDS open 102250-103680 1431_na     476_aa hypothetical protein
2007 ADFO01000009.1 GCA_000177315.1_02007 CDS open 103693-104673 981_na     326_aa hypothetical protein
2008 ADFO01000009.1 GCA_000177315.1_02008 CDS open 104646-106091 1446_na     481_aa tuaB Teichuronic acid biosynthesis protein TuaB
2009 ADFO01000009.1 GCA_000177315.1_02009 CDS open 106283-107116 834_na     277_aa hypothetical protein
2010 ADFO01000009.1 GCA_000177315.1_02010 CDS open 107156-107875 720_na     239_aa tarI Ribitol-5-phosphate cytidylyltransferase
2011 ADFO01000009.1 GCA_000177315.1_02011 CDS open 107877-108917 1041_na     346_aa rfbB dTDP-glucose 4%2C6-dehydratase
2012 ADFO01000009.1 GCA_000177315.1_02012 CDS open 108917-109816 900_na     299_aa hypothetical protein
2013 ADFO01000009.1 GCA_000177315.1_02013 CDS open 109951-110403 453_na     150_aa bcp Putative peroxiredoxin bcp
2014 ADFO01000009.1 GCA_000177315.1_02014 CDS open 110458-111249 792_na     263_aa hypothetical protein
2015 ADFO01000009.1 GCA_000177315.1_02015 CDS open 111296-112222 927_na     308_aa hypothetical protein
2016 ADFO01000009.1 GCA_000177315.1_02016 CDS open 112331-113608 1278_na     425_aa hypothetical protein
2017 ADFO01000008.1 GCA_000177315.1_02017 CDS open 246-833 588_na     195_aa hypothetical protein
2018 ADFO01000008.1 GCA_000177315.1_02018 CDS open 1050-1160 111_na     36_aa hypothetical protein
2019 ADFO01000008.1 GCA_000177315.1_02019 CDS open 1343-1618 276_na     91_aa hypothetical protein
2020 ADFO01000008.1 GCA_000177315.1_02020 CDS open 1622-2095 474_na     157_aa hypothetical protein
2021 ADFO01000008.1 GCA_000177315.1_02021 CDS open 2353-3171 819_na     272_aa hypothetical protein
2022 ADFO01000008.1 GCA_000177315.1_02022 CDS open 3318-5096 1779_na     592_aa hypothetical protein
2023 ADFO01000008.1 GCA_000177315.1_02023 CDS open 5273-5737 465_na     154_aa hypothetical protein
2024 ADFO01000008.1 GCA_000177315.1_02024 CDS open 5739-6275 537_na     178_aa hypothetical protein
2025 ADFO01000008.1 GCA_000177315.1_02025 CDS open 6343-7029 687_na     228_aa cutC Copper homeostasis protein CutC
2026 ADFO01000008.1 GCA_000177315.1_02026 CDS open 7265-7774 510_na     169_aa hypothetical protein
2027 ADFO01000008.1 tmRNA open 7850-8246 ssrA transfer-messenger RNA%2C SsrA
2028 ADFO01000007.1 GCA_000177315.1_02028 CDS open 400-714 315_na     104_aa hypothetical protein
2029 ADFO01000006.1 tRNA open 239-312 tRNA-Lys(ctt)
2030 ADFO01000006.1 tRNA open 344-417 tRNA-Lys(ctt)
2031 ADFO01000005.1 GCA_000177315.1_02031 CDS open 93-1391 1299_na     432_aa ltrA_2 Group II intron-encoded protein LtrA
2032 ADFO01000005.1 misc_RNA open 1408-1503 Intron_gpII
2033 ADFO01000004.1 GCA_000177315.1_02033 CDS open 167-2479 2313_na     770_aa hypothetical protein
2034 ADFO01000004.1 GCA_000177315.1_02034 CDS open 2486-3577 1092_na     363_aa ftsH_2 ATP-dependent zinc metalloprotease FtsH
2035 ADFO01000004.1 GCA_000177315.1_02035 CDS open 4682-5749 1068_na     355_aa hypothetical protein
2036 ADFO01000004.1 GCA_000177315.1_02036 CDS open 5746-6456 711_na     236_aa hypothetical protein
2037 ADFO01000004.1 GCA_000177315.1_02037 CDS open 6553-6861 309_na     102_aa hypothetical protein
2038 ADFO01000004.1 GCA_000177315.1_02038 CDS open 6849-8909 2061_na     686_aa hypothetical protein
2039 ADFO01000004.1 GCA_000177315.1_02039 CDS open 8906-9286 381_na     126_aa hypothetical protein
2040 ADFO01000004.1 GCA_000177315.1_02040 CDS open 9286-9609 324_na     107_aa hypothetical protein
2041 ADFO01000004.1 GCA_000177315.1_02041 CDS open 10361-11557 1197_na     398_aa icd Isocitrate dehydrogenase [NADP]
2042 ADFO01000004.1 GCA_000177315.1_02042 CDS open 11609-13861 2253_na     750_aa leuC 3-isopropylmalate dehydratase large subunit
2043 ADFO01000004.1 GCA_000177315.1_02043 CDS open 13897-15753 1857_na     618_aa citG 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase
2044 ADFO01000004.1 GCA_000177315.1_02044 CDS open 15737-16255 519_na     172_aa citX Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
2045 ADFO01000004.1 GCA_000177315.1_02045 CDS open 16274-17815 1542_na     513_aa citF Citrate lyase alpha chain
2046 ADFO01000004.1 GCA_000177315.1_02046 CDS open 17812-18681 870_na     289_aa citE Citrate lyase subunit beta
2047 ADFO01000004.1 GCA_000177315.1_02047 CDS open 18734-19012 279_na     92_aa citD Citrate lyase acyl carrier protein
2048 ADFO01000004.1 GCA_000177315.1_02048 CDS open 19783-20829 1047_na     348_aa aroB 3-dehydroquinate synthase
2049 ADFO01000004.1 GCA_000177315.1_02049 CDS open 20833-21252 420_na     139_aa hslR Heat shock protein 15
2050 ADFO01000004.1 GCA_000177315.1_02050 CDS open 21254-21826 573_na     190_aa pth Peptidyl-tRNA hydrolase
2051 ADFO01000004.1 GCA_000177315.1_02051 CDS open 21859-22452 594_na     197_aa rplY 50S ribosomal protein L25
2052 ADFO01000004.1 GCA_000177315.1_02052 CDS open 22710-23723 1014_na     337_aa nusB Transcription antitermination protein NusB
2053 ADFO01000004.1 GCA_000177315.1_02053 CDS open 23787-24110 324_na     107_aa yajC Sec translocon accessory complex subunit YajC
2054 ADFO01000004.1 GCA_000177315.1_02054 CDS open 24155-25165 1011_na     336_aa hypothetical protein
2055 ADFO01000004.1 GCA_000177315.1_02055 CDS open 25162-25722 561_na     186_aa coaE Dephospho-CoA kinase
2056 ADFO01000004.1 GCA_000177315.1_02056 CDS open 25761-26207 447_na     148_aa hypothetical protein
2057 ADFO01000004.1 GCA_000177315.1_02057 CDS open 26629-27555 927_na     308_aa oxyR Hydrogen peroxide-inducible genes activator
2058 ADFO01000004.1 GCA_000177315.1_02058 CDS open 27765-28448 684_na     227_aa sodB Superoxide dismutase [MnFe]
2059 ADFO01000004.1 GCA_000177315.1_02059 CDS open 28498-29064 567_na     188_aa ahpC Alkyl hydroperoxide reductase C
2060 ADFO01000004.1 GCA_000177315.1_02060 CDS open 29208-30770 1563_na     520_aa ahpF Alkyl hydroperoxide reductase subunit F
2061 ADFO01000004.1 GCA_000177315.1_02061 CDS open 30946-32919 1974_na     657_aa rho Transcription termination factor Rho
2062 ADFO01000004.1 GCA_000177315.1_02062 CDS open 33167-35389 2223_na     740_aa relA_3 Bifunctional (p)ppGpp synthasehydrolase RelA
2063 ADFO01000004.1 GCA_000177315.1_02063 CDS open 35477-36439 963_na     320_aa yrbG Inner membrane protein YrbG
2064 ADFO01000004.1 GCA_000177315.1_02064 CDS open 36969-38030 1062_na     353_aa hypothetical protein
2065 ADFO01000004.1 GCA_000177315.1_02065 CDS open 38020-38445 426_na     141_aa hypothetical protein
2066 ADFO01000004.1 GCA_000177315.1_02066 CDS open 38808-39266 459_na     152_aa hypothetical protein
2067 ADFO01000004.1 GCA_000177315.1_02067 CDS open 39271-40275 1005_na     334_aa dnaG_3 DNA primase
2068 ADFO01000004.1 GCA_000177315.1_02068 CDS open 40469-41821 1353_na     450_aa hypothetical protein
2069 ADFO01000004.1 GCA_000177315.1_02069 CDS open 42276-42563 288_na     95_aa hypothetical protein
2070 ADFO01000004.1 GCA_000177315.1_02070 CDS open 42576-42857 282_na     93_aa hypothetical protein
2071 ADFO01000004.1 GCA_000177315.1_02071 CDS open 43156-44391 1236_na     411_aa hypothetical protein
2072 ADFO01000004.1 GCA_000177315.1_02072 CDS open 44400-44861 462_na     153_aa hypothetical protein
2073 ADFO01000004.1 GCA_000177315.1_02073 CDS open 44858-46099 1242_na     413_aa hypothetical protein
2074 ADFO01000004.1 GCA_000177315.1_02074 CDS open 46392-46808 417_na     138_aa hypothetical protein
2075 ADFO01000003.1 GCA_000177315.1_02075 CDS open 30-854 825_na     274_aa hypothetical protein
2076 ADFO01000003.1 GCA_000177315.1_02076 CDS open 1005-2174 1170_na     389_aa hypothetical protein
2077 ADFO01000003.1 GCA_000177315.1_02077 CDS open 2198-2902 705_na     234_aa hypothetical protein
2078 ADFO01000003.1 GCA_000177315.1_02078 CDS open 3299-4162 864_na     287_aa hypothetical protein
2079 ADFO01000003.1 GCA_000177315.1_02079 CDS open 4427-6712 2286_na     761_aa hypothetical protein
2080 ADFO01000003.1 GCA_000177315.1_02080 CDS open 6790-7539 750_na     249_aa hypothetical protein
2081 ADFO01000003.1 GCA_000177315.1_02081 CDS open 7624-9660 2037_na     678_aa ligA DNA ligase
2082 ADFO01000003.1 GCA_000177315.1_02082 CDS open 9670-10074 405_na     134_aa nudG CTP pyrophosphohydrolase
2083 ADFO01000003.1 GCA_000177315.1_02083 CDS open 10219-11604 1386_na     461_aa nhaD Na(+)H(+) antiporter NhaD
2084 ADFO01000003.1 GCA_000177315.1_02084 CDS open 11733-12941 1209_na     402_aa hypothetical protein
2085 ADFO01000003.1 GCA_000177315.1_02085 CDS open 12983-15109 2127_na     708_aa btuB_10 Vitamin B12 transporter BtuB
2086 ADFO01000003.1 misc_RNA open 15124-15374 Cobalamin
2087 ADFO01000003.1 GCA_000177315.1_02087 CDS open 16240-16980 741_na     246_aa hypothetical protein
2088 ADFO01000003.1 GCA_000177315.1_02088 CDS open 17448-19001 1554_na     517_aa hypothetical protein
2089 ADFO01000003.1 GCA_000177315.1_02089 CDS open 19006-19308 303_na     100_aa hypothetical protein
2090 ADFO01000003.1 GCA_000177315.1_02090 CDS open 20321-21607 1287_na     428_aa maeB NADP-dependent malic enzyme
2091 ADFO01000003.1 GCA_000177315.1_02091 CDS open 21804-23204 1401_na     466_aa hypothetical protein
2092 ADFO01000003.1 GCA_000177315.1_02092 CDS open 23235-24782 1548_na     515_aa hypothetical protein
2093 ADFO01000003.1 GCA_000177315.1_02093 CDS open 24964-27024 2061_na     686_aa hypothetical protein
2094 ADFO01000003.1 GCA_000177315.1_02094 CDS open 27072-30461 3390_na     1129_aa recB RecBCD enzyme subunit RecB
2095 ADFO01000003.1 GCA_000177315.1_02095 CDS open 30483-33377 2895_na     964_aa hypothetical protein
2096 ADFO01000003.1 GCA_000177315.1_02096 CDS open 33488-33763 276_na     91_aa rpsO 30S ribosomal protein S15
2097 ADFO01000003.1 GCA_000177315.1_02097 CDS open 33972-35774 1803_na     600_aa typA GTP-binding protein TypABipA
2098 ADFO01000003.1 GCA_000177315.1_02098 CDS open 36031-36705 675_na     224_aa hypothetical protein
2099 ADFO01000003.1 GCA_000177315.1_02099 CDS open 36727-38874 2148_na     715_aa yhgF Protein YhgF
2100 ADFO01000003.1 GCA_000177315.1_02100 CDS open 39022-41007 1986_na     661_aa yheS putative ABC transporter ATP-binding protein YheS
2101 ADFO01000003.1 GCA_000177315.1_02101 CDS open 41104-43137 2034_na     677_aa pepO Neutral endopeptidase
2102 ADFO01000003.1 GCA_000177315.1_02102 CDS open 43396-44268 873_na     290_aa sucD Succinate--CoA ligase [ADP-forming] subunit alpha
2103 ADFO01000003.1 GCA_000177315.1_02103 CDS open 44288-45421 1134_na     377_aa sucC Succinate--CoA ligase [ADP-forming] subunit beta
2104 ADFO01000003.1 GCA_000177315.1_02104 CDS open 45457-46521 1065_na     354_aa buk2 Butyrate kinase 2
2105 ADFO01000003.1 GCA_000177315.1_02105 CDS open 46511-47434 924_na     307_aa pta_2 Phosphate acetyltransferase
2106 ADFO01000003.1 GCA_000177315.1_02106 CDS open 47580-48890 1311_na     436_aa hypothetical protein
2107 ADFO01000002.1 GCA_000177315.1_02107 CDS open 80-1099 1020_na     339_aa hypothetical protein
2108 ADFO01000002.1 GCA_000177315.1_02108 CDS open 1183-2190 1008_na     335_aa hypothetical protein
2109 ADFO01000002.1 GCA_000177315.1_02109 CDS open 2183-2788 606_na     201_aa hypothetical protein
2110 ADFO01000002.1 GCA_000177315.1_02110 CDS open 3199-3312 114_na     37_aa hypothetical protein
2111 ADFO01000002.1 GCA_000177315.1_02111 CDS open 3300-3554 255_na     84_aa hypothetical protein
2112 ADFO01000002.1 GCA_000177315.1_02112 CDS open 3570-3905 336_na     111_aa hypothetical protein
2113 ADFO01000002.1 GCA_000177315.1_02113 CDS open 4116-4343 228_na     75_aa hypothetical protein
2114 ADFO01000002.1 GCA_000177315.1_02114 CDS open 4362-6029 1668_na     555_aa hypothetical protein
2115 ADFO01000002.1 GCA_000177315.1_02115 CDS open 6104-6409 306_na     101_aa hypothetical protein
2116 ADFO01000002.1 GCA_000177315.1_02116 CDS open 6397-8457 2061_na     686_aa hypothetical protein
2117 ADFO01000002.1 GCA_000177315.1_02117 CDS open 8454-8849 396_na     131_aa hypothetical protein
2118 ADFO01000002.1 GCA_000177315.1_02118 CDS open 8833-9306 474_na     157_aa hypothetical protein
2119 ADFO01000001.1 GCA_000177315.1_02119 CDS open 132-479 348_na     115_aa hypothetical protein