HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Schaalia sp. HMT-180 (GCA_000185285.1)

Select a Genome:
PROKKA Annotations for GCA_000185285.1
Genome Selected: Schaalia sp. HMT-180
ContigsBases CDSrRNA tmRNAtRNA
6 2,372,658 2016 3 1 50
[Table]   [NA Fasta]   [AA Fasta]      [Browser]   [Text]   [Excel]  
Search & Sort all 2080 Records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:5]    |    Number of Records Found: 2080 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 GL622194.1 GCA_000185285.1_02001 CDS open 2271690-2272154 465_na     154_aa hypothetical protein
2002 GL622194.1 GCA_000185285.1_02002 CDS open 2272276-2272593 318_na     105_aa hypothetical protein
2003 GL622194.1 GCA_000185285.1_02003 CDS open 2272944-2279468 6525_na     2174_aa hypothetical protein
2004 GL622194.1 GCA_000185285.1_02004 CDS open 2280023-2283217 3195_na     1064_aa hypothetical protein
2005 GL622194.1 GCA_000185285.1_02005 CDS open 2284278-2284634 357_na     118_aa hypothetical protein
2006 GL622194.1 GCA_000185285.1_02006 CDS open 2284713-2284850 138_na     45_aa hypothetical protein
2007 GL622194.1 GCA_000185285.1_02007 CDS open 2284992-2285432 441_na     146_aa hypothetical protein
2008 GL622194.1 GCA_000185285.1_02008 CDS open 2286053-2286334 282_na     93_aa hup DNA-binding protein HB1
2009 GL622194.1 GCA_000185285.1_02009 CDS open 2286493-2288568 2076_na     691_aa putative ABC transporter ATP-binding protein
2010 GL622194.1 GCA_000185285.1_02010 CDS open 2288579-2289478 900_na     299_aa dppC Dipeptide transport system permease protein DppC
2011 GL622194.1 GCA_000185285.1_02011 CDS open 2289475-2290434 960_na     319_aa dppB_2 Dipeptide transport system permease protein DppB
2012 GL622194.1 GCA_000185285.1_02012 CDS open 2290512-2292311 1800_na     599_aa hypothetical protein
2013 GL622194.1 GCA_000185285.1_02013 CDS open 2292562-2293710 1149_na     382_aa nagC_2 N-acetylglucosamine repressor
2014 GL622194.1 GCA_000185285.1_02014 CDS open 2293707-2295164 1458_na     485_aa hypothetical protein
2015 GL622194.1 GCA_000185285.1_02015 CDS open 2295161-2296093 933_na     310_aa glcK Glucokinase
2016 GL622194.1 GCA_000185285.1_02016 CDS open 2296090-2296767 678_na     225_aa cutC Copper homeostasis protein CutC
2017 GL622194.1 GCA_000185285.1_02017 CDS open 2296838-2297611 774_na     257_aa nagB Glucosamine-6-phosphate deaminase
2018 GL622194.1 GCA_000185285.1_02018 CDS open 2297737-2298060 324_na     107_aa hypothetical protein
2019 GL622194.1 GCA_000185285.1_02019 CDS open 2298057-2299796 1740_na     579_aa hypothetical protein
2020 GL622194.1 GCA_000185285.1_02020 CDS open 2299819-2301111 1293_na     430_aa pncB1 Nicotinate phosphoribosyltransferase pncB1
2021 GL622194.1 GCA_000185285.1_02021 CDS open 2301245-2301532 288_na     95_aa clpS ATP-dependent Clp protease adapter protein ClpS
2022 GL622194.1 GCA_000185285.1_02022 CDS open 2301537-2302109 573_na     190_aa hypothetical protein
2023 GL622194.1 GCA_000185285.1_02023 CDS open 2302126-2302956 831_na     276_aa murI Glutamate racemase
2024 GL622194.1 GCA_000185285.1_02024 CDS open 2302953-2303750 798_na     265_aa putative protein
2025 GL622194.1 GCA_000185285.1_02025 CDS open 2303774-2304688 915_na     304_aa oxyR Hydrogen peroxide-inducible genes activator
2026 GL622194.1 GCA_000185285.1_02026 CDS open 2304775-2305107 333_na     110_aa hypothetical protein
2027 GL622194.1 GCA_000185285.1_02027 CDS open 2305336-2305458 123_na     40_aa hypothetical protein
2028 GL622194.1 GCA_000185285.1_02028 CDS open 2305537-2306151 615_na     204_aa dITPXTP pyrophosphatase
2029 GL622194.1 GCA_000185285.1_02029 CDS open 2306148-2306915 768_na     255_aa rph Ribonuclease PH
2030 GL622194.1 GCA_000185285.1_02030 CDS open 2306952-2307896 945_na     314_aa nudC NADH pyrophosphatase
2031 GL622194.1 GCA_000185285.1_02031 CDS open 2307912-2309924 2013_na     670_aa uvrD2 ATP-dependent DNA helicase UvrD2
2032 GL622194.1 GCA_000185285.1_02032 CDS open 2309932-2310810 879_na     292_aa hypothetical protein
2033 GL622194.1 GCA_000185285.1_02033 CDS open 2310906-2312384 1479_na     492_aa hypothetical protein
2034 GL622194.1 GCA_000185285.1_02034 CDS open 2312477-2313700 1224_na     407_aa ylbL putative protein YlbL
2035 GL622194.1 GCA_000185285.1_02035 CDS open 2313794-2314348 555_na     184_aa hypothetical protein
2036 GL622194.1 GCA_000185285.1_02036 CDS open 2314461-2317565 3105_na     1034_aa hypothetical protein
2037 GL622194.1 GCA_000185285.1_02037 CDS open 2317609-2318349 741_na     246_aa hypothetical protein
2038 GL622194.1 tRNA open 2318458-2318534 tRNA-Met(cat)
2039 GL622194.1 GCA_000185285.1_02039 CDS open 2318682-2320652 1971_na     656_aa hypothetical protein
2040 GL622194.1 GCA_000185285.1_02040 CDS open 2320726-2321418 693_na     230_aa hypothetical protein
2041 GL622194.1 GCA_000185285.1_02041 CDS open 2321615-2323117 1503_na     500_aa lysP Lysine-specific permease
2042 GL622194.1 GCA_000185285.1_02042 CDS open 2323226-2323858 633_na     210_aa hypothetical protein
2043 GL622194.1 GCA_000185285.1_02043 CDS open 2324079-2324429 351_na     116_aa hypothetical protein
2044 GL622194.1 GCA_000185285.1_02044 CDS open 2324596-2325336 741_na     246_aa hypothetical protein
2045 GL622194.1 GCA_000185285.1_02045 CDS open 2327287-2327592 306_na     101_aa hypothetical protein
2046 GL622194.1 GCA_000185285.1_02046 CDS open 2328033-2328350 318_na     105_aa hypothetical protein
2047 GL622194.1 GCA_000185285.1_02047 CDS open 2328448-2328999 552_na     183_aa ywrO General stress protein 14
2048 GL622194.1 GCA_000185285.1_02048 CDS open 2329239-2331344 2106_na     701_aa hypothetical protein
2049 GL622194.1 GCA_000185285.1_02049 CDS open 2331474-2332244 771_na     256_aa hypothetical protein
2050 GL622194.1 GCA_000185285.1_02050 CDS open 2332220-2333185 966_na     321_aa hypothetical protein
2051 GL622194.1 GCA_000185285.1_02051 CDS open 2333288-2333425 138_na     45_aa hypothetical protein
2052 GL622194.1 GCA_000185285.1_02052 CDS open 2333958-2335160 1203_na     400_aa hypothetical protein
2053 GL622194.1 GCA_000185285.1_02053 CDS open 2335163-2337148 1986_na     661_aa hypothetical protein
2054 GL622194.1 GCA_000185285.1_02054 CDS open 2337145-2339901 2757_na     918_aa hypothetical protein
2055 GL622194.1 GCA_000185285.1_02055 CDS open 2340137-2340679 543_na     180_aa hypothetical protein
2056 GL622194.1 GCA_000185285.1_02056 CDS open 2340923-2341234 312_na     103_aa hypothetical protein
2057 GL622194.1 GCA_000185285.1_02057 CDS open 2341334-2341882 549_na     182_aa hypothetical protein
2058 GL622194.1 GCA_000185285.1_02058 CDS open 2342018-2342818 801_na     266_aa hypothetical protein
2059 GL622194.1 GCA_000185285.1_02059 CDS open 2343278-2344687 1410_na     469_aa fumC Fumarate hydratase class II
2060 GL622194.1 GCA_000185285.1_02060 CDS open 2344765-2346087 1323_na     440_aa hypothetical protein
2061 GL622194.1 GCA_000185285.1_02061 CDS open 2346171-2346704 534_na     177_aa folA Dihydrofolate reductase
2062 GL622194.1 GCA_000185285.1_02062 CDS open 2346701-2347504 804_na     267_aa thyA Thymidylate synthase
2063 GL622194.1 GCA_000185285.1_02063 CDS open 2347506-2347940 435_na     144_aa putative protein
2064 GL622194.1 GCA_000185285.1_02064 CDS open 2348013-2348495 483_na     160_aa hypothetical protein
2065 GL622194.1 GCA_000185285.1_02065 CDS open 2348595-2350055 1461_na     486_aa pdtaS putative sensor histidine kinase pdtaS
2066 GL622194.1 GCA_000185285.1_02066 CDS open 2350151-2350405 255_na     84_aa whiB1 Transcriptional regulator WhiB1
2067 GL622194.1 GCA_000185285.1_02067 CDS open 2350551-2353592 3042_na     1013_aa hypothetical protein
2068 GL622194.1 GCA_000185285.1_02068 CDS open 2353765-2356098 2334_na     777_aa ligA DNA ligase A
2069 GL622194.1 GCA_000185285.1_02069 CDS open 2356110-2357375 1266_na     421_aa clsA_2 Major cardiolipin synthase ClsA
2070 GL622194.1 GCA_000185285.1_02070 CDS open 2357394-2357690 297_na     98_aa gatC Glutamyl-tRNA(Gln) amidotransferase subunit C
2071 GL622194.1 GCA_000185285.1_02071 CDS open 2357690-2359195 1506_na     501_aa gatA Glutamyl-tRNA(Gln) amidotransferase subunit A
2072 GL622194.1 GCA_000185285.1_02072 CDS open 2359195-2360691 1497_na     498_aa gatB Aspartylglutamyl-tRNA(AsnGln) amidotransferase subunit B
2073 GL622194.1 GCA_000185285.1_02073 CDS open 2360945-2362372 1428_na     475_aa NAD-dependent malic enzyme
2074 GL622195.1 rRNA open 143-1679 16S ribosomal RNA
2075 GL622195.1 rRNA open 2014-5125 23S ribosomal RNA
2076 GL622195.1 rRNA open 5290-5399 5S ribosomal RNA
2077 GL622196.1 GCA_000185285.1_02077 CDS open 5-1093 1089_na     362_aa ISL3 family transposase ISPfr2
2078 GL622197.1 GCA_000185285.1_02078 CDS open 4-1308 1305_na     434_aa ISL3 family transposase ISPfr4
2079 GL622198.1 GCA_000185285.1_02079 CDS open 281-1051 771_na     256_aa hypothetical protein
2080 GL622199.1 GCA_000185285.1_02080 CDS open 77-688 612_na     203_aa hypothetical protein