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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Lacticaseibacillus paracasei (GCA_000194765.1)

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PROKKA Annotations for GCA_000194765.1
Genome Selected: Lacticaseibacillus paracasei
ContigsBases CDSrRNA tmRNAtRNA
2 3127288 3066 15 1 60
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Annotation Table [page:7]    |    Number of Records Found: 3175 [7 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
3001 CP002618.1 GCA_000194765.1_03001 CDS open 2970432-2970896 465_na     154_aa rppH_2 RNA pyrophosphohydrolase
3002 CP002618.1 GCA_000194765.1_03002 CDS open 2970893-2971414 522_na     173_aa hypothetical protein
3003 CP002618.1 GCA_000194765.1_03003 CDS open 2971847-2972470 624_na     207_aa ycaC putative hydrolase YcaC
3004 CP002618.1 GCA_000194765.1_03004 CDS open 2972731-2974152 1422_na     473_aa ribZ_7 Riboflavin transporter RibZ
3005 CP002618.1 GCA_000194765.1_03005 CDS open 2974430-2975623 1194_na     397_aa yycB putative transporter YycB
3006 CP002618.1 GCA_000194765.1_03006 CDS open 2975684-2976613 930_na     309_aa iolS_2 Aldo-keto reductase IolS
3007 CP002618.1 GCA_000194765.1_03007 CDS open 2976739-2977104 366_na     121_aa hypothetical protein
3008 CP002618.1 GCA_000194765.1_03008 CDS open 2977366-2978277 912_na     303_aa manZ_12 PTS system mannose-specific EIID component
3009 CP002618.1 GCA_000194765.1_03009 CDS open 2978295-2979110 816_na     271_aa sorA_2 PTS system sorbose-specific EIIC component
3010 CP002618.1 GCA_000194765.1_03010 CDS open 2979138-2980112 975_na     324_aa manX_7 PTS system mannose-specific EIIAB component
3011 CP002618.1 GCA_000194765.1_03011 CDS open 2980347-2981618 1272_na     423_aa hypothetical protein
3012 CP002618.1 GCA_000194765.1_03012 CDS open 2981855-2982874 1020_na     339_aa hypothetical protein
3013 CP002618.1 GCA_000194765.1_03013 CDS open 2983041-2983889 849_na     282_aa hypothetical protein
3014 CP002618.1 GCA_000194765.1_03014 CDS open 2983886-2984761 876_na     291_aa hypothetical protein
3015 CP002618.1 misc_RNA open 2985188-2985360 Lysine
3016 CP002618.1 GCA_000194765.1_03016 CDS open 2985207-2985368 162_na     53_aa hypothetical protein
3017 CP002618.1 GCA_000194765.1_03017 CDS open 2985464-2987071 1608_na     535_aa hypothetical protein
3018 CP002618.1 GCA_000194765.1_03018 CDS open 2987075-2987821 747_na     248_aa artM Arginine transport ATP-binding protein ArtM
3019 CP002618.1 GCA_000194765.1_03019 CDS open 2988181-2988435 255_na     84_aa hypothetical protein
3020 CP002618.1 GCA_000194765.1_03020 CDS open 2988461-2989732 1272_na     423_aa hypothetical protein
3021 CP002618.1 GCA_000194765.1_03021 CDS open 2989916-2990626 711_na     236_aa hypothetical protein
3022 CP002618.1 GCA_000194765.1_03022 CDS open 2990821-2991036 216_na     71_aa hypothetical protein
3023 CP002618.1 GCA_000194765.1_03023 CDS open 2991194-2991517 324_na     107_aa hypothetical protein
3024 CP002618.1 GCA_000194765.1_03024 CDS open 2991699-2992172 474_na     157_aa hypothetical protein
3025 CP002618.1 GCA_000194765.1_03025 CDS open 2992162-2993727 1566_na     521_aa hypothetical protein
3026 CP002618.1 GCA_000194765.1_03026 CDS open 2993717-2994493 777_na     258_aa hypothetical protein
3027 CP002618.1 GCA_000194765.1_03027 CDS open 2994591-2995460 870_na     289_aa putative ketoamine kinase
3028 CP002618.1 GCA_000194765.1_03028 CDS open 2995577-2996317 741_na     246_aa glnQ_4 Glutamine transport ATP-binding protein GlnQ
3029 CP002618.1 GCA_000194765.1_03029 CDS open 2996314-2997780 1467_na     488_aa mltF_3 Membrane-bound lytic murein transglycosylase F
3030 CP002618.1 GCA_000194765.1_03030 CDS open 2997967-2999427 1461_na     486_aa mltF_4 Membrane-bound lytic murein transglycosylase F
3031 CP002618.1 GCA_000194765.1_03031 CDS open 2999635-3000183 549_na     182_aa ydaF Putative ribosomal N-acetyltransferase YdaF
3032 CP002618.1 GCA_000194765.1_03032 CDS open 3000291-3000914 624_na     207_aa hypothetical protein
3033 CP002618.1 GCA_000194765.1_03033 CDS open 3001280-3001696 417_na     138_aa hypothetical protein
3034 CP002618.1 GCA_000194765.1_03034 CDS open 3001714-3002214 501_na     166_aa hypothetical protein
3035 CP002618.1 GCA_000194765.1_03035 CDS open 3002219-3003211 993_na     330_aa hypothetical protein
3036 CP002618.1 GCA_000194765.1_03036 CDS open 3003204-3003677 474_na     157_aa hypothetical protein
3037 CP002618.1 GCA_000194765.1_03037 CDS open 3003620-3005365 1746_na     581_aa hypothetical protein
3038 CP002618.1 GCA_000194765.1_03038 CDS open 3005845-3006954 1110_na     369_aa mshA D-inositol-3-phosphate glycosyltransferase
3039 CP002618.1 GCA_000194765.1_03039 CDS open 3007120-3007767 648_na     215_aa maa Maltose O-acetyltransferase
3040 CP002618.1 GCA_000194765.1_03040 CDS open 3007790-3008584 795_na     264_aa ybjI 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YbjI
3041 CP002618.1 GCA_000194765.1_03041 CDS open 3008724-3010118 1395_na     464_aa aspA Aspartate ammonia-lyase
3042 CP002618.1 GCA_000194765.1_03042 CDS open 3010273-3010857 585_na     194_aa hypothetical protein
3043 CP002618.1 GCA_000194765.1_03043 CDS open 3010970-3011389 420_na     139_aa hypothetical protein
3044 CP002618.1 misc_RNA open 3011405-3011502 yjdF
3045 CP002618.1 GCA_000194765.1_03045 CDS open 3012049-3013227 1179_na     392_aa NAD-dependent malic enzyme
3046 CP002618.1 GCA_000194765.1_03046 CDS open 3013420-3014745 1326_na     441_aa cimH Citratemalate transporter
3047 CP002618.1 GCA_000194765.1_03047 CDS open 3014898-3016442 1545_na     514_aa dcuS Sensor histidine kinase DcuS
3048 CP002618.1 GCA_000194765.1_03048 CDS open 3016420-3017109 690_na     229_aa dcuR Transcriptional regulatory protein DcuR
3049 CP002618.1 GCA_000194765.1_03049 CDS open 3017364-3018221 858_na     285_aa 3-sulfolactaldehyde reductase
3050 CP002618.1 GCA_000194765.1_03050 CDS open 3018479-3018988 510_na     169_aa hypothetical protein
3051 CP002618.1 GCA_000194765.1_03051 CDS open 3019108-3019506 399_na     132_aa hypothetical protein
3052 CP002618.1 GCA_000194765.1_03052 CDS open 3019697-3020995 1299_na     432_aa putative transporter
3053 CP002618.1 GCA_000194765.1_03053 CDS open 3021076-3022005 930_na     309_aa hypothetical protein
3054 CP002618.1 GCA_000194765.1_03054 CDS open 3022348-3023217 870_na     289_aa Int-Tn Transposase from transposon Tn916
3055 CP002618.1 GCA_000194765.1_03055 CDS open 3023247-3023504 258_na     85_aa hypothetical protein
3056 CP002618.1 GCA_000194765.1_03056 CDS open 3023617-3024255 639_na     212_aa hypothetical protein
3057 CP002618.1 GCA_000194765.1_03057 CDS open 3024423-3024698 276_na     91_aa hypothetical protein
3058 CP002618.1 GCA_000194765.1_03058 CDS open 3024766-3024987 222_na     73_aa hypothetical protein
3059 CP002618.1 GCA_000194765.1_03059 CDS open 3024980-3025117 138_na     45_aa hypothetical protein
3060 CP002618.1 GCA_000194765.1_03060 CDS open 3025098-3025289 192_na     63_aa hypothetical protein
3061 CP002618.1 GCA_000194765.1_03061 CDS open 3025336-3025626 291_na     96_aa hypothetical protein
3062 CP002618.1 GCA_000194765.1_03062 CDS open 3025626-3025811 186_na     61_aa hypothetical protein
3063 CP002618.1 GCA_000194765.1_03063 CDS open 3025795-3026607 813_na     270_aa hypothetical protein
3064 CP002618.1 GCA_000194765.1_03064 CDS open 3026620-3028206 1587_na     528_aa hypothetical protein
3065 CP002618.1 GCA_000194765.1_03065 CDS open 3028532-3028867 336_na     111_aa hypothetical protein
3066 CP002618.1 GCA_000194765.1_03066 CDS open 3028872-3029057 186_na     61_aa hypothetical protein
3067 CP002618.1 GCA_000194765.1_03067 CDS open 3029054-3029476 423_na     140_aa hypothetical protein
3068 CP002618.1 GCA_000194765.1_03068 CDS open 3029593-3030063 471_na     156_aa hypothetical protein
3069 CP002618.1 GCA_000194765.1_03069 CDS open 3030060-3031763 1704_na     567_aa hypothetical protein
3070 CP002618.1 GCA_000194765.1_03070 CDS open 3031729-3031908 180_na     59_aa hypothetical protein
3071 CP002618.1 GCA_000194765.1_03071 CDS open 3031913-3033094 1182_na     393_aa hypothetical protein
3072 CP002618.1 GCA_000194765.1_03072 CDS open 3033081-3034637 1557_na     518_aa hypothetical protein
3073 CP002618.1 GCA_000194765.1_03073 CDS open 3034692-3034985 294_na     97_aa hypothetical protein
3074 CP002618.1 GCA_000194765.1_03074 CDS open 3035443-3035583 141_na     46_aa hypothetical protein
3075 CP002618.1 GCA_000194765.1_03075 CDS open 3035599-3035847 249_na     82_aa hypothetical protein
3076 CP002618.1 tRNA open 3036096-3036170 tRNA-Lys(ctt)
3077 CP002618.1 GCA_000194765.1_03077 CDS open 3036539-3037459 921_na     306_aa prs_2 Ribose-phosphate pyrophosphokinase
3078 CP002618.1 GCA_000194765.1_03078 CDS open 3037659-3038588 930_na     309_aa hypothetical protein
3079 CP002618.1 GCA_000194765.1_03079 CDS open 3038686-3039642 957_na     318_aa hypothetical protein
3080 CP002618.1 GCA_000194765.1_03080 CDS open 3039760-3040914 1155_na     384_aa mtlD_3 Mannitol-1-phosphate 5-dehydrogenase
3081 CP002618.1 GCA_000194765.1_03081 CDS open 3040918-3041361 444_na     147_aa mtlF Mannitol-specific phosphotransferase enzyme IIA component
3082 CP002618.1 GCA_000194765.1_03082 CDS open 3041366-3043423 2058_na     685_aa mtlR Transcriptional regulator MtlR
3083 CP002618.1 GCA_000194765.1_03083 CDS open 3043460-3045286 1827_na     608_aa hypothetical protein
3084 CP002618.1 GCA_000194765.1_03084 CDS open 3045688-3046398 711_na     236_aa nagB Glucosamine-6-phosphate deaminase
3085 CP002618.1 GCA_000194765.1_03085 CDS open 3046696-3047481 786_na     261_aa Putative bifunctional phosphatasepeptidyl-prolyl cis-trans isomerase
3086 CP002618.1 GCA_000194765.1_03086 CDS open 3047824-3048084 261_na     86_aa hypothetical protein
3087 CP002618.1 GCA_000194765.1_03087 CDS open 3048095-3048271 177_na     58_aa hypothetical protein
3088 CP002618.1 GCA_000194765.1_03088 CDS open 3048842-3049906 1065_na     354_aa hypothetical protein
3089 CP002618.1 GCA_000194765.1_03089 CDS open 3049899-3050588 690_na     229_aa yknY putative ABC transporter ATP-binding protein YknY
3090 CP002618.1 GCA_000194765.1_03090 CDS open 3050575-3051765 1191_na     396_aa macB Macrolide export ATP-bindingpermease protein MacB
3091 CP002618.1 GCA_000194765.1_03091 CDS open 3051922-3053940 2019_na     672_aa hypothetical protein
3092 CP002618.1 GCA_000194765.1_03092 CDS open 3053965-3057882 3918_na     1305_aa hypothetical protein
3093 CP002618.1 GCA_000194765.1_03093 CDS open 3058524-3059609 1086_na     361_aa hcxA Hydroxycarboxylate dehydrogenase A
3094 CP002618.1 GCA_000194765.1_03094 CDS open 3059753-3060952 1200_na     399_aa scmP N-acetylcysteine deacetylase
3095 CP002618.1 GCA_000194765.1_03095 CDS open 3060949-3061437 489_na     162_aa hypothetical protein
3096 CP002618.1 GCA_000194765.1_03096 CDS open 3061439-3062203 765_na     254_aa hypothetical protein
3097 CP002618.1 GCA_000194765.1_03097 CDS open 3062365-3062574 210_na     69_aa hypothetical protein
3098 CP002618.1 GCA_000194765.1_03098 CDS open 3062837-3064738 1902_na     633_aa mnmG tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
3099 CP002618.1 GCA_000194765.1_03099 CDS open 3064780-3066168 1389_na     462_aa mnmE tRNA modification GTPase MnmE
3100 CP002618.1 GCA_000194765.1_03100 CDS open 3066270-3066473 204_na     67_aa hypothetical protein
3101 CP002618.1 GCA_000194765.1_03101 CDS open 3066610-3067374 765_na     254_aa hypothetical protein
3102 CP002618.1 GCA_000194765.1_03102 CDS open 3067392-3068228 837_na     278_aa misCA Membrane protein insertase MisCA
3103 CP002618.1 GCA_000194765.1_03103 CDS open 3068373-3068897 525_na     174_aa rnpA Ribonuclease P protein component
3104 CP002618.1 GCA_000194765.1_03104 CDS open 3069058-3069198 141_na     46_aa rpmH 50S ribosomal protein L34
3105 CP002619.1 misc_RNA open 343-528 rli28
3106 CP002619.1 GCA_000194765.1_03106 CDS open 781-2172 1392_na     463_aa hypothetical protein
3107 CP002619.1 GCA_000194765.1_03107 CDS open 2217-4424 2208_na     735_aa hypothetical protein
3108 CP002619.1 GCA_000194765.1_03108 CDS open 4396-4797 402_na     133_aa hypothetical protein
3109 CP002619.1 GCA_000194765.1_03109 CDS open 4794-5042 249_na     82_aa hypothetical protein
3110 CP002619.1 GCA_000194765.1_03110 CDS open 5039-5314 276_na     91_aa hypothetical protein
3111 CP002619.1 GCA_000194765.1_03111 CDS open 5402-6376 975_na     324_aa hypothetical protein
3112 CP002619.1 GCA_000194765.1_03112 CDS open 6394-7539 1146_na     381_aa hypothetical protein
3113 CP002619.1 GCA_000194765.1_03113 CDS open 7575-7805 231_na     76_aa hypothetical protein
3114 CP002619.1 GCA_000194765.1_03114 CDS open 7823-8347 525_na     174_aa hypothetical protein
3115 CP002619.1 GCA_000194765.1_03115 CDS open 8361-10838 2478_na     825_aa hypothetical protein
3116 CP002619.1 GCA_000194765.1_03116 CDS open 10828-13284 2457_na     818_aa hypothetical protein
3117 CP002619.1 GCA_000194765.1_03117 CDS open 13232-13603 372_na     123_aa hypothetical protein
3118 CP002619.1 GCA_000194765.1_03118 CDS open 13621-14454 834_na     277_aa hypothetical protein
3119 CP002619.1 GCA_000194765.1_03119 CDS open 14474-14680 207_na     68_aa hypothetical protein
3120 CP002619.1 GCA_000194765.1_03120 CDS open 14698-16593 1896_na     631_aa hypothetical protein
3121 CP002619.1 GCA_000194765.1_03121 CDS open 16593-17069 477_na     158_aa hypothetical protein
3122 CP002619.1 GCA_000194765.1_03122 CDS open 17088-18611 1524_na     507_aa hypothetical protein
3123 CP002619.1 GCA_000194765.1_03123 CDS open 18635-18901 267_na     88_aa hypothetical protein
3124 CP002619.1 GCA_000194765.1_03124 CDS open 18913-19191 279_na     92_aa hypothetical protein
3125 CP002619.1 GCA_000194765.1_03125 CDS open 19400-19558 159_na     52_aa hypothetical protein
3126 CP002619.1 GCA_000194765.1_03126 CDS open 19571-19759 189_na     62_aa hypothetical protein
3127 CP002619.1 GCA_000194765.1_03127 CDS open 19848-20531 684_na     227_aa IS6 family transposase ISLmo3
3128 CP002619.1 GCA_000194765.1_03128 CDS open 20606-21346 741_na     246_aa larB Pyridinium-3%2C5-biscarboxylic acid mononucleotide synthase
3129 CP002619.1 GCA_000194765.1_03129 CDS open 21377-22168 792_na     263_aa larC_1 Pyridinium-3%2C5-bisthiocarboxylic acid mononucleotide nickel insertion protein
3130 CP002619.1 GCA_000194765.1_03130 CDS open 22207-22638 432_na     143_aa larC_2 Pyridinium-3%2C5-bisthiocarboxylic acid mononucleotide nickel insertion protein
3131 CP002619.1 GCA_000194765.1_03131 CDS open 22643-23359 717_na     238_aa larD DL-lactic acid transporter
3132 CP002619.1 GCA_000194765.1_03132 CDS open 23384-24214 831_na     276_aa larE Pyridinium-3%2C5-bisthiocarboxylic acid mononucleotide synthase
3133 CP002619.1 GCA_000194765.1_03133 CDS open 24551-25234 684_na     227_aa IS6 family transposase ISLmo3
3134 CP002619.1 GCA_000194765.1_03134 CDS open 25294-26217 924_na     307_aa hypothetical protein
3135 CP002619.1 GCA_000194765.1_03135 CDS open 26223-26582 360_na     119_aa hypothetical protein
3136 CP002619.1 GCA_000194765.1_03136 CDS open 26590-27060 471_na     156_aa IS5 family transposase ISCaa8
3137 CP002619.1 GCA_000194765.1_03137 CDS open 27050-27376 327_na     108_aa hypothetical protein
3138 CP002619.1 GCA_000194765.1_03138 CDS open 27444-28070 627_na     208_aa hypothetical protein
3139 CP002619.1 GCA_000194765.1_03139 CDS open 28067-29683 1617_na     538_aa hypothetical protein
3140 CP002619.1 GCA_000194765.1_03140 CDS open 29697-32864 3168_na     1055_aa hsdR_2 Type-1 restriction enzyme R protein
3141 CP002619.1 GCA_000194765.1_03141 CDS open 33608-34519 912_na     303_aa cysM Cysteine synthase
3142 CP002619.1 GCA_000194765.1_03142 CDS open 34541-35725 1185_na     394_aa metB_2 Cystathionine gamma-synthase
3143 CP002619.1 GCA_000194765.1_03143 CDS open 35691-36248 558_na     185_aa cysE_2 Serine acetyltransferase
3144 CP002619.1 GCA_000194765.1_03144 CDS open 36406-36726 321_na     106_aa hypothetical protein
3145 CP002619.1 GCA_000194765.1_03145 CDS open 36723-36869 147_na     48_aa hypothetical protein
3146 CP002619.1 GCA_000194765.1_03146 CDS open 36869-37027 159_na     52_aa hypothetical protein
3147 CP002619.1 GCA_000194765.1_03147 CDS open 36956-37102 147_na     48_aa hypothetical protein
3148 CP002619.1 GCA_000194765.1_03148 CDS open 37099-37419 321_na     106_aa hypothetical protein
3149 CP002619.1 GCA_000194765.1_03149 CDS open 37481-37765 285_na     94_aa ligA_2 DNA ligase
3150 CP002619.1 GCA_000194765.1_03150 CDS open 37771-38421 651_na     216_aa bin3_2 Putative transposon Tn552 DNA-invertase bin3
3151 CP002619.1 GCA_000194765.1_03151 CDS open 38695-39162 468_na     155_aa hypothetical protein
3152 CP002619.1 GCA_000194765.1_03152 CDS open 39559-39840 282_na     93_aa IS5 family transposase ISLrh3
3153 CP002619.1 GCA_000194765.1_03153 CDS open 39885-40469 585_na     194_aa hypothetical protein
3154 CP002619.1 GCA_000194765.1_03154 CDS open 40742-40993 252_na     83_aa IS3 family transposase IS153
3155 CP002619.1 GCA_000194765.1_03155 CDS open 41318-46081 4764_na     1587_aa hypothetical protein
3156 CP002619.1 GCA_000194765.1_03156 CDS open 46198-46356 159_na     52_aa hypothetical protein
3157 CP002619.1 GCA_000194765.1_03157 CDS open 46559-46840 282_na     93_aa IS3 family transposase ISL1
3158 CP002619.1 GCA_000194765.1_03158 CDS open 46906-47721 816_na     271_aa IS3 family transposase ISL1
3159 CP002619.1 GCA_000194765.1_03159 CDS open 47704-47814 111_na     36_aa hypothetical protein
3160 CP002619.1 GCA_000194765.1_03160 CDS open 47957-48274 318_na     105_aa hypothetical protein
3161 CP002619.1 GCA_000194765.1_03161 CDS open 48468-48851 384_na     127_aa hypothetical protein
3162 CP002619.1 GCA_000194765.1_03162 CDS open 48848-50140 1293_na     430_aa dinB_3 DNA polymerase IV
3163 CP002619.1 GCA_000194765.1_03163 CDS open 50133-50474 342_na     113_aa hypothetical protein
3164 CP002619.1 GCA_000194765.1_03164 CDS open 50519-50908 390_na     129_aa hypothetical protein
3165 CP002619.1 GCA_000194765.1_03165 CDS open 50901-51737 837_na     278_aa soj_2 Sporulation initiation inhibitor protein Soj
3166 CP002619.1 GCA_000194765.1_03166 CDS open 52128-53183 1056_na     351_aa hypothetical protein
3167 CP002619.1 GCA_000194765.1_03167 CDS open 53173-53910 738_na     245_aa hypothetical protein
3168 CP002619.1 GCA_000194765.1_03168 CDS open 54404-54631 228_na     75_aa hypothetical protein
3169 CP002619.1 GCA_000194765.1_03169 CDS open 55158-55394 237_na     78_aa hypothetical protein
3170 CP002619.1 GCA_000194765.1_03170 CDS open 55402-55620 219_na     72_aa hypothetical protein
3171 CP002619.1 GCA_000194765.1_03171 CDS open 55613-55843 231_na     76_aa hypothetical protein
3172 CP002619.1 GCA_000194765.1_03172 CDS open 55830-56105 276_na     91_aa hypothetical protein
3173 CP002619.1 GCA_000194765.1_03173 CDS open 56144-56242 99_na     32_aa hypothetical protein
3174 CP002619.1 GCA_000194765.1_03174 CDS open 56324-56572 249_na     82_aa hypothetical protein
3175 CP002619.1 GCA_000194765.1_03175 CDS open 56613-57296 684_na     227_aa IS6 family transposase ISLmo3