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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Limosilactobacillus oris (GCA_000221505.2)

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PROKKA Annotations for GCA_000221505.2
Genome Selected: Limosilactobacillus oris
ContigsBases CDSrRNA tmRNAtRNA
20 2174937 2051 17 1 67
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Annotation Table [page:5]    |    Number of Records Found: 2164 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 AFTL01000002.1 GCA_000221505.2_02001 CDS open 55091-55987 897_na     298_aa hypothetical protein
2002 AFTL01000002.1 GCA_000221505.2_02002 CDS open 56021-58330 2310_na     769_aa hypothetical protein
2003 AFTL01000002.1 GCA_000221505.2_02003 CDS open 58631-59476 846_na     281_aa endA DNA-entry nuclease
2004 AFTL01000002.1 GCA_000221505.2_02004 CDS open 59593-60978 1386_na     461_aa yifK_2 putative transport protein YifK
2005 AFTL01000002.1 GCA_000221505.2_02005 CDS open 61252-62436 1185_na     394_aa hypothetical protein
2006 AFTL01000002.1 GCA_000221505.2_02006 CDS open 62543-64318 1776_na     591_aa dxs 1-deoxy-D-xylulose-5-phosphate synthase
2007 AFTL01000002.1 GCA_000221505.2_02007 CDS open 64494-65744 1251_na     416_aa hypothetical protein
2008 AFTL01000002.1 GCA_000221505.2_02008 CDS open 65744-66439 696_na     231_aa hypothetical protein
2009 AFTL01000002.1 GCA_000221505.2_02009 CDS open 66644-67471 828_na     275_aa exoA Exodeoxyribonuclease
2010 AFTL01000002.1 GCA_000221505.2_02010 CDS open 67629-68528 900_na     299_aa opuCC Glycine betainecarnitinecholine-binding protein OpuCC
2011 AFTL01000002.1 GCA_000221505.2_02011 CDS open 68546-69196 651_na     216_aa opuCB_1 Glycine betainecarnitinecholine transport system permease protein OpuCB
2012 AFTL01000002.1 GCA_000221505.2_02012 CDS open 69171-69941 771_na     256_aa opuCA Glycine betainecarnitinecholine transport ATP-binding protein OpuCA
2013 AFTL01000002.1 GCA_000221505.2_02013 CDS open 69967-70581 615_na     204_aa opuCB_2 Carnitine transport permease protein OpuCB
2014 AFTL01000002.1 GCA_000221505.2_02014 CDS open 70601-71065 465_na     154_aa ywnA_2 Putative HTH-type transcriptional regulator YwnA
2015 AFTL01000002.1 GCA_000221505.2_02015 CDS open 71062-71922 861_na     286_aa qorB Quinone oxidoreductase 2
2016 AFTL01000002.1 GCA_000221505.2_02016 CDS open 71973-74495 2523_na     840_aa uvrA_2 UvrABC system protein A
2017 AFTL01000002.1 GCA_000221505.2_02017 CDS open 74589-74981 393_na     130_aa Virulence protein
2018 AFTL01000002.1 GCA_000221505.2_02018 CDS open 75180-76022 843_na     280_aa hypothetical protein
2019 AFTL01000002.1 GCA_000221505.2_02019 CDS open 76029-77750 1722_na     573_aa ubiB protein kinase UbiB
2020 AFTL01000002.1 GCA_000221505.2_02020 CDS open 77884-79245 1362_na     453_aa hypothetical protein
2021 AFTL01000002.1 GCA_000221505.2_02021 CDS open 79289-79645 357_na     118_aa acpS Holo-[acyl-carrier-protein] synthase
2022 AFTL01000002.1 GCA_000221505.2_02022 CDS open 79809-81188 1380_na     459_aa emrY putative multidrug resistance protein EmrY
2023 AFTL01000002.1 GCA_000221505.2_02023 CDS open 81360-82511 1152_na     383_aa sotB_3 sugar efflux transporter
2024 AFTL01000002.1 GCA_000221505.2_02024 CDS open 82586-83470 885_na     294_aa ytbE putative oxidoreductase YtbE
2025 AFTL01000002.1 GCA_000221505.2_02025 CDS open 83579-84442 864_na     287_aa hypothetical protein
2026 AFTL01000002.1 GCA_000221505.2_02026 CDS open 84443-84745 303_na     100_aa Putative acetyltransferase
2027 AFTL01000002.1 GCA_000221505.2_02027 CDS open 84834-84980 147_na     48_aa hypothetical protein
2028 AFTL01000002.1 GCA_000221505.2_02028 CDS open 85124-85609 486_na     161_aa hypothetical protein
2029 AFTL01000002.1 GCA_000221505.2_02029 CDS open 85765-86556 792_na     263_aa ybjI_2 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YbjI
2030 AFTL01000002.1 GCA_000221505.2_02030 CDS open 86748-87539 792_na     263_aa hypothetical protein
2031 AFTL01000002.1 GCA_000221505.2_02031 CDS open 87643-87933 291_na     96_aa hypothetical protein
2032 AFTL01000002.1 GCA_000221505.2_02032 CDS open 88050-88430 381_na     126_aa hypothetical protein
2033 AFTL01000002.1 GCA_000221505.2_02033 CDS open 88532-88807 276_na     91_aa yoeB Toxin YoeB
2034 AFTL01000002.1 GCA_000221505.2_02034 CDS open 88807-89070 264_na     87_aa hypothetical protein
2035 AFTL01000002.1 GCA_000221505.2_02035 CDS open 89186-90049 864_na     287_aa putative oxidoreductaseMSMEI_2347
2036 AFTL01000002.1 GCA_000221505.2_02036 CDS open 90064-90945 882_na     293_aa yvgN_3 Glyoxal reductase
2037 AFTL01000002.1 GCA_000221505.2_02037 CDS open 91051-91926 876_na     291_aa argP HTH-type transcriptional regulator ArgP
2038 AFTL01000002.1 GCA_000221505.2_02038 CDS open 91928-93277 1350_na     449_aa efpA putative MFS-type transporter EfpA
2039 AFTL01000002.1 GCA_000221505.2_02039 CDS open 93457-93933 477_na     158_aa hypothetical protein
2040 AFTL01000002.1 GCA_000221505.2_02040 CDS open 93952-94692 741_na     246_aa putative oxidoreductase
2041 AFTL01000002.1 GCA_000221505.2_02041 CDS open 94857-95744 888_na     295_aa hdfR_2 HTH-type transcriptional regulator HdfR
2042 AFTL01000002.1 GCA_000221505.2_02042 CDS open 95741-96610 870_na     289_aa hdfR_3 HTH-type transcriptional regulator HdfR
2043 AFTL01000002.1 GCA_000221505.2_02043 CDS open 96732-97919 1188_na     395_aa hypothetical protein
2044 AFTL01000002.1 GCA_000221505.2_02044 CDS open 98047-98985 939_na     312_aa rihC_2 Non-specific ribonucleoside hydrolase RihC
2045 AFTL01000002.1 GCA_000221505.2_02045 CDS open 99261-99635 375_na     124_aa hypothetical protein
2046 AFTL01000002.1 GCA_000221505.2_02046 CDS open 99650-100102 453_na     150_aa hypothetical protein
2047 AFTL01000002.1 GCA_000221505.2_02047 CDS open 100126-100965 840_na     279_aa hypothetical protein
2048 AFTL01000002.1 GCA_000221505.2_02048 CDS open 100965-101810 846_na     281_aa drrA Daunorubicindoxorubicin resistance ATP-binding protein DrrA
2049 AFTL01000002.1 GCA_000221505.2_02049 CDS open 102056-103450 1395_na     464_aa ribZ_3 Riboflavin transporter RibZ
2050 AFTL01000002.1 GCA_000221505.2_02050 CDS open 103451-103888 438_na     145_aa elaA Protein ElaA
2051 AFTL01000002.1 GCA_000221505.2_02051 CDS open 103891-104331 441_na     146_aa hypothetical protein
2052 AFTL01000002.1 GCA_000221505.2_02052 CDS open 104351-104719 369_na     122_aa hypothetical protein
2053 AFTL01000002.1 GCA_000221505.2_02053 CDS open 104713-104823 111_na     36_aa hypothetical protein
2054 AFTL01000002.1 GCA_000221505.2_02054 CDS open 104909-105757 849_na     282_aa ephA Epoxide hydrolase A
2055 AFTL01000002.1 GCA_000221505.2_02055 CDS open 105786-105968 183_na     60_aa yifK_3 putative transport protein YifK
2056 AFTL01000002.1 GCA_000221505.2_02056 CDS open 105982-106737 756_na     251_aa alaS_2 Alanine--tRNA ligase
2057 AFTL01000002.1 GCA_000221505.2_02057 CDS open 106853-107173 321_na     106_aa hypothetical protein
2058 AFTL01000002.1 GCA_000221505.2_02058 CDS open 107227-108252 1026_na     341_aa ltaE Low specificity L-threonine aldolase
2059 AFTL01000002.1 GCA_000221505.2_02059 CDS open 108640-109632 993_na     330_aa pbpX_2 Putative penicillin-binding protein PbpX
2060 AFTL01000002.1 GCA_000221505.2_02060 CDS open 109886-110701 816_na     271_aa IS30 family transposase IS1070
2061 AFTL01000002.1 GCA_000221505.2_02061 CDS open 110976-111764 789_na     262_aa hypothetical protein
2062 AFTL01000002.1 GCA_000221505.2_02062 CDS open 111773-112765 993_na     330_aa hypothetical protein
2063 AFTL01000002.1 GCA_000221505.2_02063 CDS open 113083-114939 1857_na     618_aa hypothetical protein
2064 AFTL01000002.1 GCA_000221505.2_02064 CDS open 114999-116210 1212_na     403_aa hypothetical protein
2065 AFTL01000002.1 GCA_000221505.2_02065 CDS open 116214-116714 501_na     166_aa hypothetical protein
2066 AFTL01000002.1 GCA_000221505.2_02066 CDS open 116750-117436 687_na     228_aa azoR2 FMN-dependent NADH-azoreductase 2
2067 AFTL01000002.1 GCA_000221505.2_02067 CDS open 117639-118178 540_na     179_aa hpt_2 Hypoxanthine-guanine phosphoribosyltransferase
2068 AFTL01000002.1 GCA_000221505.2_02068 CDS open 118224-119198 975_na     324_aa putative protein
2069 AFTL01000002.1 GCA_000221505.2_02069 CDS open 119342-120037 696_na     231_aa hcaR Hca operon transcriptional activator HcaR
2070 AFTL01000002.1 GCA_000221505.2_02070 CDS open 120050-120226 177_na     58_aa hypothetical protein
2071 AFTL01000002.1 GCA_000221505.2_02071 CDS open 120741-121844 1104_na     367_aa IS110 family transposase ISSso6
2072 AFTL01000002.1 GCA_000221505.2_02072 CDS open 122049-122795 747_na     248_aa ybhF putative multidrug ABC transporter ATP-binding protein YbhF
2073 AFTL01000002.1 GCA_000221505.2_02073 CDS open 122773-123891 1119_na     372_aa lnrN Linearmycin resistance permease protein LnrN
2074 AFTL01000002.1 GCA_000221505.2_02074 CDS open 123916-124533 618_na     205_aa betI HTH-type transcriptional regulator BetI
2075 AFTL01000002.1 GCA_000221505.2_02075 CDS open 124917-126188 1272_na     423_aa hypothetical protein
2076 AFTL01000002.1 GCA_000221505.2_02076 CDS open 126306-127019 714_na     237_aa hypothetical protein
2077 AFTL01000002.1 GCA_000221505.2_02077 CDS open 127196-127867 672_na     223_aa insK_16 Putative transposase InsK for insertion sequence element IS150
2078 AFTL01000002.1 GCA_000221505.2_02078 CDS open 127972-128145 174_na     57_aa hypothetical protein
2079 AFTL01000002.1 GCA_000221505.2_02079 CDS open 128173-129177 1005_na     334_aa yajO 1-deoxyxylulose-5-phosphate synthase YajO
2080 AFTL01000002.1 GCA_000221505.2_02080 CDS open 129277-129927 651_na     216_aa hypothetical protein
2081 AFTL01000002.1 GCA_000221505.2_02081 CDS open 130199-130519 321_na     106_aa gdx Guanidinium exporter
2082 AFTL01000002.1 GCA_000221505.2_02082 CDS open 130584-131450 867_na     288_aa hypothetical protein
2083 AFTL01000002.1 GCA_000221505.2_02083 CDS open 131437-132738 1302_na     433_aa hypothetical protein
2084 AFTL01000002.1 GCA_000221505.2_02084 CDS open 132845-133885 1041_na     346_aa adh_2 Alcohol dehydrogenase
2085 AFTL01000002.1 GCA_000221505.2_02085 CDS open 134097-134939 843_na     280_aa IS30 family transposase IS6770
2086 AFTL01000002.1 GCA_000221505.2_02086 CDS open 135172-135588 417_na     138_aa adhR_1 HTH-type transcriptional regulator AdhR
2087 AFTL01000002.1 GCA_000221505.2_02087 CDS open 135625-135972 348_na     115_aa adhR_2 HTH-type transcriptional regulator AdhR
2088 AFTL01000002.1 GCA_000221505.2_02088 CDS open 135986-136435 450_na     149_aa hypothetical protein
2089 AFTL01000002.1 GCA_000221505.2_02089 CDS open 136518-137186 669_na     222_aa hypothetical protein
2090 AFTL01000002.1 GCA_000221505.2_02090 CDS open 137211-138002 792_na     263_aa yvgN_4 Glyoxal reductase
2091 AFTL01000002.1 GCA_000221505.2_02091 CDS open 138152-139075 924_na     307_aa cysK Cysteine synthase
2092 AFTL01000002.1 GCA_000221505.2_02092 CDS open 139081-139908 828_na     275_aa metA Serine O-acetyltransferase
2093 AFTL01000002.1 GCA_000221505.2_02093 CDS open 140151-140690 540_na     179_aa hypothetical protein
2094 AFTL01000002.1 GCA_000221505.2_02094 CDS open 140928-141017 90_na     29_aa hypothetical protein
2095 AFTL01000002.1 GCA_000221505.2_02095 CDS open 141084-141404 321_na     106_aa hypothetical protein
2096 AFTL01000002.1 GCA_000221505.2_02096 CDS open 141708-142814 1107_na     368_aa hypothetical protein
2097 AFTL01000002.1 GCA_000221505.2_02097 CDS open 142832-143656 825_na     274_aa gspA General stress protein A
2098 AFTL01000002.1 GCA_000221505.2_02098 CDS open 143799-144215 417_na     138_aa hypothetical protein
2099 AFTL01000002.1 GCA_000221505.2_02099 CDS open 144312-144785 474_na     157_aa hypothetical protein
2100 AFTL01000002.1 GCA_000221505.2_02100 CDS open 144842-145702 861_na     286_aa cynR HTH-type transcriptional regulator CynR
2101 AFTL01000002.1 GCA_000221505.2_02101 CDS open 145752-146288 537_na     178_aa hypothetical protein
2102 AFTL01000002.1 GCA_000221505.2_02102 CDS open 146460-147290 831_na     276_aa hypothetical protein
2103 AFTL01000002.1 GCA_000221505.2_02103 CDS open 147563-147946 384_na     127_aa hypothetical protein
2104 AFTL01000002.1 GCA_000221505.2_02104 CDS open 148020-148676 657_na     218_aa yedJ putative protein YedJ
2105 AFTL01000002.1 GCA_000221505.2_02105 CDS open 148730-149185 456_na     151_aa hypothetical protein
2106 AFTL01000002.1 GCA_000221505.2_02106 CDS open 149196-149849 654_na     217_aa hypothetical protein
2107 AFTL01000002.1 GCA_000221505.2_02107 CDS open 149816-150691 876_na     291_aa degV Protein DegV
2108 AFTL01000002.1 GCA_000221505.2_02108 CDS open 150896-152575 1680_na     559_aa rqcH Rqc2 RqcH
2109 AFTL01000002.1 GCA_000221505.2_02109 CDS open 152946-154718 1773_na     590_aa sph Oleate hydratase
2110 AFTL01000002.1 GCA_000221505.2_02110 CDS open 154968-157466 2499_na     832_aa carB_1 Carbamoyl-phosphate synthase large chain
2111 AFTL01000002.1 GCA_000221505.2_02111 CDS open 157466-158548 1083_na     360_aa carA_1 Carbamoyl-phosphate synthase small chain
2112 AFTL01000002.1 GCA_000221505.2_02112 CDS open 158620-159534 915_na     304_aa rluD_2 Ribosomal large subunit pseudouridine synthase D
2113 AFTL01000002.1 GCA_000221505.2_02113 CDS open 159535-159981 447_na     148_aa lspA Lipoprotein signal peptidase
2114 AFTL01000002.1 GCA_000221505.2_02114 CDS open 159984-160379 396_na     131_aa hypothetical protein
2115 AFTL01000002.1 GCA_000221505.2_02115 CDS open 160418-160807 390_na     129_aa rnhA_2 14.7 kDa ribonuclease H-like protein
2116 AFTL01000002.1 GCA_000221505.2_02116 CDS open 160902-161270 369_na     122_aa hypothetical protein
2117 AFTL01000002.1 GCA_000221505.2_02117 CDS open 161452-162783 1332_na     443_aa hypothetical protein
2118 AFTL01000002.1 GCA_000221505.2_02118 CDS open 162929-163531 603_na     200_aa rlmL_1 Ribosomal RNA large subunit methyltransferase L
2119 AFTL01000002.1 GCA_000221505.2_02119 CDS open 163540-164061 522_na     173_aa rlmL_2 Ribosomal RNA large subunit methyltransferase L
2120 AFTL01000002.1 GCA_000221505.2_02120 CDS open 164128-164946 819_na     272_aa putative oxidoreductaseMSMEI_2347
2121 AFTL01000002.1 GCA_000221505.2_02121 CDS open 164962-165330 369_na     122_aa hypothetical protein
2122 AFTL01000002.1 GCA_000221505.2_02122 CDS open 165493-168675 3183_na     1060_aa carB_2 Carbamoyl-phosphate synthase large chain
2123 AFTL01000002.1 GCA_000221505.2_02123 CDS open 168668-169759 1092_na     363_aa carA_2 Carbamoyl-phosphate synthase small chain
2124 AFTL01000002.1 GCA_000221505.2_02124 CDS open 169759-171045 1287_na     428_aa pyrC Dihydroorotase
2125 AFTL01000002.1 GCA_000221505.2_02125 CDS open 171045-171995 951_na     316_aa pyrB Aspartate carbamoyltransferase
2126 AFTL01000002.1 GCA_000221505.2_02126 CDS open 172111-172641 531_na     176_aa pyrR_2 Bifunctional protein pyrR
2127 AFTL01000002.1 misc_RNA open 172669-172783 PyrR
2128 AFTL01000002.1 misc_RNA open 172913-173286 RNaseP_bact_b
2129 AFTL01000002.1 GCA_000221505.2_02129 CDS open 173319-173687 369_na     122_aa gpsB Cell cycle protein GpsB
2130 AFTL01000002.1 GCA_000221505.2_02130 CDS open 173764-174348 585_na     194_aa hypothetical protein
2131 AFTL01000002.1 GCA_000221505.2_02131 CDS open 174432-175067 636_na     211_aa recU Holliday junction resolvase RecU
2132 AFTL01000002.1 GCA_000221505.2_02132 CDS open 175057-177309 2253_na     750_aa ponA Penicillin-binding protein 1A
2133 AFTL01000002.1 GCA_000221505.2_02133 CDS open 177512-177721 210_na     69_aa hypothetical protein
2134 AFTL01000002.1 GCA_000221505.2_02134 CDS open 177718-178641 924_na     307_aa yicL_3 putative inner membrane transporter YicL
2135 AFTL01000002.1 GCA_000221505.2_02135 CDS open 178659-179366 708_na     235_aa dnaD DNA replication protein DnaD
2136 AFTL01000002.1 GCA_000221505.2_02136 CDS open 179431-179949 519_na     172_aa hypothetical protein
2137 AFTL01000002.1 GCA_000221505.2_02137 CDS open 180022-182871 2850_na     949_aa dinG_2 3-5 exonuclease DinG
2138 AFTL01000002.1 GCA_000221505.2_02138 CDS open 183053-183427 375_na     124_aa hypothetical protein
2139 AFTL01000002.1 GCA_000221505.2_02139 CDS open 183565-184002 438_na     145_aa galK_2 Galactokinase
2140 AFTL01000002.1 GCA_000221505.2_02140 CDS open 184002-184973 972_na     323_aa thrB Homoserine kinase
2141 AFTL01000002.1 GCA_000221505.2_02141 CDS open 185000-186112 1113_na     370_aa Phosphomevalonate kinase
2142 AFTL01000002.1 GCA_000221505.2_02142 CDS open 186165-187208 1044_na     347_aa fni Isopentenyl-diphosphate delta-isomerase
2143 AFTL01000002.1 GCA_000221505.2_02143 CDS open 187276-188142 867_na     288_aa hypothetical protein
2144 AFTL01000002.1 GCA_000221505.2_02144 CDS open 188158-189534 1377_na     458_aa rsmF Ribosomal RNA small subunit methyltransferase F
2145 AFTL01000002.1 GCA_000221505.2_02145 CDS open 189661-190473 813_na     270_aa yitU 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YitU
2146 AFTL01000002.1 GCA_000221505.2_02146 CDS open 190470-190709 240_na     79_aa hypothetical protein
2147 AFTL01000002.1 GCA_000221505.2_02147 CDS open 191290-191550 261_na     86_aa hypothetical protein
2148 AFTL01000002.1 GCA_000221505.2_02148 CDS open 191578-191979 402_na     133_aa hypothetical protein
2149 AFTL01000002.1 GCA_000221505.2_02149 CDS open 192064-192819 756_na     251_aa hypothetical protein
2150 AFTL01000002.1 GCA_000221505.2_02150 CDS open 193034-193597 564_na     187_aa hypothetical protein
2151 AFTL01000002.1 GCA_000221505.2_02151 CDS open 193594-193833 240_na     79_aa hypothetical protein
2152 AFTL01000002.1 GCA_000221505.2_02152 CDS open 194705-197815 3111_na     1036_aa hypothetical protein
2153 AFTL01000002.1 GCA_000221505.2_02153 CDS open 202371-203357 987_na     328_aa hypothetical protein
2154 AFTL01000002.1 GCA_000221505.2_02154 CDS open 205874-206980 1107_na     368_aa ISL3 family transposase ISSth1
2155 AFTL01000002.1 GCA_000221505.2_02155 CDS open 207347-207535 189_na     62_aa hypothetical protein
2156 AFTL01000002.1 GCA_000221505.2_02156 CDS open 207528-208862 1335_na     444_aa gtfB UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase stabilizing protein GtfB
2157 AFTL01000002.1 GCA_000221505.2_02157 CDS open 208855-210387 1533_na     510_aa gtfA UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase GtfA subunit
2158 AFTL01000002.1 GCA_000221505.2_02158 CDS open 210407-211240 834_na     277_aa secA_2 Protein translocase subunit SecA
2159 AFTL01000001.1 GCA_000221505.2_02159 CDS open 641-988 348_na     115_aa hypothetical protein
2160 AFTL01000001.1 GCA_000221505.2_02160 CDS open 1150-1560 411_na     136_aa hypothetical protein
2161 AFTL01000001.1 GCA_000221505.2_02161 CDS open 1816-2196 381_na     126_aa hypothetical protein
2162 AFTL01000001.1 GCA_000221505.2_02162 CDS open 2519-3970 1452_na     483_aa pepDA_7 Dipeptidase A
2163 AFTL01000001.1 GCA_000221505.2_02163 CDS open 4239-4715 477_na     158_aa Putative universal stress protein
2164 AFTL01000001.1 GCA_000221505.2_02164 CDS open 4778-5320 543_na     180_aa hypothetical protein