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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Phocaeicola abscessus (GCA_000312445.1)

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PROKKA Annotations for GCA_000312445.1
Genome Selected: Phocaeicola abscessus
ContigsBases CDSrRNA tmRNAtRNA
14 2,536,876 2072 2 1 51
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:5]    |    Number of Records Found: 2134 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 HE997186.1 GCA_000312445.1_02001 CDS open 147757-148827 1071_na     356_aa hypothetical protein
2002 HE997186.1 GCA_000312445.1_02002 CDS open 148852-149307 456_na     151_aa queF NADPH-dependent 7-cyano-7-deazaguanine reductase
2003 HE997186.1 GCA_000312445.1_02003 CDS open 149315-149989 675_na     224_aa queC 7-cyano-7-deazaguanine synthase
2004 HE997186.1 GCA_000312445.1_02004 CDS open 150503-151150 648_na     215_aa nth_2 Endonuclease III
2005 HE997186.1 GCA_000312445.1_02005 CDS open 151130-151930 801_na     266_aa rbn Ribonuclease BN
2006 HE997186.1 GCA_000312445.1_02006 CDS open 151943-152803 861_na     286_aa hypothetical protein
2007 HE997186.1 GCA_000312445.1_02007 CDS open 152903-153940 1038_na     345_aa pheS Phenylalanine--tRNA ligase alpha subunit
2008 HE997186.1 GCA_000312445.1_02008 CDS open 154051-155766 1716_na     571_aa yfkN_2 Trifunctional nucleotide phosphoesterase protein YfkN
2009 HE997186.1 GCA_000312445.1_02009 CDS open 156039-156221 183_na     60_aa hypothetical protein
2010 HE997186.1 GCA_000312445.1_02010 CDS open 156232-156444 213_na     70_aa hypothetical protein
2011 HE997186.1 GCA_000312445.1_02011 CDS open 156480-157550 1071_na     356_aa estD Esterase EstD
2012 HE997186.1 GCA_000312445.1_02012 CDS open 157602-157934 333_na     110_aa emrE Multidrug transporter EmrE
2013 HE997186.1 GCA_000312445.1_02013 CDS open 158007-158366 360_na     119_aa hypothetical protein
2014 HE997186.1 GCA_000312445.1_02014 CDS open 158451-158843 393_na     130_aa hypothetical protein
2015 HE997186.1 GCA_000312445.1_02015 CDS open 158957-159766 810_na     269_aa hypothetical protein
2016 HE997186.1 GCA_000312445.1_02016 CDS open 159763-160821 1059_na     352_aa btuB_8 Vitamin B12 transporter BtuB
2017 HE997186.1 GCA_000312445.1_02017 CDS open 160829-161773 945_na     314_aa hypothetical protein
2018 HE997186.1 GCA_000312445.1_02018 CDS open 161913-163136 1224_na     407_aa yhjX putative MFS-type transporter YhjX
2019 HE997186.1 GCA_000312445.1_02019 CDS open 163316-164983 1668_na     555_aa Putative serine esterase
2020 HE997186.1 GCA_000312445.1_02020 CDS open 165029-165403 375_na     124_aa hypothetical protein
2021 HE997186.1 GCA_000312445.1_02021 CDS open 165490-166047 558_na     185_aa Putative acetyltransferase
2022 HE997186.1 GCA_000312445.1_02022 CDS open 166065-166667 603_na     200_aa hypothetical protein
2023 HE997186.1 GCA_000312445.1_02023 CDS open 166709-166819 111_na     36_aa hypothetical protein
2024 HE997186.1 GCA_000312445.1_02024 CDS open 166816-167673 858_na     285_aa putative oxidoreductaseMSMEI_2347
2025 HE997186.1 GCA_000312445.1_02025 CDS open 167860-169383 1524_na     507_aa hypothetical protein
2026 HE997186.1 GCA_000312445.1_02026 CDS open 169388-174757 5370_na     1789_aa hypothetical protein
2027 HE997186.1 GCA_000312445.1_02027 CDS open 174809-175720 912_na     303_aa hypothetical protein
2028 HE997186.1 GCA_000312445.1_02028 CDS open 176557-177447 891_na     296_aa hypothetical protein
2029 HE997186.1 GCA_000312445.1_02029 CDS open 177591-177914 324_na     107_aa hypothetical protein
2030 HE997186.1 GCA_000312445.1_02030 CDS open 178058-178948 891_na     296_aa hypothetical protein
2031 HE997186.1 GCA_000312445.1_02031 CDS open 179167-180381 1215_na     404_aa hypothetical protein
2032 HE997186.1 GCA_000312445.1_02032 CDS open 180392-180748 357_na     118_aa hypothetical protein
2033 HE997186.1 GCA_000312445.1_02033 CDS open 180848-181594 747_na     248_aa hypothetical protein
2034 HE997186.1 GCA_000312445.1_02034 CDS open 181609-182034 426_na     141_aa xerC_4 Tyrosine recombinase XerC
2035 HE997186.1 GCA_000312445.1_02035 CDS open 182080-183309 1230_na     409_aa xerC_5 Tyrosine recombinase XerC
2036 HE997186.1 GCA_000312445.1_02036 CDS open 183362-184564 1203_na     400_aa xerC_6 Tyrosine recombinase XerC
2037 HE997186.1 GCA_000312445.1_02037 CDS open 184573-184935 363_na     120_aa hypothetical protein
2038 HE997186.1 GCA_000312445.1_02038 CDS open 185197-185808 612_na     203_aa nreC_2 Oxygen regulatory protein NreC
2039 HE997186.1 GCA_000312445.1_02039 CDS open 185805-187715 1911_na     636_aa hypothetical protein
2040 HE997186.1 GCA_000312445.1_02040 CDS open 187818-189086 1269_na     422_aa hypothetical protein
2041 HE997186.1 GCA_000312445.1_02041 CDS open 189093-190169 1077_na     358_aa yhcG Putative nuclease YhcG
2042 HE997186.1 GCA_000312445.1_02042 CDS open 190384-192246 1863_na     620_aa hypothetical protein
2043 HE997186.1 GCA_000312445.1_02043 CDS open 192433-192906 474_na     157_aa hypothetical protein
2044 HE997186.1 GCA_000312445.1_02044 CDS open 193025-193447 423_na     140_aa hypothetical protein
2045 HE997186.1 GCA_000312445.1_02045 CDS open 193489-194049 561_na     186_aa hypothetical protein
2046 HE997186.1 GCA_000312445.1_02046 CDS open 194108-195121 1014_na     337_aa hypothetical protein
2047 HE997186.1 GCA_000312445.1_02047 CDS open 195130-196359 1230_na     409_aa hypothetical protein
2048 HE997186.1 GCA_000312445.1_02048 CDS open 196396-197073 678_na     225_aa hypothetical protein
2049 HE997186.1 GCA_000312445.1_02049 CDS open 197263-197766 504_na     167_aa hypothetical protein
2050 HE997186.1 GCA_000312445.1_02050 CDS open 197852-198268 417_na     138_aa hypothetical protein
2051 HE997186.1 GCA_000312445.1_02051 CDS open 198968-199396 429_na     142_aa hypothetical protein
2052 HE997186.1 GCA_000312445.1_02052 CDS open 200222-200902 681_na     226_aa hypothetical protein
2053 HE997186.1 GCA_000312445.1_02053 CDS open 201111-202091 981_na     326_aa hypothetical protein
2054 HE997186.1 GCA_000312445.1_02054 CDS open 202233-204032 1800_na     599_aa hypothetical protein
2055 HE997186.1 GCA_000312445.1_02055 CDS open 204322-205452 1131_na     376_aa hypothetical protein
2056 HE997186.1 GCA_000312445.1_02056 CDS open 205466-206023 558_na     185_aa hypothetical protein
2057 HE997186.1 GCA_000312445.1_02057 CDS open 206355-207218 864_na     287_aa hypothetical protein
2058 HE997186.1 GCA_000312445.1_02058 CDS open 207538-208377 840_na     279_aa hypothetical protein
2059 HE997186.1 GCA_000312445.1_02059 CDS open 208506-209900 1395_na     464_aa pepP_2 Xaa-Pro aminopeptidase
2060 HE997186.1 GCA_000312445.1_02060 CDS open 209920-211131 1212_na     403_aa pepE_2 Aminopeptidase E
2061 HE997186.1 GCA_000312445.1_02061 CDS open 211333-213057 1725_na     574_aa recJ Single-stranded-DNA-specific exonuclease RecJ
2062 HE997186.1 GCA_000312445.1_02062 CDS open 213054-214949 1896_na     631_aa cshA_2 DEAD-box ATP-dependent RNA helicase CshA
2063 HE997186.1 GCA_000312445.1_02063 CDS open 214998-215945 948_na     315_aa bepA_5 Beta-barrel assembly-enhancing protease
2064 HE997186.1 GCA_000312445.1_02064 CDS open 215984-217159 1176_na     391_aa patB Cystathionine beta-lyase PatB
2065 HE997186.1 GCA_000312445.1_02065 CDS open 217490-218968 1479_na     492_aa rhaB L-Rhamnulokinase
2066 HE997186.1 GCA_000312445.1_02066 CDS open 218997-220250 1254_na     417_aa rhaA L-rhamnose isomerase
2067 HE997186.1 GCA_000312445.1_02067 CDS open 220257-221267 1011_na     336_aa rhaT L-rhamnose-proton symporter
2068 HE997186.1 GCA_000312445.1_02068 CDS open 221287-222096 810_na     269_aa rhaD Rhamnulose-1-phosphate aldolase
2069 HE997186.1 GCA_000312445.1_02069 CDS open 222117-223091 975_na     324_aa hypothetical protein
2070 HE997186.1 GCA_000312445.1_02070 CDS open 223183-223392 210_na     69_aa tatA Sec-independent protein translocase protein TatA
2071 HE997186.1 GCA_000312445.1_02071 CDS open 223402-224472 1071_na     356_aa tatC Sec-independent protein translocase protein TatC
2072 HE997186.1 GCA_000312445.1_02072 CDS open 224570-226039 1470_na     489_aa iolG_10 Inositol 2-dehydrogenaseD-chiro-inositol 3-dehydrogenase
2073 HE997186.1 GCA_000312445.1_02073 CDS open 226280-226813 534_na     177_aa N-acetylglucosamine-6-O-sulfatase
2074 HE997186.1 GCA_000312445.1_02074 CDS open 226810-227337 528_na     175_aa N-acetylglucosamine-6-O-sulfatase
2075 HE997186.1 GCA_000312445.1_02075 CDS open 227303-227866 564_na     187_aa hypothetical protein
2076 HE997186.1 GCA_000312445.1_02076 CDS open 227875-228555 681_na     226_aa hypothetical protein
2077 HE997186.1 GCA_000312445.1_02077 CDS open 228697-229599 903_na     300_aa rhaR_2 HTH-type transcriptional activator RhaR
2078 HE997186.1 GCA_000312445.1_02078 CDS open 229770-231260 1491_na     496_aa proS Proline--tRNA ligase
2079 HE997186.1 GCA_000312445.1_02079 CDS open 231345-232505 1161_na     386_aa hypothetical protein
2080 HE997186.1 GCA_000312445.1_02080 CDS open 232509-234536 2028_na     675_aa glgB 1%2C4-alpha-glucan branching enzyme GlgB
2081 HE997186.1 GCA_000312445.1_02081 CDS open 234565-235233 669_na     222_aa hypothetical protein
2082 HE997186.1 GCA_000312445.1_02082 CDS open 235317-236441 1125_na     374_aa hypothetical protein
2083 HE997186.1 GCA_000312445.1_02083 CDS open 236534-237823 1290_na     429_aa hypothetical protein
2084 HE997186.1 GCA_000312445.1_02084 CDS open 237826-238575 750_na     249_aa kpsU 3-deoxy-manno-octulosonate cytidylyltransferase
2085 HE997186.1 GCA_000312445.1_02085 CDS open 238682-239053 372_na     123_aa hypothetical protein
2086 HE997186.1 GCA_000312445.1_02086 CDS open 239170-240195 1026_na     341_aa hypothetical protein
2087 HE997186.1 GCA_000312445.1_02087 CDS open 240641-243379 2739_na     912_aa metH_2 Methionine synthase
2088 HE997186.1 GCA_000312445.1_02088 CDS open 243382-243834 453_na     150_aa smpB SsrA-binding protein
2089 HE997186.1 GCA_000312445.1_02089 CDS open 243834-244403 570_na     189_aa hypothetical protein
2090 HE997186.1 GCA_000312445.1_02090 CDS open 244606-247842 3237_na     1078_aa rsxB_2 Ion-translocating oxidoreductase complex subunit B
2091 HE997186.1 GCA_000312445.1_02091 CDS open 247937-248662 726_na     241_aa hypothetical protein
2092 HE997186.1 GCA_000312445.1_02092 CDS open 248861-249871 1011_na     336_aa ldhA D-lactate dehydrogenase
2093 HE997186.1 GCA_000312445.1_02093 CDS open 249868-250512 645_na     214_aa maf dTTPUTP pyrophosphatase
2094 HE997186.1 GCA_000312445.1_02094 CDS open 250522-251040 519_na     172_aa kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
2095 HE997186.1 GCA_000312445.1_02095 CDS open 251050-251166 117_na     38_aa hypothetical protein
2096 HE997186.1 GCA_000312445.1_02096 CDS open 251234-252082 849_na     282_aa hypothetical protein
2097 HE997187.1 GCA_000312445.1_02097 CDS open 225-803 579_na     192_aa hypothetical protein
2098 HE997187.1 GCA_000312445.1_02098 CDS open 816-1001 186_na     61_aa rpmF 50S ribosomal protein L32
2099 HE997187.1 GCA_000312445.1_02099 CDS open 1100-2104 1005_na     334_aa fabH 3-oxoacyl-[acyl-carrier-protein] synthase 3
2100 HE997187.1 GCA_000312445.1_02100 CDS open 2192-3076 885_na     294_aa era GTPase Era
2101 HE997187.1 GCA_000312445.1_02101 CDS open 3108-4421 1314_na     437_aa der_2 GTPase Der
2102 HE997187.1 GCA_000312445.1_02102 CDS open 4472-5251 780_na     259_aa metN Methionine import ATP-binding protein MetN
2103 HE997187.1 GCA_000312445.1_02103 CDS open 5248-6009 762_na     253_aa mlaE Intermembrane phospholipid transport system permease protein MlaE
2104 HE997187.1 GCA_000312445.1_02104 CDS open 6138-6953 816_na     271_aa lptB Lipopolysaccharide export system ATP-binding protein LptB
2105 HE997187.1 GCA_000312445.1_02105 CDS open 7029-7361 333_na     110_aa hypothetical protein
2106 HE997187.1 GCA_000312445.1_02106 CDS open 7487-8845 1359_na     452_aa tig Trigger factor
2107 HE997187.1 GCA_000312445.1_02107 CDS open 9021-9695 675_na     224_aa clpP ATP-dependent Clp protease proteolytic subunit
2108 HE997187.1 GCA_000312445.1_02108 CDS open 9778-10977 1200_na     399_aa clpX ATP-dependent Clp protease ATP-binding subunit ClpX
2109 HE997187.1 GCA_000312445.1_02109 CDS open 11122-13302 2181_na     726_aa recQ ATP-dependent DNA helicase RecQ
2110 HE997187.1 GCA_000312445.1_02110 CDS open 13353-15827 2475_na     824_aa btuB_9 Vitamin B12 transporter BtuB
2111 HE997187.1 GCA_000312445.1_02111 CDS open 15994-17334 1341_na     446_aa hypothetical protein
2112 HE997187.1 GCA_000312445.1_02112 CDS open 17370-18800 1431_na     476_aa hypothetical protein
2113 HE997187.1 GCA_000312445.1_02113 CDS open 18885-20207 1323_na     440_aa ffh Signal recognition particle protein
2114 HE997187.1 GCA_000312445.1_02114 CDS open 20219-21100 882_na     293_aa folD Bifunctional protein FolD protein
2115 HE997187.1 GCA_000312445.1_02115 CDS open 21097-22170 1074_na     357_aa hypothetical protein
2116 HE997187.1 tRNA open 22258-22332 tRNA-His(gtg)
2117 HE997188.1 GCA_000312445.1_02117 CDS open 35-2515 2481_na     826_aa hypothetical protein
2118 HE997188.1 GCA_000312445.1_02118 CDS open 2929-4176 1248_na     415_aa hflX GTPase HflX
2119 HE997188.1 GCA_000312445.1_02119 CDS open 4267-5910 1644_na     547_aa fumA Fumarate hydratase class I%2C aerobic
2120 HE997188.1 GCA_000312445.1_02120 CDS open 6015-6947 933_na     310_aa rsgA Small ribosomal subunit biogenesis GTPase RsgA
2121 HE997188.1 GCA_000312445.1_02121 CDS open 6959-7522 564_na     187_aa frr Ribosome-recycling factor
2122 HE997188.1 GCA_000312445.1_02122 CDS open 7606-8316 711_na     236_aa pyrH Uridylate kinase
2123 HE997188.1 GCA_000312445.1_02123 CDS open 8342-9541 1200_na     399_aa hypothetical protein
2124 HE997189.1 rRNA open 227-1752 16S ribosomal RNA
2125 HE997189.1 tRNA open 1915-1989 tRNA-Ile(gat)
2126 HE997189.1 tRNA open 2026-2100 tRNA-Ala(tgc)
2127 HE997189.1 rRNA open 2256-5166 23S ribosomal RNA
2128 HE997190.1 GCA_000312445.1_02128 CDS open 229-333 105_na     34_aa hypothetical protein
2129 HE997190.1 GCA_000312445.1_02129 CDS open 330-551 222_na     73_aa hypothetical protein
2130 HE997190.1 GCA_000312445.1_02130 CDS open 1162-1686 525_na     174_aa hypothetical protein
2131 HE997190.1 GCA_000312445.1_02131 CDS open 1832-2662 831_na     276_aa lgt_2 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase
2132 HE997193.1 GCA_000312445.1_02132 CDS open 320-565 246_na     81_aa hypothetical protein
2133 HE997194.1 GCA_000312445.1_02133 CDS open 320-565 246_na     81_aa hypothetical protein
2134 HE997195.1 GCA_000312445.1_02134 CDS open 143-628 486_na     161_aa SusD-like protein P38