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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Afipia broomeae (GCA_000314675.2)

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PROKKA Annotations for GCA_000314675.2
Genome Selected: Afipia broomeae
ContigsBases CDSrRNA tmRNAtRNA
4 5261968 5039 3 1 54
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:11]    |    Number of Records Found: 5129 [11 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  10  11  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
5001 KB375285.1 misc_RNA open 2218-2324 ROSE
5002 KB375285.1 GCA_000314675.2_05002 CDS open 2399-2836 438_na     145_aa trxC_2 Thioredoxin 2
5003 KB375285.1 GCA_000314675.2_05003 CDS open 3015-3746 732_na     243_aa Peroxiredoxin
5004 KB375285.1 GCA_000314675.2_05004 CDS open 3759-4049 291_na     96_aa hypothetical protein
5005 KB375285.1 GCA_000314675.2_05005 CDS open 4209-4520 312_na     103_aa hypothetical protein
5006 KB375285.1 GCA_000314675.2_05006 CDS open 4554-4694 141_na     46_aa hypothetical protein
5007 KB375285.1 GCA_000314675.2_05007 CDS open 4905-5420 516_na     171_aa grpE_3 Protein GrpE
5008 KB375285.1 GCA_000314675.2_05008 CDS open 5612-6100 489_na     162_aa hypothetical protein
5009 KB375285.1 GCA_000314675.2_05009 CDS open 6177-6524 348_na     115_aa hypothetical protein
5010 KB375285.1 GCA_000314675.2_05010 CDS open 6525-7436 912_na     303_aa cbpA_4 Curved DNA-binding protein
5011 KB375285.1 GCA_000314675.2_05011 CDS open 7867-8220 354_na     117_aa hypothetical protein
5012 KB375285.1 GCA_000314675.2_05012 CDS open 8369-9349 981_na     326_aa hypothetical protein
5013 KB375285.1 GCA_000314675.2_05013 CDS open 9458-9841 384_na     127_aa hypothetical protein
5014 KB375285.1 GCA_000314675.2_05014 CDS open 9929-10123 195_na     64_aa hypothetical protein
5015 KB375285.1 GCA_000314675.2_05015 CDS open 10031-10513 483_na     160_aa hypothetical protein
5016 KB375285.1 GCA_000314675.2_05016 CDS open 10992-11804 813_na     270_aa hypothetical protein
5017 KB375285.1 GCA_000314675.2_05017 CDS open 11891-12655 765_na     254_aa ycgJ putative methyltransferase YcgJ
5018 KB375285.1 GCA_000314675.2_05018 CDS open 12661-13365 705_na     234_aa hypothetical protein
5019 KB375285.1 GCA_000314675.2_05019 CDS open 13362-13790 429_na     142_aa hypothetical protein
5020 KB375285.1 GCA_000314675.2_05020 CDS open 14033-16372 2340_na     779_aa hypothetical protein
5021 KB375285.1 GCA_000314675.2_05021 CDS open 16375-16797 423_na     140_aa hypothetical protein
5022 KB375285.1 GCA_000314675.2_05022 CDS open 17333-18034 702_na     233_aa hypothetical protein
5023 KB375285.1 GCA_000314675.2_05023 CDS open 18031-18456 426_na     141_aa hypothetical protein
5024 KB375285.1 GCA_000314675.2_05024 CDS open 18497-19729 1233_na     410_aa hypothetical protein
5025 KB375285.1 GCA_000314675.2_05025 CDS open 20033-20362 330_na     109_aa hypothetical protein
5026 KB375285.1 GCA_000314675.2_05026 CDS open 20425-20817 393_na     130_aa hypothetical protein
5027 KB375285.1 GCA_000314675.2_05027 CDS open 20900-21232 333_na     110_aa Single-stranded DNA-binding protein
5028 KB375285.1 GCA_000314675.2_05028 CDS open 21281-21478 198_na     65_aa hypothetical protein
5029 KB375285.1 GCA_000314675.2_05029 CDS open 21851-23083 1233_na     410_aa hypothetical protein
5030 KB375285.1 misc_RNA open 23197-23241 ctRNA_p42d
5031 KB375285.1 GCA_000314675.2_05031 CDS open 23303-24322 1020_na     339_aa noc_2 Nucleoid occlusion protein
5032 KB375285.1 GCA_000314675.2_05032 CDS open 24325-25530 1206_na     401_aa hypothetical protein
5033 KB375285.1 GCA_000314675.2_05033 CDS open 25932-26858 927_na     308_aa hypothetical protein
5034 KB375285.1 GCA_000314675.2_05034 CDS open 26903-27301 399_na     132_aa hypothetical protein
5035 KB375285.1 GCA_000314675.2_05035 CDS open 27516-28835 1320_na     439_aa hypothetical protein
5036 KB375285.1 GCA_000314675.2_05036 CDS open 28814-29251 438_na     145_aa hypothetical protein
5037 KB375285.1 GCA_000314675.2_05037 CDS open 29383-30678 1296_na     431_aa xerC_9 Tyrosine recombinase XerC
5038 KB375285.1 GCA_000314675.2_05038 CDS open 30802-31743 942_na     313_aa hypothetical protein
5039 KB375285.1 GCA_000314675.2_05039 CDS open 31745-32407 663_na     220_aa scpB_2 Segregation and condensation protein B
5040 KB375285.1 GCA_000314675.2_05040 CDS open 32496-34130 1635_na     544_aa recF_3 DNA replication and repair protein RecF
5041 KB375285.1 GCA_000314675.2_05041 CDS open 34127-35275 1149_na     382_aa addA_2 ATP-dependent helicasenuclease subunit A
5042 KB375285.1 GCA_000314675.2_05042 CDS open 35377-37113 1737_na     578_aa hypothetical protein
5043 KB375285.1 GCA_000314675.2_05043 CDS open 37623-38891 1269_na     422_aa hypothetical protein
5044 KB375285.1 GCA_000314675.2_05044 CDS open 38895-42398 3504_na     1167_aa hypothetical protein
5045 KB375285.1 GCA_000314675.2_05045 CDS open 42582-43553 972_na     323_aa dmlR_3 HTH-type transcriptional regulator DmlR
5046 KB375285.1 GCA_000314675.2_05046 CDS open 43657-44673 1017_na     338_aa adh_2 Alcohol dehydrogenase
5047 KB375285.1 misc_RNA open 44941-45032 ROSE
5048 KB375285.1 GCA_000314675.2_05048 CDS open 45026-45514 489_na     162_aa ibpA_5 Small heat shock protein IbpA
5049 KB375285.1 GCA_000314675.2_05049 CDS open 45590-46060 471_na     156_aa hypothetical protein
5050 KB375285.1 GCA_000314675.2_05050 CDS open 46088-46360 273_na     90_aa hypothetical protein
5051 KB375285.1 GCA_000314675.2_05051 CDS open 46617-47078 462_na     153_aa hypothetical protein
5052 KB375285.1 GCA_000314675.2_05052 CDS open 47163-47426 264_na     87_aa hypothetical protein
5053 KB375285.1 GCA_000314675.2_05053 CDS open 47495-47809 315_na     104_aa hypothetical protein
5054 KB375285.1 GCA_000314675.2_05054 CDS open 48490-48648 159_na     52_aa hypothetical protein
5055 KB375285.1 GCA_000314675.2_05055 CDS open 48968-49153 186_na     61_aa hypothetical protein
5056 KB375285.1 GCA_000314675.2_05056 CDS open 49563-50648 1086_na     361_aa dinB_4 DNA polymerase IV
5057 KB375285.1 GCA_000314675.2_05057 CDS open 50661-51167 507_na     168_aa hypothetical protein
5058 KB375285.1 GCA_000314675.2_05058 CDS open 51226-51816 591_na     196_aa hypothetical protein
5059 KB375285.1 GCA_000314675.2_05059 CDS open 51824-52654 831_na     276_aa xthA_4 Exodeoxyribonuclease III
5060 KB375285.1 GCA_000314675.2_05060 CDS open 52658-54547 1890_na     629_aa ligD_3 Multifunctional non-homologous end joining protein LigD
5061 KB375285.1 GCA_000314675.2_05061 CDS open 54613-54798 186_na     61_aa hypothetical protein
5062 KB375285.1 GCA_000314675.2_05062 CDS open 54926-56503 1578_na     525_aa dnaE2_2 Error-prone DNA polymerase
5063 KB375285.1 GCA_000314675.2_05063 CDS open 56546-59518 2973_na     990_aa Tn3 family transposase ISMex22
5064 KB375285.1 GCA_000314675.2_05064 CDS open 59648-60280 633_na     210_aa hin DNA-invertase hin
5065 KB375285.1 GCA_000314675.2_05065 CDS open 60725-61612 888_na     295_aa cysL_2 HTH-type transcriptional regulator CysL
5066 KB375285.1 GCA_000314675.2_05066 CDS open 61620-62621 1002_na     333_aa ptxD Phosphonate dehydrogenase
5067 KB375285.1 GCA_000314675.2_05067 CDS open 62634-63452 819_na     272_aa phnE_2 Phosphate-import permease protein PhnE
5068 KB375285.1 GCA_000314675.2_05068 CDS open 63460-64320 861_na     286_aa ptxB putative phosphite transport system-binding protein PtxB
5069 KB375285.1 GCA_000314675.2_05069 CDS open 64317-65168 852_na     283_aa phnC_2 Phosphate-import ATP-binding protein PhnC
5070 KB375285.1 GCA_000314675.2_05070 CDS open 65514-67229 1716_na     571_aa dnaE2_3 Error-prone DNA polymerase
5071 KB375285.1 GCA_000314675.2_05071 CDS open 67226-68749 1524_na     507_aa imuB_2 Protein ImuB
5072 KB375285.1 GCA_000314675.2_05072 CDS open 69042-69308 267_na     88_aa hypothetical protein
5073 KB375285.1 GCA_000314675.2_05073 CDS open 69678-69971 294_na     97_aa hypothetical protein
5074 KB375285.1 GCA_000314675.2_05074 CDS open 69968-70273 306_na     101_aa hypothetical protein
5075 KB375285.1 GCA_000314675.2_05075 CDS open 70352-71278 927_na     308_aa traC_7 DNA primase TraC
5076 KB375285.1 GCA_000314675.2_05076 CDS open 71616-72203 588_na     195_aa hypothetical protein
5077 KB375285.1 GCA_000314675.2_05077 CDS open 72590-73000 411_na     136_aa hypothetical protein
5078 KB375285.1 GCA_000314675.2_05078 CDS open 72997-73887 891_na     296_aa hypothetical protein
5079 KB375285.1 GCA_000314675.2_05079 CDS open 73884-74360 477_na     158_aa hypothetical protein
5080 KB375285.1 GCA_000314675.2_05080 CDS open 74448-76121 1674_na     557_aa noc_3 Nucleoid occlusion protein
5081 KB375285.1 GCA_000314675.2_05081 CDS open 76372-81471 5100_na     1699_aa hypothetical protein
5082 KB375285.1 GCA_000314675.2_05082 CDS open 81641-82246 606_na     201_aa hypothetical protein
5083 KB375285.1 GCA_000314675.2_05083 CDS open 82421-83188 768_na     255_aa hypothetical protein
5084 KB375285.1 GCA_000314675.2_05084 CDS open 83262-83651 390_na     129_aa hypothetical protein
5085 KB375285.1 GCA_000314675.2_05085 CDS open 83859-84809 951_na     316_aa hypothetical protein
5086 KB375285.1 GCA_000314675.2_05086 CDS open 86234-86857 624_na     207_aa bjaI Isovaleryl-homoserine lactone synthase
5087 KB375285.1 GCA_000314675.2_05087 CDS open 86885-87130 246_na     81_aa hypothetical protein
5088 KB375285.1 GCA_000314675.2_05088 CDS open 87143-87832 690_na     229_aa hypothetical protein
5089 KB375285.1 GCA_000314675.2_05089 CDS open 87829-88305 477_na     158_aa hypothetical protein
5090 KB375285.1 GCA_000314675.2_05090 CDS open 88320-88976 657_na     218_aa hypothetical protein
5091 KB375285.1 GCA_000314675.2_05091 CDS open 88988-89539 552_na     183_aa hypothetical protein
5092 KB375285.1 GCA_000314675.2_05092 CDS open 89536-90123 588_na     195_aa hypothetical protein
5093 KB375285.1 GCA_000314675.2_05093 CDS open 90110-90448 339_na     112_aa Single-stranded DNA-binding protein
5094 KB375285.1 GCA_000314675.2_05094 CDS open 90476-91078 603_na     200_aa hypothetical protein
5095 KB375285.1 GCA_000314675.2_05095 CDS open 91080-91571 492_na     163_aa hypothetical protein
5096 KB375285.1 GCA_000314675.2_05096 CDS open 91672-92370 699_na     232_aa hypothetical protein
5097 KB375285.1 GCA_000314675.2_05097 CDS open 92384-92686 303_na     100_aa hypothetical protein
5098 KB375285.1 GCA_000314675.2_05098 CDS open 92683-92979 297_na     98_aa hypothetical protein
5099 KB375285.1 GCA_000314675.2_05099 CDS open 92987-95398 2412_na     803_aa virB4_4 Type IV secretion system protein virB4
5100 KB375285.1 GCA_000314675.2_05100 CDS open 95395-96288 894_na     297_aa hypothetical protein
5101 KB375285.1 GCA_000314675.2_05101 CDS open 96300-97010 711_na     236_aa hypothetical protein
5102 KB375285.1 GCA_000314675.2_05102 CDS open 97088-97279 192_na     63_aa hypothetical protein
5103 KB375285.1 GCA_000314675.2_05103 CDS open 97482-98612 1131_na     376_aa hypothetical protein
5104 KB375285.1 GCA_000314675.2_05104 CDS open 98609-99322 714_na     237_aa virB8 Type IV secretion system protein virB8
5105 KB375285.1 GCA_000314675.2_05105 CDS open 99319-100122 804_na     267_aa virB9 Type IV secretion system protein virB9
5106 KB375285.1 GCA_000314675.2_05106 CDS open 100129-101475 1347_na     448_aa hypothetical protein
5107 KB375285.1 GCA_000314675.2_05107 CDS open 101438-102475 1038_na     345_aa Type IV secretion system protein VirB11
5108 KB375285.1 GCA_000314675.2_05108 CDS open 102472-104610 2139_na     712_aa hypothetical protein
5109 KB375285.1 GCA_000314675.2_05109 CDS open 104758-105486 729_na     242_aa rpaR HTH-type quorum sensing-dependent transcriptional regulator RpaR
5110 KB375285.1 GCA_000314675.2_05110 CDS open 105862-106515 654_na     217_aa hypothetical protein
5111 KB375285.1 GCA_000314675.2_05111 CDS open 107028-107945 918_na     305_aa hypothetical protein
5112 KB375285.1 GCA_000314675.2_05112 CDS open 108281-108916 636_na     211_aa hypothetical protein
5113 KB375285.1 GCA_000314675.2_05113 CDS open 108994-109491 498_na     165_aa hypothetical protein
5114 KB375285.1 GCA_000314675.2_05114 CDS open 109719-110021 303_na     100_aa hypothetical protein
5115 KB375285.1 GCA_000314675.2_05115 CDS open 110459-112381 1923_na     640_aa dnaK_3 Chaperone protein DnaK
5116 KB375285.1 GCA_000314675.2_05116 CDS open 112691-113338 648_na     215_aa hypothetical protein
5117 KB375285.1 GCA_000314675.2_05117 CDS open 113599-115128 1530_na     509_aa hypothetical protein
5118 KB375285.1 GCA_000314675.2_05118 CDS open 115118-115912 795_na     264_aa IS21 family transposase IS1600
5119 KB375285.1 GCA_000314675.2_05119 CDS open 116564-117391 828_na     275_aa hypothetical protein
5120 KB375285.1 GCA_000314675.2_05120 CDS open 117388-118938 1551_na     516_aa rox Rifampicin monooxygenase
5121 KB375285.1 GCA_000314675.2_05121 CDS open 119517-120017 501_na     166_aa hypothetical protein
5122 KB375285.1 GCA_000314675.2_05122 CDS open 120025-120408 384_na     127_aa hypothetical protein
5123 KB375285.1 GCA_000314675.2_05123 CDS open 120421-120861 441_na     146_aa hspA Spore protein SP21
5124 KB375285.1 GCA_000314675.2_05124 CDS open 120875-121804 930_na     309_aa kefB Glutathione-regulated potassium-efflux system protein KefB
5125 KB375285.1 GCA_000314675.2_05125 CDS open 121967-123085 1119_na     372_aa sasA_15 Adaptive-response sensory-kinase SasA
5126 KB375285.1 GCA_000314675.2_05126 CDS open 123720-124169 450_na     149_aa cheB_4 Protein-glutamate methylesteraseprotein-glutamine glutaminase
5127 KB375285.1 GCA_000314675.2_05127 CDS open 124166-126019 1854_na     617_aa ftsH4 ATP-dependent zinc metalloprotease FtsH 4
5128 KB375285.1 GCA_000314675.2_05128 CDS open 126034-127428 1395_na     464_aa degQ Periplasmic pH-dependent serine endoprotease DegQ
5129 KB375285.1 GCA_000314675.2_05129 CDS open 127524-127889 366_na     121_aa hypothetical protein