HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Rhodobacter capsulatus (GCA_000506565.2)

Select a Genome:
PROKKA Annotations for GCA_000506565.2
Genome Selected: Rhodobacter capsulatus
ContigsBases CDSrRNA tmRNAtRNA
36 3,760,694 3534 3 1 54
[Table]   [NA Fasta]   [AA Fasta]      [Browser]   [Text]   [Excel]  
Search & Sort all 3619 Records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:8]    |    Number of Records Found: 3619 [8 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
3501 AYQC01000032.1 GCA_000506565.2_03501 CDS open 445-783 339_na     112_aa nifW Nitrogenase-stabilizingprotective protein NifW
3502 AYQC01000032.1 GCA_000506565.2_03502 CDS open 813-1958 1146_na     381_aa frbC 2-phosphonomethylmalate synthase
3503 AYQC01000032.1 GCA_000506565.2_03503 CDS open 1970-3130 1161_na     386_aa nifS_2 Cysteine desulfurase NifS
3504 AYQC01000032.1 GCA_000506565.2_03504 CDS open 3133-3540 408_na     135_aa hypothetical protein
3505 AYQC01000032.1 GCA_000506565.2_03505 CDS open 3551-3871 321_na     106_aa hesB1 Protein HesB%2C heterocyst
3506 AYQC01000032.1 GCA_000506565.2_03506 CDS open 4038-4487 450_na     149_aa hypothetical protein
3507 AYQC01000032.1 GCA_000506565.2_03507 CDS open 4474-4974 501_na     166_aa hypothetical protein
3508 AYQC01000032.1 GCA_000506565.2_03508 CDS open 5000-5305 306_na     101_aa fdxB Ferredoxin-3
3509 AYQC01000032.1 GCA_000506565.2_03509 CDS open 5319-5516 198_na     65_aa hypothetical protein
3510 AYQC01000032.1 GCA_000506565.2_03510 CDS open 5518-5988 471_na     156_aa hypothetical protein
3511 AYQC01000032.1 GCA_000506565.2_03511 CDS open 5988-6467 480_na     159_aa hypothetical protein
3512 AYQC01000032.1 GCA_000506565.2_03512 CDS open 6442-7827 1386_na     461_aa nifK_3 Nitrogenase molybdenum-iron protein beta chain
3513 AYQC01000032.1 GCA_000506565.2_03513 CDS open 7829-9397 1569_na     522_aa nifD_2 Nitrogenase molybdenum-iron protein alpha chain
3514 AYQC01000032.1 GCA_000506565.2_03514 CDS open 9567-10106 540_na     179_aa Peroxiredoxin
3515 AYQC01000032.1 GCA_000506565.2_03515 CDS open 10258-11358 1101_na     366_aa hypothetical protein
3516 AYQC01000032.1 GCA_000506565.2_03516 CDS open 11355-11834 480_na     159_aa hypothetical protein
3517 AYQC01000032.1 GCA_000506565.2_03517 CDS open 11836-12033 198_na     65_aa fdxN Ferredoxin-1
3518 AYQC01000032.1 GCA_000506565.2_03518 CDS open 12077-12364 288_na     95_aa hypothetical protein
3519 AYQC01000032.1 GCA_000506565.2_03519 CDS open 12380-13687 1308_na     435_aa fprA Type A flavoprotein fprA
3520 AYQC01000032.1 GCA_000506565.2_03520 CDS open 14109-14690 582_na     193_aa rnfA Ion-translocating oxidoreductase complex subunit A
3521 AYQC01000032.1 GCA_000506565.2_03521 CDS open 14711-15274 564_na     187_aa rnfB Ion-translocating oxidoreductase complex subunit B
3522 AYQC01000032.1 GCA_000506565.2_03522 CDS open 15271-16830 1560_na     519_aa rnfC Ion-translocating oxidoreductase complex subunit C
3523 AYQC01000032.1 GCA_000506565.2_03523 CDS open 16827-17912 1086_na     361_aa rnfD Ion-translocating oxidoreductase complex subunit D
3524 AYQC01000032.1 GCA_000506565.2_03524 CDS open 17909-18562 654_na     217_aa rnfG Ion-translocating oxidoreductase complex subunit G
3525 AYQC01000032.1 GCA_000506565.2_03525 CDS open 18574-19305 732_na     243_aa rnfE Ion-translocating oxidoreductase complex subunit E
3526 AYQC01000032.1 GCA_000506565.2_03526 CDS open 19302-19559 258_na     85_aa hypothetical protein
3527 AYQC01000032.1 GCA_000506565.2_03527 CDS open 19595-20617 1023_na     340_aa hypothetical protein
3528 AYQC01000032.1 GCA_000506565.2_03528 CDS open 20690-20968 279_na     92_aa hypothetical protein
3529 AYQC01000032.1 GCA_000506565.2_03529 CDS open 20999-22513 1515_na     504_aa betC Choline-sulfatase
3530 AYQC01000032.1 GCA_000506565.2_03530 CDS open 22529-23473 945_na     314_aa hypothetical protein
3531 AYQC01000032.1 GCA_000506565.2_03531 CDS open 23577-24461 885_na     294_aa gcvA_3 Glycine cleavage system transcriptional activator
3532 AYQC01000032.1 GCA_000506565.2_03532 CDS open 24453-25019 567_na     188_aa hypothetical protein
3533 AYQC01000032.1 GCA_000506565.2_03533 CDS open 25116-26297 1182_na     393_aa chuR Anaerobic sulfatase-maturating enzyme
3534 AYQC01000032.1 GCA_000506565.2_03534 CDS open 26383-30237 3855_na     1284_aa hypothetical protein
3535 AYQC01000032.1 GCA_000506565.2_03535 CDS open 30351-30770 420_na     139_aa Acetyltransferase
3536 AYQC01000032.1 GCA_000506565.2_03536 CDS open 30767-31906 1140_na     379_aa dapE_2 Succinyl-diaminopimelate desuccinylase
3537 AYQC01000032.1 GCA_000506565.2_03537 CDS open 32185-32802 618_na     205_aa hypothetical protein
3538 AYQC01000032.1 GCA_000506565.2_03538 CDS open 32810-33910 1101_na     366_aa hypothetical protein
3539 AYQC01000032.1 GCA_000506565.2_03539 CDS open 34074-35717 1644_na     547_aa mcd (2S)-methylsuccinyl-CoA dehydrogenase
3540 AYQC01000032.1 GCA_000506565.2_03540 CDS open 35762-36265 504_na     167_aa L-methionine sulfoximineL-methionine sulfone acetyltransferase
3541 AYQC01000032.1 GCA_000506565.2_03541 CDS open 36256-36978 723_na     240_aa recO DNA repair protein RecO
3542 AYQC01000032.1 GCA_000506565.2_03542 CDS open 37061-37396 336_na     111_aa hypothetical protein
3543 AYQC01000032.1 GCA_000506565.2_03543 CDS open 37399-38310 912_na     303_aa era GTPase Era
3544 AYQC01000032.1 GCA_000506565.2_03544 CDS open 38307-38993 687_na     228_aa rnc Ribonuclease 3
3545 AYQC01000032.1 GCA_000506565.2_03545 CDS open 38990-39787 798_na     265_aa lepB Signal peptidase I
3546 AYQC01000032.1 GCA_000506565.2_03546 CDS open 39840-40241 402_na     133_aa acpS Holo-[acyl-carrier-protein] synthase
3547 AYQC01000032.1 GCA_000506565.2_03547 CDS open 40238-40684 447_na     148_aa hypothetical protein
3548 AYQC01000032.1 GCA_000506565.2_03548 CDS open 40700-41443 744_na     247_aa pdxJ Pyridoxine 5-phosphate synthase
3549 AYQC01000032.1 GCA_000506565.2_03549 CDS open 41505-42176 672_na     223_aa hypothetical protein
3550 AYQC01000032.1 GCA_000506565.2_03550 CDS open 42195-44312 2118_na     705_aa rsh GTP pyrophosphokinase rsh
3551 AYQC01000032.1 GCA_000506565.2_03551 CDS open 44332-44685 354_na     117_aa rpoZ DNA-directed RNA polymerase subunit omega
3552 AYQC01000032.1 GCA_000506565.2_03552 CDS open 44758-45249 492_na     163_aa hypothetical protein
3553 AYQC01000032.1 GCA_000506565.2_03553 CDS open 45478-46059 582_na     193_aa hypothetical protein
3554 AYQC01000032.1 GCA_000506565.2_03554 CDS open 46266-46919 654_na     217_aa rluA Dual-specificity RNA pseudouridine synthase RluA
3555 AYQC01000032.1 GCA_000506565.2_03555 CDS open 46958-47413 456_na     151_aa msrC Free methionine-R-sulfoxide reductase
3556 AYQC01000032.1 GCA_000506565.2_03556 CDS open 47505-47852 348_na     115_aa hypothetical protein
3557 AYQC01000032.1 GCA_000506565.2_03557 CDS open 47842-48333 492_na     163_aa hypothetical protein
3558 AYQC01000032.1 GCA_000506565.2_03558 CDS open 48326-48652 327_na     108_aa hspQ Heat shock protein HspQ
3559 AYQC01000032.1 GCA_000506565.2_03559 CDS open 48840-49415 576_na     191_aa hypothetical protein
3560 AYQC01000032.1 GCA_000506565.2_03560 CDS open 49423-50034 612_na     203_aa lolA Outer-membrane lipoprotein carrier protein
3561 AYQC01000032.1 GCA_000506565.2_03561 CDS open 50118-53252 3135_na     1044_aa hypothetical protein
3562 AYQC01000032.1 GCA_000506565.2_03562 CDS open 53265-54443 1179_na     392_aa dapL LL-diaminopimelate aminotransferase
3563 AYQC01000032.1 GCA_000506565.2_03563 CDS open 54561-55877 1317_na     438_aa cnbH 2-amino-5-chloromuconic acid deaminase
3564 AYQC01000032.1 GCA_000506565.2_03564 CDS open 55956-57182 1227_na     408_aa ubiL_2 Ubiquinone hydroxylase UbiL
3565 AYQC01000032.1 GCA_000506565.2_03565 CDS open 57179-57391 213_na     70_aa hypothetical protein
3566 AYQC01000032.1 GCA_000506565.2_03566 CDS open 57388-58032 645_na     214_aa hypothetical protein
3567 AYQC01000032.1 GCA_000506565.2_03567 CDS open 58053-58964 912_na     303_aa cnoX Chaperedoxin
3568 AYQC01000032.1 GCA_000506565.2_03568 CDS open 59032-59820 789_na     262_aa xthA_2 Exodeoxyribonuclease III
3569 AYQC01000032.1 GCA_000506565.2_03569 CDS open 59908-61344 1437_na     478_aa ramB_2 HTH-type transcriptional regulator RamB
3570 AYQC01000032.1 GCA_000506565.2_03570 CDS open 61500-63122 1623_na     540_aa aceB Malate synthase A
3571 AYQC01000032.1 GCA_000506565.2_03571 CDS open 63246-64856 1611_na     536_aa aceA Isocitrate lyase
3572 AYQC01000032.1 GCA_000506565.2_03572 CDS open 64933-66075 1143_na     380_aa hypothetical protein
3573 AYQC01000032.1 misc_RNA open 66160-66364 Cobalamin
3574 AYQC01000032.1 misc_RNA open 66549-66736 Cobalamin
3575 AYQC01000032.1 GCA_000506565.2_03575 CDS open 66829-68859 2031_na     676_aa nrdD Anaerobic ribonucleoside-triphosphate reductase
3576 AYQC01000032.1 GCA_000506565.2_03576 CDS open 68877-69065 189_na     62_aa hypothetical protein
3577 AYQC01000032.1 GCA_000506565.2_03577 CDS open 69058-69675 618_na     205_aa queE 7-carboxy-7-deazaguanine synthase
3578 AYQC01000032.1 GCA_000506565.2_03578 CDS open 69688-71055 1368_na     455_aa prpR HTH-type transcriptional regulator PrpR
3579 AYQC01000032.1 GCA_000506565.2_03579 CDS open 71187-71570 384_na     127_aa putative acyl-CoA thioester hydrolase
3580 AYQC01000032.1 GCA_000506565.2_03580 CDS open 71592-73103 1512_na     503_aa prpD2 2-methylcitrate dehydratase 2
3581 AYQC01000032.1 GCA_000506565.2_03581 CDS open 73114-74289 1176_na     391_aa prpC 2-methylcitrate synthase
3582 AYQC01000032.1 GCA_000506565.2_03582 CDS open 74293-75204 912_na     303_aa mmgF 2-methylisocitrate lyase
3583 AYQC01000032.1 GCA_000506565.2_03583 CDS open 75215-76264 1050_na     349_aa hmp 3-ketosteroid-9-alpha-monooxygenase%2C ferredoxin reductase component
3584 AYQC01000032.1 GCA_000506565.2_03584 CDS open 76268-77503 1236_na     411_aa Carnitine monooxygenase oxygenase subunit
3585 AYQC01000032.1 misc_RNA open 77559-77756 Cobalamin
3586 AYQC01000032.1 GCA_000506565.2_03586 CDS open 77816-80542 2727_na     908_aa metH_3 Methionine synthase
3587 AYQC01000032.1 GCA_000506565.2_03587 CDS open 80539-81576 1038_na     345_aa metH_4 Methionine synthase
3588 AYQC01000032.1 GCA_000506565.2_03588 CDS open 81687-83141 1455_na     484_aa cobQ_2 Cobyric acid synthase
3589 AYQC01000032.1 GCA_000506565.2_03589 CDS open 83138-84712 1575_na     524_aa cobQ_3 Cobyric acid synthase
3590 AYQC01000032.1 GCA_000506565.2_03590 CDS open 84783-85130 348_na     115_aa hypothetical protein
3591 AYQC01000032.1 misc_RNA open 85302-85489 Cobalamin
3592 AYQC01000032.1 misc_RNA open 85604-85767 Cobalamin
3593 AYQC01000032.1 GCA_000506565.2_03593 CDS open 85921-86817 897_na     298_aa hypothetical protein
3594 AYQC01000032.1 misc_RNA open 86837-87032 Cobalamin
3595 AYQC01000032.1 GCA_000506565.2_03595 CDS open 87157-89007 1851_na     616_aa btuB Vitamin B12 transporter BtuB
3596 AYQC01000032.1 GCA_000506565.2_03596 CDS open 89058-89915 858_na     285_aa hypothetical protein
3597 AYQC01000032.1 GCA_000506565.2_03597 CDS open 89912-90895 984_na     327_aa hmuU_3 Hemin transport system permease protein HmuU
3598 AYQC01000032.1 GCA_000506565.2_03598 CDS open 90892-91626 735_na     244_aa fecE Fe(3+) dicitrate transport ATP-binding protein FecE
3599 AYQC01000032.1 GCA_000506565.2_03599 CDS open 91623-92309 687_na     228_aa hypothetical protein
3600 AYQC01000032.1 GCA_000506565.2_03600 CDS open 92526-93473 948_na     315_aa bioB Biotin synthase
3601 AYQC01000032.1 GCA_000506565.2_03601 CDS open 93470-94603 1134_na     377_aa bioF 8-amino-7-oxononanoate synthase 2
3602 AYQC01000032.1 GCA_000506565.2_03602 CDS open 94600-95217 618_na     205_aa bioD1 ATP-dependent dethiobiotin synthetase BioD 1
3603 AYQC01000032.1 GCA_000506565.2_03603 CDS open 95214-96485 1272_na     423_aa bioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
3604 AYQC01000032.1 GCA_000506565.2_03604 CDS open 96485-97081 597_na     198_aa hypothetical protein
3605 AYQC01000032.1 GCA_000506565.2_03605 CDS open 97078-97806 729_na     242_aa tam Trans-aconitate 2-methyltransferase
3606 AYQC01000032.1 GCA_000506565.2_03606 CDS open 97849-98472 624_na     207_aa glaR HTH-type transcriptional repressor GlaR
3607 AYQC01000032.1 GCA_000506565.2_03607 CDS open 98653-99456 804_na     267_aa trpI HTH-type transcriptional regulator TrpI
3608 AYQC01000032.1 GCA_000506565.2_03608 CDS open 99572-100336 765_na     254_aa fabI_3 Enoyl-[acyl-carrier-protein] reductase [NADH] FabI
3609 AYQC01000032.1 GCA_000506565.2_03609 CDS open 100347-102914 2568_na     855_aa hypothetical protein
3610 AYQC01000032.1 GCA_000506565.2_03610 CDS open 102911-104095 1185_na     394_aa ackA_2 Acetate kinase
3611 AYQC01000032.1 GCA_000506565.2_03611 CDS open 104384-105175 792_na     263_aa phnX Phosphonoacetaldehyde hydrolase
3612 AYQC01000032.1 GCA_000506565.2_03612 CDS open 105370-105768 399_na     132_aa hypothetical protein
3613 AYQC01000032.1 GCA_000506565.2_03613 CDS open 105974-106219 246_na     81_aa hypothetical protein
3614 AYQC01000033.1 GCA_000506565.2_03614 CDS open 64-3072 3009_na     1002_aa dltA D-alanine--D-alanyl carrier protein ligase
3615 AYQC01000033.1 tRNA open 3272-3348 tRNA-Met(cat)
3616 AYQC01000034.1 tRNA open 1-77 tRNA-Met(cat)
3617 AYQC01000034.1 rRNA open 151-259 5S ribosomal RNA
3618 AYQC01000034.1 rRNA open 411-3232 23S ribosomal RNA
3619 AYQC01000035.1 rRNA open 57-1520 16S ribosomal RNA