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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Limosilactobacillus panis (GCA_001027985.1)

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PROKKA Annotations for GCA_001027985.1
Genome Selected: Limosilactobacillus panis
ContigsBases CDSrRNA tmRNAtRNA
219 2082789 1937 12 1 61
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:5]    |    Number of Records Found: 2075 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 LDPB01000094.1 GCA_001027985.1_02001 CDS open 6602-8029 1428_na     475_aa pdhD Dihydrolipoyl dehydrogenase
2002 LDPB01000094.1 GCA_001027985.1_02002 CDS open 8160-8444 285_na     94_aa hypothetical protein
2003 LDPB01000094.1 GCA_001027985.1_02003 CDS open 8444-9211 768_na     255_aa suhB Fructose-1%2C6-bisphosphataseinositol-1-monophosphatase
2004 LDPB01000094.1 GCA_001027985.1_02004 CDS open 9317-11161 1845_na     614_aa typA GTP-binding protein TypABipA
2005 LDPB01000094.1 GCA_001027985.1_02005 CDS open 11310-12530 1221_na     406_aa ftsW putative peptidoglycan glycosyltransferase FtsW
2006 LDPB01000094.1 GCA_001027985.1_02006 CDS open 12530-12814 285_na     94_aa hypothetical protein
2007 LDPB01000094.1 GCA_001027985.1_02007 CDS open 12811-13371 561_na     186_aa rsmD Ribosomal RNA small subunit methyltransferase D
2008 LDPB01000094.1 GCA_001027985.1_02008 CDS open 13376-13897 522_na     173_aa coaD Phosphopantetheine adenylyltransferase
2009 LDPB01000094.1 GCA_001027985.1_02009 CDS open 13881-14930 1050_na     349_aa ylbL putative protein YlbL
2010 LDPB01000094.1 GCA_001027985.1_02010 CDS open 15012-15635 624_na     207_aa comEA ComE operon protein 1
2011 LDPB01000094.1 GCA_001027985.1_02011 CDS open 15694-16185 492_na     163_aa tadA_2 tRNA-specific adenosine deaminase
2012 LDPB01000094.1 GCA_001027985.1_02012 CDS open 16213-18456 2244_na     747_aa comEC ComE operon protein 3
2013 LDPB01000094.1 GCA_001027985.1_02013 CDS open 18426-19445 1020_na     339_aa yqeN putative protein YqeN
2014 LDPB01000094.1 GCA_001027985.1_02014 CDS open 19553-19807 255_na     84_aa rpsT 30S ribosomal protein S20
2015 LDPB01000094.1 GCA_001027985.1_02015 CDS open 20060-20329 270_na     89_aa rpsO 30S ribosomal protein S15
2016 LDPB01000094.1 GCA_001027985.1_02016 CDS open 20540-21703 1164_na     387_aa IS200IS605 family transposase ISLhe65
2017 LDPB01000094.1 GCA_001027985.1_02017 CDS open 21955-23787 1833_na     610_aa rnj2 Ribonuclease J 2
2018 LDPB01000094.1 GCA_001027985.1_02018 CDS open 23929-24837 909_na     302_aa hypothetical protein
2019 LDPB01000094.1 GCA_001027985.1_02019 CDS open 25018-26208 1191_na     396_aa tuf Elongation factor Tu
2020 LDPB01000094.1 GCA_001027985.1_02020 CDS open 26396-27709 1314_na     437_aa tig Trigger factor
2021 LDPB01000094.1 GCA_001027985.1_02021 CDS open 28084-29133 1050_na     349_aa IS200IS605 family transposase ISLhe65
2022 LDPB01000094.1 GCA_001027985.1_02022 CDS open 29348-30598 1251_na     416_aa clpX ATP-dependent Clp protease ATP-binding subunit ClpX
2023 LDPB01000094.1 GCA_001027985.1_02023 CDS open 30619-31215 597_na     198_aa engB putative GTP-binding protein EngB
2024 LDPB01000094.1 GCA_001027985.1_02024 CDS open 31212-31517 306_na     101_aa hypothetical protein
2025 LDPB01000094.1 GCA_001027985.1_02025 CDS open 31603-31740 138_na     45_aa hypothetical protein
2026 LDPB01000094.1 GCA_001027985.1_02026 CDS open 31882-33693 1812_na     603_aa uvrC UvrABC system protein C
2027 LDPB01000094.1 GCA_001027985.1_02027 CDS open 33760-35082 1323_na     440_aa obg GTPase Obg
2028 LDPB01000094.1 GCA_001027985.1_02028 CDS open 35110-36039 930_na     309_aa rnz Ribonuclease Z
2029 LDPB01000094.1 GCA_001027985.1_02029 CDS open 36053-36886 834_na     277_aa hypothetical protein
2030 LDPB01000094.1 GCA_001027985.1_02030 CDS open 37003-39312 2310_na     769_aa hypothetical protein
2031 LDPB01000094.1 GCA_001027985.1_02031 CDS open 39331-39849 519_na     172_aa apt Adenine phosphoribosyltransferase
2032 LDPB01000094.1 GCA_001027985.1_02032 CDS open 39920-40516 597_na     198_aa hypothetical protein
2033 LDPB01000094.1 tRNA open 40589-40677 tRNA-Ser(cga)
2034 LDPB01000094.1 GCA_001027985.1_02034 CDS open 40947-41654 708_na     235_aa rnhA_2 Ribonuclease H
2035 LDPB01000094.1 GCA_001027985.1_02035 CDS open 41659-42816 1158_na     385_aa mvaS Hydroxymethylglutaryl-CoA synthase
2036 LDPB01000094.1 GCA_001027985.1_02036 CDS open 42875-43501 627_na     208_aa lexA LexA repressor
2037 LDPB01000095.1 GCA_001027985.1_02037 CDS open 114-365 252_na     83_aa hypothetical protein
2038 LDPB01000095.1 GCA_001027985.1_02038 CDS open 446-664 219_na     72_aa hypothetical protein
2039 LDPB01000095.1 GCA_001027985.1_02039 CDS open 895-1533 639_na     212_aa plsC 1-acyl-sn-glycerol-3-phosphate acyltransferase
2040 LDPB01000095.1 GCA_001027985.1_02040 CDS open 1624-2385 762_na     253_aa yfiC tRNA1(Val) (adenine(37)-N6)-methyltransferase
2041 LDPB01000095.1 GCA_001027985.1_02041 CDS open 2372-2692 321_na     106_aa hypothetical protein
2042 LDPB01000095.1 GCA_001027985.1_02042 CDS open 2843-3631 789_na     262_aa rpsB 30S ribosomal protein S2
2043 LDPB01000095.1 GCA_001027985.1_02043 CDS open 3743-4618 876_na     291_aa tsf Elongation factor Ts
2044 LDPB01000095.1 GCA_001027985.1_02044 CDS open 4692-5414 723_na     240_aa pyrH Uridylate kinase
2045 LDPB01000095.1 GCA_001027985.1_02045 CDS open 5418-5978 561_na     186_aa frr Ribosome-recycling factor
2046 LDPB01000095.1 GCA_001027985.1_02046 CDS open 6143-6907 765_na     254_aa uppS Ditrans%2Cpolycis-undecaprenyl-diphosphate synthase ((2E%2C6E)-farnesyl-diphosphate specific)
2047 LDPB01000095.1 GCA_001027985.1_02047 CDS open 6924-7709 786_na     261_aa hypothetical protein
2048 LDPB01000095.1 GCA_001027985.1_02048 CDS open 7722-8996 1275_na     424_aa Putative zinc metalloprotease
2049 LDPB01000095.1 GCA_001027985.1_02049 CDS open 9021-10760 1740_na     579_aa proS Proline--tRNA ligase
2050 LDPB01000095.1 GCA_001027985.1_02050 CDS open 10816-15144 4329_na     1442_aa polC_2 DNA polymerase III PolC-type
2051 LDPB01000095.1 GCA_001027985.1_02051 CDS open 15309-15542 234_na     77_aa hypothetical protein
2052 LDPB01000095.1 GCA_001027985.1_02052 CDS open 15549-17753 2205_na     734_aa hypothetical protein
2053 LDPB01000095.1 GCA_001027985.1_02053 CDS open 17984-18496 513_na     170_aa rimP Ribosome maturation factor RimP
2054 LDPB01000095.1 GCA_001027985.1_02054 CDS open 18514-19707 1194_na     397_aa nusA Transcription terminationantitermination protein NusA
2055 LDPB01000095.1 GCA_001027985.1_02055 CDS open 19750-20031 282_na     93_aa hypothetical protein
2056 LDPB01000095.1 GCA_001027985.1_02056 CDS open 20021-20332 312_na     103_aa rplGA putative ribosomal protein YlxQ
2057 LDPB01000095.1 GCA_001027985.1_02057 CDS open 20345-22648 2304_na     767_aa infB Translation initiation factor IF-2
2058 LDPB01000095.1 GCA_001027985.1_02058 CDS open 22662-23021 360_na     119_aa rbfA Ribosome-binding factor A
2059 LDPB01000095.1 GCA_001027985.1_02059 CDS open 23090-23995 906_na     301_aa truB tRNA pseudouridine synthase B
2060 LDPB01000095.1 GCA_001027985.1_02060 CDS open 24007-24978 972_na     323_aa ribF Bifunctional riboflavin kinaseFMN adenylyltransferase
2061 LDPB01000096.1 GCA_001027985.1_02061 CDS open 270-1703 1434_na     477_aa pepDA_5 Dipeptidase A
2062 LDPB01000096.1 GCA_001027985.1_02062 CDS open 1971-2447 477_na     158_aa Putative universal stress protein
2063 LDPB01000096.1 misc_RNA open 2594-2753 group-II-D1D4-3
2064 LDPB01000098.1 tRNA open 466-540 tRNA-Gln(ttg)
2065 LDPB01000098.1 tRNA open 545-617 tRNA-Glu(ttc)
2066 LDPB01000098.1 GCA_001027985.1_02066 CDS open 671-910 240_na     79_aa hypothetical protein
2067 LDPB01000098.1 GCA_001027985.1_02067 CDS open 953-1699 747_na     248_aa hypothetical protein
2068 LDPB01000098.1 GCA_001027985.1_02068 CDS open 1919-2620 702_na     233_aa hypothetical protein
2069 LDPB01000098.1 GCA_001027985.1_02069 CDS open 2772-3866 1095_na     364_aa asd2 Aspartate-semialdehyde dehydrogenase 2
2070 LDPB01000098.1 GCA_001027985.1_02070 CDS open 3976-4632 657_na     218_aa hypothetical protein
2071 LDPB01000098.1 GCA_001027985.1_02071 CDS open 4804-5814 1011_na     336_aa hpr Hydroxypyruvate reductase
2072 LDPB01000098.1 GCA_001027985.1_02072 CDS open 5811-6242 432_na     143_aa hypothetical protein
2073 LDPB01000098.1 GCA_001027985.1_02073 CDS open 6343-6594 252_na     83_aa hypothetical protein
2074 LDPB01000098.1 GCA_001027985.1_02074 CDS open 6610-6783 174_na     57_aa hypothetical protein
2075 LDPB01000099.1 rRNA open 1-715 16S ribosomal RNA (partial)