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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Alloscardovia omnicolens (GCA_001056455.1)

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PROKKA Annotations for GCA_001056455.1
Genome Selected: Alloscardovia omnicolens
ContigsBases CDSrRNA tmRNAtRNA
21 1875004 1581 8 1 45
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Annotation Table [page:4]    |    Number of Records Found: 1644 [4 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
1501 JVKN01000003.1 GCA_001056455.1_01501 CDS open 160216-160644 429_na     142_aa hypothetical protein
1502 JVKN01000003.1 GCA_001056455.1_01502 CDS open 160701-161732 1032_na     343_aa hypothetical protein
1503 JVKN01000003.1 GCA_001056455.1_01503 CDS open 161758-162207 450_na     149_aa hypothetical protein
1504 JVKN01000003.1 GCA_001056455.1_01504 CDS open 162326-165220 2895_na     964_aa hypothetical protein
1505 JVKN01000003.1 GCA_001056455.1_01505 CDS open 165418-165858 441_na     146_aa hypothetical protein
1506 JVKN01000003.1 GCA_001056455.1_01506 CDS open 166052-166279 228_na     75_aa hypothetical protein
1507 JVKN01000003.1 GCA_001056455.1_01507 CDS open 166276-166647 372_na     123_aa hypothetical protein
1508 JVKN01000003.1 GCA_001056455.1_01508 CDS open 166700-166993 294_na     97_aa hypothetical protein
1509 JVKN01000003.1 GCA_001056455.1_01509 CDS open 166960-167244 285_na     94_aa hypothetical protein
1510 JVKN01000003.1 GCA_001056455.1_01510 CDS open 167201-167620 420_na     139_aa hypothetical protein
1511 JVKN01000003.1 misc_RNA open 167917-167975 msiK
1512 JVKN01000003.1 GCA_001056455.1_01512 CDS open 167976-169103 1128_na     375_aa msiK Diacetylchitobiose uptake system ATP-binding protein MsiK
1513 JVKN01000003.1 GCA_001056455.1_01513 CDS open 169246-170622 1377_na     458_aa hypothetical protein
1514 JVKN01000003.1 GCA_001056455.1_01514 CDS open 170671-171654 984_na     327_aa putative tRNArRNA methyltransferase
1515 JVKN01000003.1 GCA_001056455.1_01515 CDS open 171833-172015 183_na     60_aa nagB_1 Glucosamine-6-phosphate deaminase
1516 JVKN01000003.1 GCA_001056455.1_01516 CDS open 172005-172589 585_na     194_aa nagB_2 Glucosamine-6-phosphate deaminase
1517 JVKN01000003.1 GCA_001056455.1_01517 CDS open 172664-173980 1317_na     438_aa hutI Imidazolonepropionase
1518 JVKN01000003.1 GCA_001056455.1_01518 CDS open 174044-175675 1632_na     543_aa hypothetical protein
1519 JVKN01000003.1 GCA_001056455.1_01519 CDS open 175917-178925 3009_na     1002_aa Calcium-transporting ATPase 1
1520 JVKN01000003.1 GCA_001056455.1_01520 CDS open 179194-180231 1038_na     345_aa hypothetical protein
1521 JVKN01000003.1 GCA_001056455.1_01521 CDS open 180234-180989 756_na     251_aa hypothetical protein
1522 JVKN01000003.1 GCA_001056455.1_01522 CDS open 180982-181581 600_na     199_aa dcd dCTP deaminase%2C dUMP-forming
1523 JVKN01000003.1 GCA_001056455.1_01523 CDS open 181678-182310 633_na     210_aa hypothetical protein
1524 JVKN01000003.1 GCA_001056455.1_01524 CDS open 182388-183185 798_na     265_aa hypothetical protein
1525 JVKN01000003.1 GCA_001056455.1_01525 CDS open 183195-183608 414_na     137_aa hypothetical protein
1526 JVKN01000003.1 GCA_001056455.1_01526 CDS open 183655-184860 1206_na     401_aa ftsY Signal recognition particle receptor FtsY
1527 JVKN01000003.1 GCA_001056455.1_01527 CDS open 185652-186938 1287_na     428_aa amt Ammonia channel
1528 JVKN01000003.1 GCA_001056455.1_01528 CDS open 186938-187276 339_na     112_aa glnB Nitrogen regulatory protein P-II
1529 JVKN01000003.1 GCA_001056455.1_01529 CDS open 187273-188760 1488_na     495_aa mdtK Multidrug resistance protein MdtK
1530 JVKN01000003.1 GCA_001056455.1_01530 CDS open 189110-190549 1440_na     479_aa hypothetical protein
1531 JVKN01000003.1 GCA_001056455.1_01531 CDS open 190588-191910 1323_na     440_aa murT Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit MurT
1532 JVKN01000003.1 GCA_001056455.1_01532 CDS open 191910-192701 792_na     263_aa gatD Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD
1533 JVKN01000003.1 GCA_001056455.1_01533 CDS open 192791-193264 474_na     157_aa hypothetical protein
1534 JVKN01000005.1 GCA_001056455.1_01534 CDS open 598-1962 1365_na     454_aa brnQ Branched-chain amino acid transport system 2 carrier protein
1535 JVKN01000005.1 GCA_001056455.1_01535 CDS open 1995-2621 627_na     208_aa lacA Galactoside O-acetyltransferase
1536 JVKN01000005.1 GCA_001056455.1_01536 CDS open 2709-3551 843_na     280_aa putative oxidoreductaseMSMEI_2347
1537 JVKN01000005.1 GCA_001056455.1_01537 CDS open 3562-4596 1035_na     344_aa namA NADPH dehydrogenase
1538 JVKN01000005.1 GCA_001056455.1_01538 CDS open 4667-5293 627_na     208_aa hypothetical protein
1539 JVKN01000005.1 GCA_001056455.1_01539 CDS open 5295-7697 2403_na     800_aa ctpE Calcium-transporting ATPase CtpE
1540 JVKN01000005.1 GCA_001056455.1_01540 CDS open 7778-8530 753_na     250_aa ybhL Inner membrane protein YbhL
1541 JVKN01000005.1 GCA_001056455.1_01541 CDS open 8570-9319 750_na     249_aa ywaC GTP pyrophosphokinase YwaC
1542 JVKN01000005.1 GCA_001056455.1_01542 CDS open 9461-10999 1539_na     512_aa miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
1543 JVKN01000005.1 GCA_001056455.1_01543 CDS open 10983-12245 1263_na     420_aa miaA tRNA dimethylallyltransferase
1544 JVKN01000005.1 GCA_001056455.1_01544 CDS open 12483-15299 2817_na     938_aa hypothetical protein
1545 JVKN01000005.1 GCA_001056455.1_01545 CDS open 15302-15940 639_na     212_aa pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
1546 JVKN01000005.1 GCA_001056455.1_01546 CDS open 15953-16459 507_na     168_aa cinA Putative competence-damage inducible protein
1547 JVKN01000005.1 GCA_001056455.1_01547 CDS open 16580-17110 531_na     176_aa hypothetical protein
1548 JVKN01000005.1 GCA_001056455.1_01548 CDS open 17173-17412 240_na     79_aa hypothetical protein
1549 JVKN01000005.1 GCA_001056455.1_01549 CDS open 17555-18643 1089_na     362_aa recA Protein RecA
1550 JVKN01000005.1 GCA_001056455.1_01550 CDS open 18657-19292 636_na     211_aa recX Regulatory protein RecX
1551 JVKN01000005.1 misc_RNA open 19298-19689 RNaseP_bact_a
1552 JVKN01000005.1 GCA_001056455.1_01552 CDS open 19825-20475 651_na     216_aa hpf Ribosome hibernation promotion factor
1553 JVKN01000005.1 GCA_001056455.1_01553 CDS open 20632-23487 2856_na     951_aa secA Protein translocase subunit SecA
1554 JVKN01000005.1 GCA_001056455.1_01554 CDS open 23644-24615 972_na     323_aa glkA Glucokinase
1555 JVKN01000005.1 GCA_001056455.1_01555 CDS open 24673-25167 495_na     164_aa hypothetical protein
1556 JVKN01000005.1 GCA_001056455.1_01556 CDS open 25198-25890 693_na     230_aa plsC 1-acyl-sn-glycerol-3-phosphate acyltransferase
1557 JVKN01000005.1 GCA_001056455.1_01557 CDS open 25940-27907 1968_na     655_aa spk1 Serinethreonine-protein kinase PK-1
1558 JVKN01000005.1 GCA_001056455.1_01558 CDS open 27924-29018 1095_na     364_aa hypothetical protein
1559 JVKN01000005.1 GCA_001056455.1_01559 CDS open 29180-29794 615_na     204_aa hypothetical protein
1560 JVKN01000005.1 GCA_001056455.1_01560 CDS open 29906-31456 1551_na     516_aa rpoD RNA polymerase sigma factor RpoD
1561 JVKN01000005.1 GCA_001056455.1_01561 CDS open 31651-33858 2208_na     735_aa gyrB_2 DNA gyrase subunit B
1562 JVKN01000005.1 GCA_001056455.1_01562 CDS open 34054-35238 1185_na     394_aa hypothetical protein
1563 JVKN01000005.1 GCA_001056455.1_01563 CDS open 35274-37961 2688_na     895_aa gyrA_2 DNA gyrase subunit A
1564 JVKN01000005.1 GCA_001056455.1_01564 CDS open 38268-39485 1218_na     405_aa hypothetical protein
1565 JVKN01000005.1 GCA_001056455.1_01565 CDS open 40486-41625 1140_na     379_aa hypothetical protein
1566 JVKN01000005.1 GCA_001056455.1_01566 CDS open 41994-42290 297_na     98_aa hypothetical protein
1567 JVKN01000005.1 GCA_001056455.1_01567 CDS open 42290-42769 480_na     159_aa dut Deoxyuridine 5-triphosphate nucleotidohydrolase
1568 JVKN01000005.1 GCA_001056455.1_01568 CDS open 42815-45172 2358_na     785_aa relA Bifunctional (p)ppGpp synthasehydrolase RelA
1569 JVKN01000005.1 GCA_001056455.1_01569 CDS open 45707-47080 1374_na     457_aa putative protein
1570 JVKN01000005.1 GCA_001056455.1_01570 CDS open 47147-48550 1404_na     467_aa hisS Histidine--tRNA ligase
1571 JVKN01000005.1 GCA_001056455.1_01571 CDS open 48775-50571 1797_na     598_aa aspS Aspartate--tRNA(AspAsn) ligase
1572 JVKN01000005.1 GCA_001056455.1_01572 CDS open 50876-51442 567_na     188_aa hypothetical protein
1573 JVKN01000005.1 GCA_001056455.1_01573 CDS open 51452-51736 285_na     94_aa hypothetical protein
1574 JVKN01000005.1 GCA_001056455.1_01574 CDS open 51903-54521 2619_na     872_aa hypothetical protein
1575 JVKN01000005.1 GCA_001056455.1_01575 CDS open 54523-56142 1620_na     539_aa putative AAA domain-containing protein
1576 JVKN01000005.1 GCA_001056455.1_01576 CDS open 56258-58162 1905_na     634_aa nadE Glutamine-dependent NAD(+) synthetase
1577 JVKN01000005.1 GCA_001056455.1_01577 CDS open 58333-60690 2358_na     785_aa pflB Formate acetyltransferase 1
1578 JVKN01000005.1 GCA_001056455.1_01578 CDS open 60801-61673 873_na     290_aa pflA Pyruvate formate-lyase 1-activating enzyme
1579 JVKN01000005.1 GCA_001056455.1_01579 CDS open 61713-63020 1308_na     435_aa rnd Ribonuclease D
1580 JVKN01000005.1 GCA_001056455.1_01580 CDS open 63085-64449 1365_na     454_aa tig Trigger factor
1581 JVKN01000005.1 misc_RNA open 64512-64598 TPP
1582 JVKN01000005.1 GCA_001056455.1_01582 CDS open 64587-65261 675_na     224_aa hypothetical protein
1583 JVKN01000005.1 GCA_001056455.1_01583 CDS open 65356-66603 1248_na     415_aa clcB Voltage-gated ClC-type chloride channel ClcB
1584 JVKN01000005.1 GCA_001056455.1_01584 CDS open 66675-67277 603_na     200_aa clpP1 ATP-dependent Clp protease proteolytic subunit 1
1585 JVKN01000005.1 GCA_001056455.1_01585 CDS open 67290-67937 648_na     215_aa clpP2 ATP-dependent Clp protease proteolytic subunit 2
1586 JVKN01000005.1 GCA_001056455.1_01586 CDS open 68038-69321 1284_na     427_aa clpX ATP-dependent Clp protease ATP-binding subunit ClpX
1587 JVKN01000005.1 GCA_001056455.1_01587 CDS open 69332-69979 648_na     215_aa cnbA Chloronitrobenzene nitroreductase
1588 JVKN01000005.1 tRNA open 70128-70201 tRNA-Asn(gtt)
1589 JVKN01000005.1 GCA_001056455.1_01589 CDS open 70753-71328 576_na     191_aa hypothetical protein
1590 JVKN01000005.1 GCA_001056455.1_01590 CDS open 71303-72766 1464_na     487_aa hypothetical protein
1591 JVKN01000005.1 GCA_001056455.1_01591 CDS open 72897-74021 1125_na     374_aa putative oxidoreductaseMSMEI_1564
1592 JVKN01000005.1 GCA_001056455.1_01592 CDS open 74211-74684 474_na     157_aa hypothetical protein
1593 JVKN01000005.1 GCA_001056455.1_01593 CDS open 74863-76908 2046_na     681_aa Long-chain-fatty-acid--CoA ligase FadD15
1594 JVKN01000005.1 GCA_001056455.1_01594 CDS open 76912-77397 486_na     161_aa def_2 Peptide deformylase
1595 JVKN01000005.1 GCA_001056455.1_01595 CDS open 77652-78470 819_na     272_aa rpsB 30S ribosomal protein S2
1596 JVKN01000005.1 GCA_001056455.1_01596 CDS open 78504-79358 855_na     284_aa tsf Elongation factor Ts
1597 JVKN01000005.1 GCA_001056455.1_01597 CDS open 79910-80626 717_na     238_aa pyrH Uridylate kinase
1598 JVKN01000005.1 GCA_001056455.1_01598 CDS open 80684-81238 555_na     184_aa frr Ribosome-recycling factor
1599 JVKN01000005.1 GCA_001056455.1_01599 CDS open 81812-82771 960_na     319_aa cdsA Phosphatidate cytidylyltransferase
1600 JVKN01000005.1 GCA_001056455.1_01600 CDS open 82789-83982 1194_na     397_aa rlmN putative dual-specificity RNA methyltransferase RlmN
1601 JVKN01000005.1 GCA_001056455.1_01601 CDS open 84010-84792 783_na     260_aa hisF Imidazole glycerol phosphate synthase subunit HisF
1602 JVKN01000005.1 GCA_001056455.1_01602 CDS open 84789-85151 363_na     120_aa hisI Phosphoribosyl-AMP cyclohydrolase
1603 JVKN01000005.1 GCA_001056455.1_01603 CDS open 85192-86331 1140_na     379_aa lgt Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase
1604 JVKN01000005.1 GCA_001056455.1_01604 CDS open 86372-87037 666_na     221_aa rpe Ribulose-phosphate 3-epimerase
1605 JVKN01000005.1 GCA_001056455.1_01605 CDS open 87034-87297 264_na     87_aa hisE Phosphoribosyl-ATP pyrophosphatase
1606 JVKN01000005.1 GCA_001056455.1_01606 CDS open 87325-88176 852_na     283_aa hisG ATP phosphoribosyltransferase
1607 JVKN01000005.1 GCA_001056455.1_01607 CDS open 88186-88827 642_na     213_aa pgsA2 Putative cardiolipin synthase
1608 JVKN01000005.1 GCA_001056455.1_01608 CDS open 88817-89785 969_na     322_aa hypothetical protein
1609 JVKN01000005.1 GCA_001056455.1_01609 CDS open 89788-90120 333_na     110_aa hypothetical protein
1610 JVKN01000005.1 GCA_001056455.1_01610 CDS open 90132-90965 834_na     277_aa hypothetical protein
1611 JVKN01000005.1 GCA_001056455.1_01611 CDS open 90971-91408 438_na     145_aa hypothetical protein
1612 JVKN01000005.1 GCA_001056455.1_01612 CDS open 91474-92130 657_na     218_aa putative HTH-type transcriptional regulator
1613 JVKN01000005.1 GCA_001056455.1_01613 CDS open 92344-92520 177_na     58_aa hypothetical protein
1614 JVKN01000005.1 GCA_001056455.1_01614 CDS open 92532-92735 204_na     67_aa hypothetical protein
1615 JVKN01000005.1 GCA_001056455.1_01615 CDS open 92735-92866 132_na     43_aa hypothetical protein
1616 JVKN01000005.1 GCA_001056455.1_01616 CDS open 92900-94225 1326_na     441_aa hypothetical protein
1617 JVKN01000005.1 GCA_001056455.1_01617 CDS open 94227-94517 291_na     96_aa hypothetical protein
1618 JVKN01000005.1 GCA_001056455.1_01618 CDS open 94514-95209 696_na     231_aa hypothetical protein
1619 JVKN01000005.1 GCA_001056455.1_01619 CDS open 95317-96402 1086_na     361_aa hypothetical protein
1620 JVKN01000005.1 GCA_001056455.1_01620 CDS open 96405-97118 714_na     237_aa putative protein
1621 JVKN01000005.1 GCA_001056455.1_01621 CDS open 97111-97458 348_na     115_aa rbpA RNA polymerase-binding protein RbpA
1622 JVKN01000005.1 GCA_001056455.1_01622 CDS open 97530-100055 2526_na     841_aa hypothetical protein
1623 JVKN01000005.1 GCA_001056455.1_01623 CDS open 100072-100479 408_na     135_aa hypothetical protein
1624 JVKN01000005.1 GCA_001056455.1_01624 CDS open 100629-102575 1947_na     648_aa hypothetical protein
1625 JVKN01000005.1 GCA_001056455.1_01625 CDS open 103404-105587 2184_na     727_aa der GTPase Der
1626 JVKN01000005.1 GCA_001056455.1_01626 CDS open 105584-106357 774_na     257_aa putative RNA pseudouridine synthase
1627 JVKN01000005.1 GCA_001056455.1_01627 CDS open 106457-107422 966_na     321_aa aqpZ Aquaporin Z
1628 JVKN01000005.1 GCA_001056455.1_01628 CDS open 107481-107750 270_na     89_aa hypothetical protein
1629 JVKN01000005.1 GCA_001056455.1_01629 CDS open 107772-109367 1596_na     531_aa purH Bifunctional purine biosynthesis protein PurH
1630 JVKN01000005.1 GCA_001056455.1_01630 CDS open 109360-110775 1416_na     471_aa hypothetical protein
1631 JVKN01000005.1 GCA_001056455.1_01631 CDS open 110778-111698 921_na     306_aa sucD Succinate--CoA ligase [ADP-forming] subunit alpha
1632 JVKN01000005.1 GCA_001056455.1_01632 CDS open 111701-112945 1245_na     414_aa sucC Succinate--CoA ligase [ADP-forming] subunit beta
1633 JVKN01000005.1 GCA_001056455.1_01633 CDS open 112985-113563 579_na     192_aa apt Adenine phosphoribosyltransferase
1634 JVKN01000005.1 GCA_001056455.1_01634 CDS open 113583-113951 369_na     122_aa hypothetical protein
1635 JVKN01000005.1 GCA_001056455.1_01635 CDS open 113989-115062 1074_na     357_aa ruvB Holliday junction ATP-dependent DNA helicase RuvB
1636 JVKN01000005.1 GCA_001056455.1_01636 CDS open 115062-115703 642_na     213_aa ruvA Holliday junction ATP-dependent DNA helicase RuvA
1637 JVKN01000005.1 GCA_001056455.1_01637 CDS open 115761-116342 582_na     193_aa ruvC Crossover junction endodeoxyribonuclease RuvC
1638 JVKN01000005.1 GCA_001056455.1_01638 CDS open 116353-117108 756_na     251_aa putative transcriptional regulatory proteinMSMEI_2866
1639 JVKN01000005.1 GCA_001056455.1_01639 CDS open 117162-117785 624_na     207_aa Phosphatidylinositol phosphate synthase
1640 JVKN01000005.1 GCA_001056455.1_01640 CDS open 117790-118371 582_na     193_aa AP-4-A phosphorylase
1641 JVKN01000005.1 GCA_001056455.1_01641 CDS open 118435-120477 2043_na     680_aa thrS Threonine--tRNA ligase
1642 JVKN01000005.1 tRNA open 120674-120747 tRNA-Val(cac)
1643 JVKN01000005.1 tRNA open 120798-120871 tRNA-Val(gac)
1644 JVKN01000005.1 tRNA open 120886-120957 tRNA-Cys(gca)