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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Schaalia sp. HMT-180 (GCA_001057055.1)

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PROKKA Annotations for GCA_001057055.1
Genome Selected: Schaalia sp. HMT-180
ContigsBases CDSrRNA tmRNAtRNA
58 2,354,316 1993 12 1 45
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Annotation Table [page:5]    |    Number of Records Found: 2061 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 JVEY01000058.1 GCA_001057055.1_02001 CDS open 209170-209880 711_na     236_aa natR Transcriptional regulatory protein NatR
2002 JVEY01000058.1 GCA_001057055.1_02002 CDS open 210029-211171 1143_na     380_aa glf UDP-galactopyranose mutase
2003 JVEY01000058.1 GCA_001057055.1_02003 CDS open 211382-212965 1584_na     527_aa hypothetical protein
2004 JVEY01000058.1 GCA_001057055.1_02004 CDS open 212962-213123 162_na     53_aa hypothetical protein
2005 JVEY01000058.1 GCA_001057055.1_02005 CDS open 213127-213879 753_na     250_aa hypothetical protein
2006 JVEY01000058.1 GCA_001057055.1_02006 CDS open 213958-214827 870_na     289_aa rlmB 23S rRNA (guanosine-2-O-)-methyltransferase RlmB
2007 JVEY01000058.1 GCA_001057055.1_02007 CDS open 214838-215902 1065_na     354_aa pyrD Dihydroorotate dehydrogenase (quinone)
2008 JVEY01000058.1 GCA_001057055.1_02008 CDS open 215921-216574 654_na     217_aa hypothetical protein
2009 JVEY01000058.1 GCA_001057055.1_02009 CDS open 216766-217386 621_na     206_aa putative protein
2010 JVEY01000058.1 GCA_001057055.1_02010 CDS open 217427-218818 1392_na     463_aa argE Acetylornithine deacetylase
2011 JVEY01000058.1 GCA_001057055.1_02011 CDS open 218815-219774 960_na     319_aa hypothetical protein
2012 JVEY01000058.1 GCA_001057055.1_02012 CDS open 219860-220213 354_na     117_aa Protein
2013 JVEY01000058.1 GCA_001057055.1_02013 CDS open 220233-221222 990_na     329_aa hypothetical protein
2014 JVEY01000058.1 GCA_001057055.1_02014 CDS open 221337-221729 393_na     130_aa putative response regulatory protein
2015 JVEY01000058.1 GCA_001057055.1_02015 CDS open 221729-222784 1056_na     351_aa trpD Anthranilate phosphoribosyltransferase
2016 JVEY01000058.1 GCA_001057055.1_02016 CDS open 222792-224426 1635_na     544_aa Putative bifunctional exonucleaseendonuclease protein
2017 JVEY01000058.1 GCA_001057055.1_02017 CDS open 224567-225388 822_na     273_aa hypothetical protein
2018 JVEY01000058.1 GCA_001057055.1_02018 CDS open 225575-226792 1218_na     405_aa pfp Pyrophosphate--fructose 6-phosphate 1-phosphotransferase
2019 JVEY01000058.1 GCA_001057055.1_02019 CDS open 226842-228242 1401_na     466_aa aroH Phospho-2-dehydro-3-deoxyheptonate aldolase
2020 JVEY01000058.1 GCA_001057055.1_02020 CDS open 228335-230278 1944_na     647_aa spk1 Serinethreonine-protein kinase PK-1
2021 JVEY01000058.1 GCA_001057055.1_02021 CDS open 230377-230715 339_na     112_aa hypothetical protein
2022 JVEY01000058.1 GCA_001057055.1_02022 CDS open 230773-231876 1104_na     367_aa hypothetical protein
2023 JVEY01000058.1 GCA_001057055.1_02023 CDS open 232093-233577 1485_na     494_aa rpoD RNA polymerase sigma factor RpoD
2024 JVEY01000058.1 GCA_001057055.1_02024 CDS open 233713-234105 393_na     130_aa hypothetical protein
2025 JVEY01000058.1 GCA_001057055.1_02025 CDS open 234148-235404 1257_na     418_aa ftsY Signal recognition particle receptor FtsY
2026 JVEY01000058.1 GCA_001057055.1_02026 CDS open 235504-237087 1584_na     527_aa ffh Signal recognition particle protein
2027 JVEY01000058.1 GCA_001057055.1_02027 CDS open 237091-238197 1107_na     368_aa putative protein
2028 JVEY01000058.1 GCA_001057055.1_02028 CDS open 238417-238869 453_na     150_aa hypothetical protein
2029 JVEY01000058.1 GCA_001057055.1_02029 CDS open 238872-239111 240_na     79_aa hypothetical protein
2030 JVEY01000058.1 GCA_001057055.1_02030 CDS open 239201-239710 510_na     169_aa rimM Ribosome maturation factor RimM
2031 JVEY01000058.1 GCA_001057055.1_02031 CDS open 239712-241088 1377_na     458_aa trmD tRNA (guanine-N(1)-)-methyltransferase
2032 JVEY01000058.1 GCA_001057055.1_02032 CDS open 241237-241593 357_na     118_aa rplS 50S ribosomal protein L19
2033 JVEY01000058.1 GCA_001057055.1_02033 CDS open 241703-242449 747_na     248_aa hypothetical protein
2034 JVEY01000058.1 GCA_001057055.1_02034 CDS open 242449-243114 666_na     221_aa rnhB Ribonuclease HII
2035 JVEY01000058.1 GCA_001057055.1_02035 CDS open 243169-243468 300_na     99_aa putative protein
2036 JVEY01000058.1 GCA_001057055.1_02036 CDS open 243599-244039 441_na     146_aa hypothetical protein
2037 JVEY01000058.1 GCA_001057055.1_02037 CDS open 244036-245583 1548_na     515_aa comM Competence protein ComM
2038 JVEY01000058.1 GCA_001057055.1_02038 CDS open 245561-246742 1182_na     393_aa dprA_2 Putative DNA processing protein DprA
2039 JVEY01000058.1 GCA_001057055.1_02039 CDS open 246886-247797 912_na     303_aa xerC Tyrosine recombinase XerC
2040 JVEY01000058.1 GCA_001057055.1_02040 CDS open 247801-248328 528_na     175_aa hypothetical protein
2041 JVEY01000058.1 GCA_001057055.1_02041 CDS open 248686-249525 840_na     279_aa rpsB 30S ribosomal protein S2
2042 JVEY01000058.1 GCA_001057055.1_02042 CDS open 249551-250378 828_na     275_aa tsf Elongation factor Ts
2043 JVEY01000058.1 GCA_001057055.1_02043 CDS open 250509-251219 711_na     236_aa pyrH Uridylate kinase
2044 JVEY01000058.1 GCA_001057055.1_02044 CDS open 251258-251815 558_na     185_aa frr Ribosome-recycling factor
2045 JVEY01000058.1 GCA_001057055.1_02045 CDS open 251815-252726 912_na     303_aa cdsA Phosphatidate cytidylyltransferase
2046 JVEY01000058.1 GCA_001057055.1_02046 CDS open 252864-253991 1128_na     375_aa rlmN Dual-specificity RNA methyltransferase RlmN
2047 JVEY01000058.1 GCA_001057055.1_02047 CDS open 254122-254670 549_na     182_aa hypothetical protein
2048 JVEY01000058.1 GCA_001057055.1_02048 CDS open 254670-255941 1272_na     423_aa dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase
2049 JVEY01000058.1 GCA_001057055.1_02049 CDS open 255942-257183 1242_na     413_aa rip1 Zinc metalloprotease Rip1
2050 JVEY01000058.1 GCA_001057055.1_02050 CDS open 257308-258474 1167_na     388_aa ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)
2051 JVEY01000058.1 GCA_001057055.1_02051 CDS open 258508-259011 504_na     167_aa hypothetical protein
2052 JVEY01000058.1 GCA_001057055.1_02052 CDS open 259116-259535 420_na     139_aa hypothetical protein
2053 JVEY01000058.1 GCA_001057055.1_02053 CDS open 259602-261410 1809_na     602_aa proS Proline--tRNA ligase
2054 JVEY01000058.1 GCA_001057055.1_02054 CDS open 261412-261903 492_na     163_aa def_2 Peptide deformylase
2055 JVEY01000058.1 GCA_001057055.1_02055 CDS open 262075-262578 504_na     167_aa hypothetical protein
2056 JVEY01000058.1 GCA_001057055.1_02056 CDS open 262578-262943 366_na     121_aa hypothetical protein
2057 JVEY01000058.1 GCA_001057055.1_02057 CDS open 263064-264491 1428_na     475_aa aspA Aspartate ammonia-lyase
2058 JVEY01000058.1 GCA_001057055.1_02058 CDS open 264554-265150 597_na     198_aa hypothetical protein
2059 JVEY01000058.1 GCA_001057055.1_02059 CDS open 265330-268074 2745_na     914_aa aceE Pyruvate dehydrogenase E1 component
2060 JVEY01000058.1 GCA_001057055.1_02060 CDS open 268411-268812 402_na     133_aa putative protein
2061 JVEY01000058.1 tRNA open 268912-268986 tRNA-Val(tac)