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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Bifidobacterium scardovii (GCA_001059475.1)

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PROKKA Annotations for GCA_001059475.1
Genome Selected: Bifidobacterium scardovii
ContigsBases CDSrRNA tmRNAtRNA
150 3121288 2506 2 1 45
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Annotation Table [page:6]    |    Number of Records Found: 2567 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 JULC01000032.1 GCA_001059475.1_02501 CDS open 2051-4330 2280_na     759_aa priA putative primosomal protein N
2502 JULC01000032.1 GCA_001059475.1_02502 CDS open 4498-5802 1305_na     434_aa putative fatty acid methyltransferase
2503 JULC01000032.1 GCA_001059475.1_02503 CDS open 6033-7256 1224_na     407_aa metK S-adenosylmethionine synthase
2504 JULC01000032.1 GCA_001059475.1_02504 CDS open 7516-7800 285_na     94_aa rpoZ DNA-directed RNA polymerase subunit omega
2505 JULC01000032.1 GCA_001059475.1_02505 CDS open 7930-9411 1482_na     493_aa rep_3 ATP-dependent DNA helicase Rep
2506 JULC01000032.1 GCA_001059475.1_02506 CDS open 9562-11148 1587_na     528_aa hypothetical protein
2507 JULC01000032.1 GCA_001059475.1_02507 CDS open 11242-11466 225_na     74_aa hypothetical protein
2508 JULC01000032.1 GCA_001059475.1_02508 CDS open 11544-12452 909_na     302_aa yciV 5-3 exoribonuclease
2509 JULC01000032.1 GCA_001059475.1_02509 CDS open 12656-13336 681_na     226_aa hypothetical protein
2510 JULC01000032.1 GCA_001059475.1_02510 CDS open 13403-14326 924_na     307_aa dapF Diaminopimelate epimerase
2511 JULC01000032.1 GCA_001059475.1_02511 CDS open 14466-15257 792_na     263_aa yrpC Glutamate racemase 2
2512 JULC01000032.1 GCA_001059475.1_02512 CDS open 15486-16343 858_na     285_aa hypothetical protein
2513 JULC01000032.1 GCA_001059475.1_02513 CDS open 16586-16975 390_na     129_aa yccX Acylphosphatase
2514 JULC01000032.1 GCA_001059475.1_02514 CDS open 17141-18127 987_na     328_aa ghrB_2 Glyoxylatehydroxypyruvate reductase B
2515 JULC01000032.1 GCA_001059475.1_02515 CDS open 19048-19941 894_na     297_aa hypothetical protein
2516 JULC01000032.1 GCA_001059475.1_02516 CDS open 20359-21690 1332_na     443_aa O-acetyl-L-homoserine sulfhydrylase
2517 JULC01000032.1 GCA_001059475.1_02517 CDS open 21862-23055 1194_na     397_aa scmP N-acetylcysteine deacetylase
2518 JULC01000032.1 GCA_001059475.1_02518 CDS open 23520-24770 1251_na     416_aa metC Cystathionine beta-lyase
2519 JULC01000032.1 GCA_001059475.1_02519 CDS open 24975-27803 2829_na     942_aa btuD_27 Vitamin B12 import ATP-binding protein BtuD
2520 JULC01000032.1 GCA_001059475.1_02520 CDS open 27981-28493 513_na     170_aa hypothetical protein
2521 JULC01000032.1 GCA_001059475.1_02521 CDS open 28540-29370 831_na     276_aa hypothetical protein
2522 JULC01000032.1 GCA_001059475.1_02522 CDS open 29483-30301 819_na     272_aa hypothetical protein
2523 JULC01000032.1 GCA_001059475.1_02523 CDS open 30338-30436 99_na     32_aa hypothetical protein
2524 JULC01000032.1 GCA_001059475.1_02524 CDS open 30626-31471 846_na     281_aa hypothetical protein
2525 JULC01000032.1 GCA_001059475.1_02525 CDS open 31515-32738 1224_na     407_aa hypothetical protein
2526 JULC01000032.1 GCA_001059475.1_02526 CDS open 32872-34023 1152_na     383_aa xdh D-xylose dehydrogenase
2527 JULC01000032.1 GCA_001059475.1_02527 CDS open 34318-34569 252_na     83_aa hypothetical protein
2528 JULC01000032.1 GCA_001059475.1_02528 CDS open 34566-34940 375_na     124_aa mazF Endoribonuclease toxin MazF
2529 JULC01000032.1 GCA_001059475.1_02529 CDS open 35549-36667 1119_na     372_aa Formate dehydrogenase%2C mitochondrial
2530 JULC01000032.1 GCA_001059475.1_02530 CDS open 37470-38465 996_na     331_aa hypothetical protein
2531 JULC01000032.1 GCA_001059475.1_02531 CDS open 38563-40239 1677_na     558_aa xynB_3 Beta-xylosidase
2532 JULC01000032.1 GCA_001059475.1_02532 CDS open 40332-41453 1122_na     373_aa ccpA_16 Catabolite control protein A
2533 JULC01000032.1 GCA_001059475.1_02533 CDS open 41802-43352 1551_na     516_aa hypothetical protein
2534 JULC01000032.1 GCA_001059475.1_02534 CDS open 43487-44407 921_na     306_aa araQ_13 L-arabinose transport system permease protein AraQ
2535 JULC01000032.1 GCA_001059475.1_02535 CDS open 44409-45362 954_na     317_aa ngcF_3 Diacetylchitobiose uptake system permease protein NgcF
2536 JULC01000032.1 GCA_001059475.1_02536 CDS open 45486-46829 1344_na     447_aa hypothetical protein
2537 JULC01000032.1 GCA_001059475.1_02537 CDS open 47185-48237 1053_na     350_aa ascG_3 HTH-type transcriptional regulator AscG
2538 JULC01000032.1 GCA_001059475.1_02538 CDS open 48327-49970 1644_na     547_aa hsrA_3 putative transport protein HsrA
2539 JULC01000033.1 GCA_001059475.1_02539 CDS open 138-1547 1410_na     469_aa hypothetical protein
2540 JULC01000033.1 GCA_001059475.1_02540 CDS open 1741-2868 1128_na     375_aa msiK Diacetylchitobiose uptake system ATP-binding protein MsiK
2541 JULC01000033.1 misc_RNA open 2871-2929 msiK
2542 JULC01000033.1 GCA_001059475.1_02542 CDS open 3168-3929 762_na     253_aa yurK putative HTH-type transcriptional regulator YurK
2543 JULC01000033.1 GCA_001059475.1_02543 CDS open 4135-5517 1383_na     460_aa ulaA Ascorbate-specific PTS system EIIC component
2544 JULC01000033.1 GCA_001059475.1_02544 CDS open 5558-5854 297_na     98_aa hypothetical protein
2545 JULC01000033.1 GCA_001059475.1_02545 CDS open 5998-6438 441_na     146_aa cmtB Mannitol-specific cryptic phosphotransferase enzyme IIA component
2546 JULC01000033.1 GCA_001059475.1_02546 CDS open 6735-7520 786_na     261_aa hypothetical protein
2547 JULC01000033.1 GCA_001059475.1_02547 CDS open 7517-8857 1341_na     446_aa hypothetical protein
2548 JULC01000033.1 GCA_001059475.1_02548 CDS open 9194-9766 573_na     190_aa hypothetical protein
2549 JULC01000033.1 GCA_001059475.1_02549 CDS open 9759-12212 2454_na     817_aa bglB_2 Thermostable beta-glucosidase B
2550 JULC01000033.1 GCA_001059475.1_02550 CDS open 12588-13238 651_na     216_aa hypothetical protein
2551 JULC01000033.1 GCA_001059475.1_02551 CDS open 13219-13902 684_na     227_aa hypothetical protein
2552 JULC01000033.1 GCA_001059475.1_02552 CDS open 14064-14912 849_na     282_aa hypothetical protein
2553 JULC01000033.1 GCA_001059475.1_02553 CDS open 15235-18360 3126_na     1041_aa hypothetical protein
2554 JULC01000033.1 GCA_001059475.1_02554 CDS open 18544-19848 1305_na     434_aa hypothetical protein
2555 JULC01000033.1 GCA_001059475.1_02555 CDS open 19859-20560 702_na     233_aa hypothetical protein
2556 JULC01000033.1 GCA_001059475.1_02556 CDS open 20809-23673 2865_na     954_aa hypothetical protein
2557 JULC01000033.1 GCA_001059475.1_02557 CDS open 24076-26271 2196_na     731_aa pknD_6 Serinethreonine-protein kinase PknD
2558 JULC01000033.1 GCA_001059475.1_02558 CDS open 26488-27465 978_na     325_aa hypothetical protein
2559 JULC01000033.1 tRNA open 27741-27815 tRNA-Thr(tgt)
2560 JULC01000033.1 GCA_001059475.1_02560 CDS open 28200-29738 1539_na     512_aa hypothetical protein
2561 JULC01000033.1 GCA_001059475.1_02561 CDS open 29798-30763 966_na     321_aa ksgA Ribosomal RNA small subunit methyltransferase A
2562 JULC01000033.1 GCA_001059475.1_02562 CDS open 30760-31737 978_na     325_aa ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
2563 JULC01000033.1 GCA_001059475.1_02563 CDS open 31769-32419 651_na     216_aa hypothetical protein
2564 JULC01000033.1 GCA_001059475.1_02564 CDS open 32479-33807 1329_na     442_aa A-adding tRNA nucleotidyltransferase
2565 JULC01000033.1 GCA_001059475.1_02565 CDS open 33981-34682 702_na     233_aa rppH RNA pyrophosphohydrolase
2566 JULC01000033.1 GCA_001059475.1_02566 CDS open 34739-37018 2280_na     759_aa hypothetical protein
2567 JULC01000033.1 GCA_001059475.1_02567 CDS open 37015-40986 3972_na     1323_aa murJ lipid II flippase MurJ