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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Lactobacillus crispatus (GCA_001434005.1)

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PROKKA Annotations for GCA_001434005.1
Genome Selected: Lactobacillus crispatus
ContigsBases CDSrRNA tmRNAtRNA
150 2057071 2017 3 1 46
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Annotation Table [page:5]    |    Number of Records Found: 2104 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 AZCW01000086.1 GCA_001434005.1_02001 CDS open 1993-3228 1236_na     411_aa hypothetical protein
2002 AZCW01000086.1 GCA_001434005.1_02002 CDS open 3251-4303 1053_na     350_aa hypothetical protein
2003 AZCW01000086.1 GCA_001434005.1_02003 CDS open 4306-4509 204_na     67_aa hypothetical protein
2004 AZCW01000086.1 GCA_001434005.1_02004 CDS open 4533-4997 465_na     154_aa hypothetical protein
2005 AZCW01000086.1 GCA_001434005.1_02005 CDS open 5250-6038 789_na     262_aa hypothetical protein
2006 AZCW01000087.1 GCA_001434005.1_02006 CDS open 148-669 522_na     173_aa hypothetical protein
2007 AZCW01000087.1 GCA_001434005.1_02007 CDS open 843-1022 180_na     59_aa putative tautomerase
2008 AZCW01000087.1 GCA_001434005.1_02008 CDS open 1070-2851 1782_na     593_aa hypothetical protein
2009 AZCW01000087.1 GCA_001434005.1_02009 CDS open 2855-3730 876_na     291_aa menH_6 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase
2010 AZCW01000087.1 GCA_001434005.1_02010 CDS open 3890-5128 1239_na     412_aa hypothetical protein
2011 AZCW01000087.1 tRNA open 5390-5465 tRNA-Arg(tct)
2012 AZCW01000088.1 GCA_001434005.1_02012 CDS open 198-1826 1629_na     542_aa hypothetical protein
2013 AZCW01000088.1 GCA_001434005.1_02013 CDS open 2021-2605 585_na     194_aa clpP ATP-dependent Clp protease proteolytic subunit
2014 AZCW01000088.1 GCA_001434005.1_02014 CDS open 2670-3605 936_na     311_aa whiA putative cell division protein WhiA
2015 AZCW01000088.1 GCA_001434005.1_02015 CDS open 3598-4641 1044_na     347_aa Putative gluconeogenesis factor
2016 AZCW01000088.1 GCA_001434005.1_02016 CDS open 4652-5389 738_na     245_aa Nucleotide-binding protein
2017 AZCW01000089.1 GCA_001434005.1_02017 CDS open 195-632 438_na     145_aa hypothetical protein
2018 AZCW01000089.1 GCA_001434005.1_02018 CDS open 1275-1607 333_na     110_aa hypothetical protein
2019 AZCW01000089.1 GCA_001434005.1_02019 CDS open 1619-1816 198_na     65_aa hypothetical protein
2020 AZCW01000089.1 GCA_001434005.1_02020 CDS open 1996-2277 282_na     93_aa hypothetical protein
2021 AZCW01000089.1 GCA_001434005.1_02021 CDS open 2423-4615 2193_na     730_aa clpE_2 ATP-dependent Clp protease ATP-binding subunit ClpE
2022 AZCW01000089.1 GCA_001434005.1_02022 CDS open 4820-5002 183_na     60_aa hypothetical protein
2023 AZCW01000009.1 GCA_001434005.1_02023 CDS open 149-910 762_na     253_aa hypothetical protein
2024 AZCW01000009.1 GCA_001434005.1_02024 CDS open 963-1298 336_na     111_aa hypothetical protein
2025 AZCW01000009.1 GCA_001434005.1_02025 CDS open 1437-3017 1581_na     526_aa btuD_16 Vitamin B12 import ATP-binding protein BtuD
2026 AZCW01000009.1 GCA_001434005.1_02026 CDS open 3179-4669 1491_na     496_aa cls Cardiolipin synthase
2027 AZCW01000009.1 GCA_001434005.1_02027 CDS open 4710-5957 1248_na     415_aa bepA Beta-barrel assembly-enhancing protease
2028 AZCW01000009.1 GCA_001434005.1_02028 CDS open 6038-6313 276_na     91_aa hup_2 DNA-binding protein HU
2029 AZCW01000009.1 GCA_001434005.1_02029 CDS open 6472-7779 1308_na     435_aa der GTPase Der
2030 AZCW01000009.1 GCA_001434005.1_02030 CDS open 7850-9058 1209_na     402_aa rps1 30S ribosomal protein S1
2031 AZCW01000009.1 GCA_001434005.1_02031 CDS open 9131-9802 672_na     223_aa cmk Cytidylate kinase
2032 AZCW01000009.1 GCA_001434005.1_02032 CDS open 9854-10315 462_na     153_aa hypothetical protein
2033 AZCW01000009.1 GCA_001434005.1_02033 CDS open 10417-11106 690_na     229_aa ribU Riboflavin transporter RibU
2034 AZCW01000009.1 misc_RNA open 11183-11295 FMN
2035 AZCW01000009.1 GCA_001434005.1_02035 CDS open 11324-12040 717_na     238_aa rluB_2 Ribosomal large subunit pseudouridine synthase B
2036 AZCW01000009.1 GCA_001434005.1_02036 CDS open 12044-12634 591_na     196_aa scpB Segregation and condensation protein B
2037 AZCW01000009.1 GCA_001434005.1_02037 CDS open 12624-13364 741_na     246_aa scpA Segregation and condensation protein A
2038 AZCW01000009.1 GCA_001434005.1_02038 CDS open 13351-13713 363_na     120_aa hypothetical protein
2039 AZCW01000009.1 GCA_001434005.1_02039 CDS open 13722-14627 906_na     301_aa xerD Tyrosine recombinase XerD
2040 AZCW01000009.1 GCA_001434005.1_02040 CDS open 14614-15507 894_na     297_aa cvfB Conserved virulence factor B
2041 AZCW01000009.1 GCA_001434005.1_02041 CDS open 15634-17403 1770_na     589_aa pyk Pyruvate kinase
2042 AZCW01000009.1 GCA_001434005.1_02042 CDS open 17437-18399 963_na     320_aa pfkA ATP-dependent 6-phosphofructokinase
2043 AZCW01000009.1 GCA_001434005.1_02043 CDS open 18567-21674 3108_na     1035_aa dnaE1 DNA polymerase III subunit alpha
2044 AZCW01000009.1 GCA_001434005.1_02044 CDS open 21790-22008 219_na     72_aa hypothetical protein
2045 AZCW01000009.1 GCA_001434005.1_02045 CDS open 22070-23626 1557_na     518_aa cpdB 2%2C3-cyclic-nucleotide 2-phosphodiesterase3-nucleotidase
2046 AZCW01000009.1 GCA_001434005.1_02046 CDS open 23686-23874 189_na     62_aa rpmF 50S ribosomal protein L32
2047 AZCW01000009.1 GCA_001434005.1_02047 CDS open 23977-24225 249_na     82_aa hypothetical protein
2048 AZCW01000009.1 GCA_001434005.1_02048 CDS open 24232-25026 795_na     264_aa putative oxidoreductase
2049 AZCW01000009.1 GCA_001434005.1_02049 CDS open 25023-25961 939_na     312_aa rnz Ribonuclease Z
2050 AZCW01000009.1 GCA_001434005.1_02050 CDS open 25979-27895 1917_na     638_aa oatA O-acetyltransferase OatA
2051 AZCW01000009.1 GCA_001434005.1_02051 CDS open 27911-29215 1305_na     434_aa obg GTPase Obg
2052 AZCW01000009.1 GCA_001434005.1_02052 CDS open 29294-31096 1803_na     600_aa uvrC UvrABC system protein C
2053 AZCW01000009.1 GCA_001434005.1_02053 CDS open 31236-31850 615_na     204_aa hypothetical protein
2054 AZCW01000009.1 GCA_001434005.1_02054 CDS open 31948-33333 1386_na     461_aa yhdG_2 putative amino acid permease YhdG
2055 AZCW01000009.1 GCA_001434005.1_02055 CDS open 33400-34365 966_na     321_aa Hydroxypyruvate reductase
2056 AZCW01000009.1 GCA_001434005.1_02056 CDS open 34432-35244 813_na     270_aa yidA_4 Sugar phosphatase YidA
2057 AZCW01000009.1 GCA_001434005.1_02057 CDS open 35293-36129 837_na     278_aa putative oxidoreductaseMSMEI_2347
2058 AZCW01000009.1 GCA_001434005.1_02058 CDS open 36629-37819 1191_na     396_aa coaBC Coenzyme A biosynthesis bifunctional protein CoaBC
2059 AZCW01000009.1 GCA_001434005.1_02059 CDS open 38297-39481 1185_na     394_aa dapX_3 putative N-acetyl-LL-diaminopimelate aminotransferase
2060 AZCW01000009.1 GCA_001434005.1_02060 CDS open 39547-41400 1854_na     617_aa aspS Aspartate--tRNA ligase
2061 AZCW01000009.1 GCA_001434005.1_02061 CDS open 41406-42692 1287_na     428_aa hisS Histidine--tRNA ligase
2062 AZCW01000009.1 GCA_001434005.1_02062 CDS open 42988-43425 438_na     145_aa dtd D-aminoacyl-tRNA deacylase
2063 AZCW01000009.1 GCA_001434005.1_02063 CDS open 43425-45665 2241_na     746_aa relA GTP pyrophosphokinase
2064 AZCW01000009.1 GCA_001434005.1_02064 CDS open 45680-46042 363_na     120_aa hypothetical protein
2065 AZCW01000009.1 GCA_001434005.1_02065 CDS open 46098-47042 945_na     314_aa prmA Ribosomal protein L11 methyltransferase
2066 AZCW01000009.1 GCA_001434005.1_02066 CDS open 47103-47612 510_na     169_aa hypothetical protein
2067 AZCW01000009.1 GCA_001434005.1_02067 CDS open 48008-49354 1347_na     448_aa hypothetical protein
2068 AZCW01000090.1 GCA_001434005.1_02068 CDS open 152-1852 1701_na     566_aa hypothetical protein
2069 AZCW01000090.1 GCA_001434005.1_02069 CDS open 2229-2549 321_na     106_aa hypothetical protein
2070 AZCW01000090.1 tRNA open 2649-2735 tRNA-Leu(cag)
2071 AZCW01000090.1 GCA_001434005.1_02071 CDS open 2823-4124 1302_na     433_aa dacA_2 D-alanyl-D-alanine carboxypeptidase DacA
2072 AZCW01000090.1 GCA_001434005.1_02072 CDS open 4127-4975 849_na     282_aa nnrD ADP-dependent (S)-NAD(P)H-hydrate dehydratase
2073 AZCW01000091.1 GCA_001434005.1_02073 CDS open 136-1773 1638_na     545_aa prmC_2 Release factor glutamine methyltransferase
2074 AZCW01000091.1 GCA_001434005.1_02074 CDS open 1783-4881 3099_na     1032_aa hsdR Type-1 restriction enzyme R protein
2075 AZCW01000092.1 GCA_001434005.1_02075 CDS open 458-2524 2067_na     688_aa bcgIA Restriction enzyme BgcI subunit alpha
2076 AZCW01000092.1 GCA_001434005.1_02076 CDS open 2517-3650 1134_na     377_aa bcgIB Restriction enzyme BgcI subunit beta
2077 AZCW01000092.1 GCA_001434005.1_02077 CDS open 3932-4240 309_na     102_aa hypothetical protein
2078 AZCW01000092.1 GCA_001434005.1_02078 CDS open 4240-4527 288_na     95_aa hypothetical protein
2079 AZCW01000094.1 GCA_001434005.1_02079 CDS open 114-1103 990_na     329_aa mmuM Homocysteine S-methyltransferase
2080 AZCW01000094.1 GCA_001434005.1_02080 CDS open 1265-3469 2205_na     734_aa uvrA_3 UvrABC system protein A
2081 AZCW01000094.1 GCA_001434005.1_02081 CDS open 3784-4236 453_na     150_aa hypothetical protein
2082 AZCW01000095.1 GCA_001434005.1_02082 CDS open 29-379 351_na     116_aa hypothetical protein
2083 AZCW01000095.1 GCA_001434005.1_02083 CDS open 566-1897 1332_na     443_aa pyrP Uracil permease
2084 AZCW01000095.1 GCA_001434005.1_02084 CDS open 1909-2436 528_na     175_aa pyrR_2 Bifunctional protein pyrR
2085 AZCW01000095.1 misc_RNA open 2461-2580 PyrR
2086 AZCW01000095.1 GCA_001434005.1_02086 CDS open 2721-4190 1470_na     489_aa bmr3_3 Multidrug resistance protein 3
2087 AZCW01000096.1 GCA_001434005.1_02087 CDS open 222-743 522_na     173_aa hypothetical protein
2088 AZCW01000096.1 GCA_001434005.1_02088 CDS open 1618-3126 1509_na     502_aa hypothetical protein
2089 AZCW01000096.1 GCA_001434005.1_02089 CDS open 3123-3347 225_na     74_aa hypothetical protein
2090 AZCW01000096.1 GCA_001434005.1_02090 CDS open 3349-3768 420_na     139_aa hypothetical protein
2091 AZCW01000097.1 GCA_001434005.1_02091 CDS open 169-1560 1392_na     463_aa ISNCY family transposase ISSeq2
2092 AZCW01000097.1 GCA_001434005.1_02092 CDS open 1615-2469 855_na     284_aa clcA_2 H(+)Cl(-) exchange transporter ClcA
2093 AZCW01000097.1 GCA_001434005.1_02093 CDS open 2476-2916 441_na     146_aa clcA_3 H(+)Cl(-) exchange transporter ClcA
2094 AZCW01000097.1 GCA_001434005.1_02094 CDS open 3052-3468 417_na     138_aa hypothetical protein
2095 AZCW01000097.1 GCA_001434005.1_02095 CDS open 3456-3671 216_na     71_aa hypothetical protein
2096 AZCW01000098.1 GCA_001434005.1_02096 CDS open 57-596 540_na     179_aa hypothetical protein
2097 AZCW01000098.1 GCA_001434005.1_02097 CDS open 574-1890 1317_na     438_aa hypothetical protein
2098 AZCW01000098.1 GCA_001434005.1_02098 CDS open 1871-2815 945_na     314_aa hypothetical protein
2099 AZCW01000098.1 GCA_001434005.1_02099 CDS open 2808-3467 660_na     219_aa hypothetical protein
2100 AZCW01000099.1 GCA_001434005.1_02100 CDS open 166-1440 1275_na     424_aa hypothetical protein
2101 AZCW01000099.1 GCA_001434005.1_02101 CDS open 1715-2356 642_na     213_aa hypothetical protein
2102 AZCW01000099.1 misc_RNA open 2419-2499 L21_leader
2103 AZCW01000099.1 GCA_001434005.1_02103 CDS open 2515-2826 312_na     103_aa rplU 50S ribosomal protein L21
2104 AZCW01000099.1 GCA_001434005.1_02104 CDS open 2845-3135 291_na     96_aa rpmA 50S ribosomal protein L27