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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Prevotella bivia (GCA_001546565.2)

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PROKKA Annotations for GCA_001546565.2
Genome Selected: Prevotella bivia
ContigsBases CDSrRNA tmRNAtRNA
127 2459295 2083 2 1 44
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:5]    |    Number of Records Found: 2140 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 KQ971220.1 GCA_001546565.2_02001 CDS open 1590-3488 1899_na     632_aa korA_1 2-oxoglutarate oxidoreductase subunit KorA
2002 KQ971220.1 GCA_001546565.2_02002 CDS open 3505-4512 1008_na     335_aa korB_1 2-oxoglutarate oxidoreductase subunit KorB
2003 KQ971220.1 GCA_001546565.2_02003 CDS open 4916-5242 327_na     108_aa hypothetical protein
2004 KQ971220.1 GCA_001546565.2_02004 CDS open 5233-6879 1647_na     548_aa hypothetical protein
2005 KQ971220.1 GCA_001546565.2_02005 CDS open 7406-7807 402_na     133_aa hypothetical protein
2006 KQ971220.1 GCA_001546565.2_02006 CDS open 8351-10012 1662_na     553_aa udk_2 Uridine kinase
2007 KQ971220.1 GCA_001546565.2_02007 CDS open 10256-11950 1695_na     564_aa hypothetical protein
2008 KQ971220.1 GCA_001546565.2_02008 CDS open 12029-12904 876_na     291_aa hypothetical protein
2009 KQ971220.1 GCA_001546565.2_02009 CDS open 13015-14361 1347_na     448_aa epsN Putative pyridoxal phosphate-dependent aminotransferase EpsN
2010 KQ971221.1 GCA_001546565.2_02010 CDS open 510-605 96_na     31_aa hypothetical protein
2011 KQ971221.1 GCA_001546565.2_02011 CDS open 585-1025 441_na     146_aa hypothetical protein
2012 KQ971221.1 GCA_001546565.2_02012 CDS open 1007-2677 1671_na     556_aa glgE Alpha-1%2C4-glucan:maltose-1-phosphate maltosyltransferase
2013 KQ971221.1 GCA_001546565.2_02013 CDS open 2745-3629 885_na     294_aa fabD Malonyl CoA-acyl carrier protein transacylase
2014 KQ971221.1 GCA_001546565.2_02014 CDS open 3997-5358 1362_na     453_aa dapE_2 Succinyl-diaminopimelate desuccinylase
2015 KQ971221.1 GCA_001546565.2_02015 CDS open 5524-5934 411_na     136_aa hypothetical protein
2016 KQ971221.1 GCA_001546565.2_02016 CDS open 6149-6508 360_na     119_aa hypothetical protein
2017 KQ971221.1 GCA_001546565.2_02017 CDS open 6560-7048 489_na     162_aa Flavodoxin 1
2018 KQ971221.1 GCA_001546565.2_02018 CDS open 7316-7921 606_na     201_aa slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD
2019 KQ971221.1 GCA_001546565.2_02019 CDS open 7935-9020 1086_na     361_aa aroC Chorismate synthase
2020 KQ971221.1 GCA_001546565.2_02020 CDS open 9076-9222 147_na     48_aa elaA Protein ElaA
2021 KQ971221.1 GCA_001546565.2_02021 CDS open 9236-9907 672_na     223_aa Pyridoxal phosphate homeostasis protein
2022 KQ971221.1 GCA_001546565.2_02022 CDS open 9944-10423 480_na     159_aa hypothetical protein
2023 KQ971221.1 GCA_001546565.2_02023 CDS open 10531-10638 108_na     35_aa hypothetical protein
2024 KQ971221.1 GCA_001546565.2_02024 CDS open 10643-11845 1203_na     400_aa aspC Aspartate aminotransferase
2025 KQ971221.1 GCA_001546565.2_02025 CDS open 11918-13165 1248_na     415_aa lolE Lipoprotein-releasing system transmembrane protein LolE
2026 KQ971221.1 GCA_001546565.2_02026 CDS open 13393-15054 1662_na     553_aa lcfB Long-chain-fatty-acid--CoA ligase
2027 KQ971221.1 GCA_001546565.2_02027 CDS open 15182-15781 600_na     199_aa hypothetical protein
2028 KQ971221.1 GCA_001546565.2_02028 CDS open 15827-17608 1782_na     593_aa lepA Elongation factor 4
2029 KQ971221.1 GCA_001546565.2_02029 CDS open 17723-18115 393_na     130_aa hypothetical protein
2030 KQ971221.1 GCA_001546565.2_02030 CDS open 18498-20141 1644_na     547_aa hypothetical protein
2031 KQ971221.1 GCA_001546565.2_02031 CDS open 20233-21225 993_na     330_aa hypothetical protein
2032 KQ971221.1 GCA_001546565.2_02032 CDS open 21389-22258 870_na     289_aa hypothetical protein
2033 KQ971221.1 GCA_001546565.2_02033 CDS open 22182-23069 888_na     295_aa hypothetical protein
2034 KQ971221.1 GCA_001546565.2_02034 CDS open 23236-24879 1644_na     547_aa pfp Pyrophosphate--fructose 6-phosphate 1-phosphotransferase
2035 KQ971221.1 GCA_001546565.2_02035 CDS open 25080-25352 273_na     90_aa hypothetical protein
2036 KQ971221.1 GCA_001546565.2_02036 CDS open 25371-25916 546_na     181_aa hypothetical protein
2037 KQ971221.1 GCA_001546565.2_02037 CDS open 25918-28500 2583_na     860_aa hypothetical protein
2038 KQ971221.1 GCA_001546565.2_02038 CDS open 28566-28904 339_na     112_aa hypothetical protein
2039 KQ971221.1 GCA_001546565.2_02039 CDS open 29398-30540 1143_na     380_aa cydB Cytochrome bd-I ubiquinol oxidase subunit 2
2040 KQ971221.1 GCA_001546565.2_02040 CDS open 30537-32072 1536_na     511_aa cydA Cytochrome bd ubiquinol oxidase subunit 1
2041 KQ971221.1 GCA_001546565.2_02041 CDS open 32160-32378 219_na     72_aa hypothetical protein
2042 KQ971221.1 GCA_001546565.2_02042 CDS open 32591-34063 1473_na     490_aa hypothetical protein
2043 KQ971221.1 GCA_001546565.2_02043 CDS open 34127-35110 984_na     327_aa hypothetical protein
2044 KQ971221.1 GCA_001546565.2_02044 CDS open 35118-36290 1173_na     390_aa hypothetical protein
2045 KQ971221.1 GCA_001546565.2_02045 CDS open 36304-37470 1167_na     388_aa hypothetical protein
2046 KQ971221.1 GCA_001546565.2_02046 CDS open 37621-39162 1542_na     513_aa rny Ribonuclease Y
2047 KQ971221.1 GCA_001546565.2_02047 CDS open 39200-39490 291_na     96_aa hypothetical protein
2048 KQ971221.1 GCA_001546565.2_02048 CDS open 39509-39802 294_na     97_aa hypothetical protein
2049 KQ971221.1 GCA_001546565.2_02049 CDS open 39868-40500 633_na     210_aa hypothetical protein
2050 KQ971221.1 GCA_001546565.2_02050 CDS open 40792-41670 879_na     292_aa rffH Glucose-1-phosphate thymidylyltransferase 2
2051 KQ971221.1 GCA_001546565.2_02051 CDS open 41705-44203 2499_na     832_aa hypothetical protein
2052 KQ971221.1 GCA_001546565.2_02052 CDS open 44210-44635 426_na     141_aa hypothetical protein
2053 KQ971221.1 GCA_001546565.2_02053 CDS open 45183-46295 1113_na     370_aa Outer membrane protein 41
2054 KQ971221.1 GCA_001546565.2_02054 CDS open 46592-47134 543_na     180_aa hypothetical protein
2055 KQ971221.1 GCA_001546565.2_02055 CDS open 47220-47987 768_na     255_aa korB_2 2-oxoglutarate oxidoreductase subunit KorB
2056 KQ971221.1 GCA_001546565.2_02056 CDS open 47996-49084 1089_na     362_aa korA_2 2-oxoglutarate oxidoreductase subunit KorA
2057 KQ971221.1 GCA_001546565.2_02057 CDS open 49087-49311 225_na     74_aa rsxB Ion-translocating oxidoreductase complex subunit B
2058 KQ971221.1 GCA_001546565.2_02058 CDS open 49333-49512 180_na     59_aa hypothetical protein
2059 KQ971221.1 GCA_001546565.2_02059 CDS open 49534-50415 882_na     293_aa folD Bifunctional protein FolD protein
2060 KQ971221.1 GCA_001546565.2_02060 CDS open 50439-51800 1362_na     453_aa ffh Signal recognition particle protein
2061 KQ971221.1 GCA_001546565.2_02061 CDS open 52160-52972 813_na     270_aa hypothetical protein
2062 KQ971221.1 GCA_001546565.2_02062 CDS open 52965-53945 981_na     326_aa hypothetical protein
2063 KQ971221.1 GCA_001546565.2_02063 CDS open 53977-55044 1068_na     355_aa kdsA_2 2-dehydro-3-deoxyphosphooctonate aldolase
2064 KQ971221.1 GCA_001546565.2_02064 CDS open 55610-56710 1101_na     366_aa xerC_18 Tyrosine recombinase XerC
2065 KQ971221.1 GCA_001546565.2_02065 CDS open 56707-57081 375_na     124_aa hypothetical protein
2066 KQ971221.1 GCA_001546565.2_02066 CDS open 57046-57339 294_na     97_aa hypothetical protein
2067 KQ971221.1 GCA_001546565.2_02067 CDS open 58252-58869 618_na     205_aa pflA Pyruvate formate-lyase 1-activating enzyme
2068 KQ971221.1 GCA_001546565.2_02068 CDS open 58871-59953 1083_na     360_aa hypothetical protein
2069 KQ971221.1 GCA_001546565.2_02069 CDS open 61170-61970 801_na     266_aa hypothetical protein
2070 KQ971221.1 GCA_001546565.2_02070 CDS open 62086-62550 465_na     154_aa putative enoyl-CoA hydratase 1
2071 KQ971221.1 GCA_001546565.2_02071 CDS open 62953-63465 513_na     170_aa hypothetical protein
2072 KQ971221.1 tRNA open 63566-63637 tRNA-Gly(ccc)
2073 KQ971221.1 tRNA open 63643-63716 tRNA-Thr(cgt)
2074 KQ971221.1 GCA_001546565.2_02074 CDS open 63851-66025 2175_na     724_aa hypothetical protein
2075 KQ971221.1 GCA_001546565.2_02075 CDS open 66068-66982 915_na     304_aa hypothetical protein
2076 KQ971221.1 GCA_001546565.2_02076 CDS open 67045-68442 1398_na     465_aa radA DNA repair protein RadA
2077 KQ971221.1 GCA_001546565.2_02077 CDS open 68603-71077 2475_na     824_aa feoB Fe(2+) transporter FeoB
2078 KQ971221.1 GCA_001546565.2_02078 CDS open 71442-71927 486_na     161_aa ftnA Bacterial non-heme ferritin
2079 KQ971221.1 GCA_001546565.2_02079 CDS open 72098-72412 315_na     104_aa hypothetical protein
2080 KQ971221.1 GCA_001546565.2_02080 CDS open 72527-74581 2055_na     684_aa htpG Chaperone protein HtpG
2081 KQ971221.1 GCA_001546565.2_02081 CDS open 74780-76231 1452_na     483_aa pepD_2 Cytosol non-specific dipeptidase
2082 KQ971221.1 GCA_001546565.2_02082 CDS open 76240-76503 264_na     87_aa hypothetical protein
2083 KQ971221.1 GCA_001546565.2_02083 CDS open 76552-77154 603_na     200_aa hypothetical protein
2084 KQ971221.1 tRNA open 77875-77947 tRNA-Glu(ctc)
2085 KQ971221.1 tRNA open 77976-78063 tRNA-Ser(gct)
2086 KQ971221.1 GCA_001546565.2_02086 CDS open 78621-79655 1035_na     344_aa rlmN Dual-specificity RNA methyltransferase RlmN
2087 KQ971221.1 GCA_001546565.2_02087 CDS open 79648-80565 918_na     305_aa hypothetical protein
2088 KQ971221.1 GCA_001546565.2_02088 CDS open 80616-81737 1122_na     373_aa pdxA 4-hydroxythreonine-4-phosphate dehydrogenase
2089 KQ971221.1 GCA_001546565.2_02089 CDS open 81764-82780 1017_na     338_aa hypothetical protein
2090 KQ971221.1 GCA_001546565.2_02090 CDS open 82834-83760 927_na     308_aa hypothetical protein
2091 KQ971221.1 GCA_001546565.2_02091 CDS open 83876-85810 1935_na     644_aa pglF UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase
2092 KQ971221.1 GCA_001546565.2_02092 CDS open 85969-87279 1311_na     436_aa hypothetical protein
2093 KQ971221.1 GCA_001546565.2_02093 CDS open 87425-88348 924_na     307_aa pta_2 Phosphate acetyltransferase
2094 KQ971221.1 GCA_001546565.2_02094 CDS open 88338-89402 1065_na     354_aa buk2 Butyrate kinase 2
2095 KQ971221.1 GCA_001546565.2_02095 CDS open 89438-90571 1134_na     377_aa sucC Succinate--CoA ligase [ADP-forming] subunit beta
2096 KQ971221.1 GCA_001546565.2_02096 CDS open 90591-91463 873_na     290_aa sucD Succinate--CoA ligase [ADP-forming] subunit alpha
2097 KQ971221.1 GCA_001546565.2_02097 CDS open 91722-93755 2034_na     677_aa pepO Neutral endopeptidase
2098 KQ971221.1 GCA_001546565.2_02098 CDS open 93852-95837 1986_na     661_aa yheS putative ABC transporter ATP-binding protein YheS
2099 KQ971221.1 GCA_001546565.2_02099 CDS open 95985-98132 2148_na     715_aa yhgF Protein YhgF
2100 KQ971221.1 GCA_001546565.2_02100 CDS open 98154-98828 675_na     224_aa hypothetical protein
2101 KQ971221.1 GCA_001546565.2_02101 CDS open 99085-100887 1803_na     600_aa typA GTP-binding protein TypABipA
2102 KQ971221.1 GCA_001546565.2_02102 CDS open 101096-101371 276_na     91_aa rpsO 30S ribosomal protein S15
2103 KQ971222.1 GCA_001546565.2_02103 CDS open 201-1217 1017_na     338_aa ilvE Branched-chain-amino-acid aminotransferase
2104 KQ971222.1 GCA_001546565.2_02104 CDS open 1140-1289 150_na     49_aa hypothetical protein
2105 KQ971223.1 GCA_001546565.2_02105 CDS open 206-1306 1101_na     366_aa mshA_4 D-inositol-3-phosphate glycosyltransferase
2106 KQ971223.1 GCA_001546565.2_02106 CDS open 1311-2360 1050_na     349_aa hypothetical protein
2107 KQ971223.1 GCA_001546565.2_02107 CDS open 2363-3289 927_na     308_aa arnC_1 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
2108 KQ971223.1 GCA_001546565.2_02108 CDS open 3289-4437 1149_na     382_aa hypothetical protein
2109 KQ971223.1 GCA_001546565.2_02109 CDS open 4443-5603 1161_na     386_aa hypothetical protein
2110 KQ971223.1 GCA_001546565.2_02110 CDS open 5603-6166 564_na     187_aa hypothetical protein
2111 KQ971223.1 GCA_001546565.2_02111 CDS open 6236-7999 1764_na     587_aa hypothetical protein
2112 KQ971223.1 GCA_001546565.2_02112 CDS open 8085-8936 852_na     283_aa hypothetical protein
2113 KQ971223.1 GCA_001546565.2_02113 CDS open 8929-9948 1020_na     339_aa hypothetical protein
2114 KQ971223.1 GCA_001546565.2_02114 CDS open 9941-11761 1821_na     606_aa hisC_2 Histidinol-phosphate aminotransferase
2115 KQ971223.1 GCA_001546565.2_02115 CDS open 11948-13027 1080_na     359_aa arnC_2 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
2116 KQ971223.1 GCA_001546565.2_02116 CDS open 13024-14454 1431_na     476_aa rfbX Putative O-antigen transporter
2117 KQ971223.1 GCA_001546565.2_02117 CDS open 14491-15465 975_na     324_aa hypothetical protein
2118 KQ971224.1 GCA_001546565.2_02118 CDS open 56-598 543_na     180_aa hypothetical protein
2119 KQ971224.1 GCA_001546565.2_02119 CDS open 729-1715 987_na     328_aa mdh Malate dehydrogenase
2120 KQ971225.1 GCA_001546565.2_02120 CDS open 467-1255 789_na     262_aa btuD Vitamin B12 import ATP-binding protein BtuD
2121 KQ971225.1 GCA_001546565.2_02121 CDS open 1286-2605 1320_na     439_aa lysC Lysine-sensitive aspartokinase 3
2122 KQ971225.1 GCA_001546565.2_02122 CDS open 2645-3796 1152_na     383_aa lysA_2 Diaminopimelate decarboxylase
2123 KQ971225.1 GCA_001546565.2_02123 CDS open 3825-5021 1197_na     398_aa hypothetical protein
2124 KQ971225.1 GCA_001546565.2_02124 CDS open 5021-6175 1155_na     384_aa hypothetical protein
2125 KQ971225.1 GCA_001546565.2_02125 CDS open 6206-8221 2016_na     671_aa fbp Fructose-1%2C6-bisphosphatase class 3
2126 KQ971225.1 GCA_001546565.2_02126 CDS open 8308-10014 1707_na     568_aa caiA Crotonobetainyl-CoA reductase
2127 KQ971225.1 GCA_001546565.2_02127 CDS open 10026-11048 1023_na     340_aa carE Caffeyl-CoA reductase-Etf complex subunit CarE
2128 KQ971225.1 GCA_001546565.2_02128 CDS open 11175-12044 870_na     289_aa carD Caffeyl-CoA reductase-Etf complex subunit CarD
2129 KQ971225.1 GCA_001546565.2_02129 CDS open 12336-13043 708_na     235_aa Putative peptidyl-prolyl cis-trans isomerase
2130 KQ971225.1 GCA_001546565.2_02130 CDS open 13087-13497 411_na     136_aa tsaE tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
2131 KQ971225.1 GCA_001546565.2_02131 CDS open 13539-13937 399_na     132_aa hypothetical protein
2132 KQ971225.1 GCA_001546565.2_02132 CDS open 13939-15195 1257_na     418_aa aroA 3-phosphoshikimate 1-carboxyvinyltransferase
2133 KQ971225.1 tRNA open 15444-15519 tRNA-Pro(ggg)
2134 KQ971225.1 GCA_001546565.2_02134 CDS open 15627-15791 165_na     54_aa hypothetical protein
2135 KQ971226.1 GCA_001546565.2_02135 CDS open 120-704 585_na     194_aa apxIB Toxin RTX-I translocation ATP-binding protein
2136 KQ971227.1 GCA_001546565.2_02136 CDS open 458-1102 645_na     214_aa lnrK Transcriptional regulatory protein LnrK
2137 KQ971227.1 GCA_001546565.2_02137 CDS open 1158-1334 177_na     58_aa hypothetical protein
2138 KQ971227.1 GCA_001546565.2_02138 CDS open 1762-6219 4458_na     1485_aa cas9 CRISPR-associated endonuclease Cas9
2139 KQ971227.1 GCA_001546565.2_02139 CDS open 6229-7161 933_na     310_aa cas1 CRISPR-associated endonuclease Cas1
2140 KQ971227.1 GCA_001546565.2_02140 CDS open 7163-7504 342_na     113_aa cas2 CRISPR-associated endoribonuclease Cas2