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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Actinomyces radicidentis (GCA_001553565.1)

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PROKKA Annotations for GCA_001553565.1
Genome Selected: Actinomyces radicidentis
ContigsBases CDSrRNA tmRNAtRNA
1 3,051,613 2544 9 1 55
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Annotation Table [page:6]    |    Number of Records Found: 2630 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 CP014228.1 GCA_001553565.1_02501 CDS open 2895308-2895634 327_na     108_aa 1%2C3-beta-galactosyl-N-acetylhexosamine phosphorylase
2502 CP014228.1 GCA_001553565.1_02502 CDS open 2895890-2897083 1194_na     397_aa hypothetical protein
2503 CP014228.1 GCA_001553565.1_02503 CDS open 2897080-2898288 1209_na     402_aa pimB_1 GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase
2504 CP014228.1 GCA_001553565.1_02504 CDS open 2898291-2899448 1158_na     385_aa glgM_2 Alpha-maltose-1-phosphate synthase
2505 CP014228.1 GCA_001553565.1_02505 CDS open 2899438-2901303 1866_na     621_aa Putative multidrug export ATP-bindingpermease protein
2506 CP014228.1 GCA_001553565.1_02506 CDS open 2901300-2902442 1143_na     380_aa hypothetical protein
2507 CP014228.1 GCA_001553565.1_02507 CDS open 2902439-2903530 1092_na     363_aa hypothetical protein
2508 CP014228.1 GCA_001553565.1_02508 CDS open 2903564-2904838 1275_na     424_aa rkpK UDP-glucose 6-dehydrogenase
2509 CP014228.1 GCA_001553565.1_02509 CDS open 2904871-2906409 1539_na     512_aa sasA_6 Adaptive-response sensory-kinase SasA
2510 CP014228.1 GCA_001553565.1_02510 CDS open 2906406-2907071 666_na     221_aa copR Transcriptional activator protein CopR
2511 CP014228.1 GCA_001553565.1_02511 CDS open 2907154-2907507 354_na     117_aa hypothetical protein
2512 CP014228.1 GCA_001553565.1_02512 CDS open 2907526-2908821 1296_na     431_aa proA Gamma-glutamyl phosphate reductase
2513 CP014228.1 GCA_001553565.1_02513 CDS open 2909026-2910186 1161_na     386_aa hypothetical protein
2514 CP014228.1 GCA_001553565.1_02514 CDS open 2910183-2910794 612_na     203_aa hypothetical protein
2515 CP014228.1 GCA_001553565.1_02515 CDS open 2910807-2911940 1134_na     377_aa proB Glutamate 5-kinase
2516 CP014228.1 GCA_001553565.1_02516 CDS open 2911937-2913511 1575_na     524_aa obg GTPase Obg
2517 CP014228.1 GCA_001553565.1_02517 CDS open 2913655-2913912 258_na     85_aa rpmA 50S ribosomal protein L27
2518 CP014228.1 GCA_001553565.1_02518 CDS open 2913963-2914271 309_na     102_aa rplU 50S ribosomal protein L21
2519 CP014228.1 GCA_001553565.1_02519 CDS open 2914490-2917672 3183_na     1060_aa rne Ribonuclease E
2520 CP014228.1 GCA_001553565.1_02520 CDS open 2918184-2919692 1509_na     502_aa cydA Cytochrome bd-I ubiquinol oxidase subunit 1
2521 CP014228.1 GCA_001553565.1_02521 CDS open 2919713-2920846 1134_na     377_aa cydB Cytochrome bd-I ubiquinol oxidase subunit 2
2522 CP014228.1 GCA_001553565.1_02522 CDS open 2921120-2922913 1794_na     597_aa cydD ATP-bindingpermease protein CydD
2523 CP014228.1 GCA_001553565.1_02523 CDS open 2922910-2924718 1809_na     602_aa putative ABC transporter ATP-bindingpermease protein
2524 CP014228.1 GCA_001553565.1_02524 CDS open 2924722-2926710 1989_na     662_aa hypothetical protein
2525 CP014228.1 GCA_001553565.1_02525 CDS open 2926816-2927469 654_na     217_aa devR DNA-binding transcriptional activator DevRDosR
2526 CP014228.1 GCA_001553565.1_02526 CDS open 2927623-2928690 1068_na     355_aa mutM Formamidopyrimidine-DNA glycosylase
2527 CP014228.1 GCA_001553565.1_02527 CDS open 2928698-2929492 795_na     264_aa rnc Ribonuclease 3
2528 CP014228.1 GCA_001553565.1_02528 CDS open 2929492-2930088 597_na     198_aa putative protein
2529 CP014228.1 GCA_001553565.1_02529 CDS open 2930239-2930853 615_na     204_aa hypothetical protein
2530 CP014228.1 GCA_001553565.1_02530 CDS open 2930900-2931382 483_na     160_aa coaD Phosphopantetheine adenylyltransferase
2531 CP014228.1 GCA_001553565.1_02531 CDS open 2931504-2932508 1005_na     334_aa rbsR Ribose operon repressor
2532 CP014228.1 GCA_001553565.1_02532 CDS open 2932652-2934037 1386_na     461_aa fucP_2 L-fucose-proton symporter
2533 CP014228.1 GCA_001553565.1_02533 CDS open 2934037-2934465 429_na     142_aa fucU L-fucose mutarotase
2534 CP014228.1 GCA_001553565.1_02534 CDS open 2934505-2935983 1479_na     492_aa rhaB_2 L-Rhamnulokinase
2535 CP014228.1 GCA_001553565.1_02535 CDS open 2935994-2937772 1779_na     592_aa fucI L-fucose isomerase
2536 CP014228.1 GCA_001553565.1_02536 CDS open 2937976-2938647 672_na     223_aa drdA_2 5-deoxy-D-ribulose 1-phosphate aldolase
2537 CP014228.1 GCA_001553565.1_02537 CDS open 2938671-2941994 3324_na     1107_aa lacZ Beta-galactosidase
2538 CP014228.1 GCA_001553565.1_02538 CDS open 2942040-2942666 627_na     208_aa rsmD Ribosomal RNA small subunit methyltransferase D
2539 CP014228.1 GCA_001553565.1_02539 CDS open 2942688-2945036 2349_na     782_aa recG ATP-dependent DNA helicase RecG
2540 CP014228.1 GCA_001553565.1_02540 CDS open 2945055-2946953 1899_na     632_aa putative protein
2541 CP014228.1 GCA_001553565.1_02541 CDS open 2947284-2947475 192_na     63_aa rpmB_2 50S ribosomal protein L28
2542 CP014228.1 GCA_001553565.1_02542 CDS open 2947644-2948402 759_na     252_aa nlhH Carboxylesterase NlhH
2543 CP014228.1 GCA_001553565.1_02543 CDS open 2948624-2949400 777_na     258_aa hypothetical protein
2544 CP014228.1 GCA_001553565.1_02544 CDS open 2949449-2950681 1233_na     410_aa naiP_2 Putative niacinnicotinamide transporter NaiP
2545 CP014228.1 GCA_001553565.1_02545 CDS open 2950867-2951919 1053_na     350_aa ccpA_2 Catabolite control protein A
2546 CP014228.1 GCA_001553565.1_02546 CDS open 2951946-2953082 1137_na     378_aa thiL Thiamine-monophosphate kinase
2547 CP014228.1 GCA_001553565.1_02547 CDS open 2953117-2954271 1155_na     384_aa ddlA D-alanine--D-alanine ligase A
2548 CP014228.1 GCA_001553565.1_02548 CDS open 2954422-2955180 759_na     252_aa hypothetical protein
2549 CP014228.1 GCA_001553565.1_02549 CDS open 2955394-2956500 1107_na     368_aa IS110 family transposase ISSso6
2550 CP014228.1 GCA_001553565.1_02550 CDS open 2956796-2957872 1077_na     358_aa gpsA Glycerol-3-phosphate dehydrogenase [NAD(P)+]
2551 CP014228.1 GCA_001553565.1_02551 CDS open 2957869-2958714 846_na     281_aa hypothetical protein
2552 CP014228.1 GCA_001553565.1_02552 CDS open 2958832-2960154 1323_na     440_aa murA1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
2553 CP014228.1 GCA_001553565.1_02553 CDS open 2960417-2961088 672_na     223_aa leuD 3-isopropylmalate dehydratase small subunit
2554 CP014228.1 GCA_001553565.1_02554 CDS open 2961111-2962532 1422_na     473_aa leuC 3-isopropylmalate dehydratase large subunit
2555 CP014228.1 GCA_001553565.1_02555 CDS open 2962829-2963569 741_na     246_aa rhmR putative HTH-type transcriptional regulator RhmR
2556 CP014228.1 GCA_001553565.1_02556 CDS open 2963825-2965171 1347_na     448_aa cypC Fatty-acid peroxygenase
2557 CP014228.1 GCA_001553565.1_02557 CDS open 2965194-2966333 1140_na     379_aa pimB_2 GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase
2558 CP014228.1 GCA_001553565.1_02558 CDS open 2966471-2966941 471_na     156_aa nrdR Transcriptional repressor NrdR
2559 CP014228.1 GCA_001553565.1_02559 CDS open 2967027-2967722 696_na     231_aa hypothetical protein
2560 CP014228.1 GCA_001553565.1_02560 CDS open 2967948-2968703 756_na     251_aa lexA LexA repressor
2561 CP014228.1 GCA_001553565.1_02561 CDS open 2968847-2969851 1005_na     334_aa ldh2 L-lactate dehydrogenase 2
2562 CP014228.1 GCA_001553565.1_02562 CDS open 2970278-2972443 2166_na     721_aa nagZ_2 Beta-hexosaminidase
2563 CP014228.1 GCA_001553565.1_02563 CDS open 2972576-2974609 2034_na     677_aa dinG_2 putative ATP-dependent helicase DinG
2564 CP014228.1 GCA_001553565.1_02564 CDS open 2974635-2976359 1725_na     574_aa hflX_3 GTPase HflX
2565 CP014228.1 GCA_001553565.1_02565 CDS open 2976563-2978017 1455_na     484_aa hypothetical protein
2566 CP014228.1 GCA_001553565.1_02566 CDS open 2978043-2978651 609_na     202_aa rsmC Ribosomal RNA small subunit methyltransferase C
2567 CP014228.1 GCA_001553565.1_02567 CDS open 2978676-2980178 1503_na     500_aa stp Multidrug resistance protein Stp
2568 CP014228.1 GCA_001553565.1_02568 CDS open 2980333-2981736 1404_na     467_aa brnQ Branched-chain amino acid transport system 2 carrier protein
2569 CP014228.1 GCA_001553565.1_02569 CDS open 2981765-2982724 960_na     319_aa dapF Diaminopimelate epimerase
2570 CP014228.1 GCA_001553565.1_02570 CDS open 2982735-2983874 1140_na     379_aa miaA tRNA dimethylallyltransferase
2571 CP014228.1 GCA_001553565.1_02571 CDS open 2983871-2984596 726_na     241_aa hypothetical protein
2572 CP014228.1 GCA_001553565.1_02572 CDS open 2984596-2985072 477_na     158_aa hypothetical protein
2573 CP014228.1 GCA_001553565.1_02573 CDS open 2985196-2986266 1071_na     356_aa hypothetical protein
2574 CP014228.1 GCA_001553565.1_02574 CDS open 2986355-2987116 762_na     253_aa lnrK_4 Transcriptional regulatory protein LnrK
2575 CP014228.1 GCA_001553565.1_02575 CDS open 2987113-2988468 1356_na     451_aa hypothetical protein
2576 CP014228.1 GCA_001553565.1_02576 CDS open 2988589-2989428 840_na     279_aa putative ABC transporter ATP-binding protein
2577 CP014228.1 GCA_001553565.1_02577 CDS open 2989425-2990804 1380_na     459_aa hypothetical protein
2578 CP014228.1 GCA_001553565.1_02578 CDS open 2990911-2991099 189_na     62_aa hypothetical protein
2579 CP014228.1 GCA_001553565.1_02579 CDS open 2991110-2991619 510_na     169_aa hypothetical protein
2580 CP014228.1 GCA_001553565.1_02580 CDS open 2991582-2993966 2385_na     794_aa silP Silver exporting P-type ATPase
2581 CP014228.1 GCA_001553565.1_02581 CDS open 2994102-2994602 501_na     166_aa hypothetical protein
2582 CP014228.1 GCA_001553565.1_02582 CDS open 2994658-2995470 813_na     270_aa rutD Putative aminoacrylate hydrolase RutD
2583 CP014228.1 GCA_001553565.1_02583 CDS open 2995489-2997225 1737_na     578_aa miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
2584 CP014228.1 GCA_001553565.1_02584 CDS open 2997349-2998278 930_na     309_aa ilvE_2 Branched-chain-amino-acid aminotransferase
2585 CP014228.1 GCA_001553565.1_02585 CDS open 2998486-3000684 2199_na     732_aa rafA_2 Alpha-galactosidase
2586 CP014228.1 GCA_001553565.1_02586 CDS open 3000909-3003920 3012_na     1003_aa gcvP putative glycine dehydrogenase (decarboxylating)
2587 CP014228.1 GCA_001553565.1_02587 CDS open 3003922-3005226 1305_na     434_aa gcvT Aminomethyltransferase
2588 CP014228.1 GCA_001553565.1_02588 CDS open 3005272-3005661 390_na     129_aa gcvH Glycine cleavage system H protein
2589 CP014228.1 GCA_001553565.1_02589 CDS open 3005801-3006241 441_na     146_aa hypothetical protein
2590 CP014228.1 GCA_001553565.1_02590 CDS open 3006245-3008914 2670_na     889_aa nasD Nitrite reductase [NAD(P)H]
2591 CP014228.1 GCA_001553565.1_02591 CDS open 3009253-3010767 1515_na     504_aa hypothetical protein
2592 CP014228.1 GCA_001553565.1_02592 CDS open 3010852-3012720 1869_na     622_aa fhs Formate--tetrahydrofolate ligase
2593 CP014228.1 GCA_001553565.1_02593 CDS open 3012829-3013344 516_na     171_aa recX Regulatory protein RecX
2594 CP014228.1 GCA_001553565.1_02594 CDS open 3013344-3014534 1191_na     396_aa recA Protein RecA
2595 CP014228.1 GCA_001553565.1_02595 CDS open 3014850-3015074 225_na     74_aa hypothetical protein
2596 CP014228.1 GCA_001553565.1_02596 CDS open 3015232-3015591 360_na     119_aa hypothetical protein
2597 CP014228.1 GCA_001553565.1_02597 CDS open 3015875-3016411 537_na     178_aa cinA_2 Putative competence-damage inducible protein
2598 CP014228.1 GCA_001553565.1_02598 CDS open 3016422-3017060 639_na     212_aa pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
2599 CP014228.1 GCA_001553565.1_02599 CDS open 3017200-3018183 984_na     327_aa IS481 family transposase ISJs1
2600 CP014228.1 GCA_001553565.1_02600 CDS open 3018260-3019807 1548_na     515_aa hypothetical protein
2601 CP014228.1 GCA_001553565.1_02601 CDS open 3019862-3022783 2922_na     973_aa hypothetical protein
2602 CP014228.1 GCA_001553565.1_02602 CDS open 3023009-3023944 936_na     311_aa RBKS_3 Ribokinase
2603 CP014228.1 GCA_001553565.1_02603 CDS open 3023956-3025641 1686_na     561_aa rnj Ribonuclease J
2604 CP014228.1 tRNA open 3025905-3025978 tRNA-Glu(ctc)
2605 CP014228.1 tRNA open 3026013-3026086 tRNA-Glu(ctc)
2606 CP014228.1 tRNA open 3026170-3026242 tRNA-Gln(ctg)
2607 CP014228.1 GCA_001553565.1_02607 CDS open 3026473-3028047 1575_na     524_aa gltX Glutamate--tRNA ligase
2608 CP014228.1 GCA_001553565.1_02608 CDS open 3028119-3029366 1248_na     415_aa metC Cystathionine beta-lyase
2609 CP014228.1 GCA_001553565.1_02609 CDS open 3029422-3030246 825_na     274_aa hypothetical protein
2610 CP014228.1 GCA_001553565.1_02610 CDS open 3030387-3031931 1545_na     514_aa alsT_2 Amino-acid carrier protein AlsT
2611 CP014228.1 GCA_001553565.1_02611 CDS open 3032233-3033717 1485_na     494_aa alsT_3 Amino-acid carrier protein AlsT
2612 CP014228.1 GCA_001553565.1_02612 CDS open 3033721-3035247 1527_na     508_aa alsT_4 Amino-acid carrier protein AlsT
2613 CP014228.1 GCA_001553565.1_02613 CDS open 3035244-3036752 1509_na     502_aa alsT_5 Amino-acid carrier protein AlsT
2614 CP014228.1 GCA_001553565.1_02614 CDS open 3036987-3037277 291_na     96_aa hypothetical protein
2615 CP014228.1 GCA_001553565.1_02615 CDS open 3037407-3040115 2709_na     902_aa hypothetical protein
2616 CP014228.1 GCA_001553565.1_02616 CDS open 3040198-3041028 831_na     276_aa yfcA putative membrane transporter protein YfcA
2617 CP014228.1 GCA_001553565.1_02617 CDS open 3041066-3042010 945_na     314_aa mmuM Homocysteine S-methyltransferase
2618 CP014228.1 GCA_001553565.1_02618 CDS open 3042060-3043490 1431_na     476_aa rocC Amino-acid permease RocC
2619 CP014228.1 GCA_001553565.1_02619 CDS open 3043532-3044047 516_na     171_aa ybaK Cys-tRNA(Pro)Cys-tRNA(Cys) deacylase YbaK
2620 CP014228.1 GCA_001553565.1_02620 CDS open 3044068-3044376 309_na     102_aa hypothetical protein
2621 CP014228.1 GCA_001553565.1_02621 CDS open 3044417-3044800 384_na     127_aa yccF Inner membrane protein YccF
2622 CP014228.1 GCA_001553565.1_02622 CDS open 3044808-3045722 915_na     304_aa dcsG Cycloserine biosynthesis protein DcsG
2623 CP014228.1 GCA_001553565.1_02623 CDS open 3045787-3046809 1023_na     340_aa pip_2 Proline iminopeptidase
2624 CP014228.1 tRNA open 3046932-3047007 tRNA-Lys(ctt)
2625 CP014228.1 tRNA open 3047044-3047120 tRNA-Lys(ctt)
2626 CP014228.1 GCA_001553565.1_02626 CDS open 3047556-3047741 186_na     61_aa hypothetical protein
2627 CP014228.1 GCA_001553565.1_02627 CDS open 3047885-3048361 477_na     158_aa bcp Putative peroxiredoxin
2628 CP014228.1 GCA_001553565.1_02628 CDS open 3048457-3049596 1140_na     379_aa iolU_2 scyllo-inositol 2-dehydrogenase (NADP(+)) IolU
2629 CP014228.1 GCA_001553565.1_02629 CDS open 3049606-3050589 984_na     327_aa IS481 family transposase ISJs1
2630 CP014228.1 tRNA open 3050761-3050845 tRNA-Leu(tag)