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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Peptidiphaga gingivicola (GCA_001652275.1)

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PROKKA Annotations for GCA_001652275.1
Genome Selected: Peptidiphaga gingivicola
ContigsBases CDSrRNA tmRNAtRNA
3 2524828 2060 9 1 48
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:5]    |    Number of Records Found: 2123 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 LVZK01000003.1 GCA_001652275.1_02001 CDS open 299048-299797 750_na     249_aa opuBB_2 Choline transport system permease protein OpuBB
2002 LVZK01000003.1 GCA_001652275.1_02002 CDS open 299800-300783 984_na     327_aa osmX Osmoprotectant-binding protein OsmX
2003 LVZK01000003.1 GCA_001652275.1_02003 CDS open 300973-301254 282_na     93_aa hypothetical protein
2004 LVZK01000003.1 GCA_001652275.1_02004 CDS open 301273-301689 417_na     138_aa ndk Nucleoside diphosphate kinase
2005 LVZK01000003.1 GCA_001652275.1_02005 CDS open 301715-301918 204_na     67_aa hypothetical protein
2006 LVZK01000003.1 GCA_001652275.1_02006 CDS open 301915-303630 1716_na     571_aa murE_2 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase
2007 LVZK01000003.1 GCA_001652275.1_02007 CDS open 303691-306945 3255_na     1084_aa ileS Isoleucine--tRNA ligase
2008 LVZK01000003.1 GCA_001652275.1_02008 CDS open 307458-309485 2028_na     675_aa hypothetical protein
2009 LVZK01000003.1 GCA_001652275.1_02009 CDS open 310374-311519 1146_na     381_aa hypothetical protein
2010 LVZK01000003.1 GCA_001652275.1_02010 CDS open 311808-312605 798_na     265_aa putative oxidoreductase
2011 LVZK01000003.1 GCA_001652275.1_02011 CDS open 313020-313832 813_na     270_aa proC Pyrroline-5-carboxylate reductase
2012 LVZK01000003.1 GCA_001652275.1_02012 CDS open 314080-314499 420_na     139_aa hypothetical protein
2013 LVZK01000003.1 GCA_001652275.1_02013 CDS open 314514-315119 606_na     201_aa hypothetical protein
2014 LVZK01000003.1 GCA_001652275.1_02014 CDS open 315181-315822 642_na     213_aa hypothetical protein
2015 LVZK01000003.1 GCA_001652275.1_02015 CDS open 315843-317159 1317_na     438_aa hypothetical protein
2016 LVZK01000003.1 GCA_001652275.1_02016 CDS open 317803-320487 2685_na     894_aa valS Valine--tRNA ligase
2017 LVZK01000003.1 GCA_001652275.1_02017 CDS open 320776-322608 1833_na     610_aa Long-chain-fatty-acid--CoA ligase FadD15
2018 LVZK01000003.1 GCA_001652275.1_02018 CDS open 322605-322913 309_na     102_aa hypothetical protein
2019 LVZK01000003.1 GCA_001652275.1_02019 CDS open 322913-324172 1260_na     419_aa clpX ATP-dependent Clp protease ATP-binding subunit ClpX
2020 LVZK01000003.1 GCA_001652275.1_02020 CDS open 324319-324969 651_na     216_aa clpP2 ATP-dependent Clp protease proteolytic subunit 2
2021 LVZK01000003.1 GCA_001652275.1_02021 CDS open 325011-325622 612_na     203_aa clpP1 ATP-dependent Clp protease proteolytic subunit 1
2022 LVZK01000003.1 GCA_001652275.1_02022 CDS open 325771-327240 1470_na     489_aa tig Trigger factor
2023 LVZK01000003.1 GCA_001652275.1_02023 CDS open 327595-328437 843_na     280_aa hypothetical protein
2024 LVZK01000003.1 GCA_001652275.1_02024 CDS open 328608-329246 639_na     212_aa ompA Outer membrane protein A
2025 LVZK01000003.1 GCA_001652275.1_02025 CDS open 329243-329887 645_na     214_aa hypothetical protein
2026 LVZK01000003.1 GCA_001652275.1_02026 CDS open 330267-330938 672_na     223_aa hypothetical protein
2027 LVZK01000003.1 GCA_001652275.1_02027 CDS open 330982-331227 246_na     81_aa hypothetical protein
2028 LVZK01000003.1 GCA_001652275.1_02028 CDS open 331224-332375 1152_na     383_aa hypothetical protein
2029 LVZK01000003.1 GCA_001652275.1_02029 CDS open 332580-333122 543_na     180_aa hypothetical protein
2030 LVZK01000003.1 tRNA open 333228-333301 tRNA-Pro(tgg)
2031 LVZK01000003.1 tRNA open 333551-333624 tRNA-Gly(tcc)
2032 LVZK01000003.1 GCA_001652275.1_02032 CDS open 333945-334586 642_na     213_aa hypothetical protein
2033 LVZK01000003.1 GCA_001652275.1_02033 CDS open 334802-337471 2670_na     889_aa ydfJ Membrane protein YdfJ
2034 LVZK01000003.1 GCA_001652275.1_02034 CDS open 337482-339704 2223_na     740_aa hypothetical protein
2035 LVZK01000003.1 GCA_001652275.1_02035 CDS open 339743-342145 2403_na     800_aa hypothetical protein
2036 LVZK01000003.1 GCA_001652275.1_02036 CDS open 342308-342475 168_na     55_aa rpmF 50S ribosomal protein L32
2037 LVZK01000003.1 GCA_001652275.1_02037 CDS open 342794-343456 663_na     220_aa hypothetical protein
2038 LVZK01000003.1 GCA_001652275.1_02038 CDS open 343880-344815 936_na     311_aa cysK1 O-acetylserine sulfhydrylase
2039 LVZK01000003.1 GCA_001652275.1_02039 CDS open 344909-345484 576_na     191_aa cysE Serine acetyltransferase
2040 LVZK01000003.1 GCA_001652275.1_02040 CDS open 345511-345963 453_na     150_aa rpiB Ribose-5-phosphate isomerase B
2041 LVZK01000003.1 GCA_001652275.1_02041 CDS open 346112-348187 2076_na     691_aa pepO_1 Neutral endopeptidase
2042 LVZK01000003.1 GCA_001652275.1_02042 CDS open 348285-350348 2064_na     687_aa pepO_2 Neutral endopeptidase
2043 LVZK01000003.1 GCA_001652275.1_02043 CDS open 350441-351292 852_na     283_aa hypothetical protein
2044 LVZK01000003.1 GCA_001652275.1_02044 CDS open 351542-354097 2556_na     851_aa pepN Aminopeptidase N
2045 LVZK01000003.1 GCA_001652275.1_02045 CDS open 354287-355219 933_na     310_aa hypothetical protein
2046 LVZK01000003.1 GCA_001652275.1_02046 CDS open 355207-355443 237_na     78_aa hypothetical protein
2047 LVZK01000003.1 GCA_001652275.1_02047 CDS open 355519-355905 387_na     128_aa vsr Very short patch repair protein
2048 LVZK01000003.1 GCA_001652275.1_02048 CDS open 355892-356344 453_na     150_aa crr PTS system glucose-specific EIIA component
2049 LVZK01000003.1 GCA_001652275.1_02049 CDS open 356348-356584 237_na     78_aa nagF PTS system N-acetylglucosamine-specific EIIB component
2050 LVZK01000003.1 GCA_001652275.1_02050 CDS open 356810-358972 2163_na     720_aa malQ 4-alpha-glucanotransferase
2051 LVZK01000003.1 GCA_001652275.1_02051 CDS open 359265-360173 909_na     302_aa tesB Acyl-CoA thioesterase 2
2052 LVZK01000003.1 GCA_001652275.1_02052 CDS open 360277-361959 1683_na     560_aa ettA Energy-dependent translational throttle protein EttA
2053 LVZK01000003.1 GCA_001652275.1_02053 CDS open 362140-362835 696_na     231_aa Single-stranded DNA-binding protein
2054 LVZK01000003.1 GCA_001652275.1_02054 CDS open 363049-364575 1527_na     508_aa hypothetical protein
2055 LVZK01000003.1 GCA_001652275.1_02055 CDS open 364587-366209 1623_na     540_aa hypothetical protein
2056 LVZK01000003.1 tRNA open 366391-366464 tRNA-Arg(tct)
2057 LVZK01000003.1 GCA_001652275.1_02057 CDS open 366572-367231 660_na     219_aa orn Oligoribonuclease
2058 LVZK01000003.1 GCA_001652275.1_02058 CDS open 367228-368127 900_na     299_aa btuD_15 Vitamin B12 import ATP-binding protein BtuD
2059 LVZK01000003.1 GCA_001652275.1_02059 CDS open 368124-368801 678_na     225_aa tcyB L-cystine transport system permease protein TcyB
2060 LVZK01000003.1 GCA_001652275.1_02060 CDS open 368782-369441 660_na     219_aa glnP putative glutamine ABC transporter permease protein GlnP
2061 LVZK01000003.1 GCA_001652275.1_02061 CDS open 369575-370753 1179_na     392_aa mltF_2 Membrane-bound lytic murein transglycosylase F
2062 LVZK01000003.1 GCA_001652275.1_02062 CDS open 371241-372086 846_na     281_aa azoB NAD(P)H azoreductase
2063 LVZK01000003.1 GCA_001652275.1_02063 CDS open 372107-373189 1083_na     360_aa menH_3 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase
2064 LVZK01000003.1 GCA_001652275.1_02064 CDS open 373321-374712 1392_na     463_aa csbC putative metabolite transport protein CsbC
2065 LVZK01000003.1 GCA_001652275.1_02065 CDS open 374741-375703 963_na     320_aa RBKS Ribokinase
2066 LVZK01000003.1 GCA_001652275.1_02066 CDS open 375957-376652 696_na     231_aa hypothetical protein
2067 LVZK01000003.1 GCA_001652275.1_02067 CDS open 376649-377497 849_na     282_aa btuD_16 Vitamin B12 import ATP-binding protein BtuD
2068 LVZK01000003.1 GCA_001652275.1_02068 CDS open 377494-377934 441_na     146_aa hypothetical protein
2069 LVZK01000003.1 GCA_001652275.1_02069 CDS open 378161-380581 2421_na     806_aa pknD_4 Serinethreonine-protein kinase PknD
2070 LVZK01000003.1 GCA_001652275.1_02070 CDS open 380908-382527 1620_na     539_aa qacA Antiseptic resistance protein
2071 LVZK01000003.1 GCA_001652275.1_02071 CDS open 382581-383348 768_na     255_aa betI_3 HTH-type transcriptional regulator BetI
2072 LVZK01000003.1 GCA_001652275.1_02072 CDS open 383846-384673 828_na     275_aa hypothetical protein
2073 LVZK01000003.1 GCA_001652275.1_02073 CDS open 384994-386715 1722_na     573_aa hypothetical protein
2074 LVZK01000003.1 GCA_001652275.1_02074 CDS open 386702-386956 255_na     84_aa hypothetical protein
2075 LVZK01000003.1 GCA_001652275.1_02075 CDS open 386940-387905 966_na     321_aa hypothetical protein
2076 LVZK01000003.1 tRNA open 388314-388389 tRNA-His(gtg)
2077 LVZK01000003.1 GCA_001652275.1_02077 CDS open 388626-389549 924_na     307_aa dcsG Cycloserine biosynthesis protein DcsG
2078 LVZK01000003.1 tRNA open 389798-389871 tRNA-Lys(ctt)
2079 LVZK01000003.1 GCA_001652275.1_02079 CDS open 390154-390735 582_na     193_aa nemR HTH-type transcriptional repressor NemR
2080 LVZK01000003.1 GCA_001652275.1_02080 CDS open 390806-391363 558_na     185_aa hypothetical protein
2081 LVZK01000003.1 tRNA open 391423-391495 tRNA-Lys(ctt)
2082 LVZK01000003.1 GCA_001652275.1_02082 CDS open 391544-394513 2970_na     989_aa hypothetical protein
2083 LVZK01000003.1 GCA_001652275.1_02083 CDS open 394807-395706 900_na     299_aa yggS Pyridoxal phosphate homeostasis protein
2084 LVZK01000003.1 GCA_001652275.1_02084 CDS open 395853-396764 912_na     303_aa lipM Octanoyltransferase LipM
2085 LVZK01000003.1 GCA_001652275.1_02085 CDS open 396718-397851 1134_na     377_aa ilvE Branched-chain-amino-acid aminotransferase
2086 LVZK01000003.1 GCA_001652275.1_02086 CDS open 397986-399050 1065_na     354_aa leuB 3-isopropylmalate dehydrogenase
2087 LVZK01000003.1 GCA_001652275.1_02087 CDS open 399279-400229 951_na     316_aa hypothetical protein
2088 LVZK01000003.1 GCA_001652275.1_02088 CDS open 400778-401692 915_na     304_aa hypothetical protein
2089 LVZK01000003.1 GCA_001652275.1_02089 CDS open 401908-402312 405_na     134_aa hypothetical protein
2090 LVZK01000003.1 GCA_001652275.1_02090 CDS open 402327-403274 948_na     315_aa ygbT CRISPR-associated endonuclease Cas1
2091 LVZK01000003.1 GCA_001652275.1_02091 CDS open 403279-404211 933_na     310_aa hypothetical protein
2092 LVZK01000003.1 GCA_001652275.1_02092 CDS open 404228-405073 846_na     281_aa hypothetical protein
2093 LVZK01000003.1 GCA_001652275.1_02093 CDS open 405077-406216 1140_na     379_aa casC CRISPR system Cascade subunit CasC
2094 LVZK01000003.1 GCA_001652275.1_02094 CDS open 406266-406940 675_na     224_aa hypothetical protein
2095 LVZK01000003.1 GCA_001652275.1_02095 CDS open 406943-408592 1650_na     549_aa cse1 CRISPR-associated protein CasACse1
2096 LVZK01000003.1 GCA_001652275.1_02096 CDS open 408592-411732 3141_na     1046_aa cas3 CRISPR-associated nucleasehelicase Cas3
2097 LVZK01000003.1 GCA_001652275.1_02097 CDS open 416014-416583 570_na     189_aa hypothetical protein
2098 LVZK01000003.1 GCA_001652275.1_02098 CDS open 416588-417643 1056_na     351_aa hypothetical protein
2099 LVZK01000003.1 GCA_001652275.1_02099 CDS open 418440-419936 1497_na     498_aa mtlK Mannitol 2-dehydrogenase
2100 LVZK01000003.1 GCA_001652275.1_02100 CDS open 420163-421035 873_na     290_aa hypothetical protein
2101 LVZK01000003.1 GCA_001652275.1_02101 CDS open 421131-422735 1605_na     534_aa hypothetical protein
2102 LVZK01000003.1 GCA_001652275.1_02102 CDS open 422905-424248 1344_na     447_aa hypothetical protein
2103 LVZK01000003.1 GCA_001652275.1_02103 CDS open 424379-424648 270_na     89_aa hypothetical protein
2104 LVZK01000003.1 GCA_001652275.1_02104 CDS open 424653-425216 564_na     187_aa hypothetical protein
2105 LVZK01000003.1 GCA_001652275.1_02105 CDS open 425515-426546 1032_na     343_aa ilvC Ketol-acid reductoisomerase (NADP(+))
2106 LVZK01000003.1 GCA_001652275.1_02106 CDS open 426678-427196 519_na     172_aa ilvH Putative acetolactate synthase small subunit
2107 LVZK01000003.1 GCA_001652275.1_02107 CDS open 427208-429028 1821_na     606_aa ilvB1 Acetolactate synthase large subunit IlvB1
2108 LVZK01000003.1 GCA_001652275.1_02108 CDS open 429318-430655 1338_na     445_aa hypothetical protein
2109 LVZK01000003.1 GCA_001652275.1_02109 CDS open 430783-432405 1623_na     540_aa yidE Putative transport protein YidE
2110 LVZK01000003.1 GCA_001652275.1_02110 CDS open 432569-434401 1833_na     610_aa ilvD Dihydroxy-acid dehydratase
2111 LVZK01000003.1 GCA_001652275.1_02111 CDS open 434446-435777 1332_na     443_aa efeN putative deferrochelataseperoxidase EfeN
2112 LVZK01000003.1 GCA_001652275.1_02112 CDS open 435793-437001 1209_na     402_aa EfemEfeO family lipoprotein
2113 LVZK01000003.1 GCA_001652275.1_02113 CDS open 436994-437857 864_na     287_aa efeU Ferrous iron permease EfeU
2114 LVZK01000003.1 GCA_001652275.1_02114 CDS open 437925-439766 1842_na     613_aa btuD_17 Vitamin B12 import ATP-binding protein BtuD
2115 LVZK01000003.1 GCA_001652275.1_02115 CDS open 439745-441493 1749_na     582_aa btuD_18 Vitamin B12 import ATP-binding protein BtuD
2116 LVZK01000003.1 GCA_001652275.1_02116 CDS open 441724-443211 1488_na     495_aa hypothetical protein
2117 LVZK01000003.1 GCA_001652275.1_02117 CDS open 443433-443993 561_na     186_aa hypothetical protein
2118 LVZK01000003.1 GCA_001652275.1_02118 CDS open 444235-444582 348_na     115_aa hypothetical protein
2119 LVZK01000003.1 GCA_001652275.1_02119 CDS open 444829-445095 267_na     88_aa hypothetical protein
2120 LVZK01000003.1 GCA_001652275.1_02120 CDS open 445080-445667 588_na     195_aa hypothetical protein
2121 LVZK01000003.1 rRNA open 445927-446035 5S ribosomal RNA
2122 LVZK01000003.1 rRNA open 446155-449231 23S ribosomal RNA
2123 LVZK01000003.1 rRNA open 449410-450945 16S ribosomal RNA