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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Lactobacillus crispatus (GCA_002088015.1)

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PROKKA Annotations for GCA_002088015.1
Genome Selected: Lactobacillus crispatus
ContigsBases CDSrRNA tmRNAtRNA
129 2069542 2017 8 1 60
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Annotation Table [page:5]    |    Number of Records Found: 2123 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 NARH01000084.1 misc_RNA open 3406-3652 T-box
2002 NARH01000084.1 GCA_002088015.1_02002 CDS open 3732-4355 624_na     207_aa hypothetical protein
2003 NARH01000084.1 GCA_002088015.1_02003 CDS open 4342-4839 498_na     165_aa hypothetical protein
2004 NARH01000084.1 GCA_002088015.1_02004 CDS open 4965-5648 684_na     227_aa Potassium channel
2005 NARH01000085.1 GCA_002088015.1_02005 CDS open 219-740 522_na     173_aa hypothetical protein
2006 NARH01000085.1 GCA_002088015.1_02006 CDS open 914-1093 180_na     59_aa putative tautomerase
2007 NARH01000085.1 GCA_002088015.1_02007 CDS open 1141-2922 1782_na     593_aa hypothetical protein
2008 NARH01000085.1 GCA_002088015.1_02008 CDS open 2926-3801 876_na     291_aa menH_6 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase
2009 NARH01000085.1 GCA_002088015.1_02009 CDS open 3961-5199 1239_na     412_aa hypothetical protein
2010 NARH01000085.1 tRNA open 5461-5536 tRNA-Arg(tct)
2011 NARH01000086.1 rRNA open 313-1872 16S ribosomal RNA
2012 NARH01000086.1 rRNA open 2457-5360 23S ribosomal RNA
2013 NARH01000086.1 rRNA open 5436-5546 5S ribosomal RNA
2014 NARH01000087.1 GCA_002088015.1_02014 CDS open 68-805 738_na     245_aa Nucleotide-binding protein
2015 NARH01000087.1 GCA_002088015.1_02015 CDS open 816-1859 1044_na     347_aa Putative gluconeogenesis factor
2016 NARH01000087.1 GCA_002088015.1_02016 CDS open 1852-2787 936_na     311_aa whiA putative cell division protein WhiA
2017 NARH01000087.1 GCA_002088015.1_02017 CDS open 2852-3436 585_na     194_aa clpP ATP-dependent Clp protease proteolytic subunit
2018 NARH01000087.1 GCA_002088015.1_02018 CDS open 3631-5259 1629_na     542_aa hypothetical protein
2019 NARH01000088.1 GCA_002088015.1_02019 CDS open 230-412 183_na     60_aa hypothetical protein
2020 NARH01000088.1 GCA_002088015.1_02020 CDS open 617-2809 2193_na     730_aa clpE_2 ATP-dependent Clp protease ATP-binding subunit ClpE
2021 NARH01000088.1 GCA_002088015.1_02021 CDS open 2955-3236 282_na     93_aa hypothetical protein
2022 NARH01000088.1 GCA_002088015.1_02022 CDS open 3416-3613 198_na     65_aa hypothetical protein
2023 NARH01000088.1 GCA_002088015.1_02023 CDS open 3625-3957 333_na     110_aa hypothetical protein
2024 NARH01000088.1 GCA_002088015.1_02024 CDS open 4600-5037 438_na     145_aa hypothetical protein
2025 NARH01000089.1 GCA_002088015.1_02025 CDS open 195-1895 1701_na     566_aa hypothetical protein
2026 NARH01000089.1 GCA_002088015.1_02026 CDS open 2272-2592 321_na     106_aa hypothetical protein
2027 NARH01000089.1 tRNA open 2692-2778 tRNA-Leu(cag)
2028 NARH01000089.1 GCA_002088015.1_02028 CDS open 2866-4167 1302_na     433_aa dacA_2 D-alanyl-D-alanine carboxypeptidase DacA
2029 NARH01000089.1 GCA_002088015.1_02029 CDS open 4170-5018 849_na     282_aa nnrD ADP-dependent (S)-NAD(P)H-hydrate dehydratase
2030 NARH01000009.1 GCA_002088015.1_02030 CDS open 150-305 156_na     51_aa hypothetical protein
2031 NARH01000009.1 GCA_002088015.1_02031 CDS open 645-761 117_na     38_aa hypothetical protein
2032 NARH01000009.1 GCA_002088015.1_02032 CDS open 859-1215 357_na     118_aa hypothetical protein
2033 NARH01000009.1 GCA_002088015.1_02033 CDS open 1345-1578 234_na     77_aa hypothetical protein
2034 NARH01000009.1 GCA_002088015.1_02034 CDS open 1999-2622 624_na     207_aa rdgB dITPXTP pyrophosphatase
2035 NARH01000009.1 GCA_002088015.1_02035 CDS open 2764-3201 438_na     145_aa hypothetical protein
2036 NARH01000009.1 GCA_002088015.1_02036 CDS open 3251-4483 1233_na     410_aa cpdA_1 3%2C5-cyclic adenosine monophosphate phosphodiesterase CpdA
2037 NARH01000009.1 GCA_002088015.1_02037 CDS open 4487-5611 1125_na     374_aa rlmL Ribosomal RNA large subunit methyltransferase L
2038 NARH01000009.1 misc_RNA open 5678-6045 RNaseP_bact_b
2039 NARH01000009.1 GCA_002088015.1_02039 CDS open 6072-6482 411_na     136_aa gpsB_2 Cell cycle protein GpsB
2040 NARH01000009.1 GCA_002088015.1_02040 CDS open 6576-7145 570_na     189_aa hypothetical protein
2041 NARH01000009.1 GCA_002088015.1_02041 CDS open 7215-7844 630_na     209_aa recU Holliday junction resolvase RecU
2042 NARH01000009.1 GCA_002088015.1_02042 CDS open 7847-10159 2313_na     770_aa ponA Penicillin-binding protein 1A
2043 NARH01000009.1 GCA_002088015.1_02043 CDS open 10314-10943 630_na     209_aa nth Endonuclease III
2044 NARH01000009.1 GCA_002088015.1_02044 CDS open 10946-11590 645_na     214_aa dnaD DNA replication protein DnaD
2045 NARH01000009.1 GCA_002088015.1_02045 CDS open 11669-12967 1299_na     432_aa asnS Asparagine--tRNA ligase
2046 NARH01000009.1 GCA_002088015.1_02046 CDS open 13021-13518 498_na     165_aa hypothetical protein
2047 NARH01000009.1 GCA_002088015.1_02047 CDS open 13521-16301 2781_na     926_aa dinG_3 3-5 exonuclease DinG
2048 NARH01000009.1 GCA_002088015.1_02048 CDS open 16317-19925 3609_na     1202_aa addA ATP-dependent helicasenuclease subunit A
2049 NARH01000009.1 GCA_002088015.1_02049 CDS open 19928-23407 3480_na     1159_aa addB ATP-dependent helicasedeoxyribonuclease subunit B
2050 NARH01000009.1 GCA_002088015.1_02050 CDS open 23486-24394 909_na     302_aa galK_2 Galactokinase
2051 NARH01000009.1 GCA_002088015.1_02051 CDS open 24394-25356 963_na     320_aa hypothetical protein
2052 NARH01000009.1 GCA_002088015.1_02052 CDS open 25399-26481 1083_na     360_aa Phosphomevalonate kinase
2053 NARH01000009.1 GCA_002088015.1_02053 CDS open 26493-27509 1017_na     338_aa fni Isopentenyl-diphosphate delta-isomerase
2054 NARH01000009.1 GCA_002088015.1_02054 CDS open 27562-28353 792_na     263_aa ybjI_5 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YbjI
2055 NARH01000009.1 GCA_002088015.1_02055 CDS open 28350-29723 1374_na     457_aa rsmF Ribosomal RNA small subunit methyltransferase F
2056 NARH01000009.1 GCA_002088015.1_02056 CDS open 29704-30618 915_na     304_aa hypothetical protein
2057 NARH01000009.1 GCA_002088015.1_02057 CDS open 30671-31423 753_na     250_aa hypothetical protein
2058 NARH01000009.1 GCA_002088015.1_02058 CDS open 31506-32069 564_na     187_aa spsB_2 Signal peptidase IB
2059 NARH01000009.1 GCA_002088015.1_02059 CDS open 32140-32328 189_na     62_aa hypothetical protein
2060 NARH01000009.1 GCA_002088015.1_02060 CDS open 32461-32784 324_na     107_aa hypothetical protein
2061 NARH01000009.1 GCA_002088015.1_02061 CDS open 32796-33476 681_na     226_aa hypothetical protein
2062 NARH01000009.1 GCA_002088015.1_02062 CDS open 33639-34442 804_na     267_aa hypothetical protein
2063 NARH01000009.1 GCA_002088015.1_02063 CDS open 34452-35285 834_na     277_aa hypothetical protein
2064 NARH01000009.1 GCA_002088015.1_02064 CDS open 35282-35989 708_na     235_aa natA ABC transporter ATP-binding protein NatA
2065 NARH01000009.1 GCA_002088015.1_02065 CDS open 35986-36357 372_na     123_aa ytrA HTH-type transcriptional repressor YtrA
2066 NARH01000009.1 GCA_002088015.1_02066 CDS open 36664-37905 1242_na     413_aa pepT_2 Peptidase T
2067 NARH01000009.1 GCA_002088015.1_02067 CDS open 37924-38721 798_na     265_aa GTP cyclohydrolase 1 type 2
2068 NARH01000009.1 GCA_002088015.1_02068 CDS open 38718-39401 684_na     227_aa trmK tRNA (adenine(22)-N(1))-methyltransferase
2069 NARH01000009.1 GCA_002088015.1_02069 CDS open 39502-39942 441_na     146_aa hypothetical protein
2070 NARH01000009.1 GCA_002088015.1_02070 CDS open 39942-40616 675_na     224_aa hypothetical protein
2071 NARH01000009.1 GCA_002088015.1_02071 CDS open 40663-41775 1113_na     370_aa sigA RNA polymerase sigma factor SigA
2072 NARH01000009.1 GCA_002088015.1_02072 CDS open 41791-43611 1821_na     606_aa dnaG DNA primase
2073 NARH01000009.1 GCA_002088015.1_02073 CDS open 43641-45704 2064_na     687_aa glyS Glycine--tRNA ligase beta subunit
2074 NARH01000009.1 GCA_002088015.1_02074 CDS open 45697-46614 918_na     305_aa glyQ Glycine--tRNA ligase alpha subunit
2075 NARH01000009.1 GCA_002088015.1_02075 CDS open 46874-47629 756_na     251_aa recO DNA repair protein RecO
2076 NARH01000009.1 GCA_002088015.1_02076 CDS open 48367-49269 903_na     300_aa era GTPase Era
2077 NARH01000009.1 GCA_002088015.1_02077 CDS open 49269-49793 525_na     174_aa ybeY Endoribonuclease YbeY
2078 NARH01000009.1 GCA_002088015.1_02078 CDS open 49796-50755 960_na     319_aa PhoH-like protein
2079 NARH01000009.1 GCA_002088015.1_02079 CDS open 50781-51224 444_na     147_aa yqeY putative protein YqeY
2080 NARH01000009.1 GCA_002088015.1_02080 CDS open 51385-51561 177_na     58_aa rpsU 30S ribosomal protein S21
2081 NARH01000090.1 GCA_002088015.1_02081 CDS open 600-2666 2067_na     688_aa bcgIA Restriction enzyme BgcI subunit alpha
2082 NARH01000090.1 GCA_002088015.1_02082 CDS open 2659-3792 1134_na     377_aa bcgIB Restriction enzyme BgcI subunit beta
2083 NARH01000090.1 GCA_002088015.1_02083 CDS open 4074-4382 309_na     102_aa hypothetical protein
2084 NARH01000090.1 GCA_002088015.1_02084 CDS open 4382-4669 288_na     95_aa hypothetical protein
2085 NARH01000091.1 GCA_002088015.1_02085 CDS open 197-649 453_na     150_aa hypothetical protein
2086 NARH01000091.1 GCA_002088015.1_02086 CDS open 964-3168 2205_na     734_aa uvrA_3 UvrABC system protein A
2087 NARH01000091.1 GCA_002088015.1_02087 CDS open 3330-4319 990_na     329_aa mmuM Homocysteine S-methyltransferase
2088 NARH01000092.1 GCA_002088015.1_02088 CDS open 72-422 351_na     116_aa hypothetical protein
2089 NARH01000092.1 GCA_002088015.1_02089 CDS open 609-1940 1332_na     443_aa pyrP Uracil permease
2090 NARH01000092.1 GCA_002088015.1_02090 CDS open 1952-2479 528_na     175_aa pyrR_2 Bifunctional protein pyrR
2091 NARH01000092.1 misc_RNA open 2504-2623 PyrR
2092 NARH01000092.1 GCA_002088015.1_02092 CDS open 2764-4233 1470_na     489_aa bmr3_3 Multidrug resistance protein 3
2093 NARH01000093.1 GCA_002088015.1_02093 CDS open 199-564 366_na     121_aa hypothetical protein
2094 NARH01000093.1 GCA_002088015.1_02094 CDS open 668-1894 1227_na     408_aa cpdA_2 3%2C5-cyclic adenosine monophosphate phosphodiesterase CpdA
2095 NARH01000093.1 GCA_002088015.1_02095 CDS open 2460-2618 159_na     52_aa hypothetical protein
2096 NARH01000093.1 GCA_002088015.1_02096 CDS open 2763-2903 141_na     46_aa hypothetical protein
2097 NARH01000094.1 GCA_002088015.1_02097 CDS open 100-519 420_na     139_aa hypothetical protein
2098 NARH01000094.1 GCA_002088015.1_02098 CDS open 521-745 225_na     74_aa hypothetical protein
2099 NARH01000094.1 GCA_002088015.1_02099 CDS open 742-2250 1509_na     502_aa hypothetical protein
2100 NARH01000094.1 GCA_002088015.1_02100 CDS open 3125-3646 522_na     173_aa hypothetical protein
2101 NARH01000095.1 GCA_002088015.1_02101 CDS open 198-413 216_na     71_aa hypothetical protein
2102 NARH01000095.1 GCA_002088015.1_02102 CDS open 401-817 417_na     138_aa hypothetical protein
2103 NARH01000095.1 GCA_002088015.1_02103 CDS open 953-1393 441_na     146_aa clcA_2 H(+)Cl(-) exchange transporter ClcA
2104 NARH01000095.1 GCA_002088015.1_02104 CDS open 1400-2254 855_na     284_aa clcA_3 H(+)Cl(-) exchange transporter ClcA
2105 NARH01000095.1 GCA_002088015.1_02105 CDS open 2309-3700 1392_na     463_aa ISNCY family transposase ISSeq2
2106 NARH01000096.1 GCA_002088015.1_02106 CDS open 228-887 660_na     219_aa hypothetical protein
2107 NARH01000096.1 GCA_002088015.1_02107 CDS open 880-1824 945_na     314_aa hypothetical protein
2108 NARH01000096.1 GCA_002088015.1_02108 CDS open 1805-3121 1317_na     438_aa hypothetical protein
2109 NARH01000096.1 GCA_002088015.1_02109 CDS open 3099-3638 540_na     179_aa hypothetical protein
2110 NARH01000097.1 GCA_002088015.1_02110 CDS open 300-590 291_na     96_aa rpmA 50S ribosomal protein L27
2111 NARH01000097.1 GCA_002088015.1_02111 CDS open 609-920 312_na     103_aa rplU 50S ribosomal protein L21
2112 NARH01000097.1 misc_RNA open 936-1016 L21_leader
2113 NARH01000097.1 GCA_002088015.1_02113 CDS open 1079-1720 642_na     213_aa hypothetical protein
2114 NARH01000097.1 GCA_002088015.1_02114 CDS open 1995-3269 1275_na     424_aa hypothetical protein
2115 NARH01000098.1 GCA_002088015.1_02115 CDS open 95-355 261_na     86_aa yoeB_2 Toxin YoeB
2116 NARH01000098.1 GCA_002088015.1_02116 CDS open 352-627 276_na     91_aa hypothetical protein
2117 NARH01000098.1 GCA_002088015.1_02117 CDS open 1066-1476 411_na     136_aa hypothetical protein
2118 NARH01000098.1 GCA_002088015.1_02118 CDS open 1482-1736 255_na     84_aa hypothetical protein
2119 NARH01000098.1 GCA_002088015.1_02119 CDS open 1846-2532 687_na     228_aa gatD Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD
2120 NARH01000098.1 GCA_002088015.1_02120 CDS open 2577-3062 486_na     161_aa hypothetical protein
2121 NARH01000099.1 GCA_002088015.1_02121 CDS open 194-1075 882_na     293_aa hypothetical protein
2122 NARH01000099.1 GCA_002088015.1_02122 CDS open 1072-2190 1119_na     372_aa hypothetical protein
2123 NARH01000099.1 GCA_002088015.1_02123 CDS open 2296-3114 819_na     272_aa citG 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase