HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus caprae (GCA_002902725.1)

Select a Genome:
PROKKA Annotations for GCA_002902725.1
Genome Selected: Staphylococcus caprae
ContigsBases CDSrRNA tmRNAtRNA
101 2606761 2468 7 1 58
[Table]   [NA Fasta]   [AA Fasta]      [Browser]   [Text]   [Excel]  
Search & Sort all 2612 Records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:6]    |    Number of Records Found: 2612 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 PPRT01000009.1 GCA_002902725.1_02501 CDS open 18368-19102 735_na     244_aa cysH Phosphoadenosine phosphosulfate reductase
2502 PPRT01000009.1 GCA_002902725.1_02502 CDS open 19311-19805 495_na     164_aa bsaA_2 Glutathione peroxidase BsaA
2503 PPRT01000009.1 GCA_002902725.1_02503 CDS open 19818-21161 1344_na     447_aa garB Glutathione amide reductase
2504 PPRT01000009.1 GCA_002902725.1_02504 CDS open 21178-21618 441_na     146_aa hypothetical protein
2505 PPRT01000009.1 GCA_002902725.1_02505 CDS open 21800-22528 729_na     242_aa hypothetical protein
2506 PPRT01000009.1 GCA_002902725.1_02506 CDS open 22913-24034 1122_na     373_aa hypothetical protein
2507 PPRT01000009.1 GCA_002902725.1_02507 CDS open 24031-25218 1188_na     395_aa hypothetical protein
2508 PPRT01000009.1 GCA_002902725.1_02508 CDS open 25355-26947 1593_na     530_aa yidK putative symporter YidK
2509 PPRT01000009.1 GCA_002902725.1_02509 CDS open 27260-28024 765_na     254_aa hypothetical protein
2510 PPRT01000009.1 GCA_002902725.1_02510 CDS open 28163-30172 2010_na     669_aa yxdM ABC transporter permease protein YxdM
2511 PPRT01000009.1 GCA_002902725.1_02511 CDS open 30174-30926 753_na     250_aa yxdL ABC transporter ATP-binding protein YxdL
2512 PPRT01000009.1 GCA_002902725.1_02512 CDS open 31034-31930 897_na     298_aa graS_2 Sensor histidine kinase GraS
2513 PPRT01000009.1 GCA_002902725.1_02513 CDS open 31936-32601 666_na     221_aa graR_2 Response regulator protein GraR
2514 PPRT01000009.1 GCA_002902725.1_02514 CDS open 32633-32785 153_na     50_aa hypothetical protein
2515 PPRT01000009.1 GCA_002902725.1_02515 CDS open 33119-34603 1485_na     494_aa phoB Alkaline phosphatase 3
2516 PPRT01000009.1 misc_RNA open 33932-34035 sau-13
2517 PPRT01000009.1 GCA_002902725.1_02517 CDS open 34732-34857 126_na     41_aa hypothetical protein
2518 PPRT01000009.1 GCA_002902725.1_02518 CDS open 34991-35092 102_na     33_aa putative protein.1
2519 PPRT01000009.1 GCA_002902725.1_02519 CDS open 35365-35991 627_na     208_aa azoR FMN-dependent NADH-azoreductase
2520 PPRT01000009.1 GCA_002902725.1_02520 CDS open 36066-36953 888_na     295_aa hypothetical protein
2521 PPRT01000009.1 GCA_002902725.1_02521 CDS open 37139-38686 1548_na     515_aa hypothetical protein
2522 PPRT01000009.1 GCA_002902725.1_02522 CDS open 38919-39020 102_na     33_aa hypothetical protein
2523 PPRT01000009.1 GCA_002902725.1_02523 CDS open 39131-39577 447_na     148_aa hypothetical protein
2524 PPRT01000009.1 GCA_002902725.1_02524 CDS open 39749-41389 1641_na     546_aa ipdC Indole-3-pyruvate decarboxylase
2525 PPRT01000009.1 GCA_002902725.1_02525 CDS open 41504-42361 858_na     285_aa yfmC_2 Fe(3+)-citrate-binding protein YfmC
2526 PPRT01000009.1 GCA_002902725.1_02526 CDS open 42551-42808 258_na     85_aa yefM Antitoxin YefM
2527 PPRT01000009.1 GCA_002902725.1_02527 CDS open 42801-43070 270_na     89_aa yoeB Toxin YoeB
2528 PPRT01000009.1 GCA_002902725.1_02528 CDS open 43215-43580 366_na     121_aa hypothetical protein
2529 PPRT01000009.1 GCA_002902725.1_02529 CDS open 43631-44770 1140_na     379_aa hypothetical protein
2530 PPRT01000083.1 GCA_002902725.1_02530 CDS open 483-1880 1398_na     465_aa nhaC Na(+)H(+) antiporter NhaC
2531 PPRT01000083.1 GCA_002902725.1_02531 CDS open 1941-3791 1851_na     616_aa hypothetical protein
2532 PPRT01000085.1 GCA_002902725.1_02532 CDS open 194-1144 951_na     316_aa tagU_3 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU
2533 PPRT01000086.1 GCA_002902725.1_02533 CDS open 81-929 849_na     282_aa ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
2534 PPRT01000086.1 GCA_002902725.1_02534 CDS open 944-1768 825_na     274_aa purR Pur operon repressor
2535 PPRT01000086.1 GCA_002902725.1_02535 CDS open 1787-2167 381_na     126_aa yabJ 2-iminobutanoate2-iminopropanoate deaminase
2536 PPRT01000086.1 GCA_002902725.1_02536 CDS open 2231-2545 315_na     104_aa spoVG Putative septation protein SpoVG
2537 PPRT01000086.1 GCA_002902725.1_02537 CDS open 2771-4126 1356_na     451_aa glmU Bifunctional protein GlmU
2538 PPRT01000086.1 GCA_002902725.1_02538 CDS open 4274-5239 966_na     321_aa prs Ribose-phosphate pyrophosphokinase
2539 PPRT01000086.1 GCA_002902725.1_02539 CDS open 5412-6068 657_na     218_aa rplY 50S ribosomal protein L25
2540 PPRT01000086.1 GCA_002902725.1_02540 CDS open 6315-6887 573_na     190_aa pth Peptidyl-tRNA hydrolase
2541 PPRT01000086.1 GCA_002902725.1_02541 CDS open 6884-10393 3510_na     1169_aa mfd Transcription-repair-coupling factor
2542 PPRT01000086.1 GCA_002902725.1_02542 CDS open 10383-11924 1542_na     513_aa hypothetical protein
2543 PPRT01000086.1 GCA_002902725.1_02543 CDS open 11921-13111 1191_na     396_aa hypothetical protein
2544 PPRT01000086.1 GCA_002902725.1_02544 CDS open 13108-13371 264_na     87_aa hypothetical protein
2545 PPRT01000086.1 GCA_002902725.1_02545 CDS open 13395-13796 402_na     133_aa ftsL_2 Cell division protein FtsL
2546 PPRT01000086.1 GCA_002902725.1_02546 CDS open 13893-14297 405_na     134_aa yugI_2 General stress protein 13
2547 PPRT01000086.1 GCA_002902725.1_02547 CDS open 14503-15801 1299_na     432_aa tilS tRNA(Ile)-lysidine synthase
2548 PPRT01000086.1 GCA_002902725.1_02548 CDS open 15804-16343 540_na     179_aa hpt Hypoxanthine-guanine phosphoribosyltransferase
2549 PPRT01000086.1 GCA_002902725.1_02549 CDS open 16363-16452 90_na     29_aa hypothetical protein
2550 PPRT01000086.1 GCA_002902725.1_02550 CDS open 16643-18772 2130_na     709_aa ftsH ATP-dependent zinc metalloprotease FtsH
2551 PPRT01000086.1 GCA_002902725.1_02551 CDS open 19074-19955 882_na     293_aa hslO 33 kDa chaperonin
2552 PPRT01000086.1 GCA_002902725.1_02552 CDS open 20276-21208 933_na     310_aa cysK Cysteine synthase
2553 PPRT01000086.1 GCA_002902725.1_02553 CDS open 21518-22321 804_na     267_aa folP Dihydropteroate synthase
2554 PPRT01000086.1 GCA_002902725.1_02554 CDS open 22299-22664 366_na     121_aa folB Dihydroneopterin aldolase
2555 PPRT01000086.1 GCA_002902725.1_02555 CDS open 22665-23144 480_na     159_aa folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
2556 PPRT01000086.1 GCA_002902725.1_02556 CDS open 23141-23380 240_na     79_aa hypothetical protein
2557 PPRT01000086.1 GCA_002902725.1_02557 CDS open 23394-24881 1488_na     495_aa lysS Lysine--tRNA ligase
2558 PPRT01000086.1 rRNA open 25406-25514 5S ribosomal RNA
2559 PPRT01000086.1 tRNA open 25532-25607 tRNA-Val(tac)
2560 PPRT01000086.1 tRNA open 25613-25688 tRNA-Thr(tgt)
2561 PPRT01000086.1 tRNA open 25694-25768 tRNA-Lys(ttt)
2562 PPRT01000086.1 tRNA open 25786-25860 tRNA-Gly(gcc)
2563 PPRT01000086.1 tRNA open 25868-25956 tRNA-Leu(taa)
2564 PPRT01000086.1 tRNA open 25967-26041 tRNA-Arg(acg)
2565 PPRT01000086.1 tRNA open 26071-26145 tRNA-Pro(tgg)
2566 PPRT01000086.1 tRNA open 26163-26238 tRNA-Ala(tgc)
2567 PPRT01000087.1 GCA_002902725.1_02567 CDS open 8-517 510_na     169_aa hypothetical protein
2568 PPRT01000087.1 GCA_002902725.1_02568 CDS open 778-1494 717_na     238_aa hypothetical protein
2569 PPRT01000087.1 GCA_002902725.1_02569 CDS open 1732-2532 801_na     266_aa pip Proline iminopeptidase
2570 PPRT01000087.1 GCA_002902725.1_02570 CDS open 2754-3128 375_na     124_aa sarA Transcriptional regulator SarA
2571 PPRT01000088.1 GCA_002902725.1_02571 CDS open 1148-1537 390_na     129_aa speG Spermidine N(1)-acetyltransferase
2572 PPRT01000088.1 GCA_002902725.1_02572 CDS open 1574-2908 1335_na     444_aa speA Arginine decarboxylase
2573 PPRT01000088.1 GCA_002902725.1_02573 CDS open 2910-3527 618_na     205_aa tmk Thymidylate kinase
2574 PPRT01000088.1 GCA_002902725.1_02574 CDS open 3556-3885 330_na     109_aa darA Cyclic di-AMP receptor A
2575 PPRT01000088.1 GCA_002902725.1_02575 CDS open 4201-5127 927_na     308_aa hypothetical protein
2576 PPRT01000088.1 GCA_002902725.1_02576 CDS open 5129-5932 804_na     267_aa hypothetical protein
2577 PPRT01000088.1 GCA_002902725.1_02577 CDS open 5949-6296 348_na     115_aa yabA Initiation-control protein YabA
2578 PPRT01000088.1 GCA_002902725.1_02578 CDS open 6395-7120 726_na     241_aa yfiC tRNA1(Val) (adenine(37)-N6)-methyltransferase
2579 PPRT01000088.1 GCA_002902725.1_02579 CDS open 7113-7361 249_na     82_aa hypothetical protein
2580 PPRT01000088.1 GCA_002902725.1_02580 CDS open 7363-8202 840_na     279_aa rsmI Ribosomal RNA small subunit methyltransferase I
2581 PPRT01000088.1 GCA_002902725.1_02581 CDS open 8418-10388 1971_na     656_aa metG Methionine--tRNA ligase
2582 PPRT01000088.1 GCA_002902725.1_02582 CDS open 10413-11189 777_na     258_aa dtd3 D-aminoacyl-tRNA deacylase
2583 PPRT01000088.1 GCA_002902725.1_02583 CDS open 11425-11976 552_na     183_aa rnmV_2 Ribonuclease M5
2584 PPRT01000088.1 GCA_002902725.1_02584 CDS open 11977-12867 891_na     296_aa rsmA Ribosomal RNA small subunit methyltransferase A
2585 PPRT01000088.1 GCA_002902725.1_02585 CDS open 12967-13230 264_na     87_aa veg Protein Veg
2586 PPRT01000089.1 GCA_002902725.1_02586 CDS open 79-654 576_na     191_aa agrB Accessory gene regulator protein B
2587 PPRT01000089.1 GCA_002902725.1_02587 CDS open 651-794 144_na     47_aa hypothetical protein
2588 PPRT01000089.1 GCA_002902725.1_02588 CDS open 839-2134 1296_na     431_aa hypothetical protein
2589 PPRT01000089.1 GCA_002902725.1_02589 CDS open 2149-2865 717_na     238_aa agrA Accessory gene regulator protein A
2590 PPRT01000089.1 GCA_002902725.1_02590 CDS open 2938-4413 1476_na     491_aa scrB Sucrose-6-phosphate hydrolase
2591 PPRT01000089.1 GCA_002902725.1_02591 CDS open 4736-5986 1251_na     416_aa nrgA Ammonium transporter
2592 PPRT01000089.1 GCA_002902725.1_02592 CDS open 6165-6389 225_na     74_aa yeeD Putative sulfur carrier protein YeeD
2593 PPRT01000089.1 GCA_002902725.1_02593 CDS open 6402-7496 1095_na     364_aa hypothetical protein
2594 PPRT01000089.1 GCA_002902725.1_02594 CDS open 7770-8057 288_na     95_aa hypothetical protein
2595 PPRT01000089.1 GCA_002902725.1_02595 CDS open 8146-8787 642_na     213_aa rex Redox-sensing transcriptional repressor Rex
2596 PPRT01000089.1 GCA_002902725.1_02596 CDS open 9146-11077 1932_na     643_aa yheS putative ABC transporter ATP-binding protein YheS
2597 PPRT01000089.1 GCA_002902725.1_02597 CDS open 11419-13035 1617_na     538_aa mutS_2 DNA mismatch repair protein MutS
2598 PPRT01000089.1 GCA_002902725.1_02598 CDS open 13134-14174 1041_na     346_aa tsaD tRNA N6-adenosine threonylcarbamoyltransferase
2599 PPRT01000089.1 GCA_002902725.1_02599 CDS open 14156-14617 462_na     153_aa rimI [Ribosomal protein S18]-alanine N-acetyltransferase
2600 PPRT01000089.1 GCA_002902725.1_02600 CDS open 14590-15252 663_na     220_aa tsaB tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
2601 PPRT01000089.1 GCA_002902725.1_02601 CDS open 15233-15697 465_na     154_aa tsaE tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
2602 PPRT01000089.1 misc_RNA open 16269-16478 rli60
2603 PPRT01000089.1 GCA_002902725.1_02603 CDS open 16540-18228 1689_na     562_aa ilvD Dihydroxy-acid dehydratase
2604 PPRT01000089.1 GCA_002902725.1_02604 CDS open 18245-20032 1788_na     595_aa ilvB Acetolactate synthase large subunit
2605 PPRT01000089.1 GCA_002902725.1_02605 CDS open 20032-20265 234_na     77_aa hypothetical protein
2606 PPRT01000089.1 GCA_002902725.1_02606 CDS open 20393-21397 1005_na     334_aa ilvC Ketol-acid reductoisomerase (NADP(+))
2607 PPRT01000089.1 GCA_002902725.1_02607 CDS open 21424-22956 1533_na     510_aa leuA 2-isopropylmalate synthase
2608 PPRT01000089.1 GCA_002902725.1_02608 CDS open 22956-23999 1044_na     347_aa leuB 3-isopropylmalate dehydrogenase
2609 PPRT01000089.1 GCA_002902725.1_02609 CDS open 24017-25387 1371_na     456_aa leuC 3-isopropylmalate dehydratase large subunit
2610 PPRT01000089.1 GCA_002902725.1_02610 CDS open 25388-25957 570_na     189_aa leuD 3-isopropylmalate dehydratase small subunit
2611 PPRT01000089.1 GCA_002902725.1_02611 CDS open 25973-27241 1269_na     422_aa ilvA L-threonine dehydratase biosynthetic IlvA
2612 PPRT01000089.1 rRNA open 27759-27867 5S ribosomal RNA