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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Lactobacillus acidophilus (GCA_003047065.1)

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PROKKA Annotations for GCA_003047065.1
Genome Selected: Lactobacillus acidophilus
ContigsBases CDSrRNA tmRNAtRNA
1 2009973 1917 12 1 60
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:5]    |    Number of Records Found: 2033 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 CP020620.1 GCA_003047065.1_02001 CDS open 1982493-1983329 837_na     278_aa hypothetical protein
2002 CP020620.1 GCA_003047065.1_02002 CDS open 1983331-1983951 621_na     206_aa rsmC Ribosomal RNA small subunit methyltransferase C
2003 CP020620.1 GCA_003047065.1_02003 CDS open 1984086-1984268 183_na     60_aa hypothetical protein
2004 CP020620.1 GCA_003047065.1_02004 CDS open 1984356-1984862 507_na     168_aa tadA_2 tRNA-specific adenosine deaminase
2005 CP020620.1 misc_RNA open 1984909-1985002 Bacteria_small_SRP
2006 CP020620.1 GCA_003047065.1_02006 CDS open 1985057-1986847 1791_na     596_aa ruvB_2 Holliday junction ATP-dependent DNA helicase RuvB
2007 CP020620.1 GCA_003047065.1_02007 CDS open 1987025-1988182 1158_na     385_aa hypothetical protein
2008 CP020620.1 misc_RNA open 1988221-1988278 Transposase-1
2009 CP020620.1 GCA_003047065.1_02009 CDS open 1988380-1988715 336_na     111_aa ybaB_2 Nucleoid-associated protein YbaB
2010 CP020620.1 GCA_003047065.1_02010 CDS open 1988716-1989315 600_na     199_aa recR_2 Recombination protein RecR
2011 CP020620.1 GCA_003047065.1_02011 CDS open 1989315-1989554 240_na     79_aa hypothetical protein
2012 CP020620.1 GCA_003047065.1_02012 CDS open 1989656-1990306 651_na     216_aa tmk_2 Thymidylate kinase
2013 CP020620.1 GCA_003047065.1_02013 CDS open 1990307-1990627 321_na     106_aa darA Cyclic di-AMP receptor A
2014 CP020620.1 GCA_003047065.1_02014 CDS open 1990628-1991485 858_na     285_aa hypothetical protein
2015 CP020620.1 GCA_003047065.1_02015 CDS open 1991476-1991847 372_na     123_aa Initiation-control protein YabA
2016 CP020620.1 GCA_003047065.1_02016 CDS open 1991847-1992371 525_na     174_aa rsmI_3 Ribosomal RNA small subunit methyltransferase I
2017 CP020620.1 GCA_003047065.1_02017 CDS open 1992389-1992700 312_na     103_aa rsmI_4 Ribosomal RNA small subunit methyltransferase I
2018 CP020620.1 GCA_003047065.1_02018 CDS open 1992703-1993440 738_na     245_aa hypothetical protein
2019 CP020620.1 GCA_003047065.1_02019 CDS open 1993488-1994006 519_na     172_aa folT_2 Folate transporter FolT
2020 CP020620.1 GCA_003047065.1_02020 CDS open 1994034-1994768 735_na     244_aa tsaB_2 tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
2021 CP020620.1 GCA_003047065.1_02021 CDS open 1994752-1995324 573_na     190_aa hypothetical protein
2022 CP020620.1 GCA_003047065.1_02022 CDS open 1995321-1996370 1050_na     349_aa tsaD_2 tRNA N6-adenosine threonylcarbamoyltransferase
2023 CP020620.1 GCA_003047065.1_02023 CDS open 1996508-1997221 714_na     237_aa deoC2_2 Deoxyribose-phosphate aldolase 2
2024 CP020620.1 GCA_003047065.1_02024 CDS open 1997231-1998202 972_na     323_aa iolU_3 scyllo-inositol 2-dehydrogenase (NADP(+)) IolU
2025 CP020620.1 GCA_003047065.1_02025 CDS open 1998195-1998905 711_na     236_aa nagR_3 HTH-type transcriptional repressor NagR
2026 CP020620.1 GCA_003047065.1_02026 CDS open 1998954-2000141 1188_na     395_aa uctC_2 Acetyl-CoA:oxalate CoA-transferase
2027 CP020620.1 GCA_003047065.1_02027 CDS open 2000213-2001550 1338_na     445_aa frc_2 Formyl-CoA:oxalate CoA-transferase
2028 CP020620.1 GCA_003047065.1_02028 CDS open 2001550-2003316 1767_na     588_aa oxc_2 Oxalyl-CoA decarboxylase
2029 CP020620.1 GCA_003047065.1_02029 CDS open 2003438-2005357 1920_na     639_aa ettA_2 Energy-dependent translational throttle protein EttA
2030 CP020620.1 GCA_003047065.1_02030 CDS open 2005541-2006176 636_na     211_aa rex_2 Redox-sensing transcriptional repressor Rex
2031 CP020620.1 GCA_003047065.1_02031 CDS open 2006956-2007201 246_na     81_aa ascG HTH-type transcriptional regulator AscG
2032 CP020620.1 GCA_003047065.1_02032 CDS open 2008871-2008963 93_na     30_aa hypothetical protein
2033 CP020620.1 GCA_003047065.1_02033 CDS open 2008954-2009442 489_na     162_aa treP PTS system trehalose-specific EIIBC component