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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Porphyromonas gingivalis (GCA_018141745.1)

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PROKKA Annotations for GCA_018141745.1
Genome Selected: Porphyromonas gingivalis
ContigsBases CDSrRNA tmRNAtRNA
1 2411481 2078 12 1 53
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Annotation Table [page:5]    |    Number of Records Found: 2160 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 CP073350.1 GCA_018141745.1_02001 CDS open 2218786-2219685 900_na     299_aa era GTPase Era
2002 CP073350.1 GCA_018141745.1_02002 CDS open 2219748-2221061 1314_na     437_aa der_3 GTPase Der
2003 CP073350.1 GCA_018141745.1_02003 CDS open 2221112-2224411 3300_na     1099_aa hypothetical protein
2004 CP073350.1 GCA_018141745.1_02004 CDS open 2224412-2225059 648_na     215_aa pgdA Peptidoglycan-N-acetylglucosamine deacetylase
2005 CP073350.1 GCA_018141745.1_02005 CDS open 2225085-2225771 687_na     228_aa mnmC tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC
2006 CP073350.1 GCA_018141745.1_02006 CDS open 2225970-2226551 582_na     193_aa xpt Xanthine phosphoribosyltransferase
2007 CP073350.1 GCA_018141745.1_02007 CDS open 2226588-2227925 1338_na     445_aa xanP Xanthine permease XanP
2008 CP073350.1 GCA_018141745.1_02008 CDS open 2228087-2228758 672_na     223_aa hypothetical protein
2009 CP073350.1 GCA_018141745.1_02009 CDS open 2228818-2230323 1506_na     501_aa hypothetical protein
2010 CP073350.1 GCA_018141745.1_02010 CDS open 2230928-2231503 576_na     191_aa hypothetical protein
2011 CP073350.1 tRNA open 2231785-2231858 tRNA-Pro(cgg)
2012 CP073350.1 GCA_018141745.1_02012 CDS open 2231979-2232164 186_na     61_aa hypothetical protein
2013 CP073350.1 GCA_018141745.1_02013 CDS open 2232191-2233090 900_na     299_aa hypothetical protein
2014 CP073350.1 GCA_018141745.1_02014 CDS open 2233127-2233873 747_na     248_aa rsmE Ribosomal RNA small subunit methyltransferase E
2015 CP073350.1 GCA_018141745.1_02015 CDS open 2234221-2235222 1002_na     333_aa hypothetical protein
2016 CP073350.1 GCA_018141745.1_02016 CDS open 2235246-2235671 426_na     141_aa sufE Cysteine desulfuration protein SufE
2017 CP073350.1 GCA_018141745.1_02017 CDS open 2235675-2237072 1398_na     465_aa hemY Protoporphyrinogen oxidase
2018 CP073350.1 GCA_018141745.1_02018 CDS open 2237972-2238871 900_na     299_aa hypothetical protein
2019 CP073350.1 GCA_018141745.1_02019 CDS open 2238868-2240019 1152_na     383_aa lpxB Lipid-A-disaccharide synthase
2020 CP073350.1 GCA_018141745.1_02020 CDS open 2240056-2240826 771_na     256_aa surE 5-nucleotidase SurE
2021 CP073350.1 GCA_018141745.1_02021 CDS open 2240823-2241380 558_na     185_aa hypothetical protein
2022 CP073350.1 GCA_018141745.1_02022 CDS open 2241377-2242993 1617_na     538_aa glyQS Glycine--tRNA ligase
2023 CP073350.1 GCA_018141745.1_02023 CDS open 2243104-2243361 258_na     85_aa hypothetical protein
2024 CP073350.1 GCA_018141745.1_02024 CDS open 2243384-2244823 1440_na     479_aa hypothetical protein
2025 CP073350.1 GCA_018141745.1_02025 CDS open 2244868-2245461 594_na     197_aa hypothetical protein
2026 CP073350.1 GCA_018141745.1_02026 CDS open 2245853-2246209 357_na     118_aa hypothetical protein
2027 CP073350.1 GCA_018141745.1_02027 CDS open 2246155-2246934 780_na     259_aa IS5 family transposase ISPg8
2028 CP073350.1 GCA_018141745.1_02028 CDS open 2247179-2247484 306_na     101_aa hypothetical protein
2029 CP073350.1 GCA_018141745.1_02029 CDS open 2247731-2248633 903_na     300_aa IS982 family transposase IS195
2030 CP073350.1 GCA_018141745.1_02030 CDS open 2248915-2250846 1932_na     643_aa hypothetical protein
2031 CP073350.1 GCA_018141745.1_02031 CDS open 2250850-2253393 2544_na     847_aa hypothetical protein
2032 CP073350.1 GCA_018141745.1_02032 CDS open 2253559-2254500 942_na     313_aa fmt Methionyl-tRNA formyltransferase
2033 CP073350.1 tRNA open 2254756-2254830 tRNA-Asp(gtc)
2034 CP073350.1 GCA_018141745.1_02034 CDS open 2255077-2260185 5109_na     1702_aa kgp_3 Lys-gingipain HG66
2035 CP073350.1 GCA_018141745.1_02035 CDS open 2260684-2261463 780_na     259_aa IS5 family transposase ISPg8
2036 CP073350.1 GCA_018141745.1_02036 CDS open 2261466-2261768 303_na     100_aa IS5 family transposase ISPg8
2037 CP073350.1 GCA_018141745.1_02037 CDS open 2262297-2262830 534_na     177_aa pspB Putative phosphoserine phosphatase 2
2038 CP073350.1 GCA_018141745.1_02038 CDS open 2262862-2263383 522_na     173_aa hypothetical protein
2039 CP073350.1 GCA_018141745.1_02039 CDS open 2263392-2263901 510_na     169_aa ybaK Cys-tRNA(Pro)Cys-tRNA(Cys) deacylase YbaK
2040 CP073350.1 GCA_018141745.1_02040 CDS open 2263908-2266487 2580_na     859_aa hypothetical protein
2041 CP073350.1 GCA_018141745.1_02041 CDS open 2267057-2267692 636_na     211_aa hypothetical protein
2042 CP073350.1 GCA_018141745.1_02042 CDS open 2267736-2268155 420_na     139_aa hypothetical protein
2043 CP073350.1 GCA_018141745.1_02043 CDS open 2268182-2270695 2514_na     837_aa priA primosomal protein N
2044 CP073350.1 GCA_018141745.1_02044 CDS open 2270729-2272201 1473_na     490_aa gltD Glutamate synthase [NADPH] small chain
2045 CP073350.1 GCA_018141745.1_02045 CDS open 2272224-2273015 792_na     263_aa Dihydroorotate dehydrogenase B (NAD(+))%2C electron transfer subunit
2046 CP073350.1 GCA_018141745.1_02046 CDS open 2273216-2273893 678_na     225_aa trmD tRNA (guanine-N(1)-)-methyltransferase
2047 CP073350.1 GCA_018141745.1_02047 CDS open 2273925-2274836 912_na     303_aa hypothetical protein
2048 CP073350.1 GCA_018141745.1_02048 CDS open 2274905-2275126 222_na     73_aa hypothetical protein
2049 CP073350.1 GCA_018141745.1_02049 CDS open 2275123-2275572 450_na     149_aa hypothetical protein
2050 CP073350.1 GCA_018141745.1_02050 CDS open 2275712-2276188 477_na     158_aa hypothetical protein
2051 CP073350.1 GCA_018141745.1_02051 CDS open 2276549-2277280 732_na     243_aa hypothetical protein
2052 CP073350.1 GCA_018141745.1_02052 CDS open 2277412-2278929 1518_na     505_aa resA_3 Thiol-disulfide oxidoreductase ResA
2053 CP073350.1 GCA_018141745.1_02053 CDS open 2278965-2279207 243_na     80_aa hypothetical protein
2054 CP073350.1 GCA_018141745.1_02054 CDS open 2279340-2280434 1095_na     364_aa GTP cyclohydrolase 1 type 2
2055 CP073350.1 GCA_018141745.1_02055 CDS open 2280452-2281207 756_na     251_aa hypothetical protein
2056 CP073350.1 GCA_018141745.1_02056 CDS open 2281472-2282836 1365_na     454_aa tilS tRNA(Ile)-lysidine synthase
2057 CP073350.1 GCA_018141745.1_02057 CDS open 2282831-2285116 2286_na     761_aa recD2_2 ATP-dependent RecD-like DNA helicase
2058 CP073350.1 GCA_018141745.1_02058 CDS open 2285207-2285557 351_na     116_aa hypothetical protein
2059 CP073350.1 GCA_018141745.1_02059 CDS open 2285600-2285977 378_na     125_aa hypothetical protein
2060 CP073350.1 GCA_018141745.1_02060 CDS open 2286233-2286508 276_na     91_aa hypothetical protein
2061 CP073350.1 GCA_018141745.1_02061 CDS open 2286736-2287629 894_na     297_aa dapA 4-hydroxy-tetrahydrodipicolinate synthase
2062 CP073350.1 GCA_018141745.1_02062 CDS open 2287658-2288311 654_na     217_aa bioD1 ATP-dependent dethiobiotin synthetase BioD 1
2063 CP073350.1 GCA_018141745.1_02063 CDS open 2288417-2289088 672_na     223_aa yiaD putative lipoprotein YiaD
2064 CP073350.1 GCA_018141745.1_02064 CDS open 2289154-2290134 981_na     326_aa pyrD_2 Dihydroorotate dehydrogenase B (NAD(+))%2C catalytic subunit
2065 CP073350.1 tRNA open 2290664-2290737 tRNA-Lys(ctt)
2066 CP073350.1 GCA_018141745.1_02066 CDS open 2291093-2291275 183_na     60_aa hypothetical protein
2067 CP073350.1 GCA_018141745.1_02067 CDS open 2291511-2292596 1086_na     361_aa IS5 family transposase ISPg8
2068 CP073350.1 GCA_018141745.1_02068 CDS open 2292810-2293604 795_na     264_aa thyA Thymidylate synthase
2069 CP073350.1 GCA_018141745.1_02069 CDS open 2293650-2294138 489_na     162_aa dfrA Dihydrofolate reductase
2070 CP073350.1 GCA_018141745.1_02070 CDS open 2294199-2295563 1365_na     454_aa hisS Histidine--tRNA ligase
2071 CP073350.1 GCA_018141745.1_02071 CDS open 2296239-2297252 1014_na     337_aa rlmN Dual-specificity RNA methyltransferase RlmN
2072 CP073350.1 GCA_018141745.1_02072 CDS open 2297343-2298398 1056_na     351_aa hypothetical protein
2073 CP073350.1 GCA_018141745.1_02073 CDS open 2298442-2299539 1098_na     365_aa pdxA2 D-erythronate 4-phosphate dehydrogenase
2074 CP073350.1 GCA_018141745.1_02074 CDS open 2299561-2300019 459_na     152_aa tagD Glycerol-3-phosphate cytidylyltransferase
2075 CP073350.1 GCA_018141745.1_02075 CDS open 2300025-2300756 732_na     243_aa fabG_2 3-oxoacyl-[acyl-carrier-protein] reductase FabG
2076 CP073350.1 GCA_018141745.1_02076 CDS open 2300768-2301694 927_na     308_aa hypothetical protein
2077 CP073350.1 GCA_018141745.1_02077 CDS open 2301739-2302599 861_na     286_aa hypothetical protein
2078 CP073350.1 GCA_018141745.1_02078 CDS open 2302596-2305820 3225_na     1074_aa recB RecBCD enzyme subunit RecB
2079 CP073350.1 rRNA open 2306142-2306247 5S ribosomal RNA
2080 CP073350.1 rRNA open 2306347-2309232 23S ribosomal RNA
2081 CP073350.1 tRNA open 2309345-2309419 tRNA-Ala(tgc)
2082 CP073350.1 tRNA open 2309420-2309494 tRNA-Ile(gat)
2083 CP073350.1 rRNA open 2310001-2311528 16S ribosomal RNA
2084 CP073350.1 GCA_018141745.1_02084 CDS open 2311869-2312177 309_na     102_aa hypothetical protein
2085 CP073350.1 GCA_018141745.1_02085 CDS open 2312426-2312797 372_na     123_aa IS3 family transposase ISPg5
2086 CP073350.1 GCA_018141745.1_02086 CDS open 2313412-2313792 381_na     126_aa IS3 family transposase ISPg5
2087 CP073350.1 GCA_018141745.1_02087 CDS open 2313914-2314171 258_na     85_aa hypothetical protein
2088 CP073350.1 GCA_018141745.1_02088 CDS open 2314216-2316675 2460_na     819_aa pheT Phenylalanine--tRNA ligase beta subunit
2089 CP073350.1 GCA_018141745.1_02089 CDS open 2316718-2317446 729_na     242_aa putative transcriptional regulatory protein
2090 CP073350.1 GCA_018141745.1_02090 CDS open 2317748-2320423 2676_na     891_aa mutS DNA mismatch repair protein MutS
2091 CP073350.1 GCA_018141745.1_02091 CDS open 2320827-2320946 120_na     39_aa hypothetical protein
2092 CP073350.1 GCA_018141745.1_02092 CDS open 2321341-2322846 1506_na     501_aa hypothetical protein
2093 CP073350.1 GCA_018141745.1_02093 CDS open 2322896-2323891 996_na     331_aa hypothetical protein
2094 CP073350.1 GCA_018141745.1_02094 CDS open 2323894-2325075 1182_na     393_aa hypothetical protein
2095 CP073350.1 GCA_018141745.1_02095 CDS open 2325077-2326351 1275_na     424_aa hypothetical protein
2096 CP073350.1 GCA_018141745.1_02096 CDS open 2326481-2326960 480_na     159_aa dps DNA protection during starvation protein
2097 CP073350.1 GCA_018141745.1_02097 CDS open 2327968-2329185 1218_na     405_aa putative zinc protease
2098 CP073350.1 GCA_018141745.1_02098 CDS open 2329364-2330005 642_na     213_aa kdsD Arabinose 5-phosphate isomerase KdsD
2099 CP073350.1 GCA_018141745.1_02099 CDS open 2330151-2331965 1815_na     604_aa deaD ATP-dependent RNA helicase DeaD
2100 CP073350.1 GCA_018141745.1_02100 CDS open 2331984-2333429 1446_na     481_aa hypothetical protein
2101 CP073350.1 GCA_018141745.1_02101 CDS open 2333429-2334628 1200_na     399_aa sdaB L-serine dehydratase 2
2102 CP073350.1 GCA_018141745.1_02102 CDS open 2334723-2335508 786_na     261_aa hypothetical protein
2103 CP073350.1 GCA_018141745.1_02103 CDS open 2335514-2336416 903_na     300_aa hypothetical protein
2104 CP073350.1 GCA_018141745.1_02104 CDS open 2336478-2338463 1986_na     661_aa hypothetical protein
2105 CP073350.1 GCA_018141745.1_02105 CDS open 2338973-2340274 1302_na     433_aa hypothetical protein
2106 CP073350.1 GCA_018141745.1_02106 CDS open 2340247-2340945 699_na     232_aa hypothetical protein
2107 CP073350.1 GCA_018141745.1_02107 CDS open 2341178-2342119 942_na     313_aa hypothetical protein
2108 CP073350.1 GCA_018141745.1_02108 CDS open 2342148-2343314 1167_na     388_aa purM Phosphoribosylformylglycinamidine cyclo-ligase
2109 CP073350.1 GCA_018141745.1_02109 CDS open 2343339-2344424 1086_na     361_aa prfA Peptide chain release factor 1
2110 CP073350.1 GCA_018141745.1_02110 CDS open 2344441-2345271 831_na     276_aa pyrF Orotidine 5-phosphate decarboxylase
2111 CP073350.1 GCA_018141745.1_02111 CDS open 2345364-2346413 1050_na     349_aa lpxD UDP-3-O-acylglucosamine N-acyltransferase
2112 CP073350.1 GCA_018141745.1_02112 CDS open 2346392-2347780 1389_na     462_aa lpxC UDP-3-O-acyl-N-acetylglucosamine deacetylase
2113 CP073350.1 GCA_018141745.1_02113 CDS open 2347780-2348571 792_na     263_aa lpxA Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
2114 CP073350.1 GCA_018141745.1_02114 CDS open 2348549-2350090 1542_na     513_aa nnr Bifunctional NAD(P)H-hydrate repair enzyme Nnr
2115 CP073350.1 GCA_018141745.1_02115 CDS open 2350162-2350581 420_na     139_aa hypothetical protein
2116 CP073350.1 GCA_018141745.1_02116 CDS open 2351118-2352296 1179_na     392_aa mdtA_2 Multidrug resistance protein MdtA
2117 CP073350.1 GCA_018141745.1_02117 CDS open 2352316-2355435 3120_na     1039_aa czcA Cobalt-zinc-cadmium resistance protein CzcA
2118 CP073350.1 GCA_018141745.1_02118 CDS open 2355452-2356630 1179_na     392_aa hypothetical protein
2119 CP073350.1 GCA_018141745.1_02119 CDS open 2356728-2358770 2043_na     680_aa recD2_3 ATP-dependent RecD-like DNA helicase
2120 CP073350.1 GCA_018141745.1_02120 CDS open 2358775-2360313 1539_na     512_aa hypothetical protein
2121 CP073350.1 GCA_018141745.1_02121 CDS open 2360360-2360542 183_na     60_aa hypothetical protein
2122 CP073350.1 GCA_018141745.1_02122 CDS open 2360549-2360932 384_na     127_aa hypothetical protein
2123 CP073350.1 GCA_018141745.1_02123 CDS open 2360946-2361539 594_na     197_aa nadD Nicotinate-nucleotide adenylyltransferase
2124 CP073350.1 GCA_018141745.1_02124 CDS open 2361539-2362723 1185_na     394_aa pncB2 Nicotinate phosphoribosyltransferase 2
2125 CP073350.1 GCA_018141745.1_02125 CDS open 2362756-2364456 1701_na     566_aa hypothetical protein
2126 CP073350.1 GCA_018141745.1_02126 CDS open 2364587-2365642 1056_na     351_aa hypothetical protein
2127 CP073350.1 GCA_018141745.1_02127 CDS open 2365639-2367393 1755_na     584_aa recJ Single-stranded-DNA-specific exonuclease RecJ
2128 CP073350.1 GCA_018141745.1_02128 CDS open 2367853-2369040 1188_na     395_aa sasA_4 Adaptive-response sensory-kinase SasA
2129 CP073350.1 GCA_018141745.1_02129 CDS open 2369319-2370404 1086_na     361_aa IS5 family transposase ISPg8
2130 CP073350.1 GCA_018141745.1_02130 CDS open 2370681-2371478 798_na     265_aa loiP Metalloprotease LoiP
2131 CP073350.1 GCA_018141745.1_02131 CDS open 2371689-2372570 882_na     293_aa hypothetical protein
2132 CP073350.1 GCA_018141745.1_02132 CDS open 2372812-2374749 1938_na     645_aa yheS putative ABC transporter ATP-binding protein YheS
2133 CP073350.1 GCA_018141745.1_02133 CDS open 2374746-2376833 2088_na     695_aa cpoB_3 Cell division coordinator CpoB
2134 CP073350.1 GCA_018141745.1_02134 CDS open 2376869-2377546 678_na     225_aa def Peptide deformylase
2135 CP073350.1 GCA_018141745.1_02135 CDS open 2377543-2378181 639_na     212_aa yqgF Putative pre-16S rRNA nuclease
2136 CP073350.1 GCA_018141745.1_02136 CDS open 2378461-2384184 5724_na     1907_aa hypothetical protein
2137 CP073350.1 GCA_018141745.1_02137 CDS open 2384198-2385142 945_na     314_aa panE 2-dehydropantoate 2-reductase
2138 CP073350.1 GCA_018141745.1_02138 CDS open 2385277-2386893 1617_na     538_aa ybiT putative ABC transporter ATP-binding protein YbiT
2139 CP073350.1 GCA_018141745.1_02139 CDS open 2387169-2388188 1020_na     339_aa hypothetical protein
2140 CP073350.1 GCA_018141745.1_02140 CDS open 2388359-2388613 255_na     84_aa hypothetical protein
2141 CP073350.1 GCA_018141745.1_02141 CDS open 2388702-2388956 255_na     84_aa hypothetical protein
2142 CP073350.1 GCA_018141745.1_02142 CDS open 2388980-2391838 2859_na     952_aa uvrA_2 UvrABC system protein A
2143 CP073350.1 tRNA open 2391962-2392046 tRNA-Leu(gag)
2144 CP073350.1 tRNA open 2392078-2392162 tRNA-Leu(cag)
2145 CP073350.1 tRNA open 2392250-2392325 tRNA-Gly(gcc)
2146 CP073350.1 GCA_018141745.1_02146 CDS open 2392879-2393061 183_na     60_aa hypothetical protein
2147 CP073350.1 GCA_018141745.1_02147 CDS open 2393332-2394606 1275_na     424_aa hypothetical protein
2148 CP073350.1 GCA_018141745.1_02148 CDS open 2394641-2395726 1086_na     361_aa rfbM Mannose-1-phosphate guanylyltransferase RfbM
2149 CP073350.1 GCA_018141745.1_02149 CDS open 2395830-2397530 1701_na     566_aa hypothetical protein
2150 CP073350.1 GCA_018141745.1_02150 CDS open 2397706-2399607 1902_na     633_aa dxs 1-deoxy-D-xylulose-5-phosphate synthase
2151 CP073350.1 GCA_018141745.1_02151 CDS open 2399661-2401001 1341_na     446_aa trkA Trk system potassium uptake protein TrkA
2152 CP073350.1 GCA_018141745.1_02152 CDS open 2401028-2402491 1464_na     487_aa trkH Trk system potassium uptake protein TrkH
2153 CP073350.1 tRNA open 2402682-2402753 tRNA-Cys(gca)
2154 CP073350.1 GCA_018141745.1_02154 CDS open 2403569-2404903 1335_na     444_aa mtaB Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB
2155 CP073350.1 GCA_018141745.1_02155 CDS open 2404900-2405817 918_na     305_aa lpxP Lipid A biosynthesis palmitoleoyltransferase
2156 CP073350.1 GCA_018141745.1_02156 CDS open 2405814-2406824 1011_na     336_aa hypothetical protein
2157 CP073350.1 GCA_018141745.1_02157 CDS open 2406967-2407563 597_na     198_aa hypothetical protein
2158 CP073350.1 GCA_018141745.1_02158 CDS open 2407556-2407852 297_na     98_aa hypothetical protein
2159 CP073350.1 GCA_018141745.1_02159 CDS open 2407932-2410154 2223_na     740_aa hypothetical protein
2160 CP073350.1 GCA_018141745.1_02160 CDS open 2410151-2410807 657_na     218_aa hypothetical protein