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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Porphyromonas gingivalis (GCA_018141765.1)

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PROKKA Annotations for GCA_018141765.1
Genome Selected: Porphyromonas gingivalis
ContigsBases CDSrRNA tmRNAtRNA
1 2411440 2077 12 1 52
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Annotation Table [page:5]    |    Number of Records Found: 2158 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 CP073349.1 GCA_018141765.1_02001 CDS open 2217667-2218674 1008_na     335_aa fabH 3-oxoacyl-[acyl-carrier-protein] synthase 3
2002 CP073349.1 GCA_018141765.1_02002 CDS open 2218753-2219652 900_na     299_aa era GTPase Era
2003 CP073349.1 GCA_018141765.1_02003 CDS open 2219715-2221028 1314_na     437_aa der_3 GTPase Der
2004 CP073349.1 GCA_018141765.1_02004 CDS open 2221079-2224378 3300_na     1099_aa hypothetical protein
2005 CP073349.1 GCA_018141765.1_02005 CDS open 2224379-2225026 648_na     215_aa pgdA Peptidoglycan-N-acetylglucosamine deacetylase
2006 CP073349.1 GCA_018141765.1_02006 CDS open 2225052-2225738 687_na     228_aa mnmC tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC
2007 CP073349.1 GCA_018141765.1_02007 CDS open 2225937-2226518 582_na     193_aa xpt Xanthine phosphoribosyltransferase
2008 CP073349.1 GCA_018141765.1_02008 CDS open 2226555-2227892 1338_na     445_aa xanP Xanthine permease XanP
2009 CP073349.1 GCA_018141765.1_02009 CDS open 2228054-2228725 672_na     223_aa hypothetical protein
2010 CP073349.1 GCA_018141765.1_02010 CDS open 2228785-2230290 1506_na     501_aa hypothetical protein
2011 CP073349.1 GCA_018141765.1_02011 CDS open 2230895-2231470 576_na     191_aa hypothetical protein
2012 CP073349.1 tRNA open 2231752-2231825 tRNA-Pro(cgg)
2013 CP073349.1 GCA_018141765.1_02013 CDS open 2231946-2232131 186_na     61_aa hypothetical protein
2014 CP073349.1 GCA_018141765.1_02014 CDS open 2232158-2233057 900_na     299_aa hypothetical protein
2015 CP073349.1 GCA_018141765.1_02015 CDS open 2233094-2233840 747_na     248_aa rsmE Ribosomal RNA small subunit methyltransferase E
2016 CP073349.1 GCA_018141765.1_02016 CDS open 2234188-2235189 1002_na     333_aa hypothetical protein
2017 CP073349.1 GCA_018141765.1_02017 CDS open 2235213-2235638 426_na     141_aa sufE Cysteine desulfuration protein SufE
2018 CP073349.1 GCA_018141765.1_02018 CDS open 2235642-2237039 1398_na     465_aa hemY Protoporphyrinogen oxidase
2019 CP073349.1 GCA_018141765.1_02019 CDS open 2237939-2238838 900_na     299_aa hypothetical protein
2020 CP073349.1 GCA_018141765.1_02020 CDS open 2238835-2239986 1152_na     383_aa lpxB Lipid-A-disaccharide synthase
2021 CP073349.1 GCA_018141765.1_02021 CDS open 2240023-2240793 771_na     256_aa surE 5-nucleotidase SurE
2022 CP073349.1 GCA_018141765.1_02022 CDS open 2240790-2241347 558_na     185_aa hypothetical protein
2023 CP073349.1 GCA_018141765.1_02023 CDS open 2241344-2242960 1617_na     538_aa glyQS Glycine--tRNA ligase
2024 CP073349.1 GCA_018141765.1_02024 CDS open 2243351-2244790 1440_na     479_aa hypothetical protein
2025 CP073349.1 GCA_018141765.1_02025 CDS open 2244835-2245428 594_na     197_aa hypothetical protein
2026 CP073349.1 GCA_018141765.1_02026 CDS open 2245820-2246176 357_na     118_aa hypothetical protein
2027 CP073349.1 GCA_018141765.1_02027 CDS open 2246122-2246901 780_na     259_aa IS5 family transposase ISPg8
2028 CP073349.1 GCA_018141765.1_02028 CDS open 2247146-2247451 306_na     101_aa hypothetical protein
2029 CP073349.1 GCA_018141765.1_02029 CDS open 2247698-2248600 903_na     300_aa IS982 family transposase IS195
2030 CP073349.1 GCA_018141765.1_02030 CDS open 2248882-2250813 1932_na     643_aa hypothetical protein
2031 CP073349.1 GCA_018141765.1_02031 CDS open 2250817-2253360 2544_na     847_aa hypothetical protein
2032 CP073349.1 GCA_018141765.1_02032 CDS open 2253526-2254467 942_na     313_aa fmt Methionyl-tRNA formyltransferase
2033 CP073349.1 tRNA open 2254723-2254797 tRNA-Asp(gtc)
2034 CP073349.1 GCA_018141765.1_02034 CDS open 2255044-2260152 5109_na     1702_aa kgp_3 Lys-gingipain HG66
2035 CP073349.1 GCA_018141765.1_02035 CDS open 2260651-2261736 1086_na     361_aa IS5 family transposase ISPg8
2036 CP073349.1 GCA_018141765.1_02036 CDS open 2262265-2262798 534_na     177_aa pspB Putative phosphoserine phosphatase 2
2037 CP073349.1 GCA_018141765.1_02037 CDS open 2262830-2263351 522_na     173_aa hypothetical protein
2038 CP073349.1 GCA_018141765.1_02038 CDS open 2263360-2263869 510_na     169_aa ybaK Cys-tRNA(Pro)Cys-tRNA(Cys) deacylase YbaK
2039 CP073349.1 GCA_018141765.1_02039 CDS open 2263876-2266455 2580_na     859_aa hypothetical protein
2040 CP073349.1 GCA_018141765.1_02040 CDS open 2267025-2267660 636_na     211_aa hypothetical protein
2041 CP073349.1 GCA_018141765.1_02041 CDS open 2267704-2268123 420_na     139_aa hypothetical protein
2042 CP073349.1 GCA_018141765.1_02042 CDS open 2268150-2270663 2514_na     837_aa priA primosomal protein N
2043 CP073349.1 GCA_018141765.1_02043 CDS open 2270697-2272169 1473_na     490_aa gltD Glutamate synthase [NADPH] small chain
2044 CP073349.1 GCA_018141765.1_02044 CDS open 2272192-2272983 792_na     263_aa Dihydroorotate dehydrogenase B (NAD(+))%2C electron transfer subunit
2045 CP073349.1 GCA_018141765.1_02045 CDS open 2273184-2273861 678_na     225_aa trmD tRNA (guanine-N(1)-)-methyltransferase
2046 CP073349.1 GCA_018141765.1_02046 CDS open 2273893-2274804 912_na     303_aa hypothetical protein
2047 CP073349.1 GCA_018141765.1_02047 CDS open 2274873-2275094 222_na     73_aa hypothetical protein
2048 CP073349.1 GCA_018141765.1_02048 CDS open 2275091-2275540 450_na     149_aa hypothetical protein
2049 CP073349.1 GCA_018141765.1_02049 CDS open 2275680-2276156 477_na     158_aa hypothetical protein
2050 CP073349.1 GCA_018141765.1_02050 CDS open 2276517-2277248 732_na     243_aa hypothetical protein
2051 CP073349.1 GCA_018141765.1_02051 CDS open 2277380-2278897 1518_na     505_aa resA_3 Thiol-disulfide oxidoreductase ResA
2052 CP073349.1 GCA_018141765.1_02052 CDS open 2278933-2279175 243_na     80_aa hypothetical protein
2053 CP073349.1 GCA_018141765.1_02053 CDS open 2279308-2280402 1095_na     364_aa GTP cyclohydrolase 1 type 2
2054 CP073349.1 GCA_018141765.1_02054 CDS open 2280420-2281175 756_na     251_aa hypothetical protein
2055 CP073349.1 GCA_018141765.1_02055 CDS open 2281440-2282804 1365_na     454_aa tilS tRNA(Ile)-lysidine synthase
2056 CP073349.1 GCA_018141765.1_02056 CDS open 2282799-2285084 2286_na     761_aa recD2_2 ATP-dependent RecD-like DNA helicase
2057 CP073349.1 GCA_018141765.1_02057 CDS open 2285175-2285525 351_na     116_aa hypothetical protein
2058 CP073349.1 GCA_018141765.1_02058 CDS open 2285568-2285945 378_na     125_aa hypothetical protein
2059 CP073349.1 GCA_018141765.1_02059 CDS open 2286201-2286476 276_na     91_aa hypothetical protein
2060 CP073349.1 GCA_018141765.1_02060 CDS open 2286704-2287597 894_na     297_aa dapA 4-hydroxy-tetrahydrodipicolinate synthase
2061 CP073349.1 GCA_018141765.1_02061 CDS open 2287626-2288279 654_na     217_aa bioD1 ATP-dependent dethiobiotin synthetase BioD 1
2062 CP073349.1 GCA_018141765.1_02062 CDS open 2288385-2289056 672_na     223_aa yiaD putative lipoprotein YiaD
2063 CP073349.1 GCA_018141765.1_02063 CDS open 2289122-2290102 981_na     326_aa pyrD_2 Dihydroorotate dehydrogenase B (NAD(+))%2C catalytic subunit
2064 CP073349.1 tRNA open 2290632-2290705 tRNA-Lys(ctt)
2065 CP073349.1 GCA_018141765.1_02065 CDS open 2291061-2291243 183_na     60_aa hypothetical protein
2066 CP073349.1 GCA_018141765.1_02066 CDS open 2291479-2292357 879_na     292_aa hypothetical protein
2067 CP073349.1 GCA_018141765.1_02067 CDS open 2292775-2293569 795_na     264_aa thyA Thymidylate synthase
2068 CP073349.1 GCA_018141765.1_02068 CDS open 2293615-2294103 489_na     162_aa dfrA Dihydrofolate reductase
2069 CP073349.1 GCA_018141765.1_02069 CDS open 2294164-2295528 1365_na     454_aa hisS Histidine--tRNA ligase
2070 CP073349.1 GCA_018141765.1_02070 CDS open 2296204-2297217 1014_na     337_aa rlmN Dual-specificity RNA methyltransferase RlmN
2071 CP073349.1 GCA_018141765.1_02071 CDS open 2297308-2298363 1056_na     351_aa hypothetical protein
2072 CP073349.1 GCA_018141765.1_02072 CDS open 2298407-2299504 1098_na     365_aa pdxA2 D-erythronate 4-phosphate dehydrogenase
2073 CP073349.1 GCA_018141765.1_02073 CDS open 2299526-2299984 459_na     152_aa tagD Glycerol-3-phosphate cytidylyltransferase
2074 CP073349.1 GCA_018141765.1_02074 CDS open 2299990-2300721 732_na     243_aa fabG_2 3-oxoacyl-[acyl-carrier-protein] reductase FabG
2075 CP073349.1 GCA_018141765.1_02075 CDS open 2300733-2301659 927_na     308_aa hypothetical protein
2076 CP073349.1 GCA_018141765.1_02076 CDS open 2301704-2302564 861_na     286_aa hypothetical protein
2077 CP073349.1 GCA_018141765.1_02077 CDS open 2302561-2305785 3225_na     1074_aa recB RecBCD enzyme subunit RecB
2078 CP073349.1 rRNA open 2306107-2306212 5S ribosomal RNA
2079 CP073349.1 rRNA open 2306312-2309201 23S ribosomal RNA
2080 CP073349.1 tRNA open 2309397-2309470 tRNA-Ile(gat)
2081 CP073349.1 rRNA open 2309970-2311482 16S ribosomal RNA
2082 CP073349.1 GCA_018141765.1_02082 CDS open 2311760-2312131 372_na     123_aa hypothetical protein
2083 CP073349.1 GCA_018141765.1_02083 CDS open 2312577-2313167 591_na     196_aa IS3 family transposase ISPg5
2084 CP073349.1 GCA_018141765.1_02084 CDS open 2313371-2313751 381_na     126_aa IS3 family transposase ISPg5
2085 CP073349.1 GCA_018141765.1_02085 CDS open 2313873-2314130 258_na     85_aa hypothetical protein
2086 CP073349.1 GCA_018141765.1_02086 CDS open 2314175-2316634 2460_na     819_aa pheT Phenylalanine--tRNA ligase beta subunit
2087 CP073349.1 GCA_018141765.1_02087 CDS open 2316677-2317405 729_na     242_aa putative transcriptional regulatory protein
2088 CP073349.1 GCA_018141765.1_02088 CDS open 2317707-2320382 2676_na     891_aa mutS DNA mismatch repair protein MutS
2089 CP073349.1 GCA_018141765.1_02089 CDS open 2320786-2320905 120_na     39_aa hypothetical protein
2090 CP073349.1 GCA_018141765.1_02090 CDS open 2321300-2322805 1506_na     501_aa hypothetical protein
2091 CP073349.1 GCA_018141765.1_02091 CDS open 2322855-2323850 996_na     331_aa hypothetical protein
2092 CP073349.1 GCA_018141765.1_02092 CDS open 2323853-2325034 1182_na     393_aa hypothetical protein
2093 CP073349.1 GCA_018141765.1_02093 CDS open 2325036-2326310 1275_na     424_aa hypothetical protein
2094 CP073349.1 GCA_018141765.1_02094 CDS open 2326440-2326919 480_na     159_aa dps DNA protection during starvation protein
2095 CP073349.1 GCA_018141765.1_02095 CDS open 2327927-2329144 1218_na     405_aa putative zinc protease
2096 CP073349.1 GCA_018141765.1_02096 CDS open 2329323-2329964 642_na     213_aa kdsD Arabinose 5-phosphate isomerase KdsD
2097 CP073349.1 GCA_018141765.1_02097 CDS open 2330110-2331924 1815_na     604_aa deaD ATP-dependent RNA helicase DeaD
2098 CP073349.1 GCA_018141765.1_02098 CDS open 2331943-2333388 1446_na     481_aa hypothetical protein
2099 CP073349.1 GCA_018141765.1_02099 CDS open 2333388-2334587 1200_na     399_aa sdaB L-serine dehydratase 2
2100 CP073349.1 GCA_018141765.1_02100 CDS open 2334682-2335467 786_na     261_aa hypothetical protein
2101 CP073349.1 GCA_018141765.1_02101 CDS open 2335473-2336375 903_na     300_aa hypothetical protein
2102 CP073349.1 GCA_018141765.1_02102 CDS open 2336437-2338422 1986_na     661_aa hypothetical protein
2103 CP073349.1 GCA_018141765.1_02103 CDS open 2338932-2340233 1302_na     433_aa hypothetical protein
2104 CP073349.1 GCA_018141765.1_02104 CDS open 2340206-2340904 699_na     232_aa hypothetical protein
2105 CP073349.1 GCA_018141765.1_02105 CDS open 2341137-2342078 942_na     313_aa hypothetical protein
2106 CP073349.1 GCA_018141765.1_02106 CDS open 2342107-2343273 1167_na     388_aa purM Phosphoribosylformylglycinamidine cyclo-ligase
2107 CP073349.1 GCA_018141765.1_02107 CDS open 2343298-2344383 1086_na     361_aa prfA Peptide chain release factor 1
2108 CP073349.1 GCA_018141765.1_02108 CDS open 2344400-2345230 831_na     276_aa pyrF Orotidine 5-phosphate decarboxylase
2109 CP073349.1 GCA_018141765.1_02109 CDS open 2345323-2346372 1050_na     349_aa lpxD UDP-3-O-acylglucosamine N-acyltransferase
2110 CP073349.1 GCA_018141765.1_02110 CDS open 2346351-2347739 1389_na     462_aa lpxC UDP-3-O-acyl-N-acetylglucosamine deacetylase
2111 CP073349.1 GCA_018141765.1_02111 CDS open 2347739-2348530 792_na     263_aa lpxA Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
2112 CP073349.1 GCA_018141765.1_02112 CDS open 2348508-2350049 1542_na     513_aa nnr Bifunctional NAD(P)H-hydrate repair enzyme Nnr
2113 CP073349.1 GCA_018141765.1_02113 CDS open 2350121-2350540 420_na     139_aa hypothetical protein
2114 CP073349.1 GCA_018141765.1_02114 CDS open 2351077-2352255 1179_na     392_aa mdtA_2 Multidrug resistance protein MdtA
2115 CP073349.1 GCA_018141765.1_02115 CDS open 2352275-2355394 3120_na     1039_aa czcA Cobalt-zinc-cadmium resistance protein CzcA
2116 CP073349.1 GCA_018141765.1_02116 CDS open 2355411-2356589 1179_na     392_aa hypothetical protein
2117 CP073349.1 GCA_018141765.1_02117 CDS open 2356687-2358729 2043_na     680_aa recD2_3 ATP-dependent RecD-like DNA helicase
2118 CP073349.1 GCA_018141765.1_02118 CDS open 2358734-2360272 1539_na     512_aa hypothetical protein
2119 CP073349.1 GCA_018141765.1_02119 CDS open 2360319-2360501 183_na     60_aa hypothetical protein
2120 CP073349.1 GCA_018141765.1_02120 CDS open 2360508-2360891 384_na     127_aa hypothetical protein
2121 CP073349.1 GCA_018141765.1_02121 CDS open 2360905-2361498 594_na     197_aa nadD Nicotinate-nucleotide adenylyltransferase
2122 CP073349.1 GCA_018141765.1_02122 CDS open 2361498-2362682 1185_na     394_aa pncB2 Nicotinate phosphoribosyltransferase 2
2123 CP073349.1 GCA_018141765.1_02123 CDS open 2362715-2364415 1701_na     566_aa hypothetical protein
2124 CP073349.1 GCA_018141765.1_02124 CDS open 2364546-2365601 1056_na     351_aa hypothetical protein
2125 CP073349.1 GCA_018141765.1_02125 CDS open 2365598-2367352 1755_na     584_aa recJ Single-stranded-DNA-specific exonuclease RecJ
2126 CP073349.1 GCA_018141765.1_02126 CDS open 2367812-2368999 1188_na     395_aa sasA_4 Adaptive-response sensory-kinase SasA
2127 CP073349.1 GCA_018141765.1_02127 CDS open 2369278-2370363 1086_na     361_aa IS5 family transposase ISPg8
2128 CP073349.1 GCA_018141765.1_02128 CDS open 2370640-2371437 798_na     265_aa loiP Metalloprotease LoiP
2129 CP073349.1 GCA_018141765.1_02129 CDS open 2371648-2372529 882_na     293_aa hypothetical protein
2130 CP073349.1 GCA_018141765.1_02130 CDS open 2372771-2374708 1938_na     645_aa yheS putative ABC transporter ATP-binding protein YheS
2131 CP073349.1 GCA_018141765.1_02131 CDS open 2374705-2376792 2088_na     695_aa cpoB_3 Cell division coordinator CpoB
2132 CP073349.1 GCA_018141765.1_02132 CDS open 2376828-2377505 678_na     225_aa def Peptide deformylase
2133 CP073349.1 GCA_018141765.1_02133 CDS open 2377502-2378140 639_na     212_aa yqgF Putative pre-16S rRNA nuclease
2134 CP073349.1 GCA_018141765.1_02134 CDS open 2378420-2384143 5724_na     1907_aa hypothetical protein
2135 CP073349.1 GCA_018141765.1_02135 CDS open 2384157-2385101 945_na     314_aa panE 2-dehydropantoate 2-reductase
2136 CP073349.1 GCA_018141765.1_02136 CDS open 2385236-2386852 1617_na     538_aa ybiT putative ABC transporter ATP-binding protein YbiT
2137 CP073349.1 GCA_018141765.1_02137 CDS open 2387128-2388147 1020_na     339_aa hypothetical protein
2138 CP073349.1 GCA_018141765.1_02138 CDS open 2388318-2388572 255_na     84_aa hypothetical protein
2139 CP073349.1 GCA_018141765.1_02139 CDS open 2388661-2388915 255_na     84_aa hypothetical protein
2140 CP073349.1 GCA_018141765.1_02140 CDS open 2388939-2391797 2859_na     952_aa uvrA_2 UvrABC system protein A
2141 CP073349.1 tRNA open 2391921-2392005 tRNA-Leu(gag)
2142 CP073349.1 tRNA open 2392037-2392121 tRNA-Leu(cag)
2143 CP073349.1 tRNA open 2392209-2392284 tRNA-Gly(gcc)
2144 CP073349.1 GCA_018141765.1_02144 CDS open 2392838-2393020 183_na     60_aa hypothetical protein
2145 CP073349.1 GCA_018141765.1_02145 CDS open 2393291-2394565 1275_na     424_aa hypothetical protein
2146 CP073349.1 GCA_018141765.1_02146 CDS open 2394600-2395685 1086_na     361_aa rfbM Mannose-1-phosphate guanylyltransferase RfbM
2147 CP073349.1 GCA_018141765.1_02147 CDS open 2395789-2397489 1701_na     566_aa hypothetical protein
2148 CP073349.1 GCA_018141765.1_02148 CDS open 2397665-2399566 1902_na     633_aa dxs 1-deoxy-D-xylulose-5-phosphate synthase
2149 CP073349.1 GCA_018141765.1_02149 CDS open 2399620-2400960 1341_na     446_aa trkA Trk system potassium uptake protein TrkA
2150 CP073349.1 GCA_018141765.1_02150 CDS open 2400987-2402450 1464_na     487_aa trkH Trk system potassium uptake protein TrkH
2151 CP073349.1 tRNA open 2402641-2402712 tRNA-Cys(gca)
2152 CP073349.1 GCA_018141765.1_02152 CDS open 2403528-2404862 1335_na     444_aa mtaB Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB
2153 CP073349.1 GCA_018141765.1_02153 CDS open 2404859-2405776 918_na     305_aa lpxP Lipid A biosynthesis palmitoleoyltransferase
2154 CP073349.1 GCA_018141765.1_02154 CDS open 2405773-2406783 1011_na     336_aa hypothetical protein
2155 CP073349.1 GCA_018141765.1_02155 CDS open 2406926-2407522 597_na     198_aa hypothetical protein
2156 CP073349.1 GCA_018141765.1_02156 CDS open 2407515-2407811 297_na     98_aa hypothetical protein
2157 CP073349.1 GCA_018141765.1_02157 CDS open 2407891-2410113 2223_na     740_aa hypothetical protein
2158 CP073349.1 GCA_018141765.1_02158 CDS open 2410110-2410766 657_na     218_aa hypothetical protein