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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Bifidobacterium animalis (GCA_023704215.1)

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PROKKA Annotations for GCA_023704215.1
Genome Selected: Bifidobacterium animalis
ContigsBases CDSrRNA tmRNAtRNA
1 1944140 1561 12 1 53
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Annotation Table [page:4]    |    Number of Records Found: 1636 [4 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
1501 CP094969.1 GCA_023704215.1_01501 CDS open 1795295-1796128 834_na     277_aa rpsC 30S ribosomal protein S3
1502 CP094969.1 GCA_023704215.1_01502 CDS open 1796136-1796555 420_na     139_aa rplP 50S ribosomal protein L16
1503 CP094969.1 GCA_023704215.1_01503 CDS open 1796555-1796803 249_na     82_aa rpmC 50S ribosomal protein L29
1504 CP094969.1 GCA_023704215.1_01504 CDS open 1796813-1797073 261_na     86_aa rpsQ 30S ribosomal protein S17
1505 CP094969.1 GCA_023704215.1_01505 CDS open 1797162-1797530 369_na     122_aa rplN 50S ribosomal protein L14
1506 CP094969.1 GCA_023704215.1_01506 CDS open 1797532-1797867 336_na     111_aa rplX 50S ribosomal protein L24
1507 CP094969.1 GCA_023704215.1_01507 CDS open 1797864-1798448 585_na     194_aa rplE 50S ribosomal protein L5
1508 CP094969.1 GCA_023704215.1_01508 CDS open 1798450-1798635 186_na     61_aa rpsZ 30S ribosomal protein S14 type Z
1509 CP094969.1 GCA_023704215.1_01509 CDS open 1798723-1799121 399_na     132_aa rpsH 30S ribosomal protein S8
1510 CP094969.1 GCA_023704215.1_01510 CDS open 1799138-1799677 540_na     179_aa rplF 50S ribosomal protein L6
1511 CP094969.1 GCA_023704215.1_01511 CDS open 1799679-1800050 372_na     123_aa rplR 50S ribosomal protein L18
1512 CP094969.1 GCA_023704215.1_01512 CDS open 1800047-1800778 732_na     243_aa hypothetical protein
1513 CP094969.1 GCA_023704215.1_01513 CDS open 1800778-1800960 183_na     60_aa rpmD 50S ribosomal protein L30
1514 CP094969.1 GCA_023704215.1_01514 CDS open 1800963-1801421 459_na     152_aa rplO 50S ribosomal protein L15
1515 CP094969.1 GCA_023704215.1_01515 CDS open 1801659-1803008 1350_na     449_aa secY Protein translocase subunit SecY
1516 CP094969.1 GCA_023704215.1_01516 CDS open 1803181-1803753 573_na     190_aa adk Adenylate kinase
1517 CP094969.1 GCA_023704215.1_01517 CDS open 1804002-1804220 219_na     72_aa infA Translation initiation factor IF-1
1518 CP094969.1 GCA_023704215.1_01518 CDS open 1804259-1804372 114_na     37_aa rpmJ 50S ribosomal protein L36
1519 CP094969.1 GCA_023704215.1_01519 CDS open 1804511-1804888 378_na     125_aa rpsM 30S ribosomal protein S13
1520 CP094969.1 GCA_023704215.1_01520 CDS open 1804965-1805363 399_na     132_aa rpsK 30S ribosomal protein S11
1521 CP094969.1 GCA_023704215.1_01521 CDS open 1805442-1806437 996_na     331_aa rpoA DNA-directed RNA polymerase subunit alpha
1522 CP094969.1 GCA_023704215.1_01522 CDS open 1806522-1806968 447_na     148_aa rplQ 50S ribosomal protein L17
1523 CP094969.1 GCA_023704215.1_01523 CDS open 1807190-1807966 777_na     258_aa truA tRNA pseudouridine synthase A
1524 CP094969.1 tRNA open 1808158-1808245 tRNA-Ser(cga)
1525 CP094969.1 GCA_023704215.1_01525 CDS open 1808345-1809256 912_na     303_aa hypothetical protein
1526 CP094969.1 GCA_023704215.1_01526 CDS open 1809369-1810445 1077_na     358_aa nusA Transcription terminationantitermination protein NusA
1527 CP094969.1 GCA_023704215.1_01527 CDS open 1810655-1813489 2835_na     944_aa infB Translation initiation factor IF-2
1528 CP094969.1 GCA_023704215.1_01528 CDS open 1813643-1814296 654_na     217_aa rbfA Ribosome-binding factor A
1529 CP094969.1 GCA_023704215.1_01529 CDS open 1814300-1815352 1053_na     350_aa truB tRNA pseudouridine synthase B
1530 CP094969.1 GCA_023704215.1_01530 CDS open 1815360-1816646 1287_na     428_aa ribF Bifunctional riboflavin kinaseFMN adenylyltransferase
1531 CP094969.1 GCA_023704215.1_01531 CDS open 1816658-1818133 1476_na     491_aa radA DNA repair protein RadA
1532 CP094969.1 GCA_023704215.1_01532 CDS open 1818257-1818937 681_na     226_aa hypothetical protein
1533 CP094969.1 GCA_023704215.1_01533 CDS open 1819015-1819104 90_na     29_aa hypothetical protein
1534 CP094969.1 GCA_023704215.1_01534 CDS open 1819270-1819971 702_na     233_aa rpiA Ribose-5-phosphate isomerase A
1535 CP094969.1 GCA_023704215.1_01535 CDS open 1820061-1821050 990_na     329_aa rnhA Ribonuclease H
1536 CP094969.1 tRNA open 1821845-1821933 tRNA-Ser(tga)
1537 CP094969.1 GCA_023704215.1_01537 CDS open 1822278-1823564 1287_na     428_aa serS Serine--tRNA ligase
1538 CP094969.1 GCA_023704215.1_01538 CDS open 1823736-1824893 1158_na     385_aa yegS lipid kinase YegS
1539 CP094969.1 GCA_023704215.1_01539 CDS open 1825053-1826729 1677_na     558_aa pgm Phosphoglucomutase
1540 CP094969.1 GCA_023704215.1_01540 CDS open 1826851-1828398 1548_na     515_aa hypothetical protein
1541 CP094969.1 GCA_023704215.1_01541 CDS open 1828501-1829121 621_na     206_aa hypothetical protein
1542 CP094969.1 GCA_023704215.1_01542 CDS open 1829151-1831283 2133_na     710_aa hypothetical protein
1543 CP094969.1 GCA_023704215.1_01543 CDS open 1831338-1832048 711_na     236_aa liaR_2 Transcriptional regulatory protein LiaR
1544 CP094969.1 GCA_023704215.1_01544 CDS open 1832341-1833801 1461_na     486_aa hypothetical protein
1545 CP094969.1 GCA_023704215.1_01545 CDS open 1833879-1836002 2124_na     707_aa hypothetical protein
1546 CP094969.1 GCA_023704215.1_01546 CDS open 1836019-1836663 645_na     214_aa hypothetical protein
1547 CP094969.1 GCA_023704215.1_01547 CDS open 1836954-1838153 1200_na     399_aa metC Cystathionine beta-lyase
1548 CP094969.1 GCA_023704215.1_01548 CDS open 1838170-1838901 732_na     243_aa mdeA L-methionine gamma-lyase
1549 CP094969.1 GCA_023704215.1_01549 CDS open 1838877-1839074 198_na     65_aa O-acetyl-L-homoserine sulfhydrylase
1550 CP094969.1 tRNA open 1839140-1839214 tRNA-Pro(cgg)
1551 CP094969.1 GCA_023704215.1_01551 CDS open 1839288-1841105 1818_na     605_aa lysS1 Lysine--tRNA ligase 1
1552 CP094969.1 GCA_023704215.1_01552 CDS open 1841256-1842317 1062_na     353_aa hypothetical protein
1553 CP094969.1 GCA_023704215.1_01553 CDS open 1843026-1844438 1413_na     470_aa hypothetical protein
1554 CP094969.1 GCA_023704215.1_01554 CDS open 1844649-1846007 1359_na     452_aa pepC Aminopeptidase C
1555 CP094969.1 GCA_023704215.1_01555 CDS open 1846111-1848234 2124_na     707_aa hypothetical protein
1556 CP094969.1 GCA_023704215.1_01556 CDS open 1848352-1849845 1494_na     497_aa hypothetical protein
1557 CP094969.1 GCA_023704215.1_01557 CDS open 1850054-1851583 1530_na     509_aa puuP Putrescine importer PuuP
1558 CP094969.1 GCA_023704215.1_01558 CDS open 1851699-1852742 1044_na     347_aa menA 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase
1559 CP094969.1 GCA_023704215.1_01559 CDS open 1852840-1853580 741_na     246_aa gpmA_2 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase
1560 CP094969.1 GCA_023704215.1_01560 CDS open 1854228-1856354 2127_na     708_aa Oleate hydratase
1561 CP094969.1 GCA_023704215.1_01561 CDS open 1856351-1856704 354_na     117_aa hypothetical protein
1562 CP094969.1 GCA_023704215.1_01562 CDS open 1856659-1857348 690_na     229_aa ppsC Phthiocerol synthesis polyketide synthase type I PpsC
1563 CP094969.1 GCA_023704215.1_01563 CDS open 1857541-1858995 1455_na     484_aa hypothetical protein
1564 CP094969.1 GCA_023704215.1_01564 CDS open 1859074-1859337 264_na     87_aa hypothetical protein
1565 CP094969.1 GCA_023704215.1_01565 CDS open 1859246-1860634 1389_na     462_aa sasA_3 Adaptive-response sensory-kinase SasA
1566 CP094969.1 GCA_023704215.1_01566 CDS open 1860804-1861484 681_na     226_aa phoU1 Phosphate-specific transport system accessory protein PhoU
1567 CP094969.1 GCA_023704215.1_01567 CDS open 1861641-1862753 1113_na     370_aa serC Phosphoserine aminotransferase
1568 CP094969.1 GCA_023704215.1_01568 CDS open 1863117-1864142 1026_na     341_aa hypothetical protein
1569 CP094969.1 GCA_023704215.1_01569 CDS open 1864604-1865422 819_na     272_aa hypothetical protein
1570 CP094969.1 GCA_023704215.1_01570 CDS open 1865916-1866971 1056_na     351_aa hypothetical protein
1571 CP094969.1 GCA_023704215.1_01571 CDS open 1867060-1867473 414_na     137_aa putative protein
1572 CP094969.1 GCA_023704215.1_01572 CDS open 1867607-1868479 873_na     290_aa thyA Thymidylate synthase
1573 CP094969.1 GCA_023704215.1_01573 CDS open 1868605-1869288 684_na     227_aa folA Dihydrofolate reductase
1574 CP094969.1 GCA_023704215.1_01574 CDS open 1869323-1869859 537_na     178_aa ptpA putative low molecular weight protein-tyrosine-phosphatase
1575 CP094969.1 GCA_023704215.1_01575 CDS open 1869958-1870968 1011_na     336_aa galE UDP-glucose 4-epimerase
1576 CP094969.1 GCA_023704215.1_01576 CDS open 1871305-1872150 846_na     281_aa trmB tRNA (guanine-N(7)-)-methyltransferase
1577 CP094969.1 tRNA open 1872268-1872340 tRNA-Glu(ttc)
1578 CP094969.1 GCA_023704215.1_01578 CDS open 1872760-1873827 1068_na     355_aa hypothetical protein
1579 CP094969.1 GCA_023704215.1_01579 CDS open 1873974-1874969 996_na     331_aa hypothetical protein
1580 CP094969.1 GCA_023704215.1_01580 CDS open 1875073-1875648 576_na     191_aa hypothetical protein
1581 CP094969.1 GCA_023704215.1_01581 CDS open 1875674-1877221 1548_na     515_aa hypothetical protein
1582 CP094969.1 GCA_023704215.1_01582 CDS open 1877516-1878337 822_na     273_aa hypothetical protein
1583 CP094969.1 GCA_023704215.1_01583 CDS open 1878352-1879872 1521_na     506_aa hypothetical protein
1584 CP094969.1 GCA_023704215.1_01584 CDS open 1879986-1881560 1575_na     524_aa hypothetical protein
1585 CP094969.1 GCA_023704215.1_01585 CDS open 1881562-1882371 810_na     269_aa hypothetical protein
1586 CP094969.1 GCA_023704215.1_01586 CDS open 1882368-1885865 3498_na     1165_aa smc_2 Chromosome partition protein Smc
1587 CP094969.1 GCA_023704215.1_01587 CDS open 1885862-1887082 1221_na     406_aa hypothetical protein
1588 CP094969.1 GCA_023704215.1_01588 CDS open 1887003-1887380 378_na     125_aa hypothetical protein
1589 CP094969.1 GCA_023704215.1_01589 CDS open 1887450-1887812 363_na     120_aa hypothetical protein
1590 CP094969.1 GCA_023704215.1_01590 CDS open 1888085-1889602 1518_na     505_aa lacS Lactose permease
1591 CP094969.1 GCA_023704215.1_01591 CDS open 1889912-1893115 3204_na     1067_aa lacZ Beta-galactosidase
1592 CP094969.1 GCA_023704215.1_01592 CDS open 1893218-1894213 996_na     331_aa lacR_2 HTH-type transcriptional regulator LacR
1593 CP094969.1 GCA_023704215.1_01593 CDS open 1894647-1895255 609_na     202_aa gph_2 Phosphoglycolate phosphatase
1594 CP094969.1 GCA_023704215.1_01594 CDS open 1895382-1895777 396_na     131_aa hypothetical protein
1595 CP094969.1 GCA_023704215.1_01595 CDS open 1895924-1896514 591_na     196_aa hypothetical protein
1596 CP094969.1 GCA_023704215.1_01596 CDS open 1896511-1896684 174_na     57_aa hypothetical protein
1597 CP094969.1 GCA_023704215.1_01597 CDS open 1896694-1897194 501_na     166_aa hypothetical protein
1598 CP094969.1 GCA_023704215.1_01598 CDS open 1897292-1898635 1344_na     447_aa lacE Lactose-binding protein
1599 CP094969.1 GCA_023704215.1_01599 CDS open 1898881-1900968 2088_na     695_aa beta-galIII Beta-galactosidase III
1600 CP094969.1 GCA_023704215.1_01600 CDS open 1901010-1901990 981_na     326_aa araQ_2 L-arabinose transport system permease protein AraQ
1601 CP094969.1 GCA_023704215.1_01601 CDS open 1902010-1902978 969_na     322_aa lacF Lactose transport system permease protein LacF
1602 CP094969.1 GCA_023704215.1_01602 CDS open 1903265-1904263 999_na     332_aa lacI_2 Lactose operon repressor
1603 CP094969.1 tRNA open 1904454-1904528 tRNA-Asp(gtc)
1604 CP094969.1 tRNA open 1904564-1904638 tRNA-Asp(gtc)
1605 CP094969.1 tRNA open 1904665-1904740 tRNA-Phe(gaa)
1606 CP094969.1 GCA_023704215.1_01606 CDS open 1904885-1905910 1026_na     341_aa hypothetical protein
1607 CP094969.1 GCA_023704215.1_01607 CDS open 1906041-1907630 1590_na     529_aa hypothetical protein
1608 CP094969.1 GCA_023704215.1_01608 CDS open 1907630-1908916 1287_na     428_aa hypothetical protein
1609 CP094969.1 GCA_023704215.1_01609 CDS open 1909127-1909999 873_na     290_aa btuD_18 Vitamin B12 import ATP-binding protein BtuD
1610 CP094969.1 GCA_023704215.1_01610 CDS open 1909996-1911717 1722_na     573_aa hypothetical protein
1611 CP094969.1 GCA_023704215.1_01611 CDS open 1911909-1913219 1311_na     436_aa hypothetical protein
1612 CP094969.1 GCA_023704215.1_01612 CDS open 1913264-1914412 1149_na     382_aa tilS tRNA(Ile)-lysidine synthase
1613 CP094969.1 GCA_023704215.1_01613 CDS open 1914381-1914944 564_na     187_aa hpt Hypoxanthine-guanine phosphoribosyltransferase
1614 CP094969.1 GCA_023704215.1_01614 CDS open 1914941-1917037 2097_na     698_aa ftsH ATP-dependent zinc metalloprotease FtsH
1615 CP094969.1 GCA_023704215.1_01615 CDS open 1917123-1917992 870_na     289_aa hypothetical protein
1616 CP094969.1 GCA_023704215.1_01616 CDS open 1917989-1918606 618_na     205_aa hypothetical protein
1617 CP094969.1 GCA_023704215.1_01617 CDS open 1918673-1919578 906_na     301_aa tesB Acyl-CoA thioesterase 2
1618 CP094969.1 GCA_023704215.1_01618 CDS open 1919816-1921471 1656_na     551_aa ettA Energy-dependent translational throttle protein EttA
1619 CP094969.1 GCA_023704215.1_01619 CDS open 1921660-1922088 429_na     142_aa def_3 Peptide deformylase
1620 CP094969.1 GCA_023704215.1_01620 CDS open 1922120-1923406 1287_na     428_aa O-acetyl-L-homoserine sulfhydrylase
1621 CP094969.1 GCA_023704215.1_01621 CDS open 1923694-1924326 633_na     210_aa hypothetical protein
1622 CP094969.1 GCA_023704215.1_01622 CDS open 1924608-1925516 909_na     302_aa hypothetical protein
1623 CP094969.1 tRNA open 1925603-1925677 tRNA-Met(cat)
1624 CP094969.1 GCA_023704215.1_01624 CDS open 1925754-1926659 906_na     301_aa hypothetical protein
1625 CP094969.1 GCA_023704215.1_01625 CDS open 1927024-1927233 210_na     69_aa rpmE_2 50S ribosomal protein L31
1626 CP094969.1 GCA_023704215.1_01626 CDS open 1927527-1928879 1353_na     450_aa xylA Xylose isomerase
1627 CP094969.1 GCA_023704215.1_01627 CDS open 1929284-1930966 1683_na     560_aa hypothetical protein
1628 CP094969.1 GCA_023704215.1_01628 CDS open 1930979-1931983 1005_na     334_aa cytR_4 HTH-type transcriptional repressor CytR
1629 CP094969.1 GCA_023704215.1_01629 CDS open 1932314-1933591 1278_na     425_aa dasA Diacetylchitobiose binding protein DasA
1630 CP094969.1 GCA_023704215.1_01630 CDS open 1933700-1934758 1059_na     352_aa melD_3 Melibioseraffinosestachyose import permease protein MelD
1631 CP094969.1 GCA_023704215.1_01631 CDS open 1934760-1935629 870_na     289_aa ngcG_2 Diacetylchitobiose uptake system permease protein NgcG
1632 CP094969.1 GCA_023704215.1_01632 CDS open 1935707-1937332 1626_na     541_aa xynB Beta-xylosidase
1633 CP094969.1 GCA_023704215.1_01633 CDS open 1937438-1939363 1926_na     641_aa hypothetical protein
1634 CP094969.1 GCA_023704215.1_01634 CDS open 1939600-1940763 1164_na     387_aa pnbA Para-nitrobenzyl esterase
1635 CP094969.1 GCA_023704215.1_01635 CDS open 1940776-1942335 1560_na     519_aa hypothetical protein
1636 CP094969.1 GCA_023704215.1_01636 CDS open 1942425-1943954 1530_na     509_aa xylB_2 Xylulose kinase