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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Parabacteroides merdae (GCA_024125345.1)

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PROKKA Annotations for GCA_024125345.1
Genome Selected: Parabacteroides merdae
ContigsBases CDSrRNA tmRNAtRNA
6 4718822 3949 19 1 80
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:9]    |    Number of Records Found: 4069 [9 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
4001 JAMXVJ010000004.1 GCA_024125345.1_04001 CDS open 29819-30400 582_na     193_aa cdd Cytidine deaminase
4002 JAMXVJ010000004.1 GCA_024125345.1_04002 CDS open 30878-31780 903_na     300_aa hypothetical protein
4003 JAMXVJ010000004.1 GCA_024125345.1_04003 CDS open 31825-32997 1173_na     390_aa purM Phosphoribosylformylglycinamidine cyclo-ligase
4004 JAMXVJ010000004.1 GCA_024125345.1_04004 CDS open 32978-34099 1122_na     373_aa prfA Peptide chain release factor 1
4005 JAMXVJ010000004.1 GCA_024125345.1_04005 CDS open 34135-34977 843_na     280_aa pyrF Orotidine 5-phosphate decarboxylase
4006 JAMXVJ010000004.1 GCA_024125345.1_04006 CDS open 35067-36122 1056_na     351_aa lpxD_2 UDP-3-O-acylglucosamine N-acyltransferase
4007 JAMXVJ010000004.1 GCA_024125345.1_04007 CDS open 36162-37547 1386_na     461_aa lpxC UDP-3-O-acyl-N-acetylglucosamine deacetylase
4008 JAMXVJ010000004.1 GCA_024125345.1_04008 CDS open 37644-38429 786_na     261_aa lpxA_1 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
4009 JAMXVJ010000004.1 GCA_024125345.1_04009 CDS open 38561-39121 561_na     186_aa hypothetical protein
4010 JAMXVJ010000004.1 GCA_024125345.1_04010 CDS open 39125-40033 909_na     302_aa miaA_2 tRNA dimethylallyltransferase
4011 JAMXVJ010000004.1 GCA_024125345.1_04011 CDS open 40113-40484 372_na     123_aa hypothetical protein
4012 JAMXVJ010000004.1 GCA_024125345.1_04012 CDS open 40493-41248 756_na     251_aa ttcA tRNA-cytidine(32) 2-sulfurtransferase
4013 JAMXVJ010000004.1 GCA_024125345.1_04013 CDS open 41303-42838 1536_na     511_aa hypothetical protein
4014 JAMXVJ010000004.1 GCA_024125345.1_04014 CDS open 42850-43320 471_na     156_aa hypothetical protein
4015 JAMXVJ010000004.1 GCA_024125345.1_04015 CDS open 43359-44351 993_na     330_aa hypothetical protein
4016 JAMXVJ010000004.1 GCA_024125345.1_04016 CDS open 44444-45307 864_na     287_aa udp Uridine phosphorylase
4017 JAMXVJ010000004.1 GCA_024125345.1_04017 CDS open 45388-46128 741_na     246_aa hypothetical protein
4018 JAMXVJ010000004.1 GCA_024125345.1_04018 CDS open 46160-47350 1191_na     396_aa hypothetical protein
4019 JAMXVJ010000004.1 GCA_024125345.1_04019 CDS open 47464-48585 1122_na     373_aa rsxB_4 Ion-translocating oxidoreductase complex subunit B
4020 JAMXVJ010000004.1 GCA_024125345.1_04020 CDS open 48590-49972 1383_na     460_aa mnmE tRNA modification GTPase MnmE
4021 JAMXVJ010000004.1 GCA_024125345.1_04021 CDS open 50240-51151 912_na     303_aa hypothetical protein
4022 JAMXVJ010000004.1 GCA_024125345.1_04022 CDS open 51236-52342 1107_na     368_aa xerC_27 Tyrosine recombinase XerC
4023 JAMXVJ010000004.1 GCA_024125345.1_04023 CDS open 52339-52713 375_na     124_aa hypothetical protein
4024 JAMXVJ010000004.1 GCA_024125345.1_04024 CDS open 52797-52886 90_na     29_aa hypothetical protein
4025 JAMXVJ010000004.1 GCA_024125345.1_04025 CDS open 52895-53776 882_na     293_aa hypothetical protein
4026 JAMXVJ010000004.1 GCA_024125345.1_04026 CDS open 53909-55222 1314_na     437_aa hypothetical protein
4027 JAMXVJ010000004.1 GCA_024125345.1_04027 CDS open 55291-55404 114_na     37_aa hypothetical protein
4028 JAMXVJ010000004.1 GCA_024125345.1_04028 CDS open 55565-55930 366_na     121_aa hypothetical protein
4029 JAMXVJ010000004.1 GCA_024125345.1_04029 CDS open 55942-57318 1377_na     458_aa hypothetical protein
4030 JAMXVJ010000004.1 GCA_024125345.1_04030 CDS open 57397-58476 1080_na     359_aa hypothetical protein
4031 JAMXVJ010000004.1 GCA_024125345.1_04031 CDS open 58615-58923 309_na     102_aa hypothetical protein
4032 JAMXVJ010000004.1 GCA_024125345.1_04032 CDS open 58913-59854 942_na     313_aa hypothetical protein
4033 JAMXVJ010000004.1 GCA_024125345.1_04033 CDS open 59890-60288 399_na     132_aa hypothetical protein
4034 JAMXVJ010000004.1 GCA_024125345.1_04034 CDS open 60224-60946 723_na     240_aa hypothetical protein
4035 JAMXVJ010000004.1 GCA_024125345.1_04035 CDS open 61096-62088 993_na     330_aa xerD_3 Tyrosine recombinase XerD
4036 JAMXVJ010000004.1 GCA_024125345.1_04036 CDS open 62158-63039 882_na     293_aa hypothetical protein
4037 JAMXVJ010000004.1 GCA_024125345.1_04037 CDS open 63036-64331 1296_na     431_aa hypothetical protein
4038 JAMXVJ010000004.1 GCA_024125345.1_04038 CDS open 64255-64857 603_na     200_aa hypothetical protein
4039 JAMXVJ010000004.1 GCA_024125345.1_04039 CDS open 64870-65874 1005_na     334_aa hypothetical protein
4040 JAMXVJ010000004.1 GCA_024125345.1_04040 CDS open 65867-67528 1662_na     553_aa hypothetical protein
4041 JAMXVJ010000004.1 GCA_024125345.1_04041 CDS open 67534-70764 3231_na     1076_aa hypothetical protein
4042 JAMXVJ010000004.1 GCA_024125345.1_04042 CDS open 70766-70969 204_na     67_aa hypothetical protein
4043 JAMXVJ010000004.1 GCA_024125345.1_04043 CDS open 71093-71767 675_na     224_aa hypothetical protein
4044 JAMXVJ010000004.1 GCA_024125345.1_04044 CDS open 71742-71921 180_na     59_aa hypothetical protein
4045 JAMXVJ010000004.1 GCA_024125345.1_04045 CDS open 72013-72525 513_na     170_aa hypothetical protein
4046 JAMXVJ010000004.1 GCA_024125345.1_04046 CDS open 72627-72902 276_na     91_aa hypothetical protein
4047 JAMXVJ010000004.1 GCA_024125345.1_04047 CDS open 72850-72966 117_na     38_aa hypothetical protein
4048 JAMXVJ010000004.1 GCA_024125345.1_04048 CDS open 72982-73182 201_na     66_aa hypothetical protein
4049 JAMXVJ010000004.1 GCA_024125345.1_04049 CDS open 73737-74522 786_na     261_aa hypothetical protein
4050 JAMXVJ010000004.1 GCA_024125345.1_04050 CDS open 74571-75800 1230_na     409_aa hypothetical protein
4051 JAMXVJ010000004.1 GCA_024125345.1_04051 CDS open 75812-76339 528_na     175_aa algU_2 RNA polymerase sigma-H factor
4052 JAMXVJ010000004.1 GCA_024125345.1_04052 CDS open 76639-78117 1479_na     492_aa hypothetical protein
4053 JAMXVJ010000004.1 GCA_024125345.1_04053 CDS open 78131-78907 777_na     258_aa hypothetical protein
4054 JAMXVJ010000004.1 GCA_024125345.1_04054 CDS open 78932-79885 954_na     317_aa trxB Thioredoxin reductase
4055 JAMXVJ010000004.1 GCA_024125345.1_04055 CDS open 79965-80633 669_na     222_aa hypothetical protein
4056 JAMXVJ010000004.1 GCA_024125345.1_04056 CDS open 80750-83248 2499_na     832_aa hypothetical protein
4057 JAMXVJ010000004.1 GCA_024125345.1_04057 CDS open 83275-83436 162_na     53_aa hypothetical protein
4058 JAMXVJ010000004.1 GCA_024125345.1_04058 CDS open 83442-83987 546_na     181_aa hypothetical protein
4059 JAMXVJ010000004.1 GCA_024125345.1_04059 CDS open 83984-84565 582_na     193_aa rnd Ribonuclease D
4060 JAMXVJ010000004.1 GCA_024125345.1_04060 CDS open 84566-85750 1185_na     394_aa rlmI Ribosomal RNA large subunit methyltransferase I
4061 JAMXVJ010000004.1 GCA_024125345.1_04061 CDS open 85942-86883 942_na     313_aa mdh_2 Malate dehydrogenase
4062 JAMXVJ010000004.1 GCA_024125345.1_04062 CDS open 87412-88152 741_na     246_aa hypothetical protein
4063 JAMXVJ010000004.1 GCA_024125345.1_04063 CDS open 88266-89033 768_na     255_aa lpxA_2 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
4064 JAMXVJ010000004.1 GCA_024125345.1_04064 CDS open 89065-90450 1386_na     461_aa oprM_5 Outer membrane protein OprM
4065 JAMXVJ010000004.1 GCA_024125345.1_04065 CDS open 90460-93678 3219_na     1072_aa bepE_5 Efflux pump membrane transporter BepE
4066 JAMXVJ010000004.1 GCA_024125345.1_04066 CDS open 93711-94910 1200_na     399_aa mexA_3 Multidrug resistance protein MexA
4067 JAMXVJ010000005.1 GCA_024125345.1_04067 CDS open 31-654 624_na     207_aa hypothetical protein
4068 JAMXVJ010000005.1 GCA_024125345.1_04068 CDS open 1274-2377 1104_na     367_aa hypothetical protein
4069 JAMXVJ010000006.1 GCA_024125345.1_04069 CDS open 33-893 861_na     286_aa hypothetical protein