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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Pseudomonas otitidis (GCA_030166435.1)

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PROKKA Annotations for GCA_030166435.1
Genome Selected: Pseudomonas otitidis
ContigsBases CDSrRNA tmRNAtRNA
1 6062106 5464 12 1 74
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Annotation Table [page:12]    |    Number of Records Found: 5634 [12 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  10  11  12  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
5501 CP126342.1 tRNA open 5909868-5909944 tRNA-Arg(ccg)
5502 CP126342.1 GCA_030166435.1_05502 CDS open 5910015-5911511 1497_na     498_aa pmfR Transcriptional activator PmfR
5503 CP126342.1 GCA_030166435.1_05503 CDS open 5911572-5912804 1233_na     410_aa tyrP Tyrosine-specific transport protein
5504 CP126342.1 GCA_030166435.1_05504 CDS open 5912882-5914288 1407_na     468_aa puuB_7 Gamma-glutamylputrescine oxidoreductase
5505 CP126342.1 rRNA open 5914546-5914655 5S ribosomal RNA
5506 CP126342.1 rRNA open 5914781-5917669 23S ribosomal RNA
5507 CP126342.1 tRNA open 5917896-5917971 tRNA-Ala(tgc)
5508 CP126342.1 tRNA open 5917998-5918074 tRNA-Ile(gat)
5509 CP126342.1 rRNA open 5918169-5919699 16S ribosomal RNA
5510 CP126342.1 GCA_030166435.1_05510 CDS open 5920193-5921416 1224_na     407_aa uctC Acetyl-CoA:oxalate CoA-transferase
5511 CP126342.1 GCA_030166435.1_05511 CDS open 5921491-5922672 1182_na     393_aa mmgC_6 Acyl-CoA dehydrogenase
5512 CP126342.1 GCA_030166435.1_05512 CDS open 5922853-5923761 909_na     302_aa gcvA_12 Glycine cleavage system transcriptional activator
5513 CP126342.1 GCA_030166435.1_05513 CDS open 5923971-5925737 1767_na     588_aa hypothetical protein
5514 CP126342.1 GCA_030166435.1_05514 CDS open 5925760-5927130 1371_na     456_aa putative protein
5515 CP126342.1 GCA_030166435.1_05515 CDS open 5927263-5929782 2520_na     839_aa malT_5 HTH-type transcriptional regulator MalT
5516 CP126342.1 GCA_030166435.1_05516 CDS open 5930290-5931411 1122_na     373_aa pntAA NAD(P) transhydrogenase subunit alpha part 1
5517 CP126342.1 GCA_030166435.1_05517 CDS open 5931424-5931738 315_na     104_aa pntA NAD(P) transhydrogenase subunit alpha
5518 CP126342.1 GCA_030166435.1_05518 CDS open 5931741-5933177 1437_na     478_aa pntB NAD(P) transhydrogenase subunit beta
5519 CP126342.1 GCA_030166435.1_05519 CDS open 5933428-5935611 2184_na     727_aa uvrD DNA helicase II
5520 CP126342.1 GCA_030166435.1_05520 CDS open 5935812-5938697 2886_na     961_aa hypothetical protein
5521 CP126342.1 GCA_030166435.1_05521 CDS open 5938681-5940024 1344_na     447_aa hypothetical protein
5522 CP126342.1 GCA_030166435.1_05522 CDS open 5940281-5941720 1440_na     479_aa zwf_2 Glucose-6-phosphate 1-dehydrogenase
5523 CP126342.1 GCA_030166435.1_05523 CDS open 5941877-5942743 867_na     288_aa hexR_2 HTH-type transcriptional regulator HexR
5524 CP126342.1 GCA_030166435.1_05524 CDS open 5942766-5943542 777_na     258_aa pcaR_2 Pca regulon regulatory protein
5525 CP126342.1 GCA_030166435.1_05525 CDS open 5943710-5944465 756_na     251_aa artJ_3 ABC transporter arginine-binding protein 1
5526 CP126342.1 GCA_030166435.1_05526 CDS open 5944526-5945182 657_na     218_aa yecS_4 L-cystine transport system permease protein YecS
5527 CP126342.1 GCA_030166435.1_05527 CDS open 5945179-5945922 744_na     247_aa tcyC_2 L-cystine import ATP-binding protein TcyC
5528 CP126342.1 GCA_030166435.1_05528 CDS open 5945919-5947205 1287_na     428_aa puuB_8 Gamma-glutamylputrescine oxidoreductase
5529 CP126342.1 GCA_030166435.1_05529 CDS open 5947316-5947540 225_na     74_aa hypothetical protein
5530 CP126342.1 GCA_030166435.1_05530 CDS open 5947482-5948444 963_na     320_aa cmpR_8 HTH-type transcriptional activator CmpR
5531 CP126342.1 GCA_030166435.1_05531 CDS open 5948634-5950049 1416_na     471_aa cfiB 2-oxoglutarate carboxylase small subunit
5532 CP126342.1 GCA_030166435.1_05532 CDS open 5950066-5951871 1806_na     601_aa oadA Oxaloacetate decarboxylase alpha chain
5533 CP126342.1 GCA_030166435.1_05533 CDS open 5952412-5952852 441_na     146_aa IMPDH_3 Inosine-5-monophosphate dehydrogenase
5534 CP126342.1 GCA_030166435.1_05534 CDS open 5952859-5953395 537_na     178_aa hypothetical protein
5535 CP126342.1 GCA_030166435.1_05535 CDS open 5953461-5953706 246_na     81_aa hypothetical protein
5536 CP126342.1 GCA_030166435.1_05536 CDS open 5953789-5954871 1083_na     360_aa purK N5-carboxyaminoimidazole ribonucleotide synthase
5537 CP126342.1 GCA_030166435.1_05537 CDS open 5954875-5955366 492_na     163_aa purE N5-carboxyaminoimidazole ribonucleotide mutase
5538 CP126342.1 GCA_030166435.1_05538 CDS open 5955613-5956635 1023_na     340_aa Alcohol dehydrogenase
5539 CP126342.1 GCA_030166435.1_05539 CDS open 5956651-5957577 927_na     308_aa yjiE HTH-type transcriptional regulator YjiE
5540 CP126342.1 GCA_030166435.1_05540 CDS open 5957758-5959182 1425_na     474_aa aspA Aspartate ammonia-lyase
5541 CP126342.1 GCA_030166435.1_05541 CDS open 5959928-5961394 1467_na     488_aa gabR_3 HTH-type transcriptional regulatory protein GabR
5542 CP126342.1 GCA_030166435.1_05542 CDS open 5961491-5962123 633_na     210_aa paiB Protease synthase and sporulation protein PAI 2
5543 CP126342.1 GCA_030166435.1_05543 CDS open 5962152-5962595 444_na     147_aa hypothetical protein
5544 CP126342.1 GCA_030166435.1_05544 CDS open 5962606-5963283 678_na     225_aa hypothetical protein
5545 CP126342.1 GCA_030166435.1_05545 CDS open 5963449-5966352 2904_na     967_aa hypothetical protein
5546 CP126342.1 GCA_030166435.1_05546 CDS open 5966754-5967455 702_na     233_aa hypothetical protein
5547 CP126342.1 GCA_030166435.1_05547 CDS open 5967484-5968302 819_na     272_aa hypothetical protein
5548 CP126342.1 GCA_030166435.1_05548 CDS open 5968483-5969928 1446_na     481_aa alsT_2 Amino-acid carrier protein AlsT
5549 CP126342.1 GCA_030166435.1_05549 CDS open 5970087-5971076 990_na     329_aa ansA L-asparaginase 1
5550 CP126342.1 GCA_030166435.1_05550 CDS open 5971297-5972790 1494_na     497_aa cat1 Succinyl-CoA:coenzyme A transferase
5551 CP126342.1 GCA_030166435.1_05551 CDS open 5973103-5973318 216_na     71_aa hypothetical protein
5552 CP126342.1 GCA_030166435.1_05552 CDS open 5973552-5973761 210_na     69_aa hypothetical protein
5553 CP126342.1 GCA_030166435.1_05553 CDS open 5973893-5974210 318_na     105_aa hypothetical protein
5554 CP126342.1 GCA_030166435.1_05554 CDS open 5974383-5974703 321_na     106_aa hypothetical protein
5555 CP126342.1 GCA_030166435.1_05555 CDS open 5974714-5976684 1971_na     656_aa hypothetical protein
5556 CP126342.1 misc_RNA open 5977625-5977715 sRNA-Xcc1
5557 CP126342.1 GCA_030166435.1_05557 CDS open 5977753-5978226 474_na     157_aa hypothetical protein
5558 CP126342.1 GCA_030166435.1_05558 CDS open 5978245-5978646 402_na     133_aa hypothetical protein
5559 CP126342.1 GCA_030166435.1_05559 CDS open 5978751-5979668 918_na     305_aa hypothetical protein
5560 CP126342.1 GCA_030166435.1_05560 CDS open 5979937-5981244 1308_na     435_aa citN_2 Citrate transporter
5561 CP126342.1 GCA_030166435.1_05561 CDS open 5981345-5982106 762_na     253_aa hypothetical protein
5562 CP126342.1 GCA_030166435.1_05562 CDS open 5982279-5983217 939_na     312_aa hypothetical protein
5563 CP126342.1 GCA_030166435.1_05563 CDS open 5983696-5984313 618_na     205_aa prfA_2 Peptide chain release factor 1
5564 CP126342.1 GCA_030166435.1_05564 CDS open 5984313-5985449 1137_na     378_aa rtcB_3 RNA-splicing ligase RtcB
5565 CP126342.1 GCA_030166435.1_05565 CDS open 5986117-5986968 852_na     283_aa hypothetical protein
5566 CP126342.1 GCA_030166435.1_05566 CDS open 5987139-5988053 915_na     304_aa cheB_10 Protein-glutamate methylesteraseprotein-glutamine glutaminase
5567 CP126342.1 GCA_030166435.1_05567 CDS open 5988184-5988915 732_na     243_aa phoU Phosphate-specific transport system accessory protein PhoU
5568 CP126342.1 GCA_030166435.1_05568 CDS open 5989019-5989852 834_na     277_aa pstB Phosphate import ATP-binding protein PstB
5569 CP126342.1 GCA_030166435.1_05569 CDS open 5989931-5991601 1671_na     556_aa hypothetical protein
5570 CP126342.1 GCA_030166435.1_05570 CDS open 5991710-5993998 2289_na     762_aa hypothetical protein
5571 CP126342.1 GCA_030166435.1_05571 CDS open 5994172-5995143 972_na     323_aa pstS Phosphate-binding protein PstS
5572 CP126342.1 GCA_030166435.1_05572 CDS open 5995322-5996626 1305_na     434_aa hypothetical protein
5573 CP126342.1 GCA_030166435.1_05573 CDS open 5996851-5998137 1287_na     428_aa abaF_2 Fosfomycin resistance protein AbaF
5574 CP126342.1 GCA_030166435.1_05574 CDS open 5998430-5998834 405_na     134_aa putative acyl-CoA thioester hydrolase
5575 CP126342.1 GCA_030166435.1_05575 CDS open 5998907-5999815 909_na     302_aa yeaD Putative glucose-6-phosphate 1-epimerase
5576 CP126342.1 GCA_030166435.1_05576 CDS open 5999947-6000810 864_na     287_aa hypothetical protein
5577 CP126342.1 GCA_030166435.1_05577 CDS open 6001095-6001574 480_na     159_aa elaA Protein ElaA
5578 CP126342.1 GCA_030166435.1_05578 CDS open 6001699-6002106 408_na     135_aa hypothetical protein
5579 CP126342.1 GCA_030166435.1_05579 CDS open 6002141-6002806 666_na     221_aa mcbR HTH-type transcriptional regulator McbR
5580 CP126342.1 GCA_030166435.1_05580 CDS open 6003077-6004468 1392_na     463_aa hemL_2 Glutamate-1-semialdehyde 2%2C1-aminomutase
5581 CP126342.1 GCA_030166435.1_05581 CDS open 6004557-6005924 1368_na     455_aa puuA_5 Gamma-glutamylputrescine synthetase PuuA
5582 CP126342.1 GCA_030166435.1_05582 CDS open 6005973-6007244 1272_na     423_aa hypothetical protein
5583 CP126342.1 GCA_030166435.1_05583 CDS open 6007429-6007923 495_na     164_aa hypothetical protein
5584 CP126342.1 GCA_030166435.1_05584 CDS open 6007986-6008516 531_na     176_aa hypothetical protein
5585 CP126342.1 GCA_030166435.1_05585 CDS open 6008615-6008962 348_na     115_aa hypothetical protein
5586 CP126342.1 GCA_030166435.1_05586 CDS open 6009238-6010107 870_na     289_aa pdxY Pyridoxal kinase PdxY
5587 CP126342.1 tRNA open 6011271-6011351 tRNA-Pro(cgg)
5588 CP126342.1 GCA_030166435.1_05588 CDS open 6011793-6012206 414_na     137_aa hypothetical protein
5589 CP126342.1 GCA_030166435.1_05589 CDS open 6012217-6012588 372_na     123_aa hypothetical protein
5590 CP126342.1 GCA_030166435.1_05590 CDS open 6012585-6013463 879_na     292_aa hypothetical protein
5591 CP126342.1 GCA_030166435.1_05591 CDS open 6013636-6015393 1758_na     585_aa dctB_2 C4-dicarboxylate transport sensor protein DctB
5592 CP126342.1 GCA_030166435.1_05592 CDS open 6015390-6016736 1347_na     448_aa dctD_3 C4-dicarboxylate transport transcriptional regulatory protein DctD
5593 CP126342.1 GCA_030166435.1_05593 CDS open 6018430-6019737 1308_na     435_aa kgtP Alpha-ketoglutarate permease
5594 CP126342.1 GCA_030166435.1_05594 CDS open 6020191-6021294 1104_na     367_aa IS481 family transposase ISAzvi11
5595 CP126342.1 GCA_030166435.1_05595 CDS open 6021443-6022420 978_na     325_aa yeiR Zinc-binding GTPase YeiR
5596 CP126342.1 GCA_030166435.1_05596 CDS open 6022636-6023022 387_na     128_aa hypothetical protein
5597 CP126342.1 GCA_030166435.1_05597 CDS open 6023140-6023784 645_na     214_aa hypothetical protein
5598 CP126342.1 GCA_030166435.1_05598 CDS open 6023784-6024989 1206_na     401_aa yciC_2 Putative metal chaperone YciC
5599 CP126342.1 GCA_030166435.1_05599 CDS open 6025022-6025438 417_na     138_aa dksA_2 RNA polymerase-binding transcription factor DksA
5600 CP126342.1 GCA_030166435.1_05600 CDS open 6025514-6026404 891_na     296_aa folE2 GTP cyclohydrolase FolE2
5601 CP126342.1 GCA_030166435.1_05601 CDS open 6026660-6027982 1323_na     440_aa oprD_5 Porin D
5602 CP126342.1 GCA_030166435.1_05602 CDS open 6028123-6028329 207_na     68_aa hypothetical protein
5603 CP126342.1 GCA_030166435.1_05603 CDS open 6028595-6029341 747_na     248_aa hypothetical protein
5604 CP126342.1 GCA_030166435.1_05604 CDS open 6029384-6032536 3153_na     1050_aa czcA Cobalt-zinc-cadmium resistance protein CzcA
5605 CP126342.1 GCA_030166435.1_05605 CDS open 6032549-6033739 1191_na     396_aa czcB Cobalt-zinc-cadmium resistance protein CzcB
5606 CP126342.1 GCA_030166435.1_05606 CDS open 6033730-6033891 162_na     53_aa hypothetical protein
5607 CP126342.1 GCA_030166435.1_05607 CDS open 6033895-6035145 1251_na     416_aa czcC Cobalt-zinc-cadmium resistance protein CzcC
5608 CP126342.1 GCA_030166435.1_05608 CDS open 6035564-6036238 675_na     224_aa czcR_2 Transcriptional activator protein CzcR
5609 CP126342.1 GCA_030166435.1_05609 CDS open 6036235-6037614 1380_na     459_aa czcS Sensor protein CzcS
5610 CP126342.1 GCA_030166435.1_05610 CDS open 6037713-6038876 1164_na     387_aa yjfC_2 Putative acid--amine ligase YjfC
5611 CP126342.1 GCA_030166435.1_05611 CDS open 6038844-6039593 750_na     249_aa hypothetical protein
5612 CP126342.1 GCA_030166435.1_05612 CDS open 6039580-6040443 864_na     287_aa hypothetical protein
5613 CP126342.1 GCA_030166435.1_05613 CDS open 6040450-6041235 786_na     261_aa hypothetical protein
5614 CP126342.1 GCA_030166435.1_05614 CDS open 6041392-6043224 1833_na     610_aa glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
5615 CP126342.1 GCA_030166435.1_05615 CDS open 6043236-6044006 771_na     256_aa srlR Glucitol operon repressor
5616 CP126342.1 GCA_030166435.1_05616 CDS open 6044149-6045510 1362_na     453_aa glmU Bifunctional protein GlmU
5617 CP126342.1 GCA_030166435.1_05617 CDS open 6045610-6046035 426_na     141_aa atpC ATP synthase epsilon chain
5618 CP126342.1 GCA_030166435.1_05618 CDS open 6046079-6047455 1377_na     458_aa atpD ATP synthase subunit beta
5619 CP126342.1 GCA_030166435.1_05619 CDS open 6047486-6048346 861_na     286_aa atpG ATP synthase gamma chain
5620 CP126342.1 GCA_030166435.1_05620 CDS open 6048397-6049941 1545_na     514_aa atpA ATP synthase subunit alpha
5621 CP126342.1 GCA_030166435.1_05621 CDS open 6049963-6050499 537_na     178_aa atpH_1 ATP synthase subunit delta
5622 CP126342.1 GCA_030166435.1_05622 CDS open 6050512-6050982 471_na     156_aa atpF ATP synthase subunit b
5623 CP126342.1 GCA_030166435.1_05623 CDS open 6051031-6051288 258_na     85_aa atpH_2 ATP synthase subunit c
5624 CP126342.1 GCA_030166435.1_05624 CDS open 6051472-6052341 870_na     289_aa atpB ATP synthase subunit a
5625 CP126342.1 GCA_030166435.1_05625 CDS open 6052358-6052765 408_na     135_aa hypothetical protein
5626 CP126342.1 GCA_030166435.1_05626 CDS open 6052913-6053785 873_na     290_aa parB putative chromosome-partitioning protein ParB
5627 CP126342.1 GCA_030166435.1_05627 CDS open 6053795-6054583 789_na     262_aa parA Chromosome partitioning protein ParA
5628 CP126342.1 GCA_030166435.1_05628 CDS open 6054601-6055248 648_na     215_aa rsmG Ribosomal RNA small subunit methyltransferase G
5629 CP126342.1 GCA_030166435.1_05629 CDS open 6055248-6057140 1893_na     630_aa mnmG tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
5630 CP126342.1 GCA_030166435.1_05630 CDS open 6057658-6059025 1368_na     455_aa mnmE tRNA modification GTPase MnmE
5631 CP126342.1 GCA_030166435.1_05631 CDS open 6059097-6060779 1683_na     560_aa yidC Membrane protein insertase YidC
5632 CP126342.1 GCA_030166435.1_05632 CDS open 6060782-6061027 246_na     81_aa yidD Putative membrane protein insertion efficiency factor
5633 CP126342.1 GCA_030166435.1_05633 CDS open 6061020-6061421 402_na     133_aa rnpA Ribonuclease P protein component
5634 CP126342.1 GCA_030166435.1_05634 CDS open 6061439-6061573 135_na     44_aa rpmH 50S ribosomal protein L34