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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Pseudomonas otitidis (GCA_030418255.1)

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PROKKA Annotations for GCA_030418255.1
Genome Selected: Pseudomonas otitidis
ContigsBases CDSrRNA tmRNAtRNA
33 6,031,849 5499 3 1 71
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Annotation Table [page:12]    |    Number of Records Found: 5652 [12 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  10  11  12  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
5501 JARGCP010000009.1 GCA_030418255.1_05501 CDS open 111625-112260 636_na     211_aa hypothetical protein
5502 JARGCP010000009.1 GCA_030418255.1_05502 CDS open 112318-113985 1668_na     555_aa ettA Energy-dependent translational throttle protein EttA
5503 JARGCP010000009.1 GCA_030418255.1_05503 CDS open 114318-114857 540_na     179_aa sfaA S-fimbrial protein subunit SfaA
5504 JARGCP010000009.1 GCA_030418255.1_05504 CDS open 114919-115629 711_na     236_aa yadV_2 putative fimbrial chaperone YadV
5505 JARGCP010000009.1 GCA_030418255.1_05505 CDS open 115636-118107 2472_na     823_aa htrE Outer membrane usher protein HtrE
5506 JARGCP010000009.1 GCA_030418255.1_05506 CDS open 118121-119116 996_na     331_aa hypothetical protein
5507 JARGCP010000009.1 GCA_030418255.1_05507 CDS open 119125-120087 963_na     320_aa hypothetical protein
5508 JARGCP010000009.1 GCA_030418255.1_05508 CDS open 120272-124492 4221_na     1406_aa hypothetical protein
5509 JARGCP010000009.1 GCA_030418255.1_05509 CDS open 124615-126495 1881_na     626_aa hypothetical protein
5510 JARGCP010000009.1 GCA_030418255.1_05510 CDS open 126596-127849 1254_na     417_aa glyA_2 Serine hydroxymethyltransferase
5511 JARGCP010000009.1 GCA_030418255.1_05511 CDS open 128079-130469 2391_na     796_aa fatA Ferric-anguibactin receptor FatA
5512 JARGCP010000009.1 GCA_030418255.1_05512 CDS open 130534-131469 936_na     311_aa fecR_7 Protein FecR
5513 JARGCP010000009.1 GCA_030418255.1_05513 CDS open 131466-131981 516_na     171_aa fecI_7 putative RNA polymerase sigma factor FecI
5514 JARGCP010000009.1 GCA_030418255.1_05514 CDS open 132064-133035 972_na     323_aa yjiA_2 P-loop guanosine triphosphatase YjiA
5515 JARGCP010000009.1 GCA_030418255.1_05515 CDS open 133127-133330 204_na     67_aa hypothetical protein
5516 JARGCP010000009.1 GCA_030418255.1_05516 CDS open 133344-135410 2067_na     688_aa btsT Pyruvateproton symporter BtsT
5517 JARGCP010000009.1 GCA_030418255.1_05517 CDS open 135684-136190 507_na     168_aa hypothetical protein
5518 JARGCP010000009.1 GCA_030418255.1_05518 CDS open 136401-137615 1215_na     404_aa hypothetical protein
5519 JARGCP010000009.1 GCA_030418255.1_05519 CDS open 137602-139776 2175_na     724_aa hypothetical protein
5520 JARGCP010000009.1 GCA_030418255.1_05520 CDS open 139832-140200 369_na     122_aa Cyclic diguanosine monophosphate-binding protein
5521 JARGCP010000009.1 GCA_030418255.1_05521 CDS open 140204-141571 1368_na     455_aa radA DNA repair protein RadA
5522 JARGCP010000009.1 GCA_030418255.1_05522 CDS open 141614-141886 273_na     90_aa hypothetical protein
5523 JARGCP010000009.1 GCA_030418255.1_05523 CDS open 141954-142202 249_na     82_aa hypothetical protein
5524 JARGCP010000009.1 GCA_030418255.1_05524 CDS open 142361-142648 288_na     95_aa hypothetical protein
5525 JARGCP010000009.1 GCA_030418255.1_05525 CDS open 142714-143130 417_na     138_aa mscL Large-conductance mechanosensitive channel
5526 JARGCP010000009.1 GCA_030418255.1_05526 CDS open 143186-144760 1575_na     524_aa hypothetical protein
5527 JARGCP010000009.1 GCA_030418255.1_05527 CDS open 144987-145523 537_na     178_aa hypothetical protein
5528 JARGCP010000009.1 GCA_030418255.1_05528 CDS open 145520-147190 1671_na     556_aa sir_3 Sulfite reductase [ferredoxin]
5529 JARGCP010000009.1 GCA_030418255.1_05529 CDS open 147458-148882 1425_na     474_aa ccoN1_3 Cbb3-type cytochrome c oxidase subunit CcoN1
5530 JARGCP010000009.1 GCA_030418255.1_05530 CDS open 148893-149135 243_na     80_aa hypothetical protein
5531 JARGCP010000009.1 GCA_030418255.1_05531 CDS open 149454-150650 1197_na     398_aa fabV Enoyl-[acyl-carrier-protein] reductase [NADH]
5532 JARGCP010000009.1 GCA_030418255.1_05532 CDS open 150770-151546 777_na     258_aa fpr_2 Flavodoxinferredoxin--NADP reductase
5533 JARGCP010000009.1 GCA_030418255.1_05533 CDS open 151652-152644 993_na     330_aa dctP_3 C4-dicarboxylate-binding periplasmic protein DctP
5534 JARGCP010000009.1 GCA_030418255.1_05534 CDS open 152942-154066 1125_na     374_aa rlmG Ribosomal RNA large subunit methyltransferase G
5535 JARGCP010000009.1 GCA_030418255.1_05535 CDS open 154514-154660 147_na     48_aa hypothetical protein
5536 JARGCP010000009.1 GCA_030418255.1_05536 CDS open 154678-155685 1008_na     335_aa cydB_2 Cytochrome bd-I ubiquinol oxidase subunit 2
5537 JARGCP010000009.1 GCA_030418255.1_05537 CDS open 155688-157130 1443_na     480_aa hypothetical protein
5538 JARGCP010000009.1 GCA_030418255.1_05538 CDS open 157416-157988 573_na     190_aa pucB Purine catabolism protein PucB
5539 JARGCP010000009.1 GCA_030418255.1_05539 CDS open 158056-159027 972_na     323_aa hypothetical protein
5540 JARGCP010000009.1 GCA_030418255.1_05540 CDS open 159041-160264 1224_na     407_aa Gluconate 2-dehydrogenase cytochrome c subunit
5541 JARGCP010000009.1 GCA_030418255.1_05541 CDS open 160267-160806 540_na     179_aa hcrC 4-hydroxybenzoyl-CoA reductase subunit gamma
5542 JARGCP010000009.1 GCA_030418255.1_05542 CDS open 160799-163630 2832_na     943_aa hypothetical protein
5543 JARGCP010000009.1 GCA_030418255.1_05543 CDS open 163957-165174 1218_na     405_aa entS_2 Enterobactin exporter EntS
5544 JARGCP010000009.1 GCA_030418255.1_05544 CDS open 165175-167382 2208_na     735_aa paoC Aldehyde oxidoreductase molybdenum-binding subunit PaoC
5545 JARGCP010000009.1 GCA_030418255.1_05545 CDS open 167379-168365 987_na     328_aa paoB Aldehyde oxidoreductase FAD-binding subunit PaoB
5546 JARGCP010000009.1 GCA_030418255.1_05546 CDS open 168362-168892 531_na     176_aa paoA Aldehyde oxidoreductase iron-sulfur-binding subunit PaoA
5547 JARGCP010000009.1 GCA_030418255.1_05547 CDS open 169186-170478 1293_na     430_aa adeP Adenine permease AdeP
5548 JARGCP010000009.1 GCA_030418255.1_05548 CDS open 170478-171572 1095_na     364_aa trmA tRNAtmRNA (uracil-C(5))-methyltransferase
5549 JARGCP010000009.1 GCA_030418255.1_05549 CDS open 171854-173380 1527_na     508_aa ilvA_2 L-threonine dehydratase biosynthetic IlvA
5550 JARGCP010000009.1 GCA_030418255.1_05550 CDS open 173377-173793 417_na     138_aa yybH putative protein YybH
5551 JARGCP010000009.1 misc_RNA open 173835-173908 P9
5552 JARGCP010000009.1 GCA_030418255.1_05552 CDS open 173995-174816 822_na     273_aa hypothetical protein
5553 JARGCP010000009.1 GCA_030418255.1_05553 CDS open 174910-175425 516_na     171_aa hypothetical protein
5554 JARGCP010000009.1 GCA_030418255.1_05554 CDS open 175563-175982 420_na     139_aa hypothetical protein
5555 JARGCP010000009.1 GCA_030418255.1_05555 CDS open 176065-176499 435_na     144_aa hypothetical protein
5556 JARGCP010000009.1 GCA_030418255.1_05556 CDS open 176724-177581 858_na     285_aa phzF Trans-2%2C3-dihydro-3-hydroxyanthranilate isomerase
5557 JARGCP010000009.1 GCA_030418255.1_05557 CDS open 177648-178502 855_na     284_aa putative protein
5558 JARGCP010000009.1 GCA_030418255.1_05558 CDS open 178510-179139 630_na     209_aa gph_3 Phosphoglycolate phosphatase
5559 JARGCP010000009.1 GCA_030418255.1_05559 CDS open 179136-180005 870_na     289_aa tesB Acyl-CoA thioesterase 2
5560 JARGCP010000009.1 GCA_030418255.1_05560 CDS open 180206-180766 561_na     186_aa Acetyltransferase
5561 JARGCP010000009.1 GCA_030418255.1_05561 CDS open 180832-181752 921_na     306_aa hypothetical protein
5562 JARGCP010000009.1 GCA_030418255.1_05562 CDS open 181847-182365 519_na     172_aa hypothetical protein
5563 JARGCP010000009.1 GCA_030418255.1_05563 CDS open 182557-183792 1236_na     411_aa baiN 3-dehydro-bile acid delta(4%2C6)-reductase
5564 JARGCP010000009.1 GCA_030418255.1_05564 CDS open 183858-184469 612_na     203_aa hypothetical protein
5565 JARGCP010000009.1 GCA_030418255.1_05565 CDS open 184569-185576 1008_na     335_aa cheB_10 Protein-glutamate methylesteraseprotein-glutamine glutaminase
5566 JARGCP010000009.1 GCA_030418255.1_05566 CDS open 185580-186047 468_na     155_aa hypothetical protein
5567 JARGCP010000009.1 GCA_030418255.1_05567 CDS open 186621-187937 1317_na     438_aa rhlE_3 ATP-dependent RNA helicase RhlE
5568 JARGCP010000009.1 GCA_030418255.1_05568 CDS open 188027-188923 897_na     298_aa yedA_2 putative inner membrane transporter YedA
5569 JARGCP010000009.1 GCA_030418255.1_05569 CDS open 189081-189599 519_na     172_aa hypothetical protein
5570 JARGCP010000009.1 GCA_030418255.1_05570 CDS open 189563-190036 474_na     157_aa hypothetical protein
5571 JARGCP010000009.1 GCA_030418255.1_05571 CDS open 190192-190746 555_na     184_aa rutB_3 Peroxyureidoacrylateureidoacrylate amidohydrolase RutB
5572 JARGCP010000009.1 GCA_030418255.1_05572 CDS open 190875-191537 663_na     220_aa hypothetical protein
5573 JARGCP010000009.1 GCA_030418255.1_05573 CDS open 191665-192084 420_na     139_aa hypothetical protein
5574 JARGCP010000009.1 GCA_030418255.1_05574 CDS open 192089-192850 762_na     253_aa artP Arginine-binding extracellular protein ArtP
5575 JARGCP010000009.1 GCA_030418255.1_05575 CDS open 193064-194107 1044_na     347_aa hypothetical protein
5576 JARGCP010000009.1 GCA_030418255.1_05576 CDS open 194108-196624 2517_na     838_aa hrpB ATP-dependent RNA helicase HrpB
5577 JARGCP010000009.1 GCA_030418255.1_05577 CDS open 196755-197174 420_na     139_aa hypothetical protein
5578 JARGCP010000009.1 GCA_030418255.1_05578 CDS open 197176-197679 504_na     167_aa hypothetical protein
5579 JARGCP010000009.1 GCA_030418255.1_05579 CDS open 197676-198563 888_na     295_aa fieF Ferrous-iron efflux pump FieF
5580 JARGCP010000009.1 misc_RNA open 198618-198874 P24
5581 JARGCP010000009.1 GCA_030418255.1_05581 CDS open 198929-199408 480_na     159_aa decR_4 DNA-binding transcriptional activator DecR
5582 JARGCP010000009.1 GCA_030418255.1_05582 CDS open 199600-199803 204_na     67_aa hypothetical protein
5583 JARGCP010000009.1 GCA_030418255.1_05583 CDS open 199882-200274 393_na     130_aa hypothetical protein
5584 JARGCP010000009.1 GCA_030418255.1_05584 CDS open 200307-200939 633_na     210_aa rluE Ribosomal large subunit pseudouridine synthase E
5585 JARGCP010000009.1 GCA_030418255.1_05585 CDS open 200980-202104 1125_na     374_aa putative protein
5586 JARGCP010000009.1 GCA_030418255.1_05586 CDS open 202166-203638 1473_na     490_aa amn AMP nucleosidase
5587 JARGCP010000009.1 GCA_030418255.1_05587 CDS open 203764-204492 729_na     242_aa hypothetical protein
5588 JARGCP010000009.1 GCA_030418255.1_05588 CDS open 205134-205442 309_na     102_aa ygbF CRISPR-associated endoribonuclease Cas2
5589 JARGCP010000009.1 GCA_030418255.1_05589 CDS open 205442-206455 1014_na     337_aa ygbT CRISPR-associated endonuclease Cas1
5590 JARGCP010000009.1 GCA_030418255.1_05590 CDS open 206644-207255 612_na     203_aa cse3 CRISPR-associated endoribonuclease Cse3
5591 JARGCP010000009.1 GCA_030418255.1_05591 CDS open 207230-207901 672_na     223_aa hypothetical protein
5592 JARGCP010000009.1 GCA_030418255.1_05592 CDS open 207904-209037 1134_na     377_aa casC CRISPR system Cascade subunit CasC
5593 JARGCP010000009.1 GCA_030418255.1_05593 CDS open 209052-209573 522_na     173_aa cse2 CRISPR-associated protein Cse2
5594 JARGCP010000009.1 GCA_030418255.1_05594 CDS open 209570-211126 1557_na     518_aa cse1 CRISPR-associated protein CasACse1
5595 JARGCP010000009.1 GCA_030418255.1_05595 CDS open 211123-213810 2688_na     895_aa cas3 CRISPR-associated endonucleasehelicase Cas3
5596 JARGCP010000009.1 GCA_030418255.1_05596 CDS open 213956-214099 144_na     47_aa hypothetical protein
5597 JARGCP010000009.1 GCA_030418255.1_05597 CDS open 214218-215369 1152_na     383_aa ycaD_3 putative MFS-type transporter YcaD
5598 JARGCP010000009.1 GCA_030418255.1_05598 CDS open 215938-217587 1650_na     549_aa aidB Putative acyl-CoA dehydrogenase AidB
5599 JARGCP010000009.1 GCA_030418255.1_05599 CDS open 217584-218234 651_na     216_aa hypothetical protein
5600 JARGCP010000009.1 GCA_030418255.1_05600 CDS open 218340-220730 2391_na     796_aa rcsC_26 Sensor histidine kinase RcsC
5601 JARGCP010000009.1 GCA_030418255.1_05601 CDS open 220996-221793 798_na     265_aa thiD Hydroxymethylpyrimidinephosphomethylpyrimidine kinase
5602 JARGCP010000009.1 GCA_030418255.1_05602 CDS open 221790-222419 630_na     209_aa thiE_2 Thiamine-phosphate synthase
5603 JARGCP010000009.1 GCA_030418255.1_05603 CDS open 222452-223741 1290_na     429_aa hemL_2 Glutamate-1-semialdehyde 2%2C1-aminomutase
5604 JARGCP010000009.1 GCA_030418255.1_05604 CDS open 223916-224464 549_na     182_aa hypothetical protein
5605 JARGCP010000009.1 GCA_030418255.1_05605 CDS open 224477-224809 333_na     110_aa hypothetical protein
5606 JARGCP010000009.1 GCA_030418255.1_05606 CDS open 224938-226278 1341_na     446_aa miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
5607 JARGCP010000009.1 GCA_030418255.1_05607 CDS open 226366-227385 1020_na     339_aa ybeZ PhoH-like protein
5608 JARGCP010000009.1 GCA_030418255.1_05608 CDS open 227378-227836 459_na     152_aa ybeY Endoribonuclease YbeY
5609 JARGCP010000009.1 GCA_030418255.1_05609 CDS open 227856-228695 840_na     279_aa corC Magnesium and cobalt efflux protein CorC
5610 JARGCP010000009.1 GCA_030418255.1_05610 CDS open 228789-230309 1521_na     506_aa lnt Apolipoprotein N-acyltransferase
5611 JARGCP010000009.1 GCA_030418255.1_05611 CDS open 230316-231098 783_na     260_aa hypothetical protein
5612 JARGCP010000009.1 GCA_030418255.1_05612 CDS open 231123-231575 453_na     150_aa hypothetical protein
5613 JARGCP010000009.1 GCA_030418255.1_05613 CDS open 231807-234428 2622_na     873_aa leuS Leucine--tRNA ligase
5614 JARGCP010000009.1 GCA_030418255.1_05614 CDS open 234484-235095 612_na     203_aa lptE LPS-assembly lipoprotein LptE
5615 JARGCP010000009.1 GCA_030418255.1_05615 CDS open 235142-236179 1038_na     345_aa holA DNA polymerase III subunit delta
5616 JARGCP010000009.1 GCA_030418255.1_05616 CDS open 236255-236407 153_na     50_aa hypothetical protein
5617 JARGCP010000009.1 GCA_030418255.1_05617 CDS open 236465-237787 1323_na     440_aa Tn3 family transposase TnXax1
5618 JARGCP010000009.1 GCA_030418255.1_05618 CDS open 237912-238964 1053_na     350_aa LIAS Lipoyl synthase%2C organellar chromatophore
5619 JARGCP010000009.1 GCA_030418255.1_05619 CDS open 239034-239657 624_na     207_aa lipB Octanoyltransferase
5620 JARGCP010000009.1 GCA_030418255.1_05620 CDS open 239657-239935 279_na     92_aa hypothetical protein
5621 JARGCP010000009.1 GCA_030418255.1_05621 CDS open 240025-241188 1164_na     387_aa dacC D-alanyl-D-alanine carboxypeptidase DacC
5622 JARGCP010000009.1 GCA_030418255.1_05622 CDS open 241285-242295 1011_na     336_aa rlpA_2 Endolytic peptidoglycan transglycosylase RlpA
5623 JARGCP010000009.1 GCA_030418255.1_05623 CDS open 242299-243288 990_na     329_aa mltB Membrane-bound lytic murein transglycosylase B
5624 JARGCP010000009.1 GCA_030418255.1_05624 CDS open 243324-244469 1146_na     381_aa mrdB Peptidoglycan glycosyltransferase MrdB
5625 JARGCP010000009.1 GCA_030418255.1_05625 CDS open 244466-246367 1902_na     633_aa mrdA Peptidoglycan D%2CD-transpeptidase MrdA
5626 JARGCP010000009.1 GCA_030418255.1_05626 CDS open 246377-246844 468_na     155_aa rlmH Ribosomal RNA large subunit methyltransferase H
5627 JARGCP010000009.1 GCA_030418255.1_05627 CDS open 246857-247210 354_na     117_aa rsfS Ribosomal silencing factor RsfS
5628 JARGCP010000009.1 GCA_030418255.1_05628 CDS open 247233-247877 645_na     214_aa nadD_2 putative nicotinate-nucleotide adenylyltransferase
5629 JARGCP010000009.1 GCA_030418255.1_05629 CDS open 247877-249142 1266_na     421_aa proA Gamma-glutamyl phosphate reductase
5630 JARGCP010000009.1 GCA_030418255.1_05630 CDS open 249442-250665 1224_na     407_aa menH_3 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase
5631 JARGCP010000009.1 GCA_030418255.1_05631 CDS open 250684-251544 861_na     286_aa hypothetical protein
5632 JARGCP010000009.1 GCA_030418255.1_05632 CDS open 251658-252368 711_na     236_aa Putative 3-methyladenine DNA glycosylase
5633 JARGCP010000009.1 GCA_030418255.1_05633 CDS open 252365-253684 1320_na     439_aa hypothetical protein
5634 JARGCP010000009.1 GCA_030418255.1_05634 CDS open 253726-254319 594_na     197_aa hypothetical protein
5635 JARGCP010000009.1 GCA_030418255.1_05635 CDS open 254330-255046 717_na     238_aa yohK_2 Inner membrane protein YohK
5636 JARGCP010000009.1 GCA_030418255.1_05636 CDS open 255043-255402 360_na     119_aa cidA_2 Holin-like protein CidA
5637 JARGCP010000009.1 GCA_030418255.1_05637 CDS open 255636-256091 456_na     151_aa putative enoyl-CoA hydratase 1
5638 JARGCP010000009.1 GCA_030418255.1_05638 CDS open 256211-256423 213_na     70_aa hypothetical protein
5639 JARGCP010000009.1 GCA_030418255.1_05639 CDS open 256509-258233 1725_na     574_aa hypothetical protein
5640 JARGCP010000009.1 GCA_030418255.1_05640 CDS open 258266-258907 642_na     213_aa hypothetical protein
5641 JARGCP010000009.1 GCA_030418255.1_05641 CDS open 258999-259610 612_na     203_aa COQ5_2 2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase%2C mitochondrial
5642 JARGCP010000009.1 GCA_030418255.1_05642 CDS open 259668-260534 867_na     288_aa ytnP putative quorum-quenching lactonase YtnP
5643 JARGCP010000009.1 GCA_030418255.1_05643 CDS open 260557-261024 468_na     155_aa hypothetical protein
5644 JARGCP010000009.1 GCA_030418255.1_05644 CDS open 261096-261383 288_na     95_aa hypothetical protein
5645 JARGCP010000009.1 GCA_030418255.1_05645 CDS open 261376-262005 630_na     209_aa ubiX Flavin prenyltransferase UbiX
5646 JARGCP010000009.1 GCA_030418255.1_05646 CDS open 262007-263359 1353_na     450_aa mpl UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2%2C6-diaminoheptandioate ligase
5647 JARGCP010000009.1 GCA_030418255.1_05647 CDS open 263602-264819 1218_na     405_aa mshA_3 D-inositol-3-phosphate glycosyltransferase
5648 JARGCP010000009.1 GCA_030418255.1_05648 CDS open 267628-268500 873_na     290_aa cmpR_8 HTH-type transcriptional activator CmpR
5649 JARGCP010000009.1 GCA_030418255.1_05649 CDS open 268621-269790 1170_na     389_aa phnW 2-aminoethylphosphonate--pyruvate transaminase
5650 JARGCP010000009.1 GCA_030418255.1_05650 CDS open 269979-271304 1326_na     441_aa uhpC Membrane sensor protein UhpC
5651 JARGCP010000009.1 GCA_030418255.1_05651 CDS open 271324-272151 828_na     275_aa phnX_3 Phosphonoacetaldehyde hydrolase
5652 JARGCP010000009.1 GCA_030418255.1_05652 CDS open 272374-274278 1905_na     634_aa acoR_3 Acetoin catabolism regulatory protein