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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Pseudomonas fluorescens (GCA_900215245.1)

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PROKKA Annotations for GCA_900215245.1
Genome Selected: Pseudomonas fluorescens
ContigsBases CDSrRNA tmRNAtRNA
1 6511547 5879 19 1 69
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:13]    |    Number of Records Found: 6077 [13 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  10  11  12  13  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
6001 LT907842.1 GCA_900215245.1_06001 CDS open 6430883-6431551 669_na     222_aa putative ABC transporter ATP-binding protein
6002 LT907842.1 GCA_900215245.1_06002 CDS open 6431826-6432500 675_na     224_aa ais_2 Lipopolysaccharide core heptose(II)-phosphate phosphatase
6003 LT907842.1 GCA_900215245.1_06003 CDS open 6432690-6434345 1656_na     551_aa arnT_3 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase
6004 LT907842.1 GCA_900215245.1_06004 CDS open 6434372-6435889 1518_na     505_aa arnT_4 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase
6005 LT907842.1 GCA_900215245.1_06005 CDS open 6435945-6442214 6270_na     2089_aa tycC_2 Tyrocidine synthase 3
6006 LT907842.1 GCA_900215245.1_06006 CDS open 6442701-6443495 795_na     264_aa hypothetical protein
6007 LT907842.1 GCA_900215245.1_06007 CDS open 6443495-6444964 1470_na     489_aa ttgC_5 putative efflux pump outer membrane protein TtgC
6008 LT907842.1 GCA_900215245.1_06008 CDS open 6445003-6445875 873_na     290_aa hcaR_3 Hca operon transcriptional activator HcaR
6009 LT907842.1 GCA_900215245.1_06009 CDS open 6446010-6446783 774_na     257_aa gno Gluconate 5-dehydrogenase
6010 LT907842.1 GCA_900215245.1_06010 CDS open 6446797-6447849 1053_na     350_aa idnD L-idonate 5-dehydrogenase (NAD(P)(+))
6011 LT907842.1 GCA_900215245.1_06011 CDS open 6447853-6448644 792_na     263_aa fetB putative iron export permease protein FetB
6012 LT907842.1 GCA_900215245.1_06012 CDS open 6448641-6449318 678_na     225_aa fetA putative iron export ATP-binding protein FetA
6013 LT907842.1 GCA_900215245.1_06013 CDS open 6449451-6449606 156_na     51_aa hypothetical protein
6014 LT907842.1 GCA_900215245.1_06014 CDS open 6449576-6450526 951_na     316_aa yajO_3 1-deoxyxylulose-5-phosphate synthase YajO
6015 LT907842.1 GCA_900215245.1_06015 CDS open 6450794-6451999 1206_na     401_aa hypothetical protein
6016 LT907842.1 GCA_900215245.1_06016 CDS open 6452007-6452528 522_na     173_aa hypothetical protein
6017 LT907842.1 GCA_900215245.1_06017 CDS open 6452735-6453418 684_na     227_aa lpfB_1 putative fimbrial chaperone LpfB
6018 LT907842.1 GCA_900215245.1_06018 CDS open 6453442-6454422 981_na     326_aa hypothetical protein
6019 LT907842.1 GCA_900215245.1_06019 CDS open 6454480-6457278 2799_na     932_aa rcsC_23 Sensor histidine kinase RcsC
6020 LT907842.1 GCA_900215245.1_06020 CDS open 6457265-6458458 1194_na     397_aa rcsC_24 Sensor histidine kinase RcsC
6021 LT907842.1 GCA_900215245.1_06021 CDS open 6458542-6461715 3174_na     1057_aa rcsC_25 Sensor histidine kinase RcsC
6022 LT907842.1 GCA_900215245.1_06022 CDS open 6461739-6462386 648_na     215_aa rcsB_2 Transcriptional regulatory protein RcsB
6023 LT907842.1 GCA_900215245.1_06023 CDS open 6462582-6463184 603_na     200_aa hypothetical protein
6024 LT907842.1 GCA_900215245.1_06024 CDS open 6463259-6463990 732_na     243_aa lpfB_2 putative fimbrial chaperone LpfB
6025 LT907842.1 GCA_900215245.1_06025 CDS open 6464076-6466586 2511_na     836_aa fimD Outer membrane usher protein FimD
6026 LT907842.1 GCA_900215245.1_06026 CDS open 6466700-6466906 207_na     68_aa hcp1_2 Protein hcp1
6027 LT907842.1 GCA_900215245.1_06027 CDS open 6467090-6467647 558_na     185_aa hypothetical protein
6028 LT907842.1 GCA_900215245.1_06028 CDS open 6467786-6468943 1158_na     385_aa hypothetical protein
6029 LT907842.1 GCA_900215245.1_06029 CDS open 6468995-6469429 435_na     144_aa amnD 2-aminomuconate deaminase
6030 LT907842.1 GCA_900215245.1_06030 CDS open 6469441-6471024 1584_na     527_aa L-amino acid oxidase
6031 LT907842.1 GCA_900215245.1_06031 CDS open 6471035-6471961 927_na     308_aa hypothetical protein
6032 LT907842.1 GCA_900215245.1_06032 CDS open 6471980-6472753 774_na     257_aa glnQ_10 Glutamine transport ATP-binding protein GlnQ
6033 LT907842.1 GCA_900215245.1_06033 CDS open 6472746-6473717 972_na     323_aa hypothetical protein
6034 LT907842.1 GCA_900215245.1_06034 CDS open 6473743-6476136 2394_na     797_aa btuB_8 Vitamin B12 transporter BtuB
6035 LT907842.1 GCA_900215245.1_06035 CDS open 6476543-6477334 792_na     263_aa fecE_2 Fe(3+) dicitrate transport ATP-binding protein FecE
6036 LT907842.1 GCA_900215245.1_06036 CDS open 6477339-6478307 969_na     322_aa fecD Fe(3+) dicitrate transport system permease protein FecD
6037 LT907842.1 GCA_900215245.1_06037 CDS open 6478304-6479293 990_na     329_aa fecC Fe(3+) dicitrate transport system permease protein FecC
6038 LT907842.1 GCA_900215245.1_06038 CDS open 6479296-6480216 921_na     306_aa fecB Fe(3+) dicitrate-binding periplasmic protein
6039 LT907842.1 GCA_900215245.1_06039 CDS open 6480381-6482786 2406_na     801_aa fcuA_2 Ferrichrome receptor FcuA
6040 LT907842.1 GCA_900215245.1_06040 CDS open 6482965-6483594 630_na     209_aa dapH_3 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase
6041 LT907842.1 tRNA open 6483663-6483739 tRNA-Pro(ggg)
6042 LT907842.1 GCA_900215245.1_06042 CDS open 6483830-6484186 357_na     118_aa hypothetical protein
6043 LT907842.1 GCA_900215245.1_06043 CDS open 6484167-6484469 303_na     100_aa ihfA Integration host factor subunit alpha
6044 LT907842.1 GCA_900215245.1_06044 CDS open 6484473-6486851 2379_na     792_aa pheT Phenylalanine--tRNA ligase beta subunit
6045 LT907842.1 GCA_900215245.1_06045 CDS open 6486878-6487894 1017_na     338_aa pheS Phenylalanine--tRNA ligase alpha subunit
6046 LT907842.1 GCA_900215245.1_06046 CDS open 6488004-6488360 357_na     118_aa rplT 50S ribosomal protein L20
6047 LT907842.1 GCA_900215245.1_06047 CDS open 6488391-6488585 195_na     64_aa rpmI 50S ribosomal protein L35
6048 LT907842.1 GCA_900215245.1_06048 CDS open 6488646-6489179 534_na     177_aa infC Translation initiation factor IF-3
6049 LT907842.1 GCA_900215245.1_06049 CDS open 6489197-6491119 1923_na     640_aa thrS Threonine--tRNA ligase
6050 LT907842.1 GCA_900215245.1_06050 CDS open 6491491-6491805 315_na     104_aa hypothetical protein
6051 LT907842.1 GCA_900215245.1_06051 CDS open 6492095-6492307 213_na     70_aa capB_3 Cold shock protein CapB
6052 LT907842.1 GCA_900215245.1_06052 CDS open 6492381-6492701 321_na     106_aa hypothetical protein
6053 LT907842.1 GCA_900215245.1_06053 CDS open 6492845-6493153 309_na     102_aa hypothetical protein
6054 LT907842.1 GCA_900215245.1_06054 CDS open 6493326-6493538 213_na     70_aa hypothetical protein
6055 LT907842.1 GCA_900215245.1_06055 CDS open 6493572-6494600 1029_na     342_aa rihA Pyrimidine-specific ribonucleoside hydrolase RihA
6056 LT907842.1 GCA_900215245.1_06056 CDS open 6494627-6495031 405_na     134_aa rbsD D-ribose pyranase
6057 LT907842.1 GCA_900215245.1_06057 CDS open 6495028-6495909 882_na     293_aa rbsK_3 Ribokinase
6058 LT907842.1 GCA_900215245.1_06058 CDS open 6495969-6496991 1023_na     340_aa purR HTH-type transcriptional repressor PurR
6059 LT907842.1 GCA_900215245.1_06059 CDS open 6496995-6497972 978_na     325_aa rbsC_5 Ribose import permease protein RbsC
6060 LT907842.1 GCA_900215245.1_06060 CDS open 6497969-6499522 1554_na     517_aa araG_3 Arabinose import ATP-binding protein AraG
6061 LT907842.1 GCA_900215245.1_06061 CDS open 6499581-6500540 960_na     319_aa rbsB_2 Ribose import binding protein RbsB
6062 LT907842.1 GCA_900215245.1_06062 CDS open 6501096-6502184 1089_na     362_aa ansB Glutaminase-asparaginase
6063 LT907842.1 GCA_900215245.1_06063 CDS open 6502373-6502624 252_na     83_aa hypothetical protein
6064 LT907842.1 GCA_900215245.1_06064 CDS open 6502629-6503318 690_na     229_aa dns Extracellular deoxyribonuclease
6065 LT907842.1 GCA_900215245.1_06065 CDS open 6503350-6503730 381_na     126_aa hypothetical protein
6066 LT907842.1 GCA_900215245.1_06066 CDS open 6503978-6504172 195_na     64_aa csrA1_2 Translational regulator CsrA1
6067 LT907842.1 GCA_900215245.1_06067 CDS open 6504383-6504646 264_na     87_aa hypothetical protein
6068 LT907842.1 GCA_900215245.1_06068 CDS open 6504705-6505022 318_na     105_aa hypothetical protein
6069 LT907842.1 GCA_900215245.1_06069 CDS open 6505057-6505734 678_na     225_aa hxpA Hexitol phosphatase A
6070 LT907842.1 GCA_900215245.1_06070 CDS open 6505955-6506725 771_na     256_aa hypothetical protein
6071 LT907842.1 GCA_900215245.1_06071 CDS open 6506838-6507098 261_na     86_aa hypothetical protein
6072 LT907842.1 GCA_900215245.1_06072 CDS open 6507141-6507812 672_na     223_aa czcR_5 Transcriptional activator protein CzcR
6073 LT907842.1 GCA_900215245.1_06073 CDS open 6507809-6509209 1401_na     466_aa sasA_22 Adaptive-response sensory-kinase SasA
6074 LT907842.1 GCA_900215245.1_06074 CDS open 6509423-6509647 225_na     74_aa hypothetical protein
6075 LT907842.1 GCA_900215245.1_06075 CDS open 6509654-6510295 642_na     213_aa pcp Pyrrolidone-carboxylate peptidase
6076 LT907842.1 GCA_900215245.1_06076 CDS open 6510308-6510886 579_na     192_aa hypothetical protein
6077 LT907842.1 GCA_900215245.1_06077 CDS open 6511005-6511250 246_na     81_aa hypothetical protein