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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Prevotella nigrescens (GCA_905372985.1)

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PROKKA Annotations for GCA_905372985.1
Genome Selected: Prevotella nigrescens
ContigsBases CDSrRNA tmRNAtRNA
92 2,490,701 2111 0 1 31
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:5]    |    Number of Records Found: 2150 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 CAJPQZ010000063.1 GCA_905372985.1_02001 CDS open 1883-2773 891_na     296_aa hypothetical protein
2002 CAJPQZ010000063.1 GCA_905372985.1_02002 CDS open 3275-3517 243_na     80_aa hypothetical protein
2003 CAJPQZ010000063.1 GCA_905372985.1_02003 CDS open 3669-5741 2073_na     690_aa btuB_6 Vitamin B12 transporter BtuB
2004 CAJPQZ010000063.1 GCA_905372985.1_02004 CDS open 6036-6608 573_na     190_aa xpt Xanthine phosphoribosyltransferase
2005 CAJPQZ010000063.1 GCA_905372985.1_02005 CDS open 6614-7957 1344_na     447_aa xanP Xanthine permease XanP
2006 CAJPQZ010000063.1 GCA_905372985.1_02006 CDS open 8051-8527 477_na     158_aa hypothetical protein
2007 CAJPQZ010000064.1 GCA_905372985.1_02007 CDS open 310-495 186_na     61_aa hypothetical protein
2008 CAJPQZ010000064.1 GCA_905372985.1_02008 CDS open 590-1606 1017_na     338_aa hypothetical protein
2009 CAJPQZ010000064.1 GCA_905372985.1_02009 CDS open 2962-3741 780_na     259_aa zupT Zinc transporter ZupT
2010 CAJPQZ010000064.1 GCA_905372985.1_02010 CDS open 3848-4498 651_na     216_aa czcD Metal cation efflux system protein CzcD
2011 CAJPQZ010000064.1 GCA_905372985.1_02011 CDS open 4588-5373 786_na     261_aa ycsE 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YcsE
2012 CAJPQZ010000064.1 GCA_905372985.1_02012 CDS open 5574-8729 3156_na     1051_aa hypothetical protein
2013 CAJPQZ010000065.1 GCA_905372985.1_02013 CDS open 11-349 339_na     112_aa hypothetical protein
2014 CAJPQZ010000065.1 GCA_905372985.1_02014 CDS open 487-996 510_na     169_aa dps DNA protection during starvation protein
2015 CAJPQZ010000065.1 GCA_905372985.1_02015 CDS open 1284-1559 276_na     91_aa rpsO 30S ribosomal protein S15
2016 CAJPQZ010000065.1 GCA_905372985.1_02016 CDS open 1764-3566 1803_na     600_aa typA GTP-binding protein TypABipA
2017 CAJPQZ010000065.1 GCA_905372985.1_02017 CDS open 3675-4364 690_na     229_aa hypothetical protein
2018 CAJPQZ010000065.1 GCA_905372985.1_02018 CDS open 4660-6144 1485_na     494_aa hypothetical protein
2019 CAJPQZ010000065.1 GCA_905372985.1_02019 CDS open 6329-6817 489_na     162_aa luxS S-ribosylhomocysteine lyase
2020 CAJPQZ010000065.1 GCA_905372985.1_02020 CDS open 6832-7530 699_na     232_aa mtnN 5-methylthioadenosineS-adenosylhomocysteine nucleosidase
2021 CAJPQZ010000066.1 GCA_905372985.1_02021 CDS open 1655-1804 150_na     49_aa hypothetical protein
2022 CAJPQZ010000066.1 GCA_905372985.1_02022 CDS open 1929-3704 1776_na     591_aa rpsA 30S ribosomal protein S1
2023 CAJPQZ010000066.1 GCA_905372985.1_02023 CDS open 3877-4806 930_na     309_aa hypothetical protein
2024 CAJPQZ010000066.1 GCA_905372985.1_02024 CDS open 4988-7321 2334_na     777_aa hypothetical protein
2025 CAJPQZ010000067.1 GCA_905372985.1_02025 CDS open 434-3913 3480_na     1159_aa mfd Transcription-repair-coupling factor
2026 CAJPQZ010000067.1 GCA_905372985.1_02026 CDS open 3993-4454 462_na     153_aa hypothetical protein
2027 CAJPQZ010000067.1 GCA_905372985.1_02027 CDS open 5308-6390 1083_na     360_aa hypothetical protein
2028 CAJPQZ010000067.1 GCA_905372985.1_02028 CDS open 6514-7875 1362_na     453_aa dapE_2 Succinyl-diaminopimelate desuccinylase
2029 CAJPQZ010000067.1 GCA_905372985.1_02029 CDS open 7896-7985 90_na     29_aa hypothetical protein
2030 CAJPQZ010000068.1 GCA_905372985.1_02030 CDS open 36-500 465_na     154_aa hypothetical protein
2031 CAJPQZ010000068.1 GCA_905372985.1_02031 CDS open 647-2308 1662_na     553_aa udk_2 Uridine kinase
2032 CAJPQZ010000068.1 GCA_905372985.1_02032 CDS open 2402-4111 1710_na     569_aa hypothetical protein
2033 CAJPQZ010000068.1 GCA_905372985.1_02033 CDS open 4163-5008 846_na     281_aa folP Dihydropteroate synthase
2034 CAJPQZ010000068.1 GCA_905372985.1_02034 CDS open 5049-5825 777_na     258_aa cdaA Cyclic di-AMP synthase CdaA
2035 CAJPQZ010000068.1 GCA_905372985.1_02035 CDS open 6311-6847 537_na     178_aa Putative cytokinin riboside 5-monophosphate phosphoribohydrolase
2036 CAJPQZ010000068.1 GCA_905372985.1_02036 CDS open 6910-7464 555_na     184_aa hypothetical protein
2037 CAJPQZ010000069.1 GCA_905372985.1_02037 CDS open 924-1151 228_na     75_aa hypothetical protein
2038 CAJPQZ010000069.1 GCA_905372985.1_02038 CDS open 1519-2001 483_na     160_aa asnC_2 Regulatory protein AsnC
2039 CAJPQZ010000069.1 GCA_905372985.1_02039 CDS open 2109-3809 1701_na     566_aa hypothetical protein
2040 CAJPQZ010000069.1 GCA_905372985.1_02040 CDS open 3966-4457 492_na     163_aa hypothetical protein
2041 CAJPQZ010000069.1 GCA_905372985.1_02041 CDS open 4480-5088 609_na     202_aa recR Recombination protein RecR
2042 CAJPQZ010000069.1 GCA_905372985.1_02042 CDS open 5093-5536 444_na     147_aa hypothetical protein
2043 CAJPQZ010000069.1 GCA_905372985.1_02043 CDS open 5548-6744 1197_na     398_aa hypothetical protein
2044 CAJPQZ010000069.1 GCA_905372985.1_02044 CDS open 6774-7253 480_na     159_aa speG Spermidine N(1)-acetyltransferase
2045 CAJPQZ010000069.1 tRNA open 7338-7408 tRNA-Asp(gtc)
2046 CAJPQZ010000070.1 GCA_905372985.1_02046 CDS open 122-658 537_na     178_aa rplI 50S ribosomal protein L9
2047 CAJPQZ010000070.1 GCA_905372985.1_02047 CDS open 756-1829 1074_na     357_aa hypothetical protein
2048 CAJPQZ010000070.1 GCA_905372985.1_02048 CDS open 1959-2657 699_na     232_aa infC Translation initiation factor IF-3
2049 CAJPQZ010000070.1 GCA_905372985.1_02049 CDS open 2611-2763 153_na     50_aa hypothetical protein
2050 CAJPQZ010000070.1 GCA_905372985.1_02050 CDS open 2769-2966 198_na     65_aa rpmI 50S ribosomal protein L35
2051 CAJPQZ010000070.1 GCA_905372985.1_02051 CDS open 3004-3348 345_na     114_aa rplT 50S ribosomal protein L20
2052 CAJPQZ010000070.1 GCA_905372985.1_02052 CDS open 3440-5593 2154_na     717_aa yhgF Protein YhgF
2053 CAJPQZ010000070.1 GCA_905372985.1_02053 CDS open 5685-5849 165_na     54_aa hypothetical protein
2054 CAJPQZ010000070.1 GCA_905372985.1_02054 CDS open 6437-6874 438_na     145_aa hypothetical protein
2055 CAJPQZ010000071.1 GCA_905372985.1_02055 CDS open 279-2972 2694_na     897_aa hypothetical protein
2056 CAJPQZ010000071.1 GCA_905372985.1_02056 CDS open 2992-3930 939_na     312_aa hypothetical protein
2057 CAJPQZ010000071.1 GCA_905372985.1_02057 CDS open 3927-4421 495_na     164_aa hypothetical protein
2058 CAJPQZ010000071.1 GCA_905372985.1_02058 CDS open 4500-4727 228_na     75_aa hypothetical protein
2059 CAJPQZ010000071.1 GCA_905372985.1_02059 CDS open 4768-5610 843_na     280_aa hypothetical protein
2060 CAJPQZ010000071.1 GCA_905372985.1_02060 CDS open 5628-6797 1170_na     389_aa patB Cystathionine beta-lyase PatB
2061 CAJPQZ010000072.1 GCA_905372985.1_02061 CDS open 159-1040 882_na     293_aa hypothetical protein
2062 CAJPQZ010000072.1 GCA_905372985.1_02062 CDS open 1193-2617 1425_na     474_aa ffh Signal recognition particle protein
2063 CAJPQZ010000072.1 GCA_905372985.1_02063 CDS open 2660-3544 885_na     294_aa folD Bifunctional protein FolD protein
2064 CAJPQZ010000072.1 GCA_905372985.1_02064 CDS open 3646-3825 180_na     59_aa hypothetical protein
2065 CAJPQZ010000072.1 GCA_905372985.1_02065 CDS open 3839-4072 234_na     77_aa rsxB_2 Ion-translocating oxidoreductase complex subunit B
2066 CAJPQZ010000072.1 GCA_905372985.1_02066 CDS open 4075-5160 1086_na     361_aa korA_2 2-oxoglutarate oxidoreductase subunit KorA
2067 CAJPQZ010000072.1 GCA_905372985.1_02067 CDS open 5178-5948 771_na     256_aa korB_2 2-oxoglutarate oxidoreductase subunit KorB
2068 CAJPQZ010000072.1 GCA_905372985.1_02068 CDS open 5971-6516 546_na     181_aa hypothetical protein
2069 CAJPQZ010000073.1 GCA_905372985.1_02069 CDS open 225-776 552_na     183_aa hypothetical protein
2070 CAJPQZ010000073.1 GCA_905372985.1_02070 CDS open 770-1318 549_na     182_aa hypothetical protein
2071 CAJPQZ010000073.1 GCA_905372985.1_02071 CDS open 1430-1537 108_na     35_aa hypothetical protein
2072 CAJPQZ010000073.1 GCA_905372985.1_02072 CDS open 1689-3245 1557_na     518_aa hypothetical protein
2073 CAJPQZ010000073.1 GCA_905372985.1_02073 CDS open 3385-4686 1302_na     433_aa hypothetical protein
2074 CAJPQZ010000073.1 GCA_905372985.1_02074 CDS open 4683-5168 486_na     161_aa hypothetical protein
2075 CAJPQZ010000074.1 GCA_905372985.1_02075 CDS open 21-413 393_na     130_aa hypothetical protein
2076 CAJPQZ010000074.1 GCA_905372985.1_02076 CDS open 424-1131 708_na     235_aa hypothetical protein
2077 CAJPQZ010000074.1 GCA_905372985.1_02077 CDS open 1128-1247 120_na     39_aa hypothetical protein
2078 CAJPQZ010000074.1 GCA_905372985.1_02078 CDS open 1205-1648 444_na     147_aa hypothetical protein
2079 CAJPQZ010000074.1 GCA_905372985.1_02079 CDS open 1812-2720 909_na     302_aa pyrD Dihydroorotate dehydrogenase B (NAD(+))%2C catalytic subunit
2080 CAJPQZ010000074.1 GCA_905372985.1_02080 CDS open 2792-3565 774_na     257_aa pyrK_2 Dihydroorotate dehydrogenase B (NAD(+))%2C electron transfer subunit
2081 CAJPQZ010000074.1 GCA_905372985.1_02081 CDS open 4002-4439 438_na     145_aa hypothetical protein
2082 CAJPQZ010000074.1 GCA_905372985.1_02082 CDS open 4706-4822 117_na     38_aa hypothetical protein
2083 CAJPQZ010000074.1 GCA_905372985.1_02083 CDS open 5353-5868 516_na     171_aa hypothetical protein
2084 CAJPQZ010000075.1 GCA_905372985.1_02084 CDS open 516-1763 1248_na     415_aa hypothetical protein
2085 CAJPQZ010000075.1 GCA_905372985.1_02085 CDS open 2189-2713 525_na     174_aa hypothetical protein
2086 CAJPQZ010000075.1 GCA_905372985.1_02086 CDS open 2866-3525 660_na     219_aa hypothetical protein
2087 CAJPQZ010000075.1 GCA_905372985.1_02087 CDS open 3592-4287 696_na     231_aa hypothetical protein
2088 CAJPQZ010000075.1 GCA_905372985.1_02088 CDS open 4438-4530 93_na     30_aa hypothetical protein
2089 CAJPQZ010000075.1 GCA_905372985.1_02089 CDS open 4625-5311 687_na     228_aa hypothetical protein
2090 CAJPQZ010000075.1 GCA_905372985.1_02090 CDS open 5631-5759 129_na     42_aa hypothetical protein
2091 CAJPQZ010000076.1 GCA_905372985.1_02091 CDS open 200-445 246_na     81_aa hypothetical protein
2092 CAJPQZ010000076.1 GCA_905372985.1_02092 CDS open 344-1651 1308_na     435_aa eno Enolase
2093 CAJPQZ010000076.1 GCA_905372985.1_02093 CDS open 1683-1874 192_na     63_aa hypothetical protein
2094 CAJPQZ010000076.1 GCA_905372985.1_02094 CDS open 1989-2915 927_na     308_aa oxyR Hydrogen peroxide-inducible genes activator
2095 CAJPQZ010000076.1 GCA_905372985.1_02095 CDS open 3035-3736 702_na     233_aa hypothetical protein
2096 CAJPQZ010000076.1 GCA_905372985.1_02096 CDS open 3951-4604 654_na     217_aa dnaJ_2 Chaperone protein DnaJ
2097 CAJPQZ010000076.1 GCA_905372985.1_02097 CDS open 4729-5766 1038_na     345_aa nspC Carboxynorspermidinecarboxyspermidine decarboxylase
2098 CAJPQZ010000077.1 GCA_905372985.1_02098 CDS open 168-308 141_na     46_aa hypothetical protein
2099 CAJPQZ010000077.1 GCA_905372985.1_02099 CDS open 318-1616 1299_na     432_aa hypothetical protein
2100 CAJPQZ010000077.1 misc_RNA open 1772-1871 TPP
2101 CAJPQZ010000077.1 GCA_905372985.1_02101 CDS open 1953-2774 822_na     273_aa thiD Hydroxymethylpyrimidinephosphomethylpyrimidine kinase
2102 CAJPQZ010000077.1 GCA_905372985.1_02102 CDS open 2771-3385 615_na     204_aa thiE_2 Thiamine-phosphate synthase
2103 CAJPQZ010000077.1 GCA_905372985.1_02103 CDS open 3390-4970 1581_na     526_aa thiC Phosphomethylpyrimidine synthase
2104 CAJPQZ010000078.1 GCA_905372985.1_02104 CDS open 460-828 369_na     122_aa hypothetical protein
2105 CAJPQZ010000078.1 GCA_905372985.1_02105 CDS open 813-1463 651_na     216_aa hypothetical protein
2106 CAJPQZ010000078.1 GCA_905372985.1_02106 CDS open 2175-5195 3021_na     1006_aa hypothetical protein
2107 CAJPQZ010000079.1 GCA_905372985.1_02107 CDS open 371-2092 1722_na     573_aa hypothetical protein
2108 CAJPQZ010000079.1 GCA_905372985.1_02108 CDS open 2242-3042 801_na     266_aa ermD rRNA adenine N-6-methyltransferase
2109 CAJPQZ010000079.1 GCA_905372985.1_02109 CDS open 3267-4217 951_na     316_aa IS30 family transposase IS4351
2110 CAJPQZ010000079.1 GCA_905372985.1_02110 CDS open 4214-4471 258_na     85_aa hypothetical protein
2111 CAJPQZ010000080.1 GCA_905372985.1_02111 CDS open 285-653 369_na     122_aa dfx Desulfoferrodoxin
2112 CAJPQZ010000080.1 GCA_905372985.1_02112 CDS open 754-1668 915_na     304_aa hypothetical protein
2113 CAJPQZ010000080.1 GCA_905372985.1_02113 CDS open 1665-2396 732_na     243_aa hypothetical protein
2114 CAJPQZ010000080.1 GCA_905372985.1_02114 CDS open 2393-2896 504_na     167_aa hypothetical protein
2115 CAJPQZ010000080.1 GCA_905372985.1_02115 CDS open 3093-3539 447_na     148_aa hypothetical protein
2116 CAJPQZ010000080.1 GCA_905372985.1_02116 CDS open 3671-4552 882_na     293_aa hypothetical protein
2117 CAJPQZ010000081.1 GCA_905372985.1_02117 CDS open 281-1624 1344_na     447_aa hldE Bifunctional protein HldE
2118 CAJPQZ010000081.1 GCA_905372985.1_02118 CDS open 1631-2710 1080_na     359_aa Serine-pyruvate aminotransferase
2119 CAJPQZ010000081.1 GCA_905372985.1_02119 CDS open 2805-3854 1050_na     349_aa hypothetical protein
2120 CAJPQZ010000081.1 GCA_905372985.1_02120 CDS open 4240-4794 555_na     184_aa envC Murein hydrolase activator EnvC
2121 CAJPQZ010000082.1 GCA_905372985.1_02121 CDS open 191-2068 1878_na     625_aa mnmG tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
2122 CAJPQZ010000082.1 GCA_905372985.1_02122 CDS open 2127-2657 531_na     176_aa apt Adenine phosphoribosyltransferase
2123 CAJPQZ010000083.1 GCA_905372985.1_02123 CDS open 19-285 267_na     88_aa hypothetical protein
2124 CAJPQZ010000083.1 GCA_905372985.1_02124 CDS open 255-539 285_na     94_aa hypothetical protein
2125 CAJPQZ010000083.1 GCA_905372985.1_02125 CDS open 526-2061 1536_na     511_aa hypothetical protein
2126 CAJPQZ010000084.1 GCA_905372985.1_02126 CDS open 364-732 369_na     122_aa hypothetical protein
2127 CAJPQZ010000084.1 GCA_905372985.1_02127 CDS open 1779-3779 2001_na     666_aa hypothetical protein
2128 CAJPQZ010000085.1 GCA_905372985.1_02128 CDS open 358-603 246_na     81_aa hypothetical protein
2129 CAJPQZ010000085.1 GCA_905372985.1_02129 CDS open 733-891 159_na     52_aa hypothetical protein
2130 CAJPQZ010000085.1 GCA_905372985.1_02130 CDS open 888-2009 1122_na     373_aa hypothetical protein
2131 CAJPQZ010000085.1 GCA_905372985.1_02131 CDS open 2628-3029 402_na     133_aa hypothetical protein
2132 CAJPQZ010000085.1 GCA_905372985.1_02132 CDS open 3026-3727 702_na     233_aa xerC_5 Tyrosine recombinase XerC
2133 CAJPQZ010000086.1 GCA_905372985.1_02133 CDS open 461-1579 1119_na     372_aa hypothetical protein
2134 CAJPQZ010000086.1 GCA_905372985.1_02134 CDS open 1607-2542 936_na     311_aa hypothetical protein
2135 CAJPQZ010000086.1 GCA_905372985.1_02135 CDS open 2579-3253 675_na     224_aa hypothetical protein
2136 CAJPQZ010000087.1 GCA_905372985.1_02136 CDS open 374-3115 2742_na     913_aa hypothetical protein
2137 CAJPQZ010000087.1 GCA_905372985.1_02137 CDS open 3180-3356 177_na     58_aa hypothetical protein
2138 CAJPQZ010000088.1 GCA_905372985.1_02138 CDS open 35-391 357_na     118_aa hypothetical protein
2139 CAJPQZ010000088.1 GCA_905372985.1_02139 CDS open 526-1995 1470_na     489_aa hypothetical protein
2140 CAJPQZ010000088.1 GCA_905372985.1_02140 CDS open 2382-2684 303_na     100_aa hypothetical protein
2141 CAJPQZ010000089.1 GCA_905372985.1_02141 CDS open 36-500 465_na     154_aa hypothetical protein
2142 CAJPQZ010000089.1 GCA_905372985.1_02142 CDS open 635-1576 942_na     313_aa hypothetical protein
2143 CAJPQZ010000089.1 GCA_905372985.1_02143 CDS open 1689-2855 1167_na     388_aa hypothetical protein
2144 CAJPQZ010000090.1 GCA_905372985.1_02144 CDS open 52-2076 2025_na     674_aa nuoL NADH-quinone oxidoreductase subunit L
2145 CAJPQZ010000090.1 GCA_905372985.1_02145 CDS open 2224-2496 273_na     90_aa hypothetical protein
2146 CAJPQZ010000091.1 GCA_905372985.1_02146 CDS open 55-2514 2460_na     819_aa btuB_7 Vitamin B12 transporter BtuB
2147 CAJPQZ010000092.1 GCA_905372985.1_02147 CDS open 386-1144 759_na     252_aa ydfG NADP-dependent 3-hydroxy acid dehydrogenase YdfG
2148 CAJPQZ010000092.1 GCA_905372985.1_02148 CDS open 1245-1532 288_na     95_aa hypothetical protein
2149 CAJPQZ010000092.1 GCA_905372985.1_02149 CDS open 1514-2179 666_na     221_aa putative RNA pseudouridine synthase
2150 CAJPQZ010000092.1 GCA_905372985.1_02150 CDS open 2245-2604 360_na     119_aa fabG_2 3-oxoacyl-[acyl-carrier-protein] reductase FabG