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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Schaalia sp. HMT-172 (GCA_959028025.1)

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PROKKA Annotations for GCA_959028025.1
Genome Selected: Schaalia sp. HMT-172
ContigsBases CDSrRNA tmRNAtRNA
135 2481161 2088 2 1 45
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:5]    |    Number of Records Found: 2144 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 CAUFRB010000100.1 GCA_959028025.1_02001 CDS open 2539-3870 1332_na     443_aa hypothetical protein
2002 CAUFRB010000100.1 GCA_959028025.1_02002 CDS open 4459-7176 2718_na     905_aa ppdK Pyruvate%2C phosphate dikinase
2003 CAUFRB010000101.1 GCA_959028025.1_02003 CDS open 685-1095 411_na     136_aa hypothetical protein
2004 CAUFRB010000101.1 GCA_959028025.1_02004 CDS open 1274-2314 1041_na     346_aa ruvB Holliday junction ATP-dependent DNA helicase RuvB
2005 CAUFRB010000101.1 GCA_959028025.1_02005 CDS open 2307-2912 606_na     201_aa ruvA Holliday junction ATP-dependent DNA helicase RuvA
2006 CAUFRB010000101.1 GCA_959028025.1_02006 CDS open 2970-3599 630_na     209_aa ruvC Crossover junction endodeoxyribonuclease RuvC
2007 CAUFRB010000101.1 GCA_959028025.1_02007 CDS open 3599-4192 594_na     197_aa pdxT Pyridoxal 5-phosphate synthase subunit PdxT
2008 CAUFRB010000101.1 GCA_959028025.1_02008 CDS open 4186-5088 903_na     300_aa pdxS Pyridoxal 5-phosphate synthase subunit PdxS
2009 CAUFRB010000101.1 GCA_959028025.1_02009 CDS open 5091-5852 762_na     253_aa putative transcriptional regulatory proteinMSMEI_2866
2010 CAUFRB010000101.1 GCA_959028025.1_02010 CDS open 6001-6483 483_na     160_aa putative protein
2011 CAUFRB010000101.1 GCA_959028025.1_02011 CDS open 6516-6761 246_na     81_aa hypothetical protein
2012 CAUFRB010000102.1 GCA_959028025.1_02012 CDS open 85-2580 2496_na     831_aa hypothetical protein
2013 CAUFRB010000102.1 GCA_959028025.1_02013 CDS open 3697-4254 558_na     185_aa ISL3 family transposase ISBli30
2014 CAUFRB010000102.1 GCA_959028025.1_02014 CDS open 5359-6525 1167_na     388_aa hypothetical protein
2015 CAUFRB010000103.1 GCA_959028025.1_02015 CDS open 89-751 663_na     220_aa rpe Ribulose-phosphate 3-epimerase
2016 CAUFRB010000103.1 GCA_959028025.1_02016 CDS open 762-2234 1473_na     490_aa Putative methyltransferase
2017 CAUFRB010000103.1 GCA_959028025.1_02017 CDS open 2231-3175 945_na     314_aa fmt Methionyl-tRNA formyltransferase
2018 CAUFRB010000103.1 GCA_959028025.1_02018 CDS open 3210-5189 1980_na     659_aa priA putative primosomal protein N
2019 CAUFRB010000103.1 GCA_959028025.1_02019 CDS open 5234-5872 639_na     212_aa hypothetical protein
2020 CAUFRB010000103.1 GCA_959028025.1_02020 CDS open 5869-6573 705_na     234_aa metK S-adenosylmethionine synthase
2021 CAUFRB010000104.1 GCA_959028025.1_02021 CDS open 2-934 933_na     310_aa glcK Glucokinase
2022 CAUFRB010000104.1 GCA_959028025.1_02022 CDS open 931-2388 1458_na     485_aa hypothetical protein
2023 CAUFRB010000104.1 GCA_959028025.1_02023 CDS open 2385-3533 1149_na     382_aa nagC_2 N-acetylglucosamine repressor
2024 CAUFRB010000104.1 GCA_959028025.1_02024 CDS open 3782-5578 1797_na     598_aa cntA Metal-staphylopine-binding protein CntA
2025 CAUFRB010000105.1 GCA_959028025.1_02025 CDS open 38-388 351_na     116_aa araQ_2 L-arabinose transport system permease protein AraQ
2026 CAUFRB010000105.1 GCA_959028025.1_02026 CDS open 388-1785 1398_na     465_aa hypothetical protein
2027 CAUFRB010000105.1 GCA_959028025.1_02027 CDS open 1886-2812 927_na     308_aa hypothetical protein
2028 CAUFRB010000105.1 GCA_959028025.1_02028 CDS open 2908-3204 297_na     98_aa hypothetical protein
2029 CAUFRB010000105.1 GCA_959028025.1_02029 CDS open 3201-3590 390_na     129_aa hypothetical protein
2030 CAUFRB010000105.1 GCA_959028025.1_02030 CDS open 3675-5042 1368_na     455_aa hypothetical protein
2031 CAUFRB010000105.1 GCA_959028025.1_02031 CDS open 5178-5429 252_na     83_aa hypothetical protein
2032 CAUFRB010000105.1 GCA_959028025.1_02032 CDS open 5555-6115 561_na     186_aa iolE Inosose dehydratase
2033 CAUFRB010000106.1 GCA_959028025.1_02033 CDS open 304-1851 1548_na     515_aa hypothetical protein
2034 CAUFRB010000106.1 GCA_959028025.1_02034 CDS open 1937-2983 1047_na     348_aa hypothetical protein
2035 CAUFRB010000106.1 GCA_959028025.1_02035 CDS open 2980-4593 1614_na     537_aa hypothetical protein
2036 CAUFRB010000106.1 GCA_959028025.1_02036 CDS open 4677-5270 594_na     197_aa hypothetical protein
2037 CAUFRB010000107.1 GCA_959028025.1_02037 CDS open 315-500 186_na     61_aa hypothetical protein
2038 CAUFRB010000107.1 GCA_959028025.1_02038 CDS open 751-1215 465_na     154_aa hypothetical protein
2039 CAUFRB010000107.1 GCA_959028025.1_02039 CDS open 2038-2637 600_na     199_aa hypothetical protein
2040 CAUFRB010000107.1 GCA_959028025.1_02040 CDS open 2800-4272 1473_na     490_aa cycA D-serineD-alanineglycine transporter
2041 CAUFRB010000107.1 misc_RNA open 4301-4402 TPP
2042 CAUFRB010000107.1 GCA_959028025.1_02042 CDS open 4433-5032 600_na     199_aa ykoE Putative HMPthiamine permease protein YkoE
2043 CAUFRB010000108.1 GCA_959028025.1_02043 CDS open 279-2303 2025_na     674_aa hypothetical protein
2044 CAUFRB010000108.1 GCA_959028025.1_02044 CDS open 2658-3575 918_na     305_aa hypothetical protein
2045 CAUFRB010000108.1 GCA_959028025.1_02045 CDS open 3585-4385 801_na     266_aa soj Sporulation initiation inhibitor protein Soj
2046 CAUFRB010000108.1 GCA_959028025.1_02046 CDS open 4382-4759 378_na     125_aa hypothetical protein
2047 CAUFRB010000109.1 GCA_959028025.1_02047 CDS open 293-1225 933_na     310_aa hypothetical protein
2048 CAUFRB010000109.1 GCA_959028025.1_02048 CDS open 2694-2942 249_na     82_aa nrdH Glutaredoxin-like protein NrdH
2049 CAUFRB010000109.1 GCA_959028025.1_02049 CDS open 3245-3661 417_na     138_aa nrdI Protein NrdI
2050 CAUFRB010000109.1 GCA_959028025.1_02050 CDS open 3514-5094 1581_na     526_aa hypothetical protein
2051 CAUFRB010000109.1 GCA_959028025.1_02051 CDS open 5094-5468 375_na     124_aa hypothetical protein
2052 CAUFRB010000110.1 GCA_959028025.1_02052 CDS open 217-4119 3903_na     1300_aa rpoC DNA-directed RNA polymerase subunit beta
2053 CAUFRB010000110.1 GCA_959028025.1_02053 CDS open 4135-5175 1041_na     346_aa rpoB DNA-directed RNA polymerase subunit beta
2054 CAUFRB010000111.1 GCA_959028025.1_02054 CDS open 41-757 717_na     238_aa hypothetical protein
2055 CAUFRB010000111.1 GCA_959028025.1_02055 CDS open 750-1598 849_na     282_aa hypothetical protein
2056 CAUFRB010000111.1 GCA_959028025.1_02056 CDS open 2410-2718 309_na     102_aa ybaQ putative HTH-type transcriptional regulator YbaQ
2057 CAUFRB010000111.1 GCA_959028025.1_02057 CDS open 2978-3625 648_na     215_aa hypothetical protein
2058 CAUFRB010000111.1 GCA_959028025.1_02058 CDS open 3639-4187 549_na     182_aa hypothetical protein
2059 CAUFRB010000111.1 GCA_959028025.1_02059 CDS open 4184-4597 414_na     137_aa hypothetical protein
2060 CAUFRB010000111.1 GCA_959028025.1_02060 CDS open 4603-4779 177_na     58_aa hypothetical protein
2061 CAUFRB010000111.1 GCA_959028025.1_02061 CDS open 4812-5255 444_na     147_aa hypothetical protein
2062 CAUFRB010000112.1 GCA_959028025.1_02062 CDS open 1163-2233 1071_na     356_aa hypothetical protein
2063 CAUFRB010000112.1 GCA_959028025.1_02063 CDS open 2334-2873 540_na     179_aa apt Adenine phosphoribosyltransferase
2064 CAUFRB010000112.1 GCA_959028025.1_02064 CDS open 2870-3958 1089_na     362_aa secF Protein translocase subunit SecF
2065 CAUFRB010000112.1 GCA_959028025.1_02065 CDS open 3960-5123 1164_na     387_aa secD Protein translocase subunit SecD
2066 CAUFRB010000113.1 GCA_959028025.1_02066 CDS open 178-2934 2757_na     918_aa hypothetical protein
2067 CAUFRB010000113.1 GCA_959028025.1_02067 CDS open 3552-4442 891_na     296_aa hypothetical protein
2068 CAUFRB010000114.1 GCA_959028025.1_02068 CDS open 10-306 297_na     98_aa ansP2 L-asparagine permease 2
2069 CAUFRB010000114.1 GCA_959028025.1_02069 CDS open 322-1320 999_na     332_aa ansA L-asparaginase 1
2070 CAUFRB010000114.1 GCA_959028025.1_02070 CDS open 1441-2955 1515_na     504_aa pepPI Xaa-Pro aminopeptidase 1
2071 CAUFRB010000114.1 GCA_959028025.1_02071 CDS open 2995-3795 801_na     266_aa hypothetical protein
2072 CAUFRB010000114.1 GCA_959028025.1_02072 CDS open 4006-4479 474_na     157_aa hypothetical protein
2073 CAUFRB010000115.1 GCA_959028025.1_02073 CDS open 5-139 135_na     44_aa nrdE Ribonucleoside-diphosphate reductase subunit alpha
2074 CAUFRB010000115.1 GCA_959028025.1_02074 CDS open 374-934 561_na     186_aa hypothetical protein
2075 CAUFRB010000115.1 GCA_959028025.1_02075 CDS open 965-1849 885_na     294_aa hypothetical protein
2076 CAUFRB010000115.1 GCA_959028025.1_02076 CDS open 1962-2435 474_na     157_aa hypothetical protein
2077 CAUFRB010000115.1 GCA_959028025.1_02077 CDS open 2551-3117 567_na     188_aa hypothetical protein
2078 CAUFRB010000115.1 GCA_959028025.1_02078 CDS open 3105-4064 960_na     319_aa hypothetical protein
2079 CAUFRB010000115.1 GCA_959028025.1_02079 CDS open 4058-4297 240_na     79_aa hypothetical protein
2080 CAUFRB010000116.1 GCA_959028025.1_02080 CDS open 27-1532 1506_na     501_aa nuoM NADH-quinone oxidoreductase subunit M
2081 CAUFRB010000116.1 GCA_959028025.1_02081 CDS open 1529-3097 1569_na     522_aa nuoN NADH-quinone oxidoreductase subunit N
2082 CAUFRB010000116.1 GCA_959028025.1_02082 CDS open 3094-4107 1014_na     337_aa hepT Heptaprenyl diphosphate synthase component 2
2083 CAUFRB010000117.1 GCA_959028025.1_02083 CDS open 131-1393 1263_na     420_aa tyrS Tyrosine--tRNA ligase
2084 CAUFRB010000117.1 GCA_959028025.1_02084 CDS open 1465-2892 1428_na     475_aa argH Argininosuccinate lyase
2085 CAUFRB010000117.1 GCA_959028025.1_02085 CDS open 2934-4292 1359_na     452_aa hypothetical protein
2086 CAUFRB010000118.1 GCA_959028025.1_02086 CDS open 31-795 765_na     254_aa hypothetical protein
2087 CAUFRB010000118.1 GCA_959028025.1_02087 CDS open 968-2773 1806_na     601_aa pmt putative dolichyl-phosphate-mannose--protein mannosyltransferase
2088 CAUFRB010000118.1 GCA_959028025.1_02088 CDS open 2919-3443 525_na     174_aa hypothetical protein
2089 CAUFRB010000118.1 rRNA open 4028-4137 5S ribosomal RNA
2090 CAUFRB010000119.1 GCA_959028025.1_02090 CDS open 132-554 423_na     140_aa hypothetical protein
2091 CAUFRB010000119.1 GCA_959028025.1_02091 CDS open 871-1293 423_na     140_aa hypothetical protein
2092 CAUFRB010000119.1 GCA_959028025.1_02092 CDS open 2145-3935 1791_na     596_aa CARKD ATP-dependent (S)-NAD(P)H-hydrate dehydratase
2093 CAUFRB010000119.1 GCA_959028025.1_02093 CDS open 4038-4418 381_na     126_aa hypothetical protein
2094 CAUFRB010000120.1 GCA_959028025.1_02094 CDS open 443-1357 915_na     304_aa mntB_2 Manganese transport system membrane protein MntB
2095 CAUFRB010000120.1 GCA_959028025.1_02095 CDS open 1354-2073 720_na     239_aa mntB_3 Manganese transport system ATP-binding protein MntB
2096 CAUFRB010000120.1 GCA_959028025.1_02096 CDS open 2070-3236 1167_na     388_aa hypothetical protein
2097 CAUFRB010000120.1 GCA_959028025.1_02097 CDS open 3707-4192 486_na     161_aa troA Periplasmic zinc-binding protein TroA
2098 CAUFRB010000121.1 GCA_959028025.1_02098 CDS open 12-839 828_na     275_aa hypothetical protein
2099 CAUFRB010000121.1 GCA_959028025.1_02099 CDS open 887-1837 951_na     316_aa hypothetical protein
2100 CAUFRB010000121.1 GCA_959028025.1_02100 CDS open 2003-2959 957_na     318_aa hypothetical protein
2101 CAUFRB010000122.1 GCA_959028025.1_02101 CDS open 410-2149 1740_na     579_aa dipZ_2 Protein DipZ
2102 CAUFRB010000122.1 GCA_959028025.1_02102 CDS open 2253-2813 561_na     186_aa sigK ECF RNA polymerase sigma factor SigK
2103 CAUFRB010000122.1 GCA_959028025.1_02103 CDS open 3256-3432 177_na     58_aa hypothetical protein
2104 CAUFRB010000123.1 GCA_959028025.1_02104 CDS open 936-1541 606_na     201_aa hypothetical protein
2105 CAUFRB010000123.1 GCA_959028025.1_02105 CDS open 1758-2981 1224_na     407_aa hypothetical protein
2106 CAUFRB010000123.1 GCA_959028025.1_02106 CDS open 3099-3446 348_na     115_aa hypothetical protein
2107 CAUFRB010000124.1 GCA_959028025.1_02107 CDS open 100-273 174_na     57_aa tuf Elongation factor Tu
2108 CAUFRB010000124.1 GCA_959028025.1_02108 CDS open 874-1182 309_na     102_aa rpsJ 30S ribosomal protein S10
2109 CAUFRB010000124.1 GCA_959028025.1_02109 CDS open 1194-1859 666_na     221_aa rplC 50S ribosomal protein L3
2110 CAUFRB010000124.1 GCA_959028025.1_02110 CDS open 1862-2506 645_na     214_aa rplD 50S ribosomal protein L4
2111 CAUFRB010000124.1 GCA_959028025.1_02111 CDS open 2503-2808 306_na     101_aa rplW 50S ribosomal protein L23
2112 CAUFRB010000125.1 GCA_959028025.1_02112 CDS open 926-2845 1920_na     639_aa hypothetical protein
2113 CAUFRB010000126.1 GCA_959028025.1_02113 CDS open 34-951 918_na     305_aa hypothetical protein
2114 CAUFRB010000126.1 GCA_959028025.1_02114 CDS open 1209-3179 1971_na     656_aa hypothetical protein
2115 CAUFRB010000127.1 GCA_959028025.1_02115 CDS open 34-1326 1293_na     430_aa pyk Pyruvate kinase
2116 CAUFRB010000127.1 GCA_959028025.1_02116 CDS open 1572-1787 216_na     71_aa hypothetical protein
2117 CAUFRB010000127.1 tRNA open 1921-1996 tRNA-Leu(caa)
2118 CAUFRB010000127.1 GCA_959028025.1_02118 CDS open 2061-2651 591_na     196_aa pdtaR putative transcriptional regulatory protein pdtaR
2119 CAUFRB010000128.1 GCA_959028025.1_02119 CDS open 206-397 192_na     63_aa hypothetical protein
2120 CAUFRB010000128.1 GCA_959028025.1_02120 CDS open 780-935 156_na     51_aa hypothetical protein
2121 CAUFRB010000128.1 GCA_959028025.1_02121 CDS open 932-2227 1296_na     431_aa hypothetical protein
2122 CAUFRB010000128.1 rRNA open 2701-2810 5S ribosomal RNA
2123 CAUFRB010000129.1 GCA_959028025.1_02123 CDS open 13-519 507_na     168_aa hypothetical protein
2124 CAUFRB010000129.1 GCA_959028025.1_02124 CDS open 516-1583 1068_na     355_aa hypothetical protein
2125 CAUFRB010000129.1 GCA_959028025.1_02125 CDS open 1583-2866 1284_na     427_aa hypothetical protein
2126 CAUFRB010000130.1 GCA_959028025.1_02126 CDS open 133-399 267_na     88_aa rpsQ 30S ribosomal protein S17
2127 CAUFRB010000130.1 GCA_959028025.1_02127 CDS open 405-638 234_na     77_aa rpmC 50S ribosomal protein L29
2128 CAUFRB010000130.1 GCA_959028025.1_02128 CDS open 638-1057 420_na     139_aa rplP 50S ribosomal protein L16
2129 CAUFRB010000130.1 GCA_959028025.1_02129 CDS open 1063-1872 810_na     269_aa rpsC 30S ribosomal protein S3
2130 CAUFRB010000130.1 GCA_959028025.1_02130 CDS open 1874-2245 372_na     123_aa rplV 50S ribosomal protein L22
2131 CAUFRB010000130.1 GCA_959028025.1_02131 CDS open 2275-2556 282_na     93_aa rpsS 30S ribosomal protein S19
2132 CAUFRB010000130.1 GCA_959028025.1_02132 CDS open 2573-2881 309_na     102_aa rplB 50S ribosomal protein L2
2133 CAUFRB010000131.1 GCA_959028025.1_02133 CDS open 531-830 300_na     99_aa hypothetical protein
2134 CAUFRB010000131.1 GCA_959028025.1_02134 CDS open 827-1366 540_na     179_aa sigH ECF RNA polymerase sigma factor SigH
2135 CAUFRB010000131.1 GCA_959028025.1_02135 CDS open 1672-2199 528_na     175_aa hypothetical protein
2136 CAUFRB010000132.1 GCA_959028025.1_02136 CDS open 10-168 159_na     52_aa hypothetical protein
2137 CAUFRB010000132.1 GCA_959028025.1_02137 CDS open 176-1135 960_na     319_aa occM Octopine transport system permease protein OccM
2138 CAUFRB010000132.1 GCA_959028025.1_02138 CDS open 1132-1929 798_na     265_aa glnQ_2 Glutamine transport ATP-binding protein GlnQ
2139 CAUFRB010000132.1 GCA_959028025.1_02139 CDS open 1994-2623 630_na     209_aa ybiT putative ABC transporter ATP-binding protein YbiT
2140 CAUFRB010000133.1 GCA_959028025.1_02140 CDS open 456-1703 1248_na     415_aa hypothetical protein
2141 CAUFRB010000134.1 GCA_959028025.1_02141 CDS open 300-1022 723_na     240_aa cnbA Chloronitrobenzene nitroreductase
2142 CAUFRB010000134.1 GCA_959028025.1_02142 CDS open 1092-2141 1050_na     349_aa hypothetical protein
2143 CAUFRB010000135.1 GCA_959028025.1_02143 CDS open 147-452 306_na     101_aa hypothetical protein
2144 CAUFRB010000135.1 GCA_959028025.1_02144 CDS open 449-2095 1647_na     548_aa cdr Coenzyme A disulfide reductase