Genome Meta Information: Staphylococcus aureus type strain:ST398 (GCA_000009585.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000009585.1 | ||
| HOMD Taxon-ID | HMT-0550 | ||
| Species Name (in use by HOMD) | Staphylococcus aureus | ||
| Organism Name (as deposited) | HMT-550 Staphylococcus aureus type strain | ||
| Strain or Isolate | type strain:ST398 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus aureus |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,885,367 (bp) | ||
| GC Percentage | 32.91 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/585/GCA_000009585.1_ASM958v1 | ||
| CDS | 2689 | ||
| Genes | 2884 | ||
| mRNA | 2884 | ||
| misc RNA | 114 | ||
| rRNA | 19 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.58 % | ||
| CheckM Completeness | 98.2 % | ||
| CheckM Contamination | 0.39 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM958v1 |
| GenBank Assembly Accession | GCA_000009585.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000009585.1 [NCBI] |
| BioSample | SAMEA2272644 [NCBI] |
| BioProject | PRJEA29427 [NCBI] |
| Submitter | University Medical Centre Utrecht |
| Submission Date | 2013-12-20T12:43:46.800 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 523796 |
| Isolation Source | |
| Geo Location | |
