Genome Meta Information: Mesorhizobium japonicum MAFF 303099 (GCA_000009625.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000009625.1 | ||
| HOMD Taxon-ID | HMT-0659 | ||
| Species Name (in use by HOMD) | Mesorhizobium japonicum | ||
| Organism Name (as deposited) | HMT-659 Mesorhizobium japonicum MAFF 303099 | ||
| Strain or Isolate | MAFF 303099 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium; s__Mesorhizobium japonicum |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 7,596,297 (bp) | ||
| GC Percentage | 62.51 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/625/GCA_000009625.1_ASM962v1 | ||
| CDS | 7373 | ||
| Genes | 7435 | ||
| mRNA | 0 | ||
| misc RNA | 0 | ||
| rRNA | 6 | ||
| tRNA | 55 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.48 % | ||
| CheckM Contamination | 0.28 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM962v1 |
| GenBank Assembly Accession | GCA_000009625.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000009625.1 [NCBI] |
| BioSample | SAMD00061086 [NCBI] |
| BioProject | PRJNA18 [NCBI] |
| Submitter | Kazusa |
| Submission Date | 2016-09-28T01:02:38.973 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 266835 |
| Isolation Source | |
| Geo Location | |
