Genome Meta Information: Limosilactobacillus reuteri JCM 1112 (GCA_000010005.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000010005.1 | ||
| HOMD Taxon-ID | HMT-0818 | ||
| Species Name (in use by HOMD) | Limosilactobacillus reuteri | ||
| Organism Name (as deposited) | HMT-818 Limosilactobacillus reuteri JCM 1112 | ||
| Strain or Isolate | JCM 1112 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Limosilactobacillus; s__Limosilactobacillus reuteri |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,039,414 (bp) | ||
| GC Percentage | 38.88 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/005/GCA_000010005.1_ASM1000v1 | ||
| CDS | 2020 | ||
| Genes | 2175 | ||
| mRNA | 2175 | ||
| misc RNA | 71 | ||
| rRNA | 18 | ||
| tRNA | 65 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.42 % | ||
| CheckM Contamination | 0.65 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1000v1 |
| GenBank Assembly Accession | GCA_000010005.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000010005.1 [NCBI] |
| BioSample | SAMD00060920 [NCBI] |
| BioProject | PRJDA19011 [NCBI] |
| Submitter | Kitasato Institute for Life Sciences |
| Submission Date | 2016-09-28T01:00:28.206 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 557433 |
| Isolation Source | |
| Geo Location | |
