Genome Meta Information: Lactobacillus gasseri ATCC 33323 (GCA_000014425.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000014425.1 | ||
| HOMD Taxon-ID | HMT-0615 | ||
| Species Name (in use by HOMD) | Lactobacillus gasseri | ||
| Organism Name (as deposited) | HMT-615 Lactobacillus gasseri ATCC 33323 | ||
| Strain or Isolate | ATCC 33323 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus; s__Lactobacillus gasseri |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 1,894,360 (bp) | ||
| GC Percentage | 35.26 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/425/GCA_000014425.1_ASM1442v1 | ||
| CDS | 1808 | ||
| Genes | 1939 | ||
| mRNA | 1939 | ||
| misc RNA | 34 | ||
| rRNA | 18 | ||
| tRNA | 78 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 99.5 % | ||
| CheckM Contamination | 0.27 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1442v1 |
| GenBank Assembly Accession | GCA_000014425.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000014425.1 [NCBI] |
| BioSample | SAMN02598542 [NCBI] |
| BioProject | PRJNA84 [NCBI] |
| Submitter | US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc. |
| Submission Date | 2014-01-28T10:41:20.450 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 324831 |
| Isolation Source | |
| Geo Location | |
