Genome Meta Information: Campylobacter concisus 13826 (GCA_000017725.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000017725.2 | ||
| HOMD Taxon-ID | HMT-0433 | ||
| Species Name (in use by HOMD) | Campylobacter concisus | ||
| Organism Name (as deposited) | HMT-433 Campylobacter concisus clade-433 13826 | ||
| Strain or Isolate | 13826 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter_A; s__Campylobacter_A concisus_AB |
||
| Sequencing Technology | Sanger dideoxy sequencing; Illumina | ||
| Genome Coverage | 207 | ||
| Contigs |
|
||
| Total Sequence Length | 2,099,413 (bp) | ||
| GC Percentage | 39.27 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/725/GCA_000017725.2_ASM1772v2 | ||
| CDS | 2072 | ||
| Genes | 2130 | ||
| mRNA | 0 | ||
| misc RNA | 4 | ||
| rRNA | 6 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 88.63 % | ||
| CheckM Completeness | 99.2 % | ||
| CheckM Contamination | 0.13 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1772v2 |
| GenBank Assembly Accession | GCA_000017725.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000017725.2 [NCBI] |
| BioSample | SAMN02604054 [NCBI] |
| BioProject | PRJNA17159 [NCBI] |
| Submitter | TIGR |
| Submission Date | 2014-01-30T14:54:19.100 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 360104 |
| Isolation Source | |
| Geo Location | |
