Genome Meta Information: Leptotrichia buccalis DSM 1135 (GCA_000023905.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000023905.1 | ||
| HOMD Taxon-ID | HMT-0563 | ||
| Species Name (in use by HOMD) | Leptotrichia buccalis | ||
| Organism Name (as deposited) | HMT-563 Leptotrichia buccalis DSM 1135 | ||
| Strain or Isolate | DSM 1135 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Leptotrichiaceae;g__Leptotrichia; s__Leptotrichia buccalis |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,465,610 (bp) | ||
| GC Percentage | 29.65 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/905/GCA_000023905.1_ASM2390v1 | ||
| CDS | 2298 | ||
| Genes | 2405 | ||
| mRNA | 2405 | ||
| misc RNA | 45 | ||
| rRNA | 15 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.7 % | ||
| CheckM Contamination | 0.22 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2390v1 |
| GenBank Assembly Accession | GCA_000023905.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000023905.1 [NCBI] |
| BioSample | SAMN00002593 [NCBI] |
| BioProject | PRJNA29445 [NCBI] |
| Submitter | US DOE Joint Genome Institute (JGI-PGF) |
| Submission Date | 2009-06-24T12:11:02.376 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 523794 |
| Isolation Source | |
| Geo Location | |
