Genome Meta Information: Lacticaseibacillus rhamnosus Lc 705 (GCA_000026525.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000026525.1 | ||
| HOMD Taxon-ID | HMT-0749 | ||
| Species Name (in use by HOMD) | Lacticaseibacillus rhamnosus | ||
| Organism Name (as deposited) | HMT-749 Lacticaseibacillus rhamnosus Lc 705 | ||
| Strain or Isolate | Lc 705 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lacticaseibacillus; s__Lacticaseibacillus rhamnosus |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 3,033,106 (bp) | ||
| GC Percentage | 46.68 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/525/GCA_000026525.1_ASM2652v1 | ||
| CDS | 2857 | ||
| Genes | 2971 | ||
| mRNA | 2971 | ||
| misc RNA | 37 | ||
| rRNA | 15 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.91 % | ||
| CheckM Completeness | 97.87 % | ||
| CheckM Contamination | 0.45 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2652v1 |
| GenBank Assembly Accession | GCA_000026525.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000026525.1 [NCBI] |
| BioSample | SAMEA2272728 [NCBI] |
| BioProject | PRJEA32197 [NCBI] |
| Submitter | Institute of Biotechnology, University of Helsinki, Finland |
| Submission Date | 2013-12-20T12:43:55.770 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 568704 |
| Isolation Source | |
| Geo Location | |
