Genome Meta Information: Neisseria meningitidis alpha14 (GCA_000083565.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000083565.1 | ||
| HOMD Taxon-ID | HMT-0669 | ||
| Species Name (in use by HOMD) | Neisseria meningitidis | ||
| Organism Name (as deposited) | HMT-669 Neisseria meningitidis alpha14 | ||
| Strain or Isolate | alpha14 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria meningitidis |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,145,295 (bp) | ||
| GC Percentage | 51.95 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/083/565/GCA_000083565.1_ASM8356v1 | ||
| CDS | 1973 | ||
| Genes | 2068 | ||
| mRNA | 2068 | ||
| misc RNA | 23 | ||
| rRNA | 12 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.3 % | ||
| CheckM Completeness | 99.39 % | ||
| CheckM Contamination | 0.39 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM8356v1 |
| GenBank Assembly Accession | GCA_000083565.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000083565.1 [NCBI] |
| BioSample | SAMEA3138289 [NCBI] |
| BioProject | PRJNA39689 [NCBI] |
| Submitter | Bielefeld University |
| Submission Date | 2014-11-21T08:58:30.847 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 662598 |
| Isolation Source | |
| Geo Location | |
