Genome Meta Information: Neisseria oralis F0314 (GCA_000090875.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000090875.1 | ||
| HOMD Taxon-ID | HMT-0014 | ||
| Species Name (in use by HOMD) | Neisseria oralis | ||
| Organism Name (as deposited) | HMT-014 Neisseria oralis F0314 | ||
| Strain or Isolate | F0314 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria oralis |
||
| Sequencing Technology | |||
| Genome Coverage | 39.2 | ||
| Contigs |
|
||
| Total Sequence Length | 2,515,760 (bp) | ||
| GC Percentage | 53.08 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/090/875/GCA_000090875.1_ASM9087v1 | ||
| CDS | 2331 | ||
| Genes | 2494 | ||
| mRNA | 2494 | ||
| misc RNA | 102 | ||
| rRNA | 3 | ||
| tRNA | 57 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.04 % | ||
| CheckM Contamination | 0.68 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM9087v1 |
| GenBank Assembly Accession | GCA_000090875.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000090875.1 [NCBI] |
| BioSample | SAMN02463843 [NCBI] |
| BioProject | PRJNA42547 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:45.620 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ADEA01 |
| NCBI TaxID | 641149 |
| Isolation Source | missing |
| Geo Location | not determined |
