Genome Meta Information: Segatella oris C735 (GCA_000142965.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000142965.1 | ||
| HOMD Taxon-ID | HMT-0311 | ||
| Species Name (in use by HOMD) | Segatella oris | ||
| Organism Name (as deposited) | HMT-311 Segatella oris C735 | ||
| Strain or Isolate | C735 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella oris |
||
| Sequencing Technology | |||
| Genome Coverage | 14.28 | ||
| Contigs |
|
||
| Total Sequence Length | 3,346,228 (bp) | ||
| GC Percentage | 44.32 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/142/965/GCA_000142965.1_ASM14296v1 | ||
| CDS | 2946 | ||
| Genes | 3014 | ||
| mRNA | 3014 | ||
| misc RNA | 8 | ||
| rRNA | 8 | ||
| tRNA | 50 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | 97.52 % | ||
| CheckM Completeness | 99.08 % | ||
| CheckM Contamination | 3.68 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM14296v1 |
| GenBank Assembly Accession | GCA_000142965.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000142965.1 [NCBI] |
| BioSample | SAMN02463839 [NCBI] |
| BioProject | PRJNA42537 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:45.200 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ADDV01 |
| NCBI TaxID | 563008 |
| Isolation Source | missing |
| Geo Location | not determined |
