Genome Meta Information: Lactiplantibacillus plantarum ATCC 14917 (GCA_000143745.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000143745.1 | ||
| HOMD Taxon-ID | HMT-0861 | ||
| Species Name (in use by HOMD) | Lactiplantibacillus plantarum | ||
| Organism Name (as deposited) | HMT-861 Lactiplantibacillus plantarum ATCC 14917 | ||
| Strain or Isolate | ATCC 14917 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactiplantibacillus; s__Lactiplantibacillus plantarum |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 36 | ||
| Contigs |
|
||
| Total Sequence Length | 3,212,261 (bp) | ||
| GC Percentage | 44.71 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/745/GCA_000143745.1_ASM14374v1 | ||
| CDS | 2999 | ||
| Genes | 3061 | ||
| mRNA | 0 | ||
| misc RNA | 0 | ||
| rRNA | 2 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.02 % | ||
| CheckM Contamination | 1.39 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM14374v1 |
| GenBank Assembly Accession | GCA_000143745.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000143745.1 [NCBI] |
| BioSample | SAMN00001478 [NCBI] |
| BioProject | PRJNA31515 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2009-01-08T15:54:02.326 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACGZ02 |
| NCBI TaxID | 525338 |
| Isolation Source | missing |
| Geo Location | not determined |
