Genome Meta Information: Prevotella melaninogenica ATCC 25845 (GCA_000144405.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000144405.1 | ||
| HOMD Taxon-ID | HMT-0469 | ||
| Species Name (in use by HOMD) | Prevotella melaninogenica | ||
| Organism Name (as deposited) | HMT-469 Prevotella melaninogenica ATCC 25845 | ||
| Strain or Isolate | ATCC 25845 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella melaninogenica |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 14.1 | ||
| Contigs |
|
||
| Total Sequence Length | 3,168,282 (bp) | ||
| GC Percentage | 40.98 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/405/GCA_000144405.1_ASM14440v1 | ||
| CDS | 2460 | ||
| Genes | 2535 | ||
| mRNA | 2535 | ||
| misc RNA | 9 | ||
| rRNA | 13 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.52 % | ||
| CheckM Contamination | 0.7 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM14440v1 |
| GenBank Assembly Accession | GCA_000144405.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000144405.1 [NCBI] |
| BioSample | SAMN00001916 [NCBI] |
| BioProject | PRJNA31383 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2009-02-24T11:35:04.710 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 553174 |
| Isolation Source | |
| Geo Location | not determined |
