Genome Meta Information: Lactobacillus jensenii 1153 (GCA_000155915.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000155915.2 | ||
| HOMD Taxon-ID | HMT-0839 | ||
| Species Name (in use by HOMD) | Lactobacillus jensenii | ||
| Organism Name (as deposited) | HMT-839 Lactobacillus jensenii 1153 | ||
| Strain or Isolate | 1153 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus; s__Lactobacillus jensenii |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 54.63 | ||
| Contigs |
|
||
| Total Sequence Length | 1,746,219 (bp) | ||
| GC Percentage | 34.86 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/915/GCA_000155915.2_Lacto_jensenii_1153_V2 | ||
| CDS | 1893 | ||
| Genes | 1973 | ||
| mRNA | 1973 | ||
| misc RNA | 19 | ||
| rRNA | 7 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.87 % | ||
| CheckM Completeness | 79.03 % | ||
| CheckM Contamination | 0.86 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Lacto_jensenii_1153_V2 |
| GenBank Assembly Accession | GCA_000155915.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000155915.2 [NCBI] |
| BioSample | SAMN02463685 [NCBI] |
| BioProject | PRJNA31205 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:26.153 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ABWG02 |
| NCBI TaxID | 440497 |
| Isolation Source | missing |
| Geo Location | not determined |
