Genome Meta Information: Bifidobacterium breve DSM 20213 (GCA_000158015.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000158015.1 | ||
| HOMD Taxon-ID | HMT-0889 | ||
| Species Name (in use by HOMD) | Bifidobacterium breve | ||
| Organism Name (as deposited) | HMT-889 Bifidobacterium breve DSM 20213 | ||
| Strain or Isolate | DSM 20213 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium; s__Bifidobacterium breve |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,331,386 (bp) | ||
| GC Percentage | 58.49 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/015/GCA_000158015.1_ASM15801v1 | ||
| CDS | 1953 | ||
| Genes | 2023 | ||
| mRNA | 2023 | ||
| misc RNA | 12 | ||
| rRNA | 3 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.71 % | ||
| CheckM Contamination | 0.27 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM15801v1 |
| GenBank Assembly Accession | GCA_000158015.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000158015.1 [NCBI] |
| BioSample | SAMN00008778 [NCBI] |
| BioProject | PRJNA29259 [NCBI] |
| Submitter | Washington University Genome Sequencing Center |
| Submission Date | 2010-02-19T17:31:07.240 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACCG02 |
| NCBI TaxID | 518634 |
| Isolation Source | missing |
| Geo Location | not determined |
