Genome Meta Information: Fusobacterium necrophorum D12 (GCA_000158295.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000158295.2 | ||
| HOMD Taxon-ID | HMT-0690 | ||
| Species Name (in use by HOMD) | Fusobacterium necrophorum | ||
| Organism Name (as deposited) | HMT-690 Fusobacterium necrophorum D12 | ||
| Strain or Isolate | D12 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium_C; s__Fusobacterium_C necrophorum |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 15 | ||
| Contigs |
|
||
| Total Sequence Length | 1,960,925 (bp) | ||
| GC Percentage | 35.53 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/295/GCA_000158295.2_Fuso_sp_D12_V2 | ||
| CDS | 1919 | ||
| Genes | 1991 | ||
| mRNA | 1991 | ||
| misc RNA | 17 | ||
| rRNA | 6 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.62 % | ||
| CheckM Completeness | 84.69 % | ||
| CheckM Contamination | 1.88 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Fuso_sp_D12_V2 |
| GenBank Assembly Accession | GCA_000158295.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000158295.2 [NCBI] |
| BioSample | SAMN02463712 [NCBI] |
| BioProject | PRJNA32485 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:29.750 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACDG02 |
| NCBI TaxID | 556263 |
| Isolation Source | missing |
| Geo Location | not determined |
