Genome Meta Information: Lactobacillus ultunensis DSM 16047 (GCA_000159415.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000159415.1 | ||
| HOMD Taxon-ID | HMT-0461 | ||
| Species Name (in use by HOMD) | Lactobacillus ultunensis | ||
| Organism Name (as deposited) | HMT-461 Lactobacillus ultunensis DSM 16047 | ||
| Strain or Isolate | DSM 16047 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus; s__Lactobacillus ultunensis |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,248,406 (bp) | ||
| GC Percentage | 38.27 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/415/GCA_000159415.1_ASM15941v1 | ||
| CDS | 2117 | ||
| Genes | 2215 | ||
| mRNA | 2215 | ||
| misc RNA | 37 | ||
| rRNA | 3 | ||
| tRNA | 57 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.97 % | ||
| CheckM Completeness | 98.23 % | ||
| CheckM Contamination | 0.81 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM15941v1 |
| GenBank Assembly Accession | GCA_000159415.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000159415.1 [NCBI] |
| BioSample | SAMN00001484 [NCBI] |
| BioProject | PRJNA31505 [NCBI] |
| Submitter | BCM |
| Submission Date | 2009-01-09T12:39:02.370 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACGU01 |
| NCBI TaxID | 525365 |
| Isolation Source | missing |
| Geo Location | not determined |
